AU2012236109A1 - Methods and kits for detecting cell-free pathogen-specific nucleic acids - Google Patents

Methods and kits for detecting cell-free pathogen-specific nucleic acids Download PDF

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Publication number
AU2012236109A1
AU2012236109A1 AU2012236109A AU2012236109A AU2012236109A1 AU 2012236109 A1 AU2012236109 A1 AU 2012236109A1 AU 2012236109 A AU2012236109 A AU 2012236109A AU 2012236109 A AU2012236109 A AU 2012236109A AU 2012236109 A1 AU2012236109 A1 AU 2012236109A1
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AU
Australia
Prior art keywords
nucleic acid
target nucleic
double stranded
stranded dna
subject
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Abandoned
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AU2012236109A
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English (en)
Inventor
Mingwei Qian
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Occam Biolabs Inc
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Occam Biolabs Inc
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Publication date
Application filed by Occam Biolabs Inc filed Critical Occam Biolabs Inc
Publication of AU2012236109A1 publication Critical patent/AU2012236109A1/en
Priority to AU2017203071A priority Critical patent/AU2017203071A1/en
Priority to AU2019204844A priority patent/AU2019204844A1/en
Abandoned legal-status Critical Current

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/689Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
AU2012236109A 2011-04-01 2012-04-02 Methods and kits for detecting cell-free pathogen-specific nucleic acids Abandoned AU2012236109A1 (en)

Priority Applications (2)

Application Number Priority Date Filing Date Title
AU2017203071A AU2017203071A1 (en) 2011-04-01 2017-05-09 Methods and kits for detecting cell-free pathogen-specific nucleic acids
AU2019204844A AU2019204844A1 (en) 2011-04-01 2019-07-05 Methods and kits for detecting cell-free pathogen-specific nucleic acids

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201161470774P 2011-04-01 2011-04-01
US61/470,774 2011-04-01
PCT/US2012/031814 WO2012135815A2 (en) 2011-04-01 2012-04-02 Methods and kits for detecting cell-free pathogen-specific nucleic acids

Related Child Applications (1)

Application Number Title Priority Date Filing Date
AU2017203071A Division AU2017203071A1 (en) 2011-04-01 2017-05-09 Methods and kits for detecting cell-free pathogen-specific nucleic acids

Publications (1)

Publication Number Publication Date
AU2012236109A1 true AU2012236109A1 (en) 2013-11-21

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Family Applications (3)

Application Number Title Priority Date Filing Date
AU2012236109A Abandoned AU2012236109A1 (en) 2011-04-01 2012-04-02 Methods and kits for detecting cell-free pathogen-specific nucleic acids
AU2017203071A Abandoned AU2017203071A1 (en) 2011-04-01 2017-05-09 Methods and kits for detecting cell-free pathogen-specific nucleic acids
AU2019204844A Abandoned AU2019204844A1 (en) 2011-04-01 2019-07-05 Methods and kits for detecting cell-free pathogen-specific nucleic acids

Family Applications After (2)

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AU2017203071A Abandoned AU2017203071A1 (en) 2011-04-01 2017-05-09 Methods and kits for detecting cell-free pathogen-specific nucleic acids
AU2019204844A Abandoned AU2019204844A1 (en) 2011-04-01 2019-07-05 Methods and kits for detecting cell-free pathogen-specific nucleic acids

Country Status (7)

Country Link
US (2) US20140147851A1 (enExample)
EP (1) EP2694680A4 (enExample)
JP (2) JP6430826B2 (enExample)
CN (2) CN103814139B (enExample)
AU (3) AU2012236109A1 (enExample)
RU (1) RU2644672C2 (enExample)
WO (1) WO2012135815A2 (enExample)

