WO2022078185A1 - Mutant d'interleukine-2 - Google Patents
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- WO2022078185A1 WO2022078185A1 PCT/CN2021/120510 CN2021120510W WO2022078185A1 WO 2022078185 A1 WO2022078185 A1 WO 2022078185A1 CN 2021120510 W CN2021120510 W CN 2021120510W WO 2022078185 A1 WO2022078185 A1 WO 2022078185A1
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- amino acid
- il2rα
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
- C07K14/52—Cytokines; Lymphokines; Interferons
- C07K14/54—Interleukins [IL]
- C07K14/55—IL-2
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K38/00—Medicinal preparations containing peptides
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- A61K38/17—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
- A61K38/19—Cytokines; Lymphokines; Interferons
- A61K38/20—Interleukins [IL]
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P37/00—Drugs for immunological or allergic disorders
- A61P37/02—Immunomodulators
- A61P37/04—Immunostimulants
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- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
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- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/85—Vectors or expression systems specially adapted for eukaryotic hosts for animal cells
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N5/00—Undifferentiated human, animal or plant cells, e.g. cell lines; Tissues; Cultivation or maintenance thereof; Culture media therefor
- C12N5/10—Cells modified by introduction of foreign genetic material
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K38/00—Medicinal preparations containing peptides
Definitions
- the invention belongs to the field of molecular biology, and particularly relates to an interleukin-2 mutant.
- Interleukin-2 (IL-2), discovered in 1976 and then known as T cell growth factor (TCGF), is a globular glycoprotein that plays an important role in maintaining the normal function of T lymphocytes and NK cells .
- Natural IL-2 is a polypeptide consisting of 133 amino acid residues, with a molecular weight of about 15kD, and three cysteine residues located at positions 58, 105 and 125, respectively.
- Post-translational modifications include Thr glycosylation at position 3, and cysteine residues at positions 58 and 105 form disulfide bonds, which are mainly composed of four ⁇ -helices and some linking sequences (loops) that are essential for their function. ) composed of higher-order structures (Bazan et al., Science 257, 410-413 (1992)).
- IL-2 is mainly produced by activated T cells, it can promote the proliferation and differentiation of T cells, maintain T cell activity; stimulate the generation, proliferation and activation of natural killer (NK) cells, and induce cytotoxic T lymphocytes (CTL) and induces and activates lymphokine-activated killer (LAK) and tumor-infiltrating lymphocytes; promotes the expression of cytokines and cytolytic molecules by T cells, and promotes the proliferation of B cells (Waldmann et al., Nat Rev Immunol 6, 595-601 (2009) )); these cells have or indirectly have the effect of killing foreign microbial infected cells and cancerous cells, so IL-2 has good antiviral, anticancer effects and wide clinical application potential.
- NK natural killer
- LAK lymphokine-activated killer
- IL-2 mediates its effects by binding to the IL-2 receptor (IL2R), which consists of three subunits, ⁇ (CD25), ⁇ (CD122), and ⁇ (CD132) receptor subunits.
- IL2R IL-2 receptor
- ⁇ receptors are mainly expressed on the surface of T suppressor cells (Treg) and some endothelial cells (endothelial cells), while ⁇ and ⁇ receptor subunits are highly expressed on effector T cells (Teff) and NK cells.
- T suppressor cells Te suppressor cells
- Teff effector T cells
- NK cells effector T cells
- the affinity of IL-2 for the complex form of different receptor subunits is different.
- IL-2 has the highest affinity for the complex composed of ⁇ , ⁇ and ⁇ receptor subunits.
- the affinity of the complex composed of IL-2 is moderate (about 100-fold lower), and IL-2 can transmit signals after binding to the combination of both forms of receptor subunits (Minami et al., Annu Rev Immunol 11, 245-268 ( 1993)).
- IL-2 can transmit signals after binding to the combination of both forms of receptor subunits (Minami et al., Annu Rev Immunol 11, 245-268 ( 1993)).
- High doses of IL-2 can neutralize the immunosuppression caused by Treg activation by activating a large number of effector T cells, and at the same time, there will be more toxic side effects, as well as activation induced cell apoptosis.
- IL-2 aldesleukin
- VLS is caused by the expression of high-affinity receptors ( ⁇ , ⁇ and ⁇ subunits) of IL-2 on endothelial cells (Krieg et al., Proc Nat Acad Sci USA 107, 11906-11 (2010)), so attenuation or elimination of Alpha receptor binding will reduce the function of IL-2 to promote T-suppressive cell proliferation activity, and also reduce the binding to endothelial cell alpha receptors, thereby reducing or eliminating the toxic and side effects caused by IL-2 therapy.
