AU2005245948B2 - Use of whole blood in PCR reactions - Google Patents

Use of whole blood in PCR reactions Download PDF

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Publication number
AU2005245948B2
AU2005245948B2 AU2005245948A AU2005245948A AU2005245948B2 AU 2005245948 B2 AU2005245948 B2 AU 2005245948B2 AU 2005245948 A AU2005245948 A AU 2005245948A AU 2005245948 A AU2005245948 A AU 2005245948A AU 2005245948 B2 AU2005245948 B2 AU 2005245948B2
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AU
Australia
Prior art keywords
seq
amino acid
blood
dna
polymerase
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Expired - Fee Related
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AU2005245948A
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English (en)
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AU2005245948A1 (en
Inventor
Wayne M. Barnes
Milko B. Kermekchiev
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Priority claimed from US10/850,816 external-priority patent/US20050260606A1/en
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Publication of AU2005245948A1 publication Critical patent/AU2005245948A1/en
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Publication of AU2005245948B2 publication Critical patent/AU2005245948B2/en
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/686Polymerase chain reaction [PCR]
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/10Transferases (2.)
    • C12N9/12Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
    • C12N9/1241Nucleotidyltransferases (2.7.7)
    • C12N9/1252DNA-directed DNA polymerase (2.7.7.7), i.e. DNA replicase

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Genetics & Genomics (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • Biotechnology (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Medicinal Chemistry (AREA)
  • Biomedical Technology (AREA)
  • Physics & Mathematics (AREA)
  • Analytical Chemistry (AREA)
  • Biophysics (AREA)
  • Immunology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Enzymes And Modification Thereof (AREA)
AU2005245948A 2004-05-20 2005-05-20 Use of whole blood in PCR reactions Expired - Fee Related AU2005245948B2 (en)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US10/850,816 US20050260606A1 (en) 2004-05-20 2004-05-20 Use of whole blood in PCR reactions
US10/850,816 2004-05-20
US11/005,559 US7462475B2 (en) 2004-05-20 2004-12-06 Use of whole blood in PCR reactions
US11/005,559 2004-12-06
PCT/US2005/017669 WO2005113829A2 (en) 2004-05-20 2005-05-20 Use of whole blood in pcr reactions

Publications (2)

Publication Number Publication Date
AU2005245948A1 AU2005245948A1 (en) 2005-12-01
AU2005245948B2 true AU2005245948B2 (en) 2011-04-07

Family

ID=35428948

Family Applications (1)

Application Number Title Priority Date Filing Date
AU2005245948A Expired - Fee Related AU2005245948B2 (en) 2004-05-20 2005-05-20 Use of whole blood in PCR reactions

Country Status (7)

Country Link
US (3) US7462475B2 (enExample)
EP (1) EP1747290B1 (enExample)
JP (1) JP2008506417A (enExample)
AU (1) AU2005245948B2 (enExample)
CA (1) CA2567620C (enExample)
DK (1) DK1747290T3 (enExample)
WO (1) WO2005113829A2 (enExample)

