WO2009112529A1 - Novel method for the production of sulphonylpyrroles as hdac inhibitors - Google Patents

Novel method for the production of sulphonylpyrroles as hdac inhibitors Download PDF

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Publication number
WO2009112529A1
WO2009112529A1 PCT/EP2009/052870 EP2009052870W WO2009112529A1 WO 2009112529 A1 WO2009112529 A1 WO 2009112529A1 EP 2009052870 W EP2009052870 W EP 2009052870W WO 2009112529 A1 WO2009112529 A1 WO 2009112529A1
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formula
compound
alkyl
alkoxy
group
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PCT/EP2009/052870
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English (en)
French (fr)
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Matthias Müller
Bernd Müller
Thomas Maier
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4Sc Ag
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Priority to CN2009801082773A priority Critical patent/CN101970404B/zh
Priority to AT09721108T priority patent/ATE519739T1/de
Priority to BRPI0909752A priority patent/BRPI0909752B8/pt
Priority to NZ587824A priority patent/NZ587824A/en
Priority to UAA201011865A priority patent/UA102091C2/ru
Priority to SI200930103T priority patent/SI2265580T1/sl
Priority to EP09721108A priority patent/EP2265580B1/en
Application filed by 4Sc Ag filed Critical 4Sc Ag
Priority to MX2010010015A priority patent/MX2010010015A/es
Priority to EA201001270A priority patent/EA017929B1/ru
Priority to JP2010550194A priority patent/JP5530939B2/ja
Priority to CA2719074A priority patent/CA2719074C/en
Priority to PL09721108T priority patent/PL2265580T3/pl
Priority to AU2009224623A priority patent/AU2009224623C1/en
Priority to US12/921,928 priority patent/US8785659B2/en
Priority to DK09721108.0T priority patent/DK2265580T3/da
Publication of WO2009112529A1 publication Critical patent/WO2009112529A1/en
Priority to IL207995A priority patent/IL207995A/en
Priority to ZA2010/06422A priority patent/ZA201006422B/en
Priority to HK11105798.0A priority patent/HK1150319A1/xx

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    • C07D207/46—Heterocyclic compounds containing five-membered rings not condensed with other rings, with one nitrogen atom as the only ring hetero atom with hetero atoms directly attached to the ring nitrogen atom
    • C07D207/48—Sulfur atoms
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    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07D—HETEROCYCLIC COMPOUNDS
    • C07D403/00—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00
    • C07D403/02—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00 containing two hetero rings
    • C07D403/12—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00 containing two hetero rings linked by a chain containing hetero atoms as chain links

