BR112022007937A2 - Métodos de sequenciamento e reconstrução de um único polipeptídeo - Google Patents
Métodos de sequenciamento e reconstrução de um único polipeptídeoInfo
- Publication number
- BR112022007937A2 BR112022007937A2 BR112022007937A BR112022007937A BR112022007937A2 BR 112022007937 A2 BR112022007937 A2 BR 112022007937A2 BR 112022007937 A BR112022007937 A BR 112022007937A BR 112022007937 A BR112022007937 A BR 112022007937A BR 112022007937 A2 BR112022007937 A2 BR 112022007937A2
- Authority
- BR
- Brazil
- Prior art keywords
- sequencing
- methods
- polypeptide
- fragments
- reconstruction
- Prior art date
Links
- 229920001184 polypeptide Polymers 0.000 title abstract 8
- 102000004196 processed proteins & peptides Human genes 0.000 title abstract 8
- 108090000765 processed proteins & peptides Proteins 0.000 title abstract 8
- 238000000034 method Methods 0.000 title abstract 4
- 238000012163 sequencing technique Methods 0.000 title abstract 4
- 239000012634 fragment Substances 0.000 abstract 4
- 239000000523 sample Substances 0.000 abstract 4
- 239000003795 chemical substances by application Substances 0.000 abstract 3
- 238000003776 cleavage reaction Methods 0.000 abstract 2
- 230000007017 scission Effects 0.000 abstract 2
- 108091023037 Aptamer Proteins 0.000 abstract 1
- 108090000790 Enzymes Proteins 0.000 abstract 1
- 102000004190 Enzymes Human genes 0.000 abstract 1
- 102000018389 Exopeptidases Human genes 0.000 abstract 1
- 108010091443 Exopeptidases Proteins 0.000 abstract 1
- 125000003275 alpha amino acid group Chemical group 0.000 abstract 1
Classifications
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/58—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving labelled substances
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/34—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving hydrolase
- C12Q1/37—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving hydrolase involving peptidase or proteinase
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/543—Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals
- G01N33/54366—Apparatus specially adapted for solid-phase testing
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
- G01N33/6818—Sequencing of polypeptides
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
- G01N33/6842—Proteomic analysis of subsets of protein mixtures with reduced complexity, e.g. membrane proteins, phosphoproteins, organelle proteins
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
- C12Q2525/10—Modifications characterised by
- C12Q2525/205—Aptamer
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
- C12Q2563/179—Nucleic acid detection characterized by the use of physical, structural and functional properties the label being a nucleic acid
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2570/00—Omics, e.g. proteomics, glycomics or lipidomics; Methods of analysis focusing on the entire complement of classes of biological molecules or subsets thereof, i.e. focusing on proteomes, glycomes or lipidomes
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Molecular Biology (AREA)
- Chemical & Material Sciences (AREA)
- Immunology (AREA)
- Physics & Mathematics (AREA)
- Hematology (AREA)
- Biomedical Technology (AREA)
- Urology & Nephrology (AREA)
- Biophysics (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Biotechnology (AREA)
- Biochemistry (AREA)
- Analytical Chemistry (AREA)
- General Health & Medical Sciences (AREA)
- Microbiology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Bioinformatics & Computational Biology (AREA)
- Medicinal Chemistry (AREA)
- Food Science & Technology (AREA)
- Cell Biology (AREA)
- General Physics & Mathematics (AREA)
- Pathology (AREA)
- Organic Chemistry (AREA)
- Wood Science & Technology (AREA)
- Zoology (AREA)
- General Engineering & Computer Science (AREA)
- Genetics & Genomics (AREA)
- Peptides Or Proteins (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Investigating Or Analysing Biological Materials (AREA)
- Apparatus Associated With Microorganisms And Enzymes (AREA)
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201962927005P | 2019-10-28 | 2019-10-28 | |
| US201962940968P | 2019-11-27 | 2019-11-27 | |
| PCT/US2020/057669 WO2021086918A1 (en) | 2019-10-28 | 2020-10-28 | Methods of single-polypeptide sequencing and reconstruction |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| BR112022007937A2 true BR112022007937A2 (pt) | 2022-08-30 |
Family
ID=73476267
