CA2426121A1 - Atropisomers of asymmetric xanthene fluorescent dyes and methods of dna sequencing and fragment analysis - Google Patents

Atropisomers of asymmetric xanthene fluorescent dyes and methods of dna sequencing and fragment analysis Download PDF

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Publication number
CA2426121A1
CA2426121A1 CA002426121A CA2426121A CA2426121A1 CA 2426121 A1 CA2426121 A1 CA 2426121A1 CA 002426121 A CA002426121 A CA 002426121A CA 2426121 A CA2426121 A CA 2426121A CA 2426121 A1 CA2426121 A1 CA 2426121A1
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Canada
Prior art keywords
dye
compound
labelled
polynucleotide
energy
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Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
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CA002426121A
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English (en)
French (fr)
Inventor
Linda G. Lee
Meng C. Taing
Barnett B. Rosenblum
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Individual
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Applera Corp
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Application filed by Applera Corp filed Critical Applera Corp
Publication of CA2426121A1 publication Critical patent/CA2426121A1/en
Abandoned legal-status Critical Current

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07HSUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H19/00Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
    • C07H19/02Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
    • C07H19/04Heterocyclic radicals containing only nitrogen atoms as ring hetero atom
    • C07H19/06Pyrimidine radicals
    • C07H19/10Pyrimidine radicals with the saccharide radical esterified by phosphoric or polyphosphoric acids
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07HSUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H19/00Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
    • C07H19/02Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
    • C07H19/04Heterocyclic radicals containing only nitrogen atoms as ring hetero atom
    • C07H19/16Purine radicals
    • C07H19/20Purine radicals with the saccharide radical esterified by phosphoric or polyphosphoric acids
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07HSUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H21/00Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07HSUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H21/00Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
    • C07H21/04Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids with deoxyribosyl as saccharide radical
    • CCHEMISTRY; METALLURGY
    • C09DYES; PAINTS; POLISHES; NATURAL RESINS; ADHESIVES; COMPOSITIONS NOT OTHERWISE PROVIDED FOR; APPLICATIONS OF MATERIALS NOT OTHERWISE PROVIDED FOR
    • C09BORGANIC DYES OR CLOSELY-RELATED COMPOUNDS FOR PRODUCING DYES, e.g. PIGMENTS; MORDANTS; LAKES
    • C09B11/00Diaryl- or thriarylmethane dyes
    • C09B11/04Diaryl- or thriarylmethane dyes derived from triarylmethanes, i.e. central C-atom is substituted by amino, cyano, alkyl
    • C09B11/06Hydroxy derivatives of triarylmethanes in which at least one OH group is bound to an aryl nucleus and their ethers or esters
    • C09B11/08Phthaleins; Phenolphthaleins; Fluorescein
    • CCHEMISTRY; METALLURGY
    • C09DYES; PAINTS; POLISHES; NATURAL RESINS; ADHESIVES; COMPOSITIONS NOT OTHERWISE PROVIDED FOR; APPLICATIONS OF MATERIALS NOT OTHERWISE PROVIDED FOR
    • C09BORGANIC DYES OR CLOSELY-RELATED COMPOUNDS FOR PRODUCING DYES, e.g. PIGMENTS; MORDANTS; LAKES
    • C09B11/00Diaryl- or thriarylmethane dyes
    • C09B11/04Diaryl- or thriarylmethane dyes derived from triarylmethanes, i.e. central C-atom is substituted by amino, cyano, alkyl
    • C09B11/10Amino derivatives of triarylmethanes
    • C09B11/24Phthaleins containing amino groups ; Phthalanes; Fluoranes; Phthalides; Rhodamine dyes; Phthaleins having heterocyclic aryl rings; Lactone or lactame forms of triarylmethane dyes
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/531Production of immunochemical test materials
    • G01N33/532Production of labelled immunochemicals
    • G01N33/533Production of labelled immunochemicals with fluorescent label

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  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Molecular Biology (AREA)
  • Biochemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Biotechnology (AREA)
  • Immunology (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Biomedical Technology (AREA)
  • Hematology (AREA)
  • Urology & Nephrology (AREA)
  • Food Science & Technology (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Medicinal Chemistry (AREA)
  • General Physics & Mathematics (AREA)
  • Pathology (AREA)
  • Microbiology (AREA)
  • Cell Biology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Plural Heterocyclic Compounds (AREA)
  • Peptides Or Proteins (AREA)
  • Pyrane Compounds (AREA)
CA002426121A 2000-11-01 2001-10-30 Atropisomers of asymmetric xanthene fluorescent dyes and methods of dna sequencing and fragment analysis Abandoned CA2426121A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US09/704,966 US6448407B1 (en) 2000-11-01 2000-11-01 Atropisomers of asymmetric xanthene fluorescent dyes and methods of DNA sequencing and fragment analysis
US09/704,966 2000-11-01
PCT/US2001/048654 WO2002036832A2 (en) 2000-11-01 2001-10-30 Atropisomers of asymmetric xanthene fluorescent dyes and methods of dna sequencing and fragment analysis

Publications (1)

Publication Number Publication Date
CA2426121A1 true CA2426121A1 (en) 2002-05-10

Family

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Family Applications (1)

Application Number Title Priority Date Filing Date
CA002426121A Abandoned CA2426121A1 (en) 2000-11-01 2001-10-30 Atropisomers of asymmetric xanthene fluorescent dyes and methods of dna sequencing and fragment analysis

Country Status (6)

Country Link
US (5) US6448407B1 (https=)
EP (1) EP1330550A2 (https=)
JP (1) JP2004532805A (https=)
AU (1) AU2002230914A1 (https=)
CA (1) CA2426121A1 (https=)
WO (1) WO2002036832A2 (https=)

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Also Published As

Publication number Publication date
US20040229235A1 (en) 2004-11-18
US6448407B1 (en) 2002-09-10
AU2002230914A1 (en) 2002-05-15
JP2004532805A (ja) 2004-10-28
US20060188915A1 (en) 2006-08-24
US7038063B2 (en) 2006-05-02
EP1330550A2 (en) 2003-07-30
US20070254298A1 (en) 2007-11-01
WO2002036832A2 (en) 2002-05-10
US20030055243A1 (en) 2003-03-20
US6649769B2 (en) 2003-11-18
WO2002036832A3 (en) 2002-08-01

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