- high-affinity receptors ⁇ , ⁇ and ⁇ subunits
- Alpha receptor binding will reduce the function of IL-2 to promote T-suppressive cell proliferation activity, and also reduce the binding to endothelial cell alpha receptors, thereby reducing or eliminating the toxic and side effects caused by IL-2 therapy.
- the binding sites of IL-2 and ⁇ receptor subunits are mainly at amino acid positions 37, 38, 41, 42, 43, 44, 45, 61, 62, 65, 68 and 72 (Rickert.M et al. (2005). )Science 308:1477-1480), Merck and Roche or other scientific institutions made some mutations around these IL-2 surface amino acids that bind to ⁇ receptor subunits, such as Merck's mutants (R38W, F42K, WO2008003473A2) , reducing the interaction with the alpha receptor subunit to achieve effector T cell activation to enhance efficacy; while Roche's IL-2 mutants (F42A, Y45A and L72G, US 2016/0208017A1), which do not interact with alpha receptors Binding and, but can normally bind to ⁇ and ⁇ receptor subunits, and can exert effects, is currently in clinical practice.
- reducing or eliminating the interaction of IL-2 with the alpha receptor subunit may be an important aspect of treatment efficacy and reducing the side effects of treatment in cancer patients.
- the technical problem to be solved by the present invention is to provide an IL-2 mutant with reduced binding to high-affinity receptors.
- a first aspect of the present invention provides an IL-2 mutant.
- IL-2 On the basis of IL-2, one or more mutations of substitution, deletion and addition of amino acid sites related to IL2R ⁇ binding are performed to obtain An IL-2 mutant with reduced binding ability to IL2R ⁇ ; wherein, the amino acid sites related to IL2R ⁇ binding are positions 30-75 of wild-type IL-2.
- the amino acid site related to the binding of IL2R ⁇ is positions 35-75 of wild-type IL-2; alternatively, the amino acid site related to the binding of IL2R ⁇ is positions 37-75 of wild-type IL-2.
- substitution and addition of amino acid residues that select mutations that can make the IL-2 mutant structure tend to be stable and/or less energetic.
- one or more mutations of substitutions, deletions and additions are made to one or more amino acids in positions 35-45.
- amino acids at positions 35-37 and 41-43 were substituted, and amino acids at positions 38-40 were deleted.
- amino acid at position 45 was also substituted.
- amino acid position 35 is replaced by K35G or K35M; amino acid position 36 is replaced by L36G or L36H; amino acid position 37 is replaced by T37G; amino acid position 41 is replaced by T41G or T41L; amino acid position 42 is replaced by T41G or T41L
- substitution of amino acid is F42G or G42D; the substitution of amino acid 43 is K43G; the substitution of amino acid 45 is Y45G.
- substitutions, deletions and additions are made to one or two amino acids in positions 31-32.
- amino acids at positions 31-32 were substituted.
- the 31st amino acid is replaced by Y31G; the 32nd amino acid is replaced by K32G.
- cysteine at position 125 is also mutated to an amino acid with a smaller side chain.
- amino acids with smaller side chains include alanine and glycine.
- amino acid sequence of the wild-type IL-2 is shown in SEQ ID NO.1.
- amino acid sequence of the IL-2 mutant is shown in SEQ ID NO.3-7.
- a second aspect of the present invention provides an isolated polynucleotide encoding an IL-2 mutant as described above.
- a third aspect of the present invention provides an expression vector comprising an isolated polynucleotide as described above.
- a fourth aspect of the present invention provides a host cell comprising an isolated polynucleotide as described above.
- a fifth aspect of the present invention provides a composition comprising the IL-2 mutant as described above and a pharmaceutically acceptable carrier.
- the sixth aspect of the present invention provides the use of the IL-2 mutant as described above in the manufacture of a medicament or a preparation for treating a disease.
- a seventh aspect of the present invention provides the use of an IL-2 mutant as described above in the manufacture of a composition for stimulating the immune system of an individual.
- An eighth aspect of the present invention provides a method of producing an IL-2 mutant, the method comprising culturing a host cell as described above under conditions suitable for expressing the IL-2 mutant.
- IL-2 mutant of the present invention one or more mutations of substitution, deletion and addition of amino acid sites related to IL2R ⁇ binding in IL-2 are performed, thereby reducing the binding with IL2R ⁇ , and can also increase IL-2R ⁇ binding. 2
- the IL-2 mutant in the present invention is a new direction for reducing VLS or reducing or eliminating the toxic and side effects caused by IL-2 treatment.
- Figure 1 is a schematic diagram of the three-dimensional structure of IL-2 and IL2R ⁇ (PDB ID 2b5i).
- Fig. 2 is the sequence comparison diagram (part) of IL-2 mutant and IL-2wt C125A in the embodiment of the present invention.