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| BR112022007937A BR112022007937A2 (pt) | 2019-10-28 | 2020-10-28 | Métodos de sequenciamento e reconstrução de um único polipeptídeo |
Country Status (10)
| Country | Link |
|---|---|
| US (1) | US20210148922A1 (https=) |
| EP (1) | EP4051806A1 (https=) |
| JP (1) | JP2023501932A (https=) |
| KR (1) | KR20220108056A (https=) |
| CN (1) | CN114929887A (https=) |
| AU (1) | AU2020376814A1 (https=) |
| BR (1) | BR112022007937A2 (https=) |
| CA (1) | CA3159362A1 (https=) |
| MX (1) | MX2022005094A (https=) |
| WO (1) | WO2021086918A1 (https=) |
Families Citing this family (9)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| GB201715684D0 (en) | 2017-09-28 | 2017-11-15 | Univ Gent | Means and methods for single molecule peptide sequencing |
| KR20250152680A (ko) | 2017-12-29 | 2025-10-23 | 노틸러스 서브시디어리, 인크. | 단백질 식별을 위한 디코딩 접근법 |
| AU2019380606B2 (en) | 2018-11-15 | 2026-04-23 | Quantum-Si Incorporated | Methods and compositions for protein sequencing |
| US12011716B2 (en) | 2019-10-29 | 2024-06-18 | Quantum-Si Incorporated | Peristaltic pumping of fluids and associated methods, systems, and devices |
| EP4143579A2 (en) | 2020-05-20 | 2023-03-08 | Quantum-si Incorporated | Methods and compositions for protein sequencing |
| CA3227872A1 (en) * | 2021-09-09 | 2023-03-16 | James Henry JOLY | Characterization and localization of protein modifications |
| AU2022422112A1 (en) | 2021-12-22 | 2024-08-01 | Trustees Of Boston University | Bodipy-based dyes for digital spatial proteomics |
| JP2025538856A (ja) * | 2022-10-21 | 2025-12-02 | クアンタム－エスアイ インコーポレイテッド | ポリペプチド切断試薬及びその使用 |
| WO2025169569A1 (ja) * | 2024-02-08 | 2025-08-14 | コニカミノルタ株式会社 | 核酸アプタマーの配列の決定方法 |
Family Cites Families (10)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CA2496294A1 (en) | 2005-02-07 | 2006-08-07 | The University Of British Columbia | Apparatus and methods for concentrating and separating particles such as molecules |
| ATE460666T1 (de) * | 2008-01-15 | 2010-03-15 | Univ Utrecht Holding Bv | Verfahren zur bestimmung der aminosäurensequenz von peptiden |
| CA2745197A1 (en) * | 2008-12-01 | 2010-06-10 | Research Triangle Institute | Concurrent identification of multitudes of polypeptides |
| WO2010065531A1 (en) * | 2008-12-01 | 2010-06-10 | Robi David Mitra | Single molecule protein screening |
| US9435810B2 (en) * | 2013-03-15 | 2016-09-06 | Washington University | Molecules and methods for iterative polypeptide analysis and processing |
| CA3208970A1 (en) * | 2014-09-15 | 2016-05-06 | Board Of Regents, The University Of Texas System | Improved single molecule peptide sequencing |
| CA3081446A1 (en) * | 2017-10-31 | 2019-05-09 | Encodia, Inc. | Methods and compositions for polypeptide analysis |
| JP7390027B2 (ja) * | 2017-10-31 | 2023-12-01 | エンコディア， インコーポレイテッド | 核酸エンコーディングおよび／または標識を使用する解析のためのキット |
| CA3110800A1 (en) * | 2018-07-12 | 2020-01-16 | Board Of Regents, The University Of Texas System | Molecular neighborhood detection by oligonucleotides |
| KR20210045449A (ko) * | 2018-08-17 | 2021-04-26 | 리제너론 파아마슈티컬스, 인크. | 새로운 단백질 서열분석 방법 |
-
2020
- 2020-10-28 US US17/082,940 patent/US20210148922A1/en not_active Abandoned
- 2020-10-28 WO PCT/US2020/057669 patent/WO2021086918A1/en not_active Ceased
- 2020-10-28 BR BR112022007937A patent/BR112022007937A2/pt not_active Application Discontinuation
- 2020-10-28 EP EP20808594.4A patent/EP4051806A1/en not_active Withdrawn
- 2020-10-28 CN CN202080090914.5A patent/CN114929887A/zh active Pending
- 2020-10-28 MX MX2022005094A patent/MX2022005094A/es unknown
- 2020-10-28 AU AU2020376814A patent/AU2020376814A1/en not_active Abandoned
- 2020-10-28 KR KR1020227017592A patent/KR20220108056A/ko not_active Ceased
- 2020-10-28 JP JP2022525108A patent/JP2023501932A/ja active Pending
- 2020-10-28 CA CA3159362A patent/CA3159362A1/en active Pending
Also Published As
| Publication number | Publication date |
|---|---|
| AU2020376814A1 (en) | 2022-06-02 |
| US20210148922A1 (en) | 2021-05-20 |
| MX2022005094A (es) | 2022-08-15 |
| KR20220108056A (ko) | 2022-08-02 |
| JP2023501932A (ja) | 2023-01-20 |
| WO2021086918A1 (en) | 2021-05-06 |
| CA3159362A1 (en) | 2021-05-06 |
| CN114929887A (zh) | 2022-08-19 |
| EP4051806A1 (en) | 2022-09-07 |
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Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| B11A | Dismissal acc. art.33 of ipl - examination not requested within 36 months of filing | ||
| B11Y | Definitive dismissal - extension of time limit for request of examination expired [chapter 11.1.1 patent gazette] |