Families Citing this family (39)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7462475B2 (en) 2004-05-20 2008-12-09 Dna Poleymerase Technology, Inc. Use of whole blood in PCR reactions
EP1880206B1 (en) * 2005-05-09 2012-11-14 Affymetrix, Inc. Multiplex capture of nucleic acids
US8632970B2 (en) 2005-05-09 2014-01-21 Affymetrix, Inc. Multiplex capture of nucleic acids
CA2607221A1 (en) 2005-05-12 2006-11-23 Panomics, Inc. Multiplex branched-chain dna assays
CN101495650B (zh) * 2005-06-20 2015-02-04 领先细胞医疗诊断有限公司 检测单个细胞中的核酸和鉴定异质大细胞群中罕见细胞的方法
US7927798B2 (en) * 2005-10-05 2011-04-19 Panomics, Inc. Detection of nucleic acids from whole blood
EP2061894A4 (en) * 2006-09-14 2010-05-05 Dna Polymerase Technology Inc USE OF MUTANT TAQ POLYMERASE ENZYMES FOR DNA AMPLIFICATION IN THE PRESENCE OF PCR INHIBITORS
JP5292722B2 (ja) * 2007-05-09 2013-09-18 凸版印刷株式会社 未精製血液をサンプルとする核酸増幅法
WO2009140497A1 (en) * 2008-05-16 2009-11-19 New England Biolabs, Inc. Enzyme reagents for amplification of polynucleotides in the presence of inhibitors
FI20095729A0 (fi) * 2009-06-26 2009-06-26 Finnzymes Oy Menetelmä deoksiribonukleiinihappojen kvantitatiiviseen PCR-monistukseen PCR-inhibiittoreita sisältävästä näytteestä
ES2648564T3 (es) 2010-10-21 2018-01-04 Advanced Cell Diagnostics, Inc. Método ultrasensible para la detección in situ de ácidos nucleicos
US8409807B2 (en) 2010-10-22 2013-04-02 T2 Biosystems, Inc. NMR systems and methods for the rapid detection of analytes
US8563298B2 (en) 2010-10-22 2013-10-22 T2 Biosystems, Inc. NMR systems and methods for the rapid detection of analytes
US9714940B2 (en) 2010-10-22 2017-07-25 T2 Biosystems, Inc. NMR systems and methods for the rapid detection of analytes
US9017979B2 (en) 2011-04-11 2015-04-28 Roche Molecular Systems, Inc. DNA polymerases with improved activity
GB201113430D0 (en) 2011-08-03 2011-09-21 Fermentas Uab DNA polymerases
US11208636B2 (en) 2011-08-10 2021-12-28 Life Technologies Corporation Polymerase compositions, methods of making and using same
EP2742151B1 (en) 2011-08-10 2017-10-25 Life Technologies Corporation Polymerase compositions
CA2858264C (en) 2011-12-08 2018-01-02 F. Hoffmann-La Roche Ag Dna polymerases with improved activity
US9562271B2 (en) 2012-04-20 2017-02-07 T2 Biosystems, Inc. Compositions and methods for detection of Candida species
US10683537B2 (en) * 2012-10-16 2020-06-16 Dna Polymerase Technology, Inc. Inhibition-resistant polymerases
GB201219137D0 (en) * 2012-10-24 2012-12-05 Ge Healthcare Uk Ltd Direct nucleic acid amplification kit, reagent and method
WO2016118766A2 (en) 2015-01-21 2016-07-28 T2 Biosystems, Inc. Nmr methods and systems for the rapid detection of tick-borne pathogens
WO2016183294A1 (en) 2015-05-12 2016-11-17 Dna Polymerase Technology, Inc. Mutant polymerases and uses thereof
DK3362462T3 (da) 2015-10-12 2021-10-11 Advanced Cell Diagnostics Inc In situ-detektion af nukleotidvarianter i prøver med højt støjniveau, og sammensætninger og fremgangsmåder relateret dertil
WO2017090684A1 (ja) * 2015-11-27 2017-06-01 国立大学法人九州大学 Dnaポリメラーゼ変異体
EP3405559B1 (en) 2016-01-21 2021-11-17 T2 Biosystems, Inc. Rapid antimicrobial susceptibility testing using high-sensitivity direct detection methods
CA3011901A1 (en) 2016-01-21 2017-07-27 T2 Biosystems, Inc. Nmr methods and systems for the rapid detection of bacteria
WO2017180745A1 (en) 2016-04-14 2017-10-19 T2 Biosystems, Inc. Methods and systems for amplification in complex samples
US10626444B2 (en) * 2016-10-14 2020-04-21 ACUDX Inc. Methods of assaying nucleic acids of low quantities using a buffer nucleic acid
JP6730525B2 (ja) 2016-11-21 2020-07-29 ナノストリング テクノロジーズ,インコーポレイティド 化学組成物とそれを利用する方法
WO2019143622A1 (en) 2018-01-19 2019-07-25 Bio-Rad Laboratories, Inc. Mutant dna polymerases
JP7525402B2 (ja) 2018-05-14 2024-07-30 ナノストリング テクノロジーズ,インコーポレイティド 化学的組成物とそれを利用する方法
CN109022386B (zh) * 2018-07-12 2020-11-03 深圳市华中生物药械有限公司 重组Taq直扩酶及其制备方法、重组质粒和工程菌
US20220090194A1 (en) * 2019-01-09 2022-03-24 3Cr Bioscience Ltd. Method for detecting a nucleic acid sequence
GB2587177A (en) * 2019-01-09 2021-03-24 3Cr Bioscience Ltd Polymerase
CN110295237B (zh) * 2019-06-27 2023-07-25 河北农业大学 一种改进的鸡隐性白羽基因型的分子鉴定方法
US20230304082A1 (en) * 2020-05-29 2023-09-28 Genotech Corp. Dna polymerase variant with improved discrimination of genetic variants
CN114134220A (zh) * 2022-01-30 2022-03-04 济凡生物科技(北京)有限公司 一种可以用于血液检测的pcr反应液及其试剂盒

