WO2016177862A1 - Heterocyclic compounds and their use in preventing or treating bacterial infections - Google Patents

Heterocyclic compounds and their use in preventing or treating bacterial infections Download PDF

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Publication number
WO2016177862A1
WO2016177862A1 PCT/EP2016/060142 EP2016060142W WO2016177862A1 WO 2016177862 A1 WO2016177862 A1 WO 2016177862A1 EP 2016060142 W EP2016060142 W EP 2016060142W WO 2016177862 A1 WO2016177862 A1 WO 2016177862A1
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WIPO (PCT)
Prior art keywords
mmol
oxo
alkyl
diazabicyclo
oct
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Ceased
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PCT/EP2016/060142
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English (en)
French (fr)
Inventor
Julien Barbion
Audrey Caravano
Sophie Chasset
Francis Chevreuil
Nicolas Lecointe
Benoit Ledoussal
Frédéric LE STRAT
Sébastien Richard
Christophe Simon
Sophie VOMSCHEID
Julie BRIAS
Sophia BRIET
Fabien Faivre
Géraldine LE FRALLIEC
Chrystelle Oliveira
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Mutabilis SA
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Mutabilis SA
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Filing date
Publication date
Priority claimed from EP15305701.3A external-priority patent/EP3091018A1/en
Priority to JP2017558028A priority Critical patent/JP6767392B2/ja
Priority to MX2017014080A priority patent/MX2017014080A/es
Priority to KR1020177031802A priority patent/KR102713561B1/ko
Priority to US15/571,964 priority patent/US10183943B2/en
Priority to CN201680026527.9A priority patent/CN107580595B/zh
Priority to RU2017135321A priority patent/RU2741496C2/ru
Priority to BR112017023359A priority patent/BR112017023359A2/pt
Priority to AU2016257338A priority patent/AU2016257338B2/en
Priority to EP16725377.2A priority patent/EP3292125B1/en
Priority to NZ736152A priority patent/NZ736152B2/en
Application filed by Mutabilis SA filed Critical Mutabilis SA
Priority to CA2983674A priority patent/CA2983674A1/en
Publication of WO2016177862A1 publication Critical patent/WO2016177862A1/en
Anticipated expiration legal-status Critical
Ceased legal-status Critical Current

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Classifications

    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07D—HETEROCYCLIC COMPOUNDS
    • C07D471/00—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00
    • C07D471/02—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed system contains two hetero rings
    • C07D471/08—Bridged systems
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00—Medicinal preparations containing organic active ingredients
    • A61K31/33—Heterocyclic compounds
    • A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
    • A61K31/435—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with one nitrogen as the only ring hetero atom
    • A61K31/439—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with one nitrogen as the only ring hetero atom the ring forming part of a bridged ring system, e.g. quinuclidine
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00—Medicinal preparations containing organic active ingredients
    • A61K31/33—Heterocyclic compounds
    • A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
    • A61K31/435—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with one nitrogen as the only ring hetero atom
    • A61K31/44—Non condensed pyridines; Hydrogenated derivatives thereof
    • A61K31/4427—Non condensed pyridines; Hydrogenated derivatives thereof containing further heterocyclic ring systems
    • A61K31/444—Non condensed pyridines; Hydrogenated derivatives thereof containing further heterocyclic ring systems containing a six-membered ring with nitrogen as a ring heteroatom, e.g. amrinone
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00—Medicinal preparations containing organic active ingredients
    • A61K31/33—Heterocyclic compounds
    • A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
    • A61K31/495—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with two or more nitrogen atoms as the only ring heteroatoms, e.g. piperazine or tetrazines
    • A61K31/4965—Non-condensed pyrazines
    • A61K31/497—Non-condensed pyrazines containing further heterocyclic rings
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00—Medicinal preparations containing organic active ingredients
    • A61K31/33—Heterocyclic compounds
    • A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
    • A61K31/495—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with two or more nitrogen atoms as the only ring heteroatoms, e.g. piperazine or tetrazines
    • A61K31/50—Pyridazines; Hydrogenated pyridazines
    • A61K31/501—Pyridazines; Hydrogenated pyridazines not condensed and containing further heterocyclic rings
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00—Medicinal preparations containing organic active ingredients
    • A61K31/33—Heterocyclic compounds
    • A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
    • A61K31/495—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with two or more nitrogen atoms as the only ring heteroatoms, e.g. piperazine or tetrazines
    • A61K31/505—Pyrimidines; Hydrogenated pyrimidines, e.g. trimethoprim
    • A61K31/506—Pyrimidines; Hydrogenated pyrimidines, e.g. trimethoprim not condensed and containing further heterocyclic rings
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00—Medicinal preparations containing organic active ingredients
    • A61K31/33—Heterocyclic compounds
    • A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
    • A61K31/495—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with two or more nitrogen atoms as the only ring heteroatoms, e.g. piperazine or tetrazines
    • A61K31/505—Pyrimidines; Hydrogenated pyrimidines, e.g. trimethoprim
    • A61K31/513—Pyrimidines; Hydrogenated pyrimidines, e.g. trimethoprim having oxo groups directly attached to the heterocyclic ring, e.g. cytosine
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00—Medicinal preparations containing organic active ingredients
    • A61K31/33—Heterocyclic compounds
    • A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
    • A61K31/54—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with at least one nitrogen and one sulfur as the ring hetero atoms, e.g. sulthiame
    • A61K31/542—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with at least one nitrogen and one sulfur as the ring hetero atoms, e.g. sulthiame ortho- or peri-condensed with heterocyclic ring systems
    • A61K31/545—Compounds containing 5-thia-1-azabicyclo [4.2.0] octane ring systems, i.e. compounds containing a ring system of the formula:, e.g. cephalosporins, cefaclor, or cephalexine
    • A61K31/546—Compounds containing 5-thia-1-azabicyclo [4.2.0] octane ring systems, i.e. compounds containing a ring system of the formula:, e.g. cephalosporins, cefaclor, or cephalexine containing further heterocyclic rings, e.g. cephalothin
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/04—Antibacterial agents
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07D—HETEROCYCLIC COMPOUNDS
    • C07D513/00—Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for in groups C07D463/00, C07D477/00 or C07D499/00 - C07D507/00
    • C07D513/02—Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for in groups C07D463/00, C07D477/00 or C07D499/00 - C07D507/00 in which the condensed system contains two hetero rings
    • C07D513/04—Ortho-condensed systems
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07D—HETEROCYCLIC COMPOUNDS
    • C07D519/00—Heterocyclic compounds containing more than one system of two or more relevant hetero rings condensed among themselves or condensed with a common carbocyclic ring system not provided for in groups C07D453/00 or C07D455/00
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A50/00—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
    • Y02A50/30—Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change

