SG11201901221YA - Methods for detecting aav - Google Patents
Methods for detecting aavInfo
- Publication number
- SG11201901221YA SG11201901221YA SG11201901221YA SG11201901221YA SG11201901221YA SG 11201901221Y A SG11201901221Y A SG 11201901221YA SG 11201901221Y A SG11201901221Y A SG 11201901221YA SG 11201901221Y A SG11201901221Y A SG 11201901221YA SG 11201901221Y A SG11201901221Y A SG 11201901221YA
- Authority
- SG
- Singapore
- Prior art keywords
- international
- sanofi
- rule
- methods
- aav
- Prior art date
Links
- 238000000034 method Methods 0.000 title abstract 4
- 239000002245 particle Substances 0.000 abstract 6
- 241000700605 Viruses Species 0.000 abstract 2
- 108090000565 Capsid Proteins Proteins 0.000 abstract 1
- 102100023321 Ceruloplasmin Human genes 0.000 abstract 1
- 230000021736 acetylation Effects 0.000 abstract 1
- 238000006640 acetylation reaction Methods 0.000 abstract 1
- 230000006240 deamidation Effects 0.000 abstract 1
- 230000008520 organization Effects 0.000 abstract 1
- 230000026683 transduction Effects 0.000 abstract 1
- 238000010361 transduction Methods 0.000 abstract 1
- 230000003612 virological effect Effects 0.000 abstract 1
Classifications
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- C—CHEMISTRY; METALLURGY
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- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/85—Vectors or expression systems specially adapted for eukaryotic hosts for animal cells
- C12N15/86—Viral vectors
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/005—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from viruses
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N30/00—Investigating or analysing materials by separation into components using adsorption, absorption or similar phenomena or using ion-exchange, e.g. chromatography or field flow fractionation
- G01N30/02—Column chromatography
- G01N30/62—Detectors specially adapted therefor
- G01N30/72—Mass spectrometers
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N30/00—Investigating or analysing materials by separation into components using adsorption, absorption or similar phenomena or using ion-exchange, e.g. chromatography or field flow fractionation
- G01N30/02—Column chromatography
- G01N30/62—Detectors specially adapted therefor
- G01N30/72—Mass spectrometers
- G01N30/7233—Mass spectrometers interfaced to liquid or supercritical fluid chromatograph
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
- G01N33/6848—Methods of protein analysis involving mass spectrometry
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- C12N2750/00—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA ssDNA viruses
- C12N2750/00011—Details
- C12N2750/14011—Parvoviridae
- C12N2750/14111—Dependovirus, e.g. adenoassociated viruses
- C12N2750/14121—Viruses as such, e.g. new isolates, mutants or their genomic sequences
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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- C12N2750/00—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA ssDNA viruses
- C12N2750/00011—Details
- C12N2750/14011—Parvoviridae
- C12N2750/14111—Dependovirus, e.g. adenoassociated viruses
- C12N2750/14122—New viral proteins or individual genes, new structural or functional aspects of known viral proteins or genes
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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- C12N2750/00—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA ssDNA viruses
- C12N2750/00011—Details
- C12N2750/14011—Parvoviridae
- C12N2750/14111—Dependovirus, e.g. adenoassociated viruses
- C12N2750/14123—Virus like particles [VLP]
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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- C12N2750/00—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA ssDNA viruses
