ATE346169T1 - Dopplezweck -primer und -proben für verbesserte hybridisierungsassays durch zerstörung von sekundärstrukturen - Google Patents

Dopplezweck -primer und -proben für verbesserte hybridisierungsassays durch zerstörung von sekundärstrukturen

Info

Publication number
ATE346169T1
ATE346169T1 AT03255861T AT03255861T ATE346169T1 AT E346169 T1 ATE346169 T1 AT E346169T1 AT 03255861 T AT03255861 T AT 03255861T AT 03255861 T AT03255861 T AT 03255861T AT E346169 T1 ATE346169 T1 AT E346169T1
Authority
AT
Austria
Prior art keywords
secondary structure
sequence
forming region
primer
destruction
Prior art date
Application number
AT03255861T
Other languages
English (en)
Inventor
John J Quinn
Minuxe Zheng
Brian D Warner
Original Assignee
Bayer Healthcare Llc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Bayer Healthcare Llc filed Critical Bayer Healthcare Llc
Application granted granted Critical
Publication of ATE346169T1 publication Critical patent/ATE346169T1/de

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/6858Allele-specific amplification
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6832Enhancement of hybridisation reaction
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/686Polymerase chain reaction [PCR]

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Biotechnology (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
AT03255861T 2002-09-20 2003-09-18 Dopplezweck -primer und -proben für verbesserte hybridisierungsassays durch zerstörung von sekundärstrukturen ATE346169T1 (de)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
US41226302P 2002-09-20 2002-09-20

Publications (1)

Publication Number Publication Date
ATE346169T1 true ATE346169T1 (de) 2006-12-15

Family

ID=32326255

Family Applications (2)

Application Number Title Priority Date Filing Date
AT06017482T ATE469243T1 (de) 2002-09-20 2003-09-18 Dopplezweck -primer und -proben für verbesserte hybridisierungsassays durch zerstörung von sekundärstrukturen
AT03255861T ATE346169T1 (de) 2002-09-20 2003-09-18 Dopplezweck -primer und -proben für verbesserte hybridisierungsassays durch zerstörung von sekundärstrukturen

Family Applications Before (1)

Application Number Title Priority Date Filing Date
AT06017482T ATE469243T1 (de) 2002-09-20 2003-09-18 Dopplezweck -primer und -proben für verbesserte hybridisierungsassays durch zerstörung von sekundärstrukturen

Country Status (6)

Country Link
US (1) US8394944B2 (de)
EP (2) EP1428892B1 (de)
JP (1) JP2004113240A (de)
AT (2) ATE469243T1 (de)
DE (2) DE60309817T2 (de)
ES (1) ES2276016T3 (de)

Families Citing this family (18)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2005084277A2 (en) * 2004-02-27 2005-09-15 University Of Denver Method of isolating nucleic acid targets
SE0401270D0 (sv) * 2004-05-18 2004-05-18 Fredrik Dahl Method for amplifying specific nucleic acids in parallel
WO2006122002A2 (en) 2005-05-09 2006-11-16 Panomics, Inc. Multiplex capture of nucleic acids
US8632970B2 (en) 2005-05-09 2014-01-21 Affymetrix, Inc. Multiplex capture of nucleic acids
DE602006020715D1 (de) * 2005-05-12 2011-04-28 Affymetrix Inc Multiplex-assays für verzweigtkettige dna
WO2007001986A2 (en) 2005-06-20 2007-01-04 Yuling Luo Methods of detecting nucleic acids in individual cells and of identifying rare cells from large heterogeneous cell populations
US7927798B2 (en) 2005-10-05 2011-04-19 Panomics, Inc. Detection of nucleic acids from whole blood
EP1951905B1 (de) 2005-11-10 2012-04-11 Affymetrix, Inc. Nachweis von nukleinsäuren über amplifikation von stellvertreternukleinsäuren
EP3034625B1 (de) 2010-10-21 2017-10-04 Advanced Cell Diagnostics, Inc. Hochsensitives verfahren für den in-situ-nachweis von nukleinsäuren
CN104845967B (zh) * 2015-04-15 2020-12-11 苏州新海生物科技股份有限公司 寡聚核苷酸片段及使用其的选择性扩增目标核酸序列变异体的方法及应用
US20180087099A1 (en) * 2015-04-24 2018-03-29 Qiagen Gmbh Method for hybridizing a nucleic acid molecule
WO2016170179A1 (en) 2015-04-24 2016-10-27 Qiagen Gmbh Method for immobilizing a nucleic acid molecule on solid support
WO2016170182A1 (en) 2015-04-24 2016-10-27 Qiagen Gmbh Method for immobilizing a nucleic acid molecule on a solid support
CN108368543B (zh) 2015-10-12 2023-06-13 领先细胞医疗诊断有限公司 高噪声样品中原位检测核苷酸变体及相关的组合物和方法
KR102476709B1 (ko) 2016-11-21 2022-12-09 나노스트링 테크놀로지스, 인크. 화학적 조성물 및 이것을 사용하는 방법
US10844430B2 (en) 2018-01-24 2020-11-24 Qiagen Sciences, Llc DNA sequencing reaction additive
AU2019271028A1 (en) 2018-05-14 2020-12-03 Bruker Spatial Biology, Inc. Chemical compositions and methods of using same
WO2023248310A1 (ja) * 2022-06-20 2023-12-28 株式会社日立ハイテク プライマー、dna検出方法およびdna検出キット

