AU2006292174B2 - Reagents, methods and kits for classification of fungi and direction of anti-fungal therapy - Google Patents

Reagents, methods and kits for classification of fungi and direction of anti-fungal therapy Download PDF

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Publication number
AU2006292174B2
AU2006292174B2 AU2006292174A AU2006292174A AU2006292174B2 AU 2006292174 B2 AU2006292174 B2 AU 2006292174B2 AU 2006292174 A AU2006292174 A AU 2006292174A AU 2006292174 A AU2006292174 A AU 2006292174A AU 2006292174 B2 AU2006292174 B2 AU 2006292174B2
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AU
Australia
Prior art keywords
probe
fluconazole
reagent
nucleic acid
fungi
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
AU2006292174A
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English (en)
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AU2006292174A1 (en
Inventor
Mark Fiandaca
Henrik Stender
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AdvanDx Inc
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AdvanDx Inc
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Publication date
Application filed by AdvanDx Inc filed Critical AdvanDx Inc
Publication of AU2006292174A1 publication Critical patent/AU2006292174A1/en
Application granted granted Critical
Publication of AU2006292174B2 publication Critical patent/AU2006292174B2/en
Ceased legal-status Critical Current
Anticipated expiration legal-status Critical

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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/6895—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for plants, fungi or algae
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/158—Expression markers

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Analytical Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Biotechnology (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Biophysics (AREA)
  • Molecular Biology (AREA)
  • Physics & Mathematics (AREA)
  • Mycology (AREA)
  • Botany (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
AU2006292174A 2005-09-20 2006-09-20 Reagents, methods and kits for classification of fungi and direction of anti-fungal therapy Ceased AU2006292174B2 (en)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US71915305P 2005-09-20 2005-09-20
US60/719,153 2005-09-20
US78965606P 2006-04-05 2006-04-05
US60/789,656 2006-04-05
PCT/US2006/036645 WO2007035814A2 (en) 2005-09-20 2006-09-20 Reagents, methods and kits for classification of fungi and direction of anti-fungal therapy

Publications (2)

Publication Number Publication Date
AU2006292174A1 AU2006292174A1 (en) 2007-03-29
AU2006292174B2 true AU2006292174B2 (en) 2012-02-23

Family

ID=37889500

Family Applications (1)

Application Number Title Priority Date Filing Date
AU2006292174A Ceased AU2006292174B2 (en) 2005-09-20 2006-09-20 Reagents, methods and kits for classification of fungi and direction of anti-fungal therapy

Country Status (6)

Country Link
US (3) US20070082351A1 (enExample)
EP (1) EP1945810B1 (enExample)
JP (1) JP5356819B2 (enExample)
AU (1) AU2006292174B2 (enExample)
CA (1) CA2623181A1 (enExample)
WO (1) WO2007035814A2 (enExample)

Families Citing this family (20)

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US8888969B2 (en) 2008-09-02 2014-11-18 The Governing Council Of The University Of Toronto Nanostructured microelectrodes and biosensing devices incorporating the same
JP5989668B2 (ja) 2011-01-11 2016-09-07 ザ ガバニング カウンシル オブ ザ ユニバーシティ オブ トロント タンパク質検出方法
EP3369828B1 (en) 2011-02-07 2020-07-15 The Governing Council Of The University Of Toronto Bioprobes and methods of use thereof
JP5990987B2 (ja) * 2012-04-11 2016-09-14 株式会社Ihi 微生物固定方法、および微生物検出方法
EP3071965A1 (en) 2013-11-21 2016-09-28 Avails Medical, Inc. Electrical biosensor for detecting a substance in a bodily fluid, and method and system for same
US9963733B2 (en) 2014-06-05 2018-05-08 Avails Medical, Inc. Devices, systems and methods for detecting viable infectious agents in a fluid sample
CA2996417A1 (en) 2015-08-25 2017-03-02 Avails Medical, Inc. Devices, systems and methods for detecting viable microorganisms in a fluid sample
FR3044415B1 (fr) * 2015-11-27 2017-12-01 Biomerieux Sa Procede de determination de la reaction d'un microorganisme a son exposition a un antibiotique
US10254245B2 (en) 2016-01-25 2019-04-09 Avails Medical, Inc. Devices, systems and methods for detecting viable infectious agents in a fluid sample using an electrolyte-insulator-semiconductor sensor
WO2017209839A1 (en) 2016-05-31 2017-12-07 Avails Medical, Inc. Detecting viable infectious agents in a fluid sample and susceptibility of infectious agents to anti-infectives
WO2018111234A1 (en) 2016-12-13 2018-06-21 Avails Medical, Inc. DEVICES, SYSTEMS AND METHODS TO DETECT THE PRESENCE OF ß-LACTAM ANTIBIOTIC HYDROLYZING BACTERIA IN A SAMPLE
WO2019005296A1 (en) 2017-06-27 2019-01-03 Avails Medical, Inc. APPARATUS, SYSTEMS AND METHODS FOR DETERMINING THE SENSITIVITY OF MICROORGANISMS TO ANTI-INFECTIOUS
CN111182971B (zh) 2017-10-03 2022-08-30 阿威尔斯医疗公司 用于基于氧化还原反应测定微生物的浓度和微生物对抗感染剂的敏感性的装置、系统和方法
JP7254077B2 (ja) 2017-12-05 2023-04-07 アベイルズ メディカル，インコーポレイテッド 下流試験用の規定濃度の感染因子を含む出力サンプルの調製
JP2021534804A (ja) 2018-09-03 2021-12-16 ビスビュー メディカル，インコーポレイテッド 抗生物質感受性検査のための装置および方法
AU2019353145B2 (en) * 2018-10-04 2025-12-04 First Light Diagnostics, Inc. Microbial analysis without cell purification
WO2020117650A1 (en) 2018-12-03 2020-06-11 Avails Medical, Inc. Apparatus, systems, and methods for quantifying infectious agents
WO2021138544A1 (en) 2020-01-03 2021-07-08 Visby Medical, Inc. Devices and methods for antibiotic susceptibility testing
CN112458145B (zh) * 2021-01-06 2021-06-04 健康元海滨药业有限公司 一种注射用醋酸卡泊芬净制剂的无菌检测方法
CN117551801A (zh) * 2023-09-25 2024-02-13 中国医学科学院北京协和医院 分子标记及其应用和基于erg11基因拷贝数检测近平滑念珠菌氟康唑耐药性的方法和系统

Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5541308A (en) * 1986-11-24 1996-07-30 Gen-Probe Incorporated Nucleic acid probes for detection and/or quantitation of non-viral organisms
US20030175727A1 (en) * 2001-05-18 2003-09-18 Hyldig-Nielsen Jens J. PNA probes, probe sets, methods and kits pertaining to the detection of candida
US20040002592A1 (en) * 2000-10-30 2004-01-01 Hermann Einsele Detection of rare Candida species

Family Cites Families (13)

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CA2025180A1 (en) 1989-10-12 1991-04-13 William G. Weisburg Nucleic acid probes and methods for detecting pathogenic candida yeasts
US5539082A (en) * 1993-04-26 1996-07-23 Nielsen; Peter E. Peptide nucleic acids
US5763169A (en) * 1995-01-13 1998-06-09 Chiron Diagnostics Corporation Nucleic acid probes for the detection and identification of fungi
CA2265474C (en) * 1996-09-16 2010-04-13 The Government Of The United States Of America, Represented By The Secretary, Department Of Health And Human Services Methods and compositions for the detection of candida spp.
US20020098483A1 (en) * 1996-10-22 2002-07-25 Jurgen Loffler Method for detecting resistant fungal cells in clinical material
DE19654946A1 (de) * 1996-10-22 1998-05-07 Univ Eberhard Karls Verfahren zum Nachweis von resistenten Pilzzellen in klinischem Material
US6242178B1 (en) * 1997-07-30 2001-06-05 Centers For Disease Control And Prevention Nucleic acid probes for detecting Candida species
CA2374878C (en) * 1999-05-28 2014-10-14 Innogenetics N.V. Nucleic acid probes and methods for detecting clinically important fungal pathogens
JP2003522535A (ja) * 2000-02-08 2003-07-29 アバンテイス・フアルマ・エス・アー アデノウイルスの検出及び定量方法
AU5926401A (en) * 2000-05-01 2001-11-12 Gen Probe Inc Polynucleotide probes for detection and quantitation of candida species
JP2002142775A (ja) * 2000-11-14 2002-05-21 Ss Pharmaceut Co Ltd カンジダ属真菌検出用核酸及びそれを用いたカンジダ属真菌の検出方法
US20050054516A1 (en) 2003-09-05 2005-03-10 Vaughn Stephen Neil Processes for formulating catalyst compositions having desirable particle size characteristics
EP1709198B1 (en) * 2003-11-26 2013-08-14 AdvanDx, Inc. Peptide nucleic acid probes for analysis of certain staphylococcus species

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5541308A (en) * 1986-11-24 1996-07-30 Gen-Probe Incorporated Nucleic acid probes for detection and/or quantitation of non-viral organisms
US20040002592A1 (en) * 2000-10-30 2004-01-01 Hermann Einsele Detection of rare Candida species
US20030175727A1 (en) * 2001-05-18 2003-09-18 Hyldig-Nielsen Jens J. PNA probes, probe sets, methods and kits pertaining to the detection of candida

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
RIGBY, S. et al., 'Journal of Clinical Microbiology, 2002, vol. 40, no. 6, pages 2182-218 *
SHIN, J. H. et al., Journal of Clinical Microbiology, 1999, vol. 37, no. 1, pages 165-170 *

Also Published As

Publication number Publication date
CA2623181A1 (en) 2007-03-29
JP5356819B2 (ja) 2013-12-04
US20070082351A1 (en) 2007-04-12
EP1945810B1 (en) 2015-07-01
EP1945810A4 (en) 2009-07-22
JP2009508531A (ja) 2009-03-05
US20140342356A1 (en) 2014-11-20
US20090092994A1 (en) 2009-04-09
WO2007035814A8 (en) 2015-10-08
EP1945810A2 (en) 2008-07-23
AU2006292174A1 (en) 2007-03-29
WO2007035814A3 (en) 2008-12-24
US8795972B2 (en) 2014-08-05
WO2007035814A2 (en) 2007-03-29

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FGA Letters patent sealed or granted (standard patent)
MK14 Patent ceased section 143(a) (annual fees not paid) or expired