- C12N2750/00011—Details
- C12N2750/14011—Parvoviridae
- C12N2750/14111—Dependovirus, e.g. adenoassociated viruses
- C12N2750/14141—Use of virus, viral particle or viral elements as a vector
- C12N2750/14143—Use of virus, viral particle or viral elements as a vector viral genome or elements thereof as genetic vector
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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- C12N2750/00—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA ssDNA viruses
- C12N2750/00011—Details
- C12N2750/14011—Parvoviridae
- C12N2750/14111—Dependovirus, e.g. adenoassociated viruses
- C12N2750/14151—Methods of production or purification of viral material
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N30/00—Investigating or analysing materials by separation into components using adsorption, absorption or similar phenomena or using ion-exchange, e.g. chromatography or field flow fractionation
- G01N30/02—Column chromatography
- G01N2030/022—Column chromatography characterised by the kind of separation mechanism
- G01N2030/027—Liquid chromatography
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2333/00—Assays involving biological materials from specific organisms or of a specific nature
- G01N2333/005—Assays involving biological materials from specific organisms or of a specific nature from viruses
- G01N2333/01—DNA viruses
- G01N2333/075—Adenoviridae
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- Engineering & Computer Science (AREA)
- Chemical & Material Sciences (AREA)
- Molecular Biology (AREA)
- Genetics & Genomics (AREA)
- Physics & Mathematics (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Biomedical Technology (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- Organic Chemistry (AREA)
- Biotechnology (AREA)
- Immunology (AREA)
- Biophysics (AREA)
- General Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Pathology (AREA)
- General Physics & Mathematics (AREA)
- Analytical Chemistry (AREA)
- Microbiology (AREA)
- Hematology (AREA)
- Urology & Nephrology (AREA)
- Bioinformatics & Computational Biology (AREA)
- Virology (AREA)
- Medicinal Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Plant Pathology (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Cell Biology (AREA)
- Food Science & Technology (AREA)
- Gastroenterology & Hepatology (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
- Peptides Or Proteins (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Other Investigation Or Analysis Of Materials By Electrical Means (AREA)
- Investigating Or Analysing Biological Materials (AREA)
- Medicines Containing Material From Animals Or Micro-Organisms (AREA)
- Photoreceptors In Electrophotography (AREA)
Abstract
INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION TREATY (PCT) (19) World Intellectual Property 111111111111111111 11111111110111110100111111011100111111111111011111011110111111 Organization International Bureau (10) International Publication Number (43) International Publication Date ......0\" WO 2018/035059 Al 22 February 2018 (22.02.2018) WIP0 I PCT (51) International Patent Classification: C12N 7/00 (2006.01) G01N 33/68 (2006.01) Published: C12N 15/86 (2006.01) — with international search report (Art 21(3)) — before the expiration of the time limit for amending the (21) International Application Number: claims and to be republished in the event of receipt of PCT/US2017/046814 amendments (Rule 48.2(h)) (22) International Filing Date: — with sequence listing part of description (Rule 5.2(a)) 14 August 2017 (14.08.2017) (25) Filing Language: English (26) Publication Language: English (30) Priority Data: 62/375,314 15 August 2016 (15.08.2016) US (71) Applicant: GENZYME CORPORATION [US/US]; 500 Kendall Street, Cambridge, MA 02142 (US). (72) Inventors: JIN, Xiaoying; c/o Sanofi, 55 Corporate Drive, Bridgewater, NJ 08807 (US). O'RIORDAN, Catherine, R.; c/o Sanofi, 55 Corporate Drive, Bridgewater, NJ 08807 - (US). LIU, Lin; c/o Sanofi, 55 Corporate Drive, Bridgewa- ter, NJ 08807 (US). ZHANG, Kate; c/o Sanofi, 55 Corpo- - rate Drive, Bridgewater, NJ 08807 (US). = Agent: DONAHUE, Brian, A. et al.; Morrison & Foerster = (74) LLP, 755 Page Mill Road, Palo Alto, CA 94304-1018 (US). = Designated States (unless otherwise indicated, for every kind of national protection available): AE, AG, AL, AM, AO, AT, AU, AZ, BA, BB, BG, BH, BN, BR, BW, BY, BZ, CA, CH, CL, CN, CO, CR, CU, CZ, DE, DJ, DK, DM, DO, (81) = = DZ, EC, EE, EG, ES, FI, GB, GD, GE, GH, GM, GT, HN, = HR, HU, ID, IL, IN, IR, IS, JO, JP, KE, KG, KH, KN, KP, KR, KW, KZ, LA, LC, LK, LR, LS, LU, LY, MA, MD, ME, MG, MK, MN, MW, MX, MY, MZ, NA, NG, NI, NO, NZ, OM, PA, PE, PG, PH, PL, PT, QA, RO, RS, RU, RW, SA, = = SC, SD, SE, SG, SK, SL, SM, ST, SV, SY, TH, TJ, TM, TN, TR, TT, TZ, UA, UG, US, UZ, VC, VN, ZA, ZM, ZW. = = Designated States (unless otherwise indicated, for every (84) = kind of regional protection available): ARIPO (BW, GH, = GM, KE, LR, LS, MW, MZ, NA, RW, SD, SL, ST, SZ, TZ, = UG, ZM, ZW), Eurasian (AM, AZ, BY, KG, KZ, RU, TJ, = TM), European (AL, AT, BE, BG, CH, CY, CZ, DE, DK, — EE, ES, FI, FR, GB, GR, HR, HU, IE, IS, IT, LT, LU, LV, MC, MK, MT, NL, NO, PL, PT, RO, RS, SE, SI, SK, SM, TR), OAPI (BF, BJ, CF, CG, CI, CM, GA, GN, GQ, GW, KM, ML, MR, NE, SN, TD, TG). = — 1-1 ..! Declarations under Rule 4.17: ON — of inventorship (Rule 4.17(iv)) 1 1 in © en 11 in (54) Title: METHODS FOR DETECTING AAV ---- (57) : Provided herein are methods for determining the serotype of a virus particle and/or or determining the heterogeneity GC , 1 of a virus particle (e.g., an AAV particle). In other embodiments, the invention provides methods to determine the heterogeneity of C::::) AAV particles. In some aspects, the invention provides viral particles (e.g., rAAV particles) with improved stability and/or improved N transduction efficiency by increasing the acetylation and/or deamidation of capsid proteins. C
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US201662375314P | 2016-08-15 | 2016-08-15 | |
PCT/US2017/046814 WO2018035059A1 (en) | 2016-08-15 | 2017-08-14 | Methods for detecting aav |
Publications (1)
Publication Number | Publication Date |
---|---|
SG11201901221YA true SG11201901221YA (en) | 2019-03-28 |
Family
ID=59762045
Family Applications (2)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
SG11201901221YA SG11201901221YA (en) | 2016-08-15 | 2017-08-14 | Methods for detecting aav |
SG10201913002QA SG10201913002QA (en) | 2016-08-15 | 2017-08-14 | Methods for detecting aav |
Family Applications After (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
SG10201913002QA SG10201913002QA (en) | 2016-08-15 | 2017-08-14 | Methods for detecting aav |
Country Status (23)
Country | Link |
---|---|
US (2) | US11698377B2 (en) |
EP (2) | EP3851449A1 (en) |
JP (3) | JP7021191B2 (en) |
KR (3) | KR102538037B1 (en) |
CN (1) | CN110168080B (en) |
AU (2) | AU2017312951B2 (en) |
BR (1) | BR112019002934A2 (en) |
CA (1) | CA3033856A1 (en) |
CL (2) | CL2019000392A1 (en) |
CR (1) | CR20190127A (en) |
CY (1) | CY1124364T1 (en) |
DK (1) | DK3497207T3 (en) |
ES (1) | ES2863674T3 (en) |
HU (1) | HUE053747T2 (en) |
IL (1) | IL264819B1 (en) |
MA (1) | MA55748A (en) |
MX (2) | MX2019001938A (en) |
PH (1) | PH12019500316A1 (en) |
SG (2) | SG11201901221YA (en) |
TN (1) | TN2019000047A1 (en) |
TW (2) | TW202309068A (en) |
WO (1) | WO2018035059A1 (en) |
ZA (1) | ZA201900945B (en) |
Families Citing this family (19)
Publication number | Priority date | Publication date | Assignee | Title |
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GB201508026D0 (en) | 2015-05-11 | 2015-06-24 | Ucl Business Plc | Capsid |
