ATE538200T2 - Verfahren zur herstellung einer nukleinsäurenbibliothek - Google Patents
Verfahren zur herstellung einer nukleinsäurenbibliothek Download PDFInfo
- Publication number
- ATE538200T2 ATE538200T2 AT09004736T AT09004736T ATE538200T2 AT E538200 T2 ATE538200 T2 AT E538200T2 AT 09004736 T AT09004736 T AT 09004736T AT 09004736 T AT09004736 T AT 09004736T AT E538200 T2 ATE538200 T2 AT E538200T2
- Authority
- AT
- Austria
- Prior art keywords
- stranded
- oligonucleotide
- nucleotides
- stretch
- library
- Prior art date
Links
- 150000007523 nucleic acids Chemical class 0.000 title abstract 9
- 108020004707 nucleic acids Proteins 0.000 title abstract 8
- 102000039446 nucleic acids Human genes 0.000 title abstract 8
- 238000004519 manufacturing process Methods 0.000 title 1
- 108091034117 Oligonucleotide Proteins 0.000 abstract 24
- 239000002773 nucleotide Substances 0.000 abstract 14
- 125000003729 nucleotide group Chemical group 0.000 abstract 14
- JLCPHMBAVCMARE-UHFFFAOYSA-N [3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methyl [5-(6-aminopurin-9-yl)-2-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate Polymers Cc1cn(C2CC(OP(O)(=O)OCC3OC(CC3OP(O)(=O)OCC3OC(CC3O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c3nc(N)[nH]c4=O)C(COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3CO)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cc(C)c(=O)[nH]c3=O)n3cc(C)c(=O)[nH]c3=O)n3ccc(N)nc3=O)n3cc(C)c(=O)[nH]c3=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)O2)c(=O)[nH]c1=O JLCPHMBAVCMARE-UHFFFAOYSA-N 0.000 abstract 4
- 108091008146 restriction endonucleases Proteins 0.000 abstract 4
- 238000003776 cleavage reaction Methods 0.000 abstract 2
- 230000000295 complement effect Effects 0.000 abstract 2
- 238000000034 method Methods 0.000 abstract 2
- 230000007017 scission Effects 0.000 abstract 2
- 108091028043 Nucleic acid sequence Proteins 0.000 abstract 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1034—Isolating an individual clone by screening libraries
- C12N15/1093—General methods of preparing gene libraries, not provided for in other subgroups
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/66—General methods for inserting a gene into a vector to form a recombinant vector using cleavage and ligation; Use of non-functional linkers or adaptors, e.g. linkers containing the sequence for a restriction endonuclease
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1034—Isolating an individual clone by screening libraries
- C12N15/1068—Template (nucleic acid) mediated chemical library synthesis, e.g. chemical and enzymatical DNA-templated organic molecule synthesis, libraries prepared by non ribosomal polypeptide synthesis [NRPS], DNA/RNA-polymerase mediated polypeptide synthesis
Landscapes
- Genetics & Genomics (AREA)
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Engineering & Computer Science (AREA)
- Chemical & Material Sciences (AREA)
- Biomedical Technology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Wood Science & Technology (AREA)
- Biotechnology (AREA)
- General Engineering & Computer Science (AREA)
- Zoology (AREA)
- Organic Chemistry (AREA)
- Molecular Biology (AREA)
- Plant Pathology (AREA)
- Microbiology (AREA)
- Biophysics (AREA)
- Physics & Mathematics (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- Crystallography & Structural Chemistry (AREA)
- Bioinformatics & Computational Biology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Saccharide Compounds (AREA)