Definitions

  • the invention relates to a novel production method of N-sulphonylpyrrole derivatives and salts thereof, which are used in the pharmaceutical industry for the production of pharmaceutical compositions.
  • Transcriptional regulation in cells is a complex biological process.
  • One basic principle is regulation by posttranslational modification of histone proteins, namely histone proteins H2A/B, H3 and H4 forming the octameric histone core complex.
  • Histone acetylation and deacetyiation is catalysed by histone acetyltransferases (HATs) and histone deacetylases (HDACs).
  • HATs histone acetyltransferases
  • HDACs histone deacetylases
  • HDACs HDACs 1-3, 8
  • Mr 42-55 kDa primarily located in the nucleus and sensitive towards inhibition by Trichostatin A (TSA)
  • TSA Trichostatin A
  • TSA sensitivity Sir2 homologues
  • Benzoyl or acetyl substituted pyrrolyl propenamides are described in the public literature as HDAC-inhibitors, whereas the connectivity of the acyi-group is at position 2 or 3 of the pyrrole scaffold. (Mai et.al., Journal Med.Chem. 2004, Vol. 47, No. 5, 1098-1109; or Ragno et al., Journal Med. Chem. 2004, Vol. 47, No. 5, 1351-1359). Further pyrrolyl substituted hydroxamic acid derivatives are described in US4960787 as lipoxygenase inhibitors or in US6432999 as cyclooxygenase inhibitors or in EP570594 as inhibitors of cell growth.
  • WO 2005/087724, WO 2007/039403 and WO 2007/039404 also disclose a process for the preparation of said N-hydroxy-acryiamide derivatives.
  • O-(tetrahydro ⁇ 2H-pyran-2-yl ⁇ hydroxylamine and EDCxHCI is, however, a disadvantage not only under cost aspects but also because these reagents are not available in large quantities.
  • O-(tetrahydro-2H-pyran-2- yl)hydroxylamine is explosive and it is necessary to remove the byproducts an additional purification step, e.g. column chromatography.
  • An object of the invention therefore is to provide a commercially attractive, less expensive but at ieast equally effective process for preparing N-hydroxy- acrylamide derivatives of N-sulphonylpyrrole compounds, which derivatives have HDAC inhibitory activity, which allows obtaining the reaction product in fewer steps and with high yield and purity.
  • a novel process for the preparation of N-hydroxy-acryiarnide derivatives of N-sulphonylpyrroie compounds having HDAC inhibitory activity comprising a step of transforming an acrylic acid chloride intermediate into the corresponding N-hydroxy acrylamide derivative.
  • this reaction can be conducted with aqueous hydroxylamine without the formation of acrylic acid by-products and leads to the formation of the free base of the corresponding N-hydroxy-acrylamide N-sulphonylpyrrole or its respective hydrochloride.
  • the newly developed preparation process of N-hydroxy-acrylamide derivatives of N-sufphonylpyrrole compounds having HDAC inhibitory activity provides the advantages of being much more cost effective than the process known form the prior art and of enabling the direct formation of N-hydroxy-acry ⁇ amides without the necessity of the additional steps of de-protection and purification.
  • the present invention thus relates in a first general aspect to a novel process for the preparation of a compound of formuia I 1 which is an N-hydroxy-acrylamide derivative of an N-sulphonylpyrrole compound and has HDAC inhibitory activity:
  • R1 is hydrogen, 1-4C-aikyl, halogen, or 1-4C-alkoxy
  • R2 is hydrogen or 1-4C-alkyl
  • R3 is hydrogen or 1-4C-aIkyl
  • R4 is hydrogen, 1-4C-a!kyi, haiogen, or 1-4C-alkoxy
  • R5 is hydrogen, 1-4C-alkyl, halogen, or 1 -4C-alkoxy
  • T1 is a bond
  • Ar1 is phenyl, or R61- and/or R62-substituted phenyl, wherein
  • R61 is 1-4C-alkyI, or -T2-N(R611 )R612, wherein
  • T2 is a bond
  • R612 1-4C-alkyl, or 1-4C-alkoxy-2-4C-aikyl, or R611 and R612 together and with inclusion of the nitrogen atom, to which they are bonded, form a heterocyclic ring Het1 , wherein Het1 is morpholino, thiomorpholino, S-oxo-thiomorphoiino, S,S-dioxo- thiomorpholino, piperidino, or pyrrolidino,
  • T2 is 1-4C-alkylene, or 2-4C-aJkylene interrupted by oxygen, and R611 is 1-4C-aikyl, 1-4C-alkoxy-2-4C-aIkyl, or phenyl-1-4C ⁇ aikyl, R612 is 1-4C-alkyl, or 1-4C-aikoxy-2-4C-alkyi, or
  • R62 is 1-4C-alkyI, 1-4C-alkoxy, halogen, cyano, 1-4C-alkoxy-1-4C-alkyl, 1-4C- alkylcarbonylamino, or 1-4C-alkylsulphonylamino,
  • Aa1 is a bisaryl radical made up of two aryl groups, which are selected independently from a group consisting of phenyl and naphthyl, and which are linked together via a single bond,
  • Hh1 is a bisheteroaryl radical made up of two heteroary ⁇ groups, which are selected independently from a group consisting of monocyclic 5- or 6- membered heteroaryl radicals comprising one or two heteroatoms, each of which is selected from the group consisting of nitrogen, oxygen and sulfur, and which are linked together via a single bond,
  • Ah1 is a heteroaryl-aryl radical or an aryl-heteroaryl radical made up of a heteroaryl group selected from a group consisting of monocyclic 5- or 6-membered heteroaryl radicals comprising one or two heteroatoms, each of which is selected from the group consisting of nitrogen, oxygen and sulfur, and an aryl group selected from a group consisting of phenyl and naphthyl, whereby said heteroaryl and aryl groups are linked together via a single bond, wherein Aa1 , Hh1 and Ah1 may be optionally substituted by R63 and/or R64, wherein