JOP20190200A1 (en) | 2017-02-28 | 2019-08-27 | Univ Pennsylvania | Compositions useful in treatment of spinal muscular atrophy |
SG11201907714UA (en) | 2017-02-28 | 2019-09-27 | Univ Pennsylvania | Adeno-associated virus (aav) clade f vector and uses therefor |
KR20210006327A (en) * | 2018-02-27 | 2021-01-18 | 더 트러스티스 오브 더 유니버시티 오브 펜실베니아 | Novel adeno-associated virus (AAV) vectors with reduced capsid deamidation and uses thereof |
CA3091806A1 (en) * | 2018-02-27 | 2019-09-06 | The Trustees Of The University Of Pennsylvania | Novel adeno-associated virus (aav) vectors, aav vectors having reduced capsid deamidation and uses therefor |
US20210010028A1 (en) * | 2018-03-06 | 2021-01-14 | Voyager Therapeutics, Inc. | Insect cell manufactured partial self-complementary aav genomes |
US11391707B2 (en) * | 2018-07-27 | 2022-07-19 | Waters Technologies Corporation | Liquid chromatography/mass spectrometry methods for the analysis of polar molecules |
US20210317478A1 (en) * | 2018-08-21 | 2021-10-14 | Massachusetts Eye And Ear Infirmary | Compositions and methods for modulating transduction efficiency of adeno-associated viruses |
EP3870976B1 (en) * | 2018-10-25 | 2023-11-29 | Regeneron Pharmaceuticals, Inc. | Methods for analysis of viral capsid protein composition |
US20230204595A1 (en) | 2020-01-03 | 2023-06-29 | Sarepta Therapeutics, Inc. | Methods for analyzing aav capsid proteins |
JP2023513004A (en) | 2020-01-29 | 2023-03-30 | ジェンザイム・コーポレーション | Modified adeno-associated virus capsid proteins for ophthalmic gene therapy and methods of their use |
CN111517359B (en) * | 2020-04-23 | 2021-08-20 | 江南大学 | Synthesis method of chiral copper sulfide super particle |
RU2748540C1 (en) * | 2021-02-08 | 2021-05-26 | Автономная некоммерческая образовательная организация высшего образования "Сколковский институт науки и технологий" | Method for detecting sars-cov-2 virus by mass spectrometry |
EP4295158A1 (en) * | 2021-02-19 | 2023-12-27 | Waters Technologies Corporation | Methods for peptide mapping of adeno-associated virus (aav) proteins |
WO2022224965A1 (en) * | 2021-04-20 | 2022-10-27 | 株式会社ユニバーサル・バイオサンプリング | Specimen retention card and specimen inspection method using same |
WO2023287724A1 (en) * | 2021-07-12 | 2023-01-19 | Regeneron Pharmaceuticals, Inc. | Online native mass spectrometry methods for assaying viral particles |
KR20240031375A (en) * | 2021-07-12 | 2024-03-07 | 리제너론 파아마슈티컬스, 인크. | How to Characterize Virus Particles Using Two-Dimensional Liquid Chromatography-Mass Spectrometry |
CN113552349B (en) * | 2021-07-30 | 2022-07-19 | 上海勉亦生物科技有限公司 | Detection method of AAV protein coat |
WO2023132338A1 (en) * | 2022-01-06 | 2023-07-13 | 富士フイルム株式会社 | Method and kit for identifying sugar-bound amino acid site in protein |
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JP4827353B2 (en) | 1999-08-09 | 2011-11-30 | ターゲティッド ジェネティクス コーポレイション | Increased expression of single-stranded heterologous nucleotide sequences from recombinant viral vectors by designing sequences to form intrastrand base pairs |
ES2256265T3 (en) | 2000-06-01 | 2006-07-16 | University Of North Carolina At Chapel Hill | DUVICATED PARVOVIRUS VECTORS. |
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2017
- 2017-08-14 MX MX2019001938A patent/MX2019001938A/en unknown
- 2017-08-14 ES ES17761362T patent/ES2863674T3/en active Active
- 2017-08-14 TN TNP/2019/000047A patent/TN2019000047A1/en unknown
- 2017-08-14 AU AU2017312951A patent/AU2017312951B2/en active Active
- 2017-08-14 SG SG11201901221YA patent/SG11201901221YA/en unknown
- 2017-08-14 KR KR1020227025409A patent/KR102538037B1/en active IP Right Grant
- 2017-08-14 EP EP20210237.2A patent/EP3851449A1/en active Pending
- 2017-08-14 CN CN201780063531.7A patent/CN110168080B/en active Active
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