Family Cites Families (34)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
AU602875B2 (en) * 1985-12-18 1990-11-01 British Technology Group Limited Newcastle disease virus gene clones
SE454781B (sv) * 1986-10-17 1988-05-30 Wallac Oy Hybridiseringsforfarande for detektion av polynukleotidsekvens
US5124246A (en) * 1987-10-15 1992-06-23 Chiron Corporation Nucleic acid multimers and amplified nucleic acid hybridization assays using same
US5359100A (en) * 1987-10-15 1994-10-25 Chiron Corporation Bifunctional blocked phosphoramidites useful in making nucleic acid mutimers
US5030557A (en) * 1987-11-24 1991-07-09 Ml Technology Venture Means and method for enhancing nucleic acid hybridization
US5219727A (en) 1989-08-21 1993-06-15 Hoffmann-Laroche Inc. Quantitation of nucleic acids using the polymerase chain reaction
GB8920097D0 (en) * 1989-09-06 1989-10-18 Ici Plc Amplification processes
US5200314A (en) * 1990-03-23 1993-04-06 Chiron Corporation Polynucleotide capture assay employing in vitro amplification
EP0463395B1 (de) * 1990-06-22 1997-05-14 F. Hoffmann-La Roche Ag Nachweis von schwachen Metabolisierungsreagentien von Drogen
US5849481A (en) * 1990-07-27 1998-12-15 Chiron Corporation Nucleic acid hybridization assays employing large comb-type branched polynucleotides
ES2082256T3 (es) * 1992-03-23 1996-03-16 Hoffmann La Roche Metodo de deteccion del adn.
US5827648A (en) * 1995-12-13 1998-10-27 Chiron Corporation Differential hybridization for relative quantification of variant populations
US6187538B1 (en) * 1993-12-13 2001-02-13 Bayer Corporation Differential hybridization for relative quantification of variant populations
BR9507343A (pt) * 1994-04-04 1997-09-16 Ciba Corning Diagnostics Corp Testes de hibridização - ligação para a detecção de sequências de ácido nucléico específicas
US5681702A (en) * 1994-08-30 1997-10-28 Chiron Corporation Reduction of nonspecific hybridization by using novel base-pairing schemes
US5622822A (en) * 1994-09-13 1997-04-22 Johnson & Johnson Clinical Diagnostics, Inc. Methods for capture and selective release of nucleic acids using polyethyleneimine and an anionic phosphate ester surfactant and amplification of same
US5747248A (en) * 1994-12-05 1998-05-05 Chiron Corporation Discontinuous probe design using hybritope mapping
US5981180A (en) * 1995-10-11 1999-11-09 Luminex Corporation Multiplexed analysis of clinical specimens apparatus and methods
DE69627698T2 (de) * 1995-12-05 2004-01-15 Jorn Erland Koch Eine in kaskaden verlaufende vervielfältigungsreaktion von nukleinsäuren
US6139800A (en) * 1997-06-23 2000-10-31 Luminex Corporation Interlaced lasers for multiple fluorescence measurement
AU9220498A (en) * 1997-09-04 1999-03-22 Bayer Corporation Oligonucleotide probes bearing quenchable fluorescent labels, and methods of usethereof
US6136568A (en) * 1997-09-15 2000-10-24 Hiatt; Andrew C. De novo polynucleotide synthesis using rolling templates
US6054568A (en) * 1998-01-16 2000-04-25 The Perkin-Elmer Corporation Nucleobase oligomers
EP1049807B1 (de) * 1998-01-22 2003-05-07 Luminex Corporation Mikropartikel mit multiplen fluoreszenz-signalen
EP1051517A2 (de) * 1998-01-27 2000-11-15 Clinical Micro Sensors, Inc. Amplifizierung von nukleinsäuren mit elektronischer erkennung
JP4196236B2 (ja) * 1998-03-17 2008-12-17 東洋紡績株式会社 核酸増幅用試薬および配列特異的な核酸増幅法
JP4471494B2 (ja) * 1998-05-14 2010-06-02 ルミネックス コーポレイション ダイオードレーザをベースとした測定装置
US6268147B1 (en) * 1998-11-02 2001-07-31 Kenneth Loren Beattie Nucleic acid analysis using sequence-targeted tandem hybridization
US6322980B1 (en) * 1999-04-30 2001-11-27 Aclara Biosciences, Inc. Single nucleotide detection using degradation of a fluorescent sequence
US20020051971A1 (en) 1999-05-21 2002-05-02 John R. Stuelpnagel Use of microfluidic systems in the detection of target analytes using microsphere arrays
US6287778B1 (en) * 1999-10-19 2001-09-11 Affymetrix, Inc. Allele detection using primer extension with sequence-coded identity tags
WO2001083826A2 (en) * 2000-05-03 2001-11-08 Massachusetts Institute Of Technology Methods and reagents for assembling molecules on solid supports
US6214557B1 (en) * 2000-06-06 2001-04-10 Washington University Cold sensitive mutant DNA polymerases
WO2003002762A2 (en) 2001-06-29 2003-01-09 Syngenta Participations Ag Enhanced detection and distinction of differential gene expression by enzymatic probe ligation and amplification

