CA2420717C - Artificial intelligence system for genetic analysis - Google Patents

Artificial intelligence system for genetic analysis Download PDF

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Publication number
CA2420717C
CA2420717C CA2420717A CA2420717A CA2420717C CA 2420717 C CA2420717 C CA 2420717C CA 2420717 A CA2420717 A CA 2420717A CA 2420717 A CA2420717 A CA 2420717A CA 2420717 C CA2420717 C CA 2420717C
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CA
Canada
Prior art keywords
information
patient
hybridization
data
living organism
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Expired - Fee Related
Application number
CA2420717A
Other languages
English (en)
French (fr)
Other versions
CA2420717A1 (en
CA2420717E (en
Inventor
Glenn F. Osborne
Simon Chin
Paul Mcdonald
Scott Schneider
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Iris Biotechnologies Inc
Original Assignee
Iris Biotechnologies Inc
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Publication date
Application filed by Iris Biotechnologies Inc filed Critical Iris Biotechnologies Inc
Publication of CA2420717A1 publication Critical patent/CA2420717A1/en
Application granted granted Critical
Publication of CA2420717E publication Critical patent/CA2420717E/en
Publication of CA2420717C publication Critical patent/CA2420717C/en
Anticipated expiration legal-status Critical
Expired - Fee Related legal-status Critical Current

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Classifications

    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/10Gene or protein expression profiling; Expression-ratio estimation or normalisation
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00ICT programming tools or database systems specially adapted for bioinformatics

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  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • Medical Informatics (AREA)
  • Biophysics (AREA)
  • Genetics & Genomics (AREA)
  • Theoretical Computer Science (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Evolutionary Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Molecular Biology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Chemical & Material Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Bioethics (AREA)
  • Databases & Information Systems (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Medical Treatment And Welfare Office Work (AREA)
  • Information Retrieval, Db Structures And Fs Structures Therefor (AREA)
CA2420717A 1999-08-27 2000-08-28 Artificial intelligence system for genetic analysis Expired - Fee Related CA2420717C (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US15125899P 1999-08-27 1999-08-27
US60/151,258 1999-08-27
PCT/US2000/023597 WO2001016860A2 (en) 1999-08-27 2000-08-28 Artificial intelligence system for genetic analysis

Publications (3)

Publication Number Publication Date
CA2420717A1 CA2420717A1 (en) 2001-03-08
CA2420717E CA2420717E (en) 2010-07-27
CA2420717C true CA2420717C (en) 2010-07-27

Family

ID=22537965

Family Applications (1)

Application Number Title Priority Date Filing Date
CA2420717A Expired - Fee Related CA2420717C (en) 1999-08-27 2000-08-28 Artificial intelligence system for genetic analysis

Country Status (6)

Country Link
EP (2) EP2899660A1 (https=)
JP (4) JP2003508853A (https=)
AU (1) AU785341B2 (https=)
CA (1) CA2420717C (https=)
NZ (1) NZ518022A (https=)
WO (1) WO2001016860A2 (https=)