Family Cites Families (12)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5466591A (en) * 1986-08-22 1995-11-14 Hoffmann-La Roche Inc. 5' to 3' exonuclease mutations of thermostable DNA polymerases
EP0553264A4 (en) 1990-10-05 1994-07-13 Wayne M Barnes Thermostable dna polymerase
ES2194843T3 (es) * 1992-09-11 2003-12-01 Hoffmann La Roche Deteccion de acidos nucleicos en sangre.
US5436149A (en) * 1993-02-19 1995-07-25 Barnes; Wayne M. Thermostable DNA polymerase with enhanced thermostability and enhanced length and efficiency of primer extension
US6818431B1 (en) * 1995-10-18 2004-11-16 Shanghai Mendel Dna Center Co. Ltd. DNA polymerase having ability to reduce innate selective discrimination against fluorescent dye-labeled dideoxynucleotides
WO1999054455A1 (fr) * 1998-04-23 1999-10-28 Takara Shuzo Co., Ltd. Procede de synthese de l'adn
US6214557B1 (en) * 2000-06-06 2001-04-10 Washington University Cold sensitive mutant DNA polymerases
US6428962B1 (en) * 2001-02-12 2002-08-06 Dna Analysis, Inc. Nucleic acid collection barrier method and apparatus
US6896872B2 (en) 2001-06-27 2005-05-24 Svetlana A. Dambinova Rapid multiple panel of biomarkers in laboratory blood tests for TIA/stroke
WO2004013279A2 (en) * 2002-05-14 2004-02-12 Fidelity Systems, Inc. Helix-hairpin-helix motifs to manipulate properties of dna processing enzymes
US7462475B2 (en) 2004-05-20 2008-12-09 Dna Poleymerase Technology, Inc. Use of whole blood in PCR reactions
EP2061894A4 (en) 2006-09-14 2010-05-05 Dna Polymerase Technology Inc USE OF MUTANT TAQ POLYMERASE ENZYMES FOR DNA AMPLIFICATION IN THE PRESENCE OF PCR INHIBITORS

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
Kermekchiev, MB et al., Nucleic Acids Research, vol 31, pages 6139-6147 *

Also Published As

Publication number Publication date
US7462475B2 (en) 2008-12-09
CA2567620C (en) 2016-09-20
EP1747290B1 (en) 2014-05-07
AU2005245948A1 (en) 2005-12-01
EP1747290A4 (en) 2009-01-14
CA2567620A1 (en) 2005-12-01
US20090170060A1 (en) 2009-07-02
US20060084074A1 (en) 2006-04-20
WO2005113829A3 (en) 2008-04-03
WO2005113829A2 (en) 2005-12-01
EP1747290A2 (en) 2007-01-31
DK1747290T3 (da) 2014-08-11
US20130252309A1 (en) 2013-09-26
JP2008506417A (ja) 2008-03-06
US8470563B2 (en) 2013-06-25

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MK4 Application lapsed section 142(2)(d) - no continuation fee paid for the application