- Fig. 3 is an SDS-PAGE electropherogram of IL-2 mutants in the examples of the present invention.
- “reduction” means adding the reducing agent 2-mercaptoethanol to the loading buffer;
- “non-reducing” means not adding the reducing agent 2-mercaptoethanol to the loading buffer.
- FIG. 4 is a CTLL2 cell proliferation experiment of IL-2 mutants in the examples of the present invention.
- the relative amino acid positions of IL-2 mutants and wild-type IL-2 are calculated based on the amino acid sequence of wild-type IL-2 (such as SEQ ID NO. 1).
- the nucleotide sequence of wild-type IL-2 is shown in SEQ ID NO.2.
- IL2R ⁇ refers to interleukin-2 receptor ⁇ , also known as “ ⁇ receptor subunit”
- IL2R ⁇ refers to interleukin-2 receptor ⁇ , also known as “ ⁇ receptor subunit”
- IL2R ⁇ refers to interleukin-2 receptor ⁇ , also known as “ ⁇ receptor subunit”
- IL2R ⁇ refers to interleukin-2 receptor ⁇ , also known as “ ⁇ receptor subunit”
- IL2R ⁇ refers to the complex formed by interleukin-2 receptor ⁇ and receptor ⁇ , also known as " ⁇ and ⁇ receptor”. body subunit complex”.
- mutation includes substitutions, deletions and additions to amino acids.
- the amino acid sites in IL-2 that are related to the binding of IL2R ⁇ , that is, positions 30-75 are mutated.
- the base sequence for mutation can be IL-2 wild type, or it can be 80%, 85%, 88%, 90%, 91%, 92%, 93%, 94%, 80%, 85%, 88%, 90%, 91%, 92%, 93%, 94%, Sequences of 95%, 96%, 97%, 98%, 99% and more than 99% homology.
- one or more of substitutions, deletions and additions are made to one or more of amino acids at positions 35-45 to reduce binding of the IL-2 mutant to IL2R ⁇ .
- one or more of substitutions, deletions and additions are made to one or more of amino acids 31-32 and 35-45 to reduce the interaction of the IL-2 mutant with IL2R ⁇ . combine.
- IL-2 is located at the 37th, 38th, 41st, 42nd, 43rd, 44th, 45th, 61st, 62th, 65th, 68th and 72nd amino acid positions and IL2R ⁇ . Therefore, through bioinformatics and protein engineering design, mutations, deletions, and additions were performed at the 30th to 75th amino acids to change the binding of IL-2 to IL2R ⁇ .
- amino acid sequences of the obtained IL-2 mutants are shown in Table 1:
- Expression hosts can be E. coli or mammalian cells.
- IL-2wt(C125A) and the mutant were expressed respectively, and purified and prepared relying on the HPC4 tag carried at the C-terminal of the molecule.
- IL-2wt C125A, SEQ ID NO.1
- DH10B was transformed, sequenced and maintained to obtain the desired IL-2 wild-type and mutant plasmids.
- IL-2wt (C125A) and IL-2 mutant were prepared.
- G418 solution Weigh 250mg Geneticin TM , add 4.5ml ultrapure water to dissolve, dilute to 5ml ultrapure water, filter with 0.22um membrane, store at -20°C
- PEI solution Weigh 50mg PEI, add 45ml ultrapure water to dissolve, adjust pH to 7.0 with 1M NaOH, dilute to 50ml ultrapure water, filter with 0.22um membrane, and store at -20°C
- Plasmids were prepared in advance in 2 ml endotoxin-depleted centrifuge tubes.
- Solution A Plasmid 1 ⁇ g/mL + Opti-MEM TM 33.3ul/mL
- Liquid B PEI 2 ⁇ g/mL+Opti-MEM TM 33.3ul/mL
- the cell supernatant was collected by centrifugation at 8500 rpm for 15 min.
- IL-2wt(C125A) and IL-2 mutants are C-terminally tagged with HPC4 and can therefore be affinity purified using HPC4 antibody-conjugated media followed by gel filtration chromatography (superdex200) for further purification The protein with higher purity was obtained. After purification, it was estimated that the expression level of IL-2wt C125A was ⁇ 9.9 mg/L, and the expression levels of 384 and 386 were 18.6 mg/L and 19.6 mg/L, respectively. SDS-PAGE analysis was performed according to the method described in "Molecular Cloning", and the results are shown in Figure 3.
- the proteins used in the experiments were all produced by our company, and IL2R ⁇ -his, IL2R ⁇ -Fc/Fc and IL2 mutants were obtained by transient expression and affinity purification of HEK293.