  • R63 is 1-4C-alkyl, phenyl-1-4C-alkyl, 1-4C-alkoxy, trifluoromethyl, cyano, halogen, completely or predominantly fluorine-substituted 1-4C-alkoxy, 1-4C- alkoxy-1-4C-alkyl, 1-4C-alkylsulphonylamino, tolylsulphonylamino, phenylsulphonyiamino, 1-4C-alkylcarbonylamino, carbamoyl, mono- or di-1-4C- alkylaminocarbonyl, mono- or di-1-4C-alky!aminosulphonyl, or -T3-N(R631 )R632, wherein
  • T3 is a bond, 1-4C-alkylene, or 2-4C-a!kylene interrupted by oxygen
  • R631 is 1-4C-alkyl, 1-4C-alkoxy-2-4C ⁇ alkyl, or phenyl-1-4C-aIkyl, R632 1-4C-alkyi, or 1-4C-alkoxy-2-4C-alkyl, or R631 and R632 together and with inclusion of the nitrogen atom, to which they are bonded, form a heterocyclic ring Het2, wherein Het2 is morpholino, thiomorpholi ⁇ o, S-oxo-thiomorphoiino, S,S-dioxo- thiomorpholino, piperidi ⁇ o, pyrrolidino, imidazolo, pyrrolo or pyrazolo, and
  • R64 is 1-4C-alkyl, 1-4C-alkoxy or halogen
  • R1 , R2, R3, R4, R5 and R6 and have the meanings as defined above, and
  • the present invention relates to a process wherein the above step ii) is carried out with thionyl chloride or oxalyl chloride.
  • the present invention relates to a process wherein the above step i) is carried out by synthesizing the compound of formula Il according to a process comprising the following steps: lengthening the carbon chain of a compound of formula V:
  • R1 , R2, R3, R4 and R5 have the meanings as defined above and PG1 stands for a suitable temporary protective group for the carboxyl group,
  • R1 , R2, R3, R4, R5 and R6 have the meanings as defined above and PG1 stands for a suitable temporary protective group for the carboxyl group, and
  • the present invention relates to a process according to any of the preceding aspects, wherein the compound of formula I is obtained in the form of the free base.
  • the present invention relates to a process according to any of the aspects one to four, wherein the compound of formula I is directly obtained in the form of its hydrochloride sait by reaction of a compound of formula H' with aqueous hydroxylamine.
  • the present invention relates to a process according to any of the aspects one to four for the preparation of other salts of the compounds of formula I than the hydrochloride, comprising
  • the present invention relates to a process according to the seventh aspect, wherein the acid addition salt of the compounds of formula I other than the hydrochloride is the methanesulfonate.
  • the present invention relates to a process for preparing a pharmaceutical composition containing a compound of formula i or a pharmaceuticaliy acceptable acid addition salt thereof, comprising synthesizing the compound of formula I or its acid addition salt according to any one of the preceding aspects and formulating the resulting compound with customary pharmaceutical excipients.
  • the present invention relates to a process according to the ninth aspect, wherein the pharmaceutical composition is for treating, preventing or ameliorating benign and/or malignant neoplasia, such as e.g. cancer, hyperproliferative diseases of benign or malignant behaviour and/or disorders responsive to induction of apoptosis.
  • benign and/or malignant neoplasia such as e.g. cancer, hyperproliferative diseases of benign or malignant behaviour and/or disorders responsive to induction of apoptosis.
  • the temperature of the amide forming step is in preferably in the range between 10 and 3O 0 C, most preferably at room temperature.
  • reaction mixture is stirred for 20-90 min after the completion of the addition of the compound of formula II' to the aqueous hydroxylamine containing solution.
  • the compounds of formula i can be prepared according to the following scheme by reacting the hydrochloride salt of the corresponding acrylic acid compounds of formula Il with a chlorinating agent and adding the obtained acid chloride of formula Ii' to a solution of aqueous hydroxylamine and, preferably, THF;
  • chlorinating agent examples include, but are not limited to, SOCI 2 and (COCI) 2 .
  • induction of differentiation is defined as a process of cellular reprogramming leading to a reversible or irreversible cell cycle arrest in GO and re-expression of a subset of genes typical for a certain specialized normal cell type or tissue (e.g. re- expression of milk fat proteins and fat in mammary carcinoma cells).
  • the process of the present invention provides compounds in purified or substantially pure form, such as e.g. greater than about 50%, more preferably about 60%, more preferably about 70%, more preferably about 80%, more preferably about 90%, more preferably about 95%, more preferably about 97%, more preferably about 99% wt purity as determined by art-known methods.
  • compositions prepared according to this invention can have histoFie deacetylases inhibitory activity, apoptosis inducing activity, antiproliferative effects and/or cell-differentiation inducing activity.
  • the administration of the compounds prepared according to this invention, the combinations and pharmaceutical compositions prepared according to the invention may be performed in any of the generally accepted modes of administration available in the art.
  • suitable modes of administration include intravenous, oral, nasal, parenteral, topical, transdermal and rectal delivery. Oral and intravenous delivery is preferred.
  • WO 2007/039404 particularly to page 87, penultimate paragraph.