Definitions

  • any nitrogen atom present within a heterocycle or present within group wherein it is trisubstituted thus forming a tertiary amino group, can be further quaternized by a methyl group.
  • T 1 represents an unsubstituted or substituted by one or more T 2 , (C C 3 )-alkyl; (CH 2 ) m OQ 1 , -(CH 2 ) m -C(0)NQ 1 Q 2 ; (CH 2 ) m C(0)OQ 1 , (CH 2 ) m NQ 1 Q 2 , wherein T 2 , m Q 1 and Q 2 are as defined above.
  • base addition salts include ammonium salts such as tromethamine, meglumine, epolamine, etc, metal salts such as sodium, lithium, potassium, calcium, zinc or magnesium salts with organic bases such as dicyclohexylamine salts, N-methyl-D-glucamine.
  • suitable salts may be found in Remington's Pharmaceutical Sciences, 17 th ed., Mack Publishing Company, Easton, PA, 1985, p. 1418, P.H. Stahl, C.G. Wermuth, Handbook of Pharmaceutical salts - Properties, Selection and Use, Wiley-VCH, 2002 and S.M. Berge et al. "Pharmaceutical Salts" J. Pharm. Sci, 66: p.1 -19 (1977).
  • Reaction mixture was filtered on celite®, washed with MeOH (50 mL). The filtrate was diluted with EtOAc (250 mL) and cooled down to 0 °C. 0.1 M aqueous hydrochloric acid was added to reach pH 5-6. Aqueous layer was extracted with EtOAc (3 x 75 mL). Combined organic layers were dried over Na 2 S0 4 , filtered and concentrated under reduced pressure.
  • Step 1 preparation of intermediate 6-allyloxy-4-(2-methylpyrazol-3-yl)-1 ,6- diazabicyclo[3.2.11oct-3-en-7-one (2a)
  • step 6 the intermediate 6-allyloxy-4- (oxazol-2-yl)-1 ,6-diazabicyclo[3.2.1 ]oct-3-en-7-one (4a) (71 mg, 0.287 mmol) is converted into triphenyl-(propenyl)-phosphonium [4-(oxazol-2-yl)-7-oxo-1 ,6-diazabicyclo[3.2.1 ]oct-3- en-6-yl] sulfate (4b) as an amorphous solid after purification by flash chromatography on silica gel (DCM/acetone from 80/20 to 10/90).
  • DCM/acetone from 80/20 to 10/90
  • Step 2 preparation of intermediate triphenvHpropenvD-phosphonium [4-(3-pyridyl)-7- oxo-1 ,6-diazabicvclof3.2.1 loct-3-en-6-yll sulfate (9b)
  • step 1 the intermediate (6-allyloxy-4- (4,4,5, 5-tetramethyl-1 ,3,2-dioxaborolan-2-yl)-1 ,6-diazabicyclo[3.2.1]oct-3-en-7-one (8a) (50 mg, 0.163 mmol) is converted into 6-allyloxy-4-(2-pyridyl)-1 ,6-diazabicyclo[3.2.1]oct-3- en-7-one (11a) (19 mg, 0.074 mmol, 45%) using 2-bromopyridine (31 mg, 0.196 mmol), PEPPSI catalyst (22 mg, 0.032 mmol) and after purification by chromatography on silica gel (DCM/acetone 100/0 to 80/20).
  • 2-bromopyridine 31 mg, 0.196 mmol
  • PEPPSI catalyst 22 mg, 0.032 mmol
  • step 6 the intermediate 6-allyloxy-4- (pyrazin-2-yl)-1,6-diazabicyclo[3.2.1]oct-3-en-7-one (12a) (57 mg, 0.220 mmol) was converted into triphenyl-(propenyl)-phosphonium [4-(pyrazin-2-yl)-7-oxo-1 ,6- diazabicyclo[3.2.1]oct-3-en-6-yl] sulfate (12b) as an amorphous solid which was used in the next step without purification.
  • Step 3 preparation of sodium [4-(1 -methyl-2-oxo-4-pyridyl)-7-oxo-1 .6- diazabicvclo[3.2.1 loct-3-en-6-yll sulfate (Example 13)
  • Step 1 preparation of intermediate 6-allyloxy-4-(1-methyl-6-oxo-pyridazin-3-yl)-1,6- diazabicvclo[3.2.11oct-3-en-7-one (17a)
  • Example 33 synthesis of sodium [3-(4-pyridyl)-7-oxo-1 ,6-diazabicyclo[3.2.11oct-3-en-6-yl1 sulfate