Families Citing this family (26)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
RU2644672C2 (ru) * 2011-04-01 2018-02-13 Оккам Байолэбс, Инк. Способы и наборы для обнаружения бесклеточных специфических для патогенов нуклеиновых кислот
KR20170106657A (ko) * 2011-09-30 2017-09-21 인텔 코포레이션 집적회로 구조 및 집적회로 구조의 제조 방법
RU2654666C2 (ru) 2013-05-24 2018-05-21 Оккам Байолэбс, Инк. Система и способ сбора образца нуклеиновой кислоты
US9644232B2 (en) 2013-07-26 2017-05-09 General Electric Company Method and device for collection and amplification of circulating nucleic acids
CN105829589B (zh) 2013-11-07 2021-02-02 小利兰·斯坦福大学理事会 用于分析人体微生物组及其组分的无细胞核酸
CN104894226A (zh) * 2014-03-07 2015-09-09 复旦大学 检测实验室结核分枝杆菌微环境表面污染的方法及其检测试剂盒
RU2729113C2 (ru) 2014-11-21 2020-08-04 Оккам Байолэбс, Инк. Система и способ сбора образца нуклеиновой кислоты
AU2016264102A1 (en) 2015-05-18 2017-12-21 Karius, Inc. Compositions and methods for enriching populations of nucleic acids
ES2818569T3 (es) 2015-09-09 2021-04-13 Drawbridge Health Inc Métodos para la recopilación, estabilización y conservación de muestras
EP3141612A1 (en) 2015-09-10 2017-03-15 Fraunhofer-Gesellschaft zur Förderung der angewandten Forschung e.V. Method and device for nucleic acid based diagnostic approaches including the determination of a deviant condtion, especially a health condition and/or pathogenic condition of a sample
WO2017077999A1 (ja) * 2015-11-06 2017-05-11 公立大学法人横浜市立大学 結核菌群由来dnaの検出方法
CN105296661A (zh) * 2015-12-02 2016-02-03 北京市结核病胸部肿瘤研究所 通过检测游离核酸诊断结核病的试剂盒及其应用
EP3433382B1 (en) 2016-03-25 2021-09-01 Karius, Inc. Synthetic nucleic acid spike-ins
WO2018008083A1 (ja) * 2016-07-05 2018-01-11 株式会社日立製作所 Dna検出方法およびそのための装置
CN110312800B (zh) 2016-11-11 2025-01-10 生物辐射实验室股份有限公司 处理核酸样本的方法
KR102502654B1 (ko) * 2017-01-30 2023-02-23 세이프가드 바이오시스템스 홀딩스 엘티디. 미생물로부터 데옥시리보핵산 및/또는 리보핵산을 추출하기 위한 비드 비팅 튜브 및 방법
WO2018191563A1 (en) 2017-04-12 2018-10-18 Karius, Inc. Sample preparation methods, systems and compositions
CN108165563B (zh) * 2017-12-01 2021-02-19 北京蛋白质组研究中心 结核分枝杆菌H37Rv编码基因及其应用
CN108165560B (zh) * 2017-12-01 2021-06-08 北京蛋白质组研究中心 结核分枝杆菌H37Rv编码基因及其应用
CN108165562B (zh) * 2017-12-01 2021-06-08 北京蛋白质组研究中心 结核分枝杆菌H37Rv编码基因及其应用
CN108165561B (zh) * 2017-12-01 2021-06-18 北京蛋白质组研究中心 结核分枝杆菌H37Rv编码基因及其应用
CA3082601A1 (en) 2018-03-16 2019-09-19 Karius, Inc. Sample series to differentiate target nucleic acids from contaminant nucleic acids
DK4428234T3 (da) 2018-11-21 2026-01-26 Karius Inc Direkte-til-bibliotek-fremgangsmåder, systemer og sammensætninger
CN111876411A (zh) * 2019-09-06 2020-11-03 深圳微伴生物有限公司 获得cfDNA标准品的引物组、PCR扩增阳性标准品及其制备方法、试剂盒及应用
KR102286570B1 (ko) * 2019-11-19 2021-08-05 대한민국 소변 시료를 이용하여 결핵 진단용 프라이머, 프로브, 키트 및 이들의 용도
CN114480691A (zh) * 2022-01-24 2022-05-13 广州迪澳基因科技有限公司 基于熔解曲线检测结核分枝杆菌复合菌群的方法及试剂盒

Family Cites Families (16)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
PT528306E (pt) * 1991-08-15 2000-05-31 Hoffmann La Roche Iniciadores e sondas de micobacterias
US6458366B1 (en) * 1995-09-01 2002-10-01 Corixa Corporation Compounds and methods for diagnosis of tuberculosis
DK0975807T3 (da) * 1997-05-02 2007-01-29 Gen Probe Inc To-trins hybridisering og indfangning af et polynukleotid
DE19752898A1 (de) * 1997-11-28 1999-08-05 Centeon Pharma Gmbh Verfahren zum Nachweis hoher Vierenkonzentrationen im Blutplasma und/oder Blutserum mittels der Polymerasekettenreaktion
US6951722B2 (en) * 1999-03-19 2005-10-04 Takara Bio Inc. Method for amplifying nucleic acid sequence
TWI237695B (en) * 1999-12-14 2005-08-11 Joy Biomedical Corp Helicobacter pylori antigens in blood
AU2002224556A1 (en) * 2000-07-24 2002-02-05 Inpharmatica Limited Adhesion molecules
CN1388378A (zh) * 2002-06-17 2003-01-01 四川大学 结核分枝杆菌诊断检测试剂
JP4571650B2 (ja) * 2004-02-03 2010-10-27 ポステック・ファウンデーション 連続流式高性能反応装置
EP1885877A2 (en) * 2005-02-17 2008-02-13 Istituto Nazionale per le Malattie Infettive "Lazzaro Spallanzani" IRCCS Compositions and methods for detecting pathogen specific nucleic acids in urine
JP2009515545A (ja) * 2005-11-15 2009-04-16 ジェノイド・ケーエフティー 方法
US8741565B2 (en) * 2005-12-30 2014-06-03 Honeywell International Inc. Oligonucleotide microarray for identification of pathogens
US20090142757A1 (en) * 2007-11-30 2009-06-04 Asiagen Corporation Strip and method for detecting nucleotide amplification products of mycobacterium tuberculosis and non-tuberculous mycobacterium
US8029806B2 (en) * 2008-04-16 2011-10-04 Asiagen Corporation Method for diagnosing of Mycobacterium tuberculosis
US8906621B2 (en) * 2009-01-06 2014-12-09 Qimin You Cross priming amplification of target nucleic acids
RU2644672C2 (ru) * 2011-04-01 2018-02-13 Оккам Байолэбс, Инк. Способы и наборы для обнаружения бесклеточных специфических для патогенов нуклеиновых кислот

Also Published As

Publication number Publication date
RU2013148806A (ru) 2015-05-10
JP2018117645A (ja) 2018-08-02
CN103814139A (zh) 2014-05-21
US20170369932A1 (en) 2017-12-28
CN103814139B (zh) 2018-11-13
JP2014510538A (ja) 2014-05-01
WO2012135815A3 (en) 2012-12-27
AU2019204844A1 (en) 2019-07-25
EP2694680A2 (en) 2014-02-12
US20140147851A1 (en) 2014-05-29
JP6430826B2 (ja) 2018-11-28
EP2694680A4 (en) 2014-09-10
AU2017203071A1 (en) 2017-06-01
WO2012135815A2 (en) 2012-10-04
CN109280713A (zh) 2019-01-29
RU2644672C2 (ru) 2018-02-13

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