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ATE526423T1 (de) 2000-04-18 2011-10-15 Virco Bvba Verfahren zum messen des medikamentenwiderstands gegen hcv
FR2819915B1 (fr) * 2001-01-19 2006-11-17 Interactive Predictive Prevent Procede pour traiter des donnees d'analyse biologique et systeme expert d'analyse biologique mettant en oeuvre ce procede
US7315784B2 (en) 2001-02-15 2008-01-01 Siemens Aktiengesellschaft Network for evaluating data obtained in a biochip measurement device
JP2002318858A (ja) * 2001-04-19 2002-10-31 Toshitada Kameda 医療計画作成支援システム及びコンピュータプログラム
US20020155587A1 (en) 2001-04-20 2002-10-24 Sequenom, Inc. System and method for testing a biological sample
AU2002308662A1 (en) * 2001-05-12 2002-11-25 X-Mine, Inc. Web-based genetic research apparatus
US6958211B2 (en) 2001-08-08 2005-10-25 Tibotech Bvba Methods of assessing HIV integrase inhibitor therapy
JP2003099624A (ja) * 2001-09-25 2003-04-04 Toyo Kohan Co Ltd Dna提供システム
EP1329835A1 (en) * 2002-01-22 2003-07-23 Genonyme GmbH Method and system for anonymously administrating medical test results and user-enabled health risk assessment
JP2004069559A (ja) 2002-08-07 2004-03-04 Seiko Epson Corp 製造システム、その制御装置、制御方法、制御システム及び制御プログラム
US7512496B2 (en) 2002-09-25 2009-03-31 Soheil Shams Apparatus, method, and computer program product for determining confidence measures and combined confidence measures for assessing the quality of microarrays
EP1420248A3 (de) * 2002-11-18 2004-05-26 Schott Glas Validiertes Design für Mikroarrays
US20040122708A1 (en) * 2002-12-18 2004-06-24 Avinash Gopal B. Medical data analysis method and apparatus incorporating in vitro test data
US7490085B2 (en) 2002-12-18 2009-02-10 Ge Medical Systems Global Technology Company, Llc Computer-assisted data processing system and method incorporating automated learning
WO2005028647A1 (ja) * 2003-09-22 2005-03-31 Kyoto University 核酸プローブ、核酸チップ、標的核酸検出方法、薬剤スクリーニング方法、標的核酸検出装置及び遺伝子診断方法
US20060004526A1 (en) * 2004-07-01 2006-01-05 Ambion, Inc. System and method for processing results of a complex genetic test
US7811824B2 (en) 2006-03-30 2010-10-12 Randox Laboratories Limited Method and apparatus for monitoring the properties of a biological or chemical sample
US20080131887A1 (en) 2006-11-30 2008-06-05 Stephan Dietrich A Genetic Analysis Systems and Methods
GB2444410B (en) * 2006-11-30 2011-08-24 Navigenics Inc Genetic analysis systems and methods
EP2186031A4 (en) * 2007-07-23 2014-03-26 Fio Corp A method and system for collating, storing, analyzing and enabling access to collected and analyzed data associated with biological and environmental test subjects
US9953137B2 (en) 2012-07-06 2018-04-24 Nant Holdings Ip, Llc Healthcare analysis stream management
JP6707081B2 (ja) * 2014-10-22 2020-06-10 ベイラー カレッジ オブ メディスンBaylor College Of Medicine 正の選択下で遺伝子を同定する方法
CA2967013C (en) * 2014-11-06 2023-09-05 Ancestryhealth.Com, Llc Predicting health outcomes
WO2018060365A1 (en) * 2016-09-29 2018-04-05 Koninklijke Philips N.V. Genomic variant ranking system for clinical trial matching
JP6499344B2 (ja) * 2018-03-23 2019-04-10 Kddi株式会社 検査結果管理装置、及び検査結果管理方法
CN109583289A (zh) * 2018-09-27 2019-04-05 中国农业大学 蟹的性别识别方法和装置
JP7143743B2 (ja) * 2018-11-30 2022-09-29 株式会社島津製作所 分析システム、分析装置および情報処理方法
JP6777351B2 (ja) * 2020-05-28 2020-10-28 株式会社テンクー プログラム、情報処理装置および情報処理方法
US20230289569A1 (en) * 2020-07-28 2023-09-14 Xcoo, Inc. Non-Transitory Computer Readable Medium, Information Processing Device, Information Processing Method, and Method for Generating Learning Model
CN112630173A (zh) * 2020-12-04 2021-04-09 闪优智谱(厦门)检测科技有限公司 一种化学成分分析系统
US20220208305A1 (en) * 2020-12-24 2022-06-30 Tempus Labs, Inc. Artificial intelligence driven therapy curation and prioritization
US20230298690A1 (en) * 2022-02-14 2023-09-21 AiOnco, Inc. Genetic information processing system with unbounded-sample analysis mechanism and method of operation thereof

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US6040138A (en) 1995-09-15 2000-03-21 Affymetrix, Inc. Expression monitoring by hybridization to high density oligonucleotide arrays
US5861242A (en) 1993-06-25 1999-01-19 Affymetrix, Inc. Array of nucleic acid probes on biological chips for diagnosis of HIV and methods of using the same
US5692107A (en) * 1994-03-15 1997-11-25 Lockheed Missiles & Space Company, Inc. Method for generating predictive models in a computer system
US5882933A (en) * 1995-06-08 1999-03-16 Coulter International Corp. Method for determination of leukocytes and hemoglobin concentration in blood
US5733729A (en) 1995-09-14 1998-03-31 Affymetrix, Inc. Computer-aided probability base calling for arrays of nucleic acid probes on chips
US6063026A (en) 1995-12-07 2000-05-16 Carbon Based Corporation Medical diagnostic analysis system
US5936078A (en) * 1995-12-12 1999-08-10 Kyowa Hakko Kogyo Co., Ltd. DNA and protein for the diagnosis and treatment of Alzheimer's disease
US5966712A (en) 1996-12-12 1999-10-12 Incyte Pharmaceuticals, Inc. Database and system for storing, comparing and displaying genomic information
EP0972830A4 (en) * 1997-02-21 2003-02-05 Takara Shuzo Co GENES ASSOCIATED WITH CANCER
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US6188783B1 (en) * 1997-07-25 2001-02-13 Affymetrix, Inc. Method and system for providing a probe array chip design database
WO1999041373A2 (en) * 1998-02-11 1999-08-19 Incyte Pharmaceuticals, Inc. Human transport-associated molecules
US6004755A (en) 1998-04-07 1999-12-21 Incyte Pharmaceuticals, Inc. Quantitative microarray hybridizaton assays
US6263287B1 (en) 1998-11-12 2001-07-17 Scios Inc. Systems for the analysis of gene expression data

Also Published As

Publication number Publication date
WO2001016860A3 (en) 2001-06-14
EP1222602B1 (en) 2015-12-09
WO2001016860A2 (en) 2001-03-08
JP2003508853A (ja) 2003-03-04
JP2016154042A (ja) 2016-08-25
JP2011238252A (ja) 2011-11-24
JP2014096183A (ja) 2014-05-22
CA2420717A1 (en) 2001-03-08
NZ518022A (en) 2004-01-30
JP5966109B1 (ja) 2016-08-10
AU785341B2 (en) 2007-01-25
EP1222602A2 (en) 2002-07-17
AU6942700A (en) 2001-03-26
EP2899660A1 (en) 2015-07-29

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Effective date: 20190828