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  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Pharmacology & Pharmacy (AREA)
  • Animal Behavior & Ethology (AREA)
  • General Health & Medical Sciences (AREA)
  • Public Health (AREA)
  • Veterinary Medicine (AREA)
  • Medicinal Chemistry (AREA)
  • Epidemiology (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Oncology (AREA)
  • General Chemical & Material Sciences (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
  • Communicable Diseases (AREA)
  • Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
  • Nitrogen Condensed Heterocyclic Rings (AREA)
  • Nitrogen And Oxygen Or Sulfur-Condensed Heterocyclic Ring Systems (AREA)
  • Medicines That Contain Protein Lipid Enzymes And Other Medicines (AREA)
PCT/EP2016/060142 2015-05-07 2016-05-06 Heterocyclic compounds and their use in preventing or treating bacterial infections Ceased WO2016177862A1 (en)

Priority Applications (11)

Application Number Priority Date Filing Date Title
CA2983674A CA2983674A1 (en) 2015-05-07 2016-05-06 Heterocyclic compounds and their use in preventing or treating bacterial infections
BR112017023359A BR112017023359A2 (pt) 2015-05-07 2016-05-06 ?compostos, composições farmacêuticas e kits?
KR1020177031802A KR102713561B1 (ko) 2015-05-07 2016-05-06 헤테로사이클릭 화합물 및 세균성 감염을 예방 또는 치료하는 이의 용도
US15/571,964 US10183943B2 (en) 2015-05-07 2016-05-06 Heterocyclic compounds and their use in preventing or treating bacterial infections
CN201680026527.9A CN107580595B (zh) 2015-05-07 2016-05-06 杂环化合物及它们在预防或治疗细菌感染中的应用
RU2017135321A RU2741496C2 (ru) 2015-05-07 2016-05-06 Гетероциклические соединения и их применение в лечении или предотвращении бактериальных инфекций
EP16725377.2A EP3292125B1 (en) 2015-05-07 2016-05-06 Heterocyclic compounds and their use in preventing or treating bacterial infections
JP2017558028A JP6767392B2 (ja) 2015-05-07 2016-05-06 複素環式化合物及び細菌感染の治療又は予防におけるその使用
AU2016257338A AU2016257338B2 (en) 2015-05-07 2016-05-06 Heterocyclic compounds and their use in preventing or treating bacterial infections
NZ736152A NZ736152B2 (en) 2016-05-06 Heterocyclic compounds and their use in preventing or treating bacterial infections
MX2017014080A MX2017014080A (es) 2015-05-07 2016-05-06 Compuestos heterociclicos y su uso en la prevencion o tratamiento de las infecciones bacterianas.