- Buffer formulation (10 mM HEPES, 150 mM NaCl, 3 mM EDTA, 0.1% BSA and 0.05% Tween 20); ProA sensor (Pall Fortebio, Catalog #18-5010); HISIK sensor (Pall Fortebio, Catalog #18) -5120); BLI equipment is Octet RED96 produced by Pall Fortebio Company; Data acquisition and analysis work were carried out with Data acquisition 11.0 and Data analysis 11.0 software respectively.
- IL2R ⁇ -Fc/Fc was diluted with buffer to a concentration of 10ug/ml, added to the second column of the 96-well assay plate, and the control program was set to Loading, 600s.
- the IL2 mutant was diluted to 100nM with buffer, then 1:1 serially diluted down 6 gradients (7 gradients in total) to a concentration of 1.625nM and a concentration of 0, added to the 96-well assay plate 5-9 columns, respectively, control program Medium is set to Association, 200s. Buffer was added to columns 1, 4, 10, and 11 of the 96-well assay plate, and glycine with pH 1.7 was added to column 12. The sample volumes of the above samples and solutions were both 200ul.
- CTLL-2 T cell
- the proliferation assay of CTLL-2 is a commonly used assay to measure the activity of interleukin-stimulated immune cells at the cellular level. Therefore, the biological activity of IL-2 mutants was examined here by proliferation experiments of CTLL-2 cells.
- CTLL-2 cells Resuspend the cells in culture medium containing FBS and Rat-T-Stim.
- MTS addition add 20 ⁇ l to each well AQueous One Solution Reagent, 37 degrees, 5% CO 2 incubate for 2 to 4 hours.
Abstract
La présente invention divulgue un mutant d'IL-2. Sur la base de l'IL-2 humaine, les sites d'acides aminés associés à une liaison à l'IL2Rα sont soumis à une ou plusieurs mutations par substitution, délétion et addition pour obtenir un mutant d'IL-2 présentant une capacité de liaison réduite à l'IL2Rα, les sites d'acides aminés associés à la liaison à l'IL2Rα étant les positions 30 à 75 de l'IL-2 de type sauvage. L'interaction entre le mutant d'IL-2 de la présente invention et l'IL2Rα est réduite et la quantité d'expression est augmentée.
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CN202011114023.7 | 2020-10-18 | ||
CN202011114023 | 2020-10-18 | ||
CN202110597623.1 | 2021-05-31 | ||
CN202110597623.1A CN114369153A (zh) | 2020-10-18 | 2021-05-31 | 一种白介素-2突变体 |
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AU2022320553A1 (en) * | 2021-07-30 | 2024-02-01 | Yunquan Biotechnology (Beijing) Co., Ltd. | Human interleukin-2 variant and use thereof |
CN117903283A (zh) * | 2022-10-19 | 2024-04-19 | 北京志道生物科技有限公司 | 一种il-2突变体 |
Citations (5)
Publication number | Priority date | Publication date | Assignee | Title |
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WO2009061853A2 (fr) * | 2007-11-05 | 2009-05-14 | Massachusetts Institute Of Technology | Polypeptides d'interleukine-2 (il-2) mutants |
CN103492411A (zh) * | 2011-02-10 | 2014-01-01 | 罗切格利卡特公司 | 突变体白介素-2多肽 |
TN2013000151A1 (en) * | 2011-11-10 | 2014-11-10 | Centro Inmunologia Molecular | Polypeptides derived from il-2 having agonist activity for the therapy of cancer and chronic infections |
CN104231068A (zh) * | 2014-01-27 | 2014-12-24 | 苏州发士达生物科技有限公司 | 人白细胞介素ii突变体及其应用 |
CN111018961A (zh) * | 2019-12-17 | 2020-04-17 | 北京志道生物科技有限公司 | 白介素-2衍生物 |
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- 2021-05-31 CN CN202110597623.1A patent/CN114369153A/zh active Pending
- 2021-09-25 WO PCT/CN2021/120510 patent/WO2022078185A1/fr active Application Filing
Patent Citations (5)
Publication number | Priority date | Publication date | Assignee | Title |
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WO2009061853A2 (fr) * | 2007-11-05 | 2009-05-14 | Massachusetts Institute Of Technology | Polypeptides d'interleukine-2 (il-2) mutants |
CN103492411A (zh) * | 2011-02-10 | 2014-01-01 | 罗切格利卡特公司 | 突变体白介素-2多肽 |
TN2013000151A1 (en) * | 2011-11-10 | 2014-11-10 | Centro Inmunologia Molecular | Polypeptides derived from il-2 having agonist activity for the therapy of cancer and chronic infections |
CN104231068A (zh) * | 2014-01-27 | 2014-12-24 | 苏州发士达生物科技有限公司 | 人白细胞介素ii突变体及其应用 |
CN111018961A (zh) * | 2019-12-17 | 2020-04-17 | 北京志道生物科技有限公司 | 白介素-2衍生物 |
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