Also Published As

Publication number Publication date
DE60309817T2 (de) 2007-09-13
DE60332775D1 (de) 2010-07-08
ATE469243T1 (de) 2010-06-15
ES2276016T3 (es) 2007-06-16
JP2004113240A (ja) 2004-04-15
EP1785491A1 (de) 2007-05-16
US8394944B2 (en) 2013-03-12
EP1428892A1 (de) 2004-06-16
EP1428892B1 (de) 2006-11-22
DE60309817D1 (de) 2007-01-04
EP1785491B1 (de) 2010-05-26
US20040132061A1 (en) 2004-07-08

Similar Documents

Publication Publication Date Title
ATE346169T1 (de) Dopplezweck -primer und -proben für verbesserte hybridisierungsassays durch zerstörung von sekundärstrukturen
Leutenegger et al. Quantitative real-time PCR for the measurement of feline cytokine mRNA
WO2007127992A3 (en) Use of base-modified deoxynucleoside triphosphates
DE60038796D1 (de) Hochspezifische primer, amplifizierungsverfahren und kits
WO2002052031A3 (en) Nucleic acid amplification
WO2005089508A3 (en) Dna sequence detection by limited primer extension
WO2009135093A3 (en) Rnase-h-based assays utilizing modified rna monomers
RU2014144722A (ru) Композиции и способы для количественного определения последовательности нуклеиновой кислоты в образце
DE60108897D1 (de) Methoden für externe kontrollen zur nukleinsäure amplifizierung
WO2005091971A3 (en) Compositions for use in identification of alphaviruses
WO2008033442A3 (en) Methods and compositions for performing low background multiplex nucleic acid amplification reactions
EP1050587A3 (de) Erzeugung und Amplifizierung von Nukleinsäuren ausgehend von Ribonukleinsäuren
WO2004013346A3 (en) Methods and compositions for genotyping
US9121046B2 (en) Reducing template independent primer extension and threshold time for loop mediated isothermal amplification
BRPI0816047A2 (pt) conjunto de oligonucleotídeos para detecção de um ácido nucleico alvo, métodos para detecção da presença ou ausência de um ácido nucleico alvo e de pelo menos dois ácidos nucleicos alvo, kit, mistura de reação e amplicon identificado por fluorescência
WO2001092569A3 (en) Formulation for polymerase chain reaction and vessel containing same
KR930004477A (ko) 미코박테리아 프라이머 및 탐침
JP2005518217A5 (de)
NO20000538L (no) Forsterkning av spesifisiteten til nukleinsyreamplifisering ved bærer nukleinsyre
CN102317474A (zh) 用于检测乙型肝炎病毒的寡核苷酸探针及引物
EP1736543A4 (de) Verfahren zum nachweis und zur quantifizierung von endogener weizen-dna-sequenz
KR20120020067A (ko) 헤파티티스 c 바이러스 검출용 키트 및 이를 이용한 헤파티티스 c 바이러스의 검출 방법
WO2008108843A3 (en) Methods and kits for amplifying dna
CN101886131B (zh) 用两性离子化合物提高核酸杂交特异性的方法
ATE497022T1 (de) Verfahren zur amplifikation von nukleinsäure

Legal Events

Date Code Title Description
RER Ceased as to paragraph 5 lit. 3 law introducing patent treaties