- Preparation Of Compounds By Using Micro-Organisms (AREA)
Applications Claiming Priority (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| EP08006472 | 2008-03-31 |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| ATE538200T2 true ATE538200T2 (de) | 2012-01-15 |
Family
ID=40996643
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| AT09004736T ATE538200T2 (de) | 2008-03-31 | 2009-03-31 | Verfahren zur herstellung einer nukleinsäurenbibliothek |
Country Status (8)
| Country | Link |
|---|---|
| US (1) | US9115352B2 (de) |
| EP (1) | EP2110435B2 (de) |
| JP (1) | JP5642939B2 (de) |
| AT (1) | ATE538200T2 (de) |
| DK (1) | DK2110435T4 (de) |
| ES (1) | ES2378790T5 (de) |
| PT (1) | PT2110435E (de) |
| SI (2) | SI2110435T2 (de) |
Families Citing this family (5)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| DE102012101347B4 (de) * | 2012-02-20 | 2014-01-16 | Markus Fuhrmann | Verfahren zur Herstellung einer Nukleinsäure- Bibliothek mit mindestens zwei benachbarten variablen Codon- Tripletts |
| US10017770B2 (en) * | 2014-07-03 | 2018-07-10 | Ut-Battelle, Llc | TNT cloning system |
| GB2566986A (en) | 2017-09-29 | 2019-04-03 | Evonetix Ltd | Error detection during hybridisation of target double-stranded nucleic acid |
| EP3802864A1 (de) | 2018-06-06 | 2021-04-14 | The Regents Of The University Of California | Verfahren zur herstellung von nukleinsäurebibliotheken und zusammensetzungen und kits zur durchführung davon |
| WO2024222896A1 (zh) * | 2023-04-27 | 2024-10-31 | 华大青兰生物科技(无锡)有限公司 | 靶向dna酶切方法 |
Family Cites Families (31)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US4652639A (en) * | 1982-05-06 | 1987-03-24 | Amgen | Manufacture and expression of structural genes |
| IL82064A0 (en) | 1986-04-04 | 1987-10-20 | Innogenetics Sa Nv | Vectors comprising appropriate means for an enzymatical synthesis of nucleotide sequences,particularly dna fragments |
| US5093251A (en) * | 1986-05-23 | 1992-03-03 | California Institute Of Technology | Cassette method of gene synthesis |
| US5273879A (en) * | 1987-07-23 | 1993-12-28 | Syntex (U.S.A.) Inc. | Amplification method for polynucleotide assays |
| US5132215A (en) * | 1988-09-15 | 1992-07-21 | Eastman Kodak Company | Method of making double-stranded dna sequences |
| CA2036946C (en) * | 1990-04-06 | 2001-10-16 | Kenneth V. Deugau | Indexing linkers |
| DK0533838T3 (da) | 1990-06-11 | 1998-02-23 | Nexstar Pharmaceuticals Inc | Nukleinsyreligander |
| WO1992013001A1 (en) | 1991-01-18 | 1992-08-06 | New York University | A RECEPTOR TYROSINE KINASE TARGET PROTEIN cDNA CLONING METHOD AND hGRB PROTEINS |
| JPH07507201A (ja) | 1992-03-10 | 1995-08-10 | ザ ガバメント オブ ザ ユナイテッド ステイツ オブ アメリカ,アズ レプリゼンテッド バイ ザ セクレタリー,デパートメント オブ ヘルス アンド ヒューマン サービシーズ | 可変鋳型反応 |
| DE4343591A1 (de) | 1993-12-21 | 1995-06-22 | Evotec Biosystems Gmbh | Verfahren zum evolutiven Design und Synthese funktionaler Polymere auf der Basis von Formenelementen und Formencodes |
| US5710000A (en) * | 1994-09-16 | 1998-01-20 | Affymetrix, Inc. | Capturing sequences adjacent to Type-IIs restriction sites for genomic library mapping |
| US5604097A (en) | 1994-10-13 | 1997-02-18 | Spectragen, Inc. | Methods for sorting polynucleotides using oligonucleotide tags |
| US5770365A (en) * | 1995-08-25 | 1998-06-23 | Tm Technologies, Inc. | Nucleic acid capture moieties |
| GB9618544D0 (en) | 1996-09-05 | 1996-10-16 | Brax Genomics Ltd | Characterising DNA |