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PCT/EP2009/052870 2008-03-12 2009-03-11 Novel method for the production of sulphonylpyrroles as hdac inhibitors WO2009112529A1 (en)

Priority Applications (18)

Application Number Priority Date Filing Date Title
AU2009224623A AU2009224623C1 (en) 2008-03-12 2009-03-11 Novel method for the production of sulphonylpyrroles as HDAC inhibitors
BRPI0909752A BRPI0909752B8 (pt) 2008-03-12 2009-03-11 processos para a produção de sulfonilpirróis como inibidores de hdac e de uma composição farmacêutica compreendendo os mesmos
NZ587824A NZ587824A (en) 2008-03-12 2009-03-11 Novel method for the production of sulphonylpyrroles as hdac inhibitors
UAA201011865A UA102091C2 (ru) 2008-03-12 2009-03-11 Способ получения сульфонилпиролов как ингибиторов hdac
SI200930103T SI2265580T1 (sl) 2008-03-12 2009-03-11 Novi postopek za pripravo sulfonilpirolov kot inhibitorjev HDAC
EP09721108A EP2265580B1 (en) 2008-03-12 2009-03-11 Novel method for the production of sulphonylpyrroles as hdac inhibitors
JP2010550194A JP5530939B2 (ja) 2008-03-12 2009-03-11 Ｈｄａｃ阻害剤としてのスルホニルピロールの新規製造法
MX2010010015A MX2010010015A (es) 2008-03-12 2009-03-11 Metodo novedoso para la produccion de sulfonilpirroles como inhibidores de hdac.
EA201001270A EA017929B1 (ru) 2008-03-12 2009-03-11 Способ получения сульфонилпирролов в качестве ингибиторов гистондезацетилаз (hdac)
CN2009801082773A CN101970404B (zh) 2008-03-12 2009-03-11 制备作为hdac抑制剂的磺酰基吡咯的方法
CA2719074A CA2719074C (en) 2008-03-12 2009-03-11 Novel method for the production of sulphonylpyrroles as hdac inhibitors
PL09721108T PL2265580T3 (pl) 2008-03-12 2009-03-11 Nowy sposób wytwarzania sulfonylopiroli jako inhibitorów HDAC
AT09721108T ATE519739T1 (de) 2008-03-12 2009-03-11 Neuartiges verfahren zur herstellung von sulphonylpyrrolen als hdac-hemmer
US12/921,928 US8785659B2 (en) 2008-03-12 2009-03-11 Method for the production of sulphonylpyrroles as HDAC inhibitors
DK09721108.0T DK2265580T3 (da) 2008-03-12 2009-03-11 Hidtil ukendt fremgangsmåde til fremstillingen af sulfonylpyrroler som HDAC-inhibitorer
IL207995A IL207995A (en) 2008-03-12 2010-09-05 Method for producing sulfonylpyrrols in hdac suppressors
ZA2010/06422A ZA201006422B (en) 2008-03-12 2010-09-07 Novel method for the production of sulphonylpyrroles as hdac inhibitors
HK11105798.0A HK1150319A1 (en) 2008-03-12 2011-06-08 Novel method for the production of sulphonylpyrroles as hdac inhibitors

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
EP08004567.7 2008-03-12
EP08004567A EP2100878A1 (en) 2008-03-12 2008-03-12 Novel method for the production of sulphonylpyrroles as HDAC inhibitors

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US (1) US8785659B2 (ja)
EP (2) EP2100878A1 (ja)
JP (1) JP5530939B2 (ja)
KR (1) KR101571915B1 (ja)
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WO2019043176A2 (en) 2017-08-31 2019-03-07 4Sc Ag HISTONE-DEACETYLASE INHIBITOR IN COMBINATION WITH ANTIMETABOLITE AGENT FOR CANCER THERAPY

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