Applications Claiming Priority (4)

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EP15305701.3 2015-05-07
EP15305701.3A EP3091018A1 (en) 2015-05-07 2015-05-07 Heterocyclic compounds and their use in preventing or treating bacterial infections
EP16305144 2016-02-08
EP16305144.4 2016-02-08

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US (1) US10183943B2 (enExample)
EP (1) EP3292125B1 (enExample)
JP (1) JP6767392B2 (enExample)
KR (1) KR102713561B1 (enExample)
CN (1) CN107580595B (enExample)
AU (1) AU2016257338B2 (enExample)
BR (1) BR112017023359A2 (enExample)
CA (1) CA2983674A1 (enExample)
CL (1) CL2017002803A1 (enExample)
MX (1) MX2017014080A (enExample)
RU (1) RU2741496C2 (enExample)
TW (1) TWI754613B (enExample)
WO (1) WO2016177862A1 (enExample)

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US9883867B2 (en) 2015-07-14 2018-02-06 Atricure, Inc. Surgical tool
EP3301094A1 (en) * 2016-09-30 2018-04-04 Mutabilis Heterocyclic compounds and their use in preventing or treating bacterial infections
EP3300736A1 (en) * 2016-09-30 2018-04-04 Mutabilis Composition comprising antibiotic compound and an heterocyclic compound and their use in preventing or treating bacterial infections
EP3357924A1 (en) 2017-02-06 2018-08-08 Mutabilis Novel heterocyclic compounds and their use in preventing or treating bacterial infections
US11905286B2 (en) 2018-08-09 2024-02-20 Antabio Sas Diazabicyclooctanones as inhibitors of serine beta-lactamases
US12378244B2 (en) 2018-08-09 2025-08-05 Antabio Sas Diazabicyclooctanones as inhibitors of serine β-lactamases

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Cited By (13)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US9883867B2 (en) 2015-07-14 2018-02-06 Atricure, Inc. Surgical tool
AU2017335222C1 (en) * 2016-09-30 2022-01-20 Mutabilis Heterocyclic compounds and their use in preventing or treating bacterial infections
EP3300736A1 (en) * 2016-09-30 2018-04-04 Mutabilis Composition comprising antibiotic compound and an heterocyclic compound and their use in preventing or treating bacterial infections
WO2018060484A1 (en) * 2016-09-30 2018-04-05 Mutabilis Composition comprising antibiotic compound and an heterocyclic compound and their use in preventing or treating bacterial infections
WO2018060481A1 (en) * 2016-09-30 2018-04-05 Mutabilis Heterocyclic compounds and their use in preventing or treating bacterial infections
US10722520B2 (en) 2016-09-30 2020-07-28 Mutabilis Heterocyclic compounds and their use in preventing or treating bacterial infections
AU2017335222B2 (en) * 2016-09-30 2021-07-15 Mutabilis Heterocyclic compounds and their use in preventing or treating bacterial infections
EP3301094A1 (en) * 2016-09-30 2018-04-04 Mutabilis Heterocyclic compounds and their use in preventing or treating bacterial infections
EP4086255A1 (en) * 2016-09-30 2022-11-09 Mutabilis Heterocyclic compounds and their use in preventing or treating bacterial infections
EP3357924A1 (en) 2017-02-06 2018-08-08 Mutabilis Novel heterocyclic compounds and their use in preventing or treating bacterial infections
WO2018141986A1 (en) 2017-02-06 2018-08-09 Mutabilis Novel heterocyclic compounds and their use in preventing or treating bacterial infections
US11905286B2 (en) 2018-08-09 2024-02-20 Antabio Sas Diazabicyclooctanones as inhibitors of serine beta-lactamases
US12378244B2 (en) 2018-08-09 2025-08-05 Antabio Sas Diazabicyclooctanones as inhibitors of serine β-lactamases

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JP6767392B2 (ja) 2020-10-14
NZ736152A (en) 2024-09-27
CN107580595B (zh) 2020-09-18
CL2017002803A1 (es) 2018-05-11
AU2016257338B2 (en) 2020-03-05
CA2983674A1 (en) 2016-11-10
KR20180002650A (ko) 2018-01-08
AU2016257338A1 (en) 2017-10-26
CN107580595A (zh) 2018-01-12
TW201643165A (zh) 2016-12-16
MX2017014080A (es) 2018-07-06
TWI754613B (zh) 2022-02-11
RU2017135321A3 (enExample) 2019-08-13
US10183943B2 (en) 2019-01-22
US20180093985A1 (en) 2018-04-05
BR112017023359A2 (pt) 2018-07-17
JP2018515504A (ja) 2018-06-14
KR102713561B1 (ko) 2024-10-08
EP3292125A1 (en) 2018-03-14
RU2741496C2 (ru) 2021-01-26
EP3292125B1 (en) 2019-09-04

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