| US5770380A (en) * | 1996-09-13 | 1998-06-23 | University Of Pittsburgh | Synthetic antibody mimics--multiple peptide loops attached to a molecular scaffold |
| US6110668A (en) | 1996-10-07 | 2000-08-29 | Max-Planck-Gesellschaft Zur Forderung Der Wissenschaften E.V. | Gene synthesis method |
| US5981190A (en) * | 1997-01-08 | 1999-11-09 | Ontogeny, Inc. | Analysis of gene expression, methods and reagents therefor |
| US5888737A (en) * | 1997-04-15 | 1999-03-30 | Lynx Therapeutics, Inc. | Adaptor-based sequence analysis |
| DE19736591A1 (de) * | 1997-08-22 | 1999-02-25 | Peter Prof Dr Hegemann | Verfahren zum Herstellen von Nukleinsäurepolymeren |
| US6485944B1 (en) * | 1997-10-10 | 2002-11-26 | President And Fellows Of Harvard College | Replica amplification of nucleic acid arrays |
| DE19812103A1 (de) | 1998-03-19 | 1999-09-23 | Bernauer Annette | Verfahren zur Synthese von Nucleinsäuremolekülen |
| US20020048772A1 (en) * | 2000-02-10 | 2002-04-25 | Dahiyat Bassil I. | Protein design automation for protein libraries |
| US8137906B2 (en) * | 1999-06-07 | 2012-03-20 | Sloning Biotechnology Gmbh | Method for the synthesis of DNA fragments |
| DE19925862A1 (de) | 1999-06-07 | 2000-12-14 | Diavir Gmbh | Verfahren zur Synthese von DNA-Fragmenten |
| WO2001061036A2 (en) | 2000-02-17 | 2001-08-23 | Complete Genomics As | A method of mapping restriction endonuclease cleavage sites |
| US6468749B1 (en) | 2000-03-30 | 2002-10-22 | Quark Biotech, Inc. | Sequence-dependent gene sorting techniques |
| JP2004508019A (ja) * | 2000-07-28 | 2004-03-18 | コンピュジェン インコーポレイテッド | トランスクリプトームの中に場所を占めるrna転写物及びスプライス変異体を検出するためのオリゴヌクレオチドライブラリー |
| ATE414767T1 (de) * | 2001-11-22 | 2008-12-15 | Sloning Biotechnology Gmbh | Nukleinsäure-linker und deren verwendung in der gensynthese |
| WO2003060084A2 (en) * | 2002-01-14 | 2003-07-24 | Diversa Corporation | Methods for making polynucleotides and purifying double-stranded polynucleotides |
| US20030215837A1 (en) * | 2002-01-14 | 2003-11-20 | Diversa Corporation | Methods for purifying double-stranded nucleic acids lacking base pair mismatches or nucleotide gaps |
| ATE400650T1 (de) * | 2002-10-18 | 2008-07-15 | Sloning Biotechnology Gmbh | Verfahren zur herstellung von nukleinsäuremolekülen |
-
2009
- 2009-03-30 US US12/414,174 patent/US9115352B2/en not_active Expired - Fee Related
- 2009-03-31 ES ES09004736.6T patent/ES2378790T5/es active Active
- 2009-03-31 AT AT09004736T patent/ATE538200T2/de active
- 2009-03-31 SI SI200930211A patent/SI2110435T2/sl unknown
- 2009-03-31 SI SI200930211T patent/SI2110435T1/sl unknown
- 2009-03-31 JP JP2009086490A patent/JP5642939B2/ja not_active Expired - Fee Related
- 2009-03-31 EP EP09004736.6A patent/EP2110435B2/de not_active Not-in-force
- 2009-03-31 PT PT09004736T patent/PT2110435E/pt unknown
- 2009-03-31 DK DK09004736.6T patent/DK2110435T4/da active
Also Published As
| Publication number | Publication date |
|---|---|
| US20100022410A1 (en) | 2010-01-28 |
| EP2110435B2 (de) | 2016-05-18 |
| ES2378790T3 (es) | 2012-04-17 |
| SI2110435T1 (sl) | 2012-05-31 |
| JP5642939B2 (ja) | 2014-12-17 |
| SI2110435T2 (sl) | 2016-07-29 |
| US9115352B2 (en) | 2015-08-25 |
| EP2110435A1 (de) | 2009-10-21 |
| PT2110435E (pt) | 2012-03-15 |
| ES2378790T5 (es) | 2016-10-20 |
| JP2009240310A (ja) | 2009-10-22 |
| EP2110435B1 (de) | 2011-12-21 |
| DK2110435T3 (da) | 2012-04-10 |
| DK2110435T4 (da) | 2016-08-15 |
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