SG11201809522WA - Method of nucleic acid sequence determination - Google Patents
Method of nucleic acid sequence determinationInfo
- Publication number
- SG11201809522WA SG11201809522WA SG11201809522WA SG11201809522WA SG11201809522WA SG 11201809522W A SG11201809522W A SG 11201809522WA SG 11201809522W A SG11201809522W A SG 11201809522WA SG 11201809522W A SG11201809522W A SG 11201809522WA SG 11201809522W A SG11201809522W A SG 11201809522WA
- Authority
- SG
- Singapore
- Prior art keywords
- international
- street
- rule
- nucleotide
- california
- Prior art date
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/10—Transferases (2.)
- C12N9/12—Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
- C12N9/1241—Nucleotidyltransferases (2.7.7)
- C12N9/1247—DNA-directed RNA polymerase (2.7.7.6)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
- C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2521/00—Reaction characterised by the enzymatic activity
- C12Q2521/10—Nucleotidyl transfering
- C12Q2521/101—DNA polymerase
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2565/00—Nucleic acid analysis characterised by mode or means of detection
- C12Q2565/50—Detection characterised by immobilisation to a surface
- C12Q2565/518—Detection characterised by immobilisation to a surface characterised by the immobilisation of the nucleic acid sample or target
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Y—ENZYMES
- C12Y207/00—Transferases transferring phosphorus-containing groups (2.7)
- C12Y207/07—Nucleotidyltransferases (2.7.7)
- C12Y207/07006—DNA-directed RNA polymerase (2.7.7.6)
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Health & Medical Sciences (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Engineering & Computer Science (AREA)
- Molecular Biology (AREA)
- Genetics & Genomics (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Biochemistry (AREA)
- Biotechnology (AREA)
- Microbiology (AREA)
- Immunology (AREA)
- Analytical Chemistry (AREA)
- Biophysics (AREA)
- Physics & Mathematics (AREA)
- Medicinal Chemistry (AREA)
- Biomedical Technology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Enzymes And Modification Thereof (AREA)
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201662329489P | 2016-04-29 | 2016-04-29 | |
| US201762444733P | 2017-01-10 | 2017-01-10 | |
| PCT/US2017/030135 WO2017190012A1 (fr) | 2016-04-29 | 2017-04-28 | Procédé de détermination d'une séquence d'acides nucléiques |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| SG11201809522WA true SG11201809522WA (en) | 2018-11-29 |
Family
ID=58672825
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| SG11201809522WA SG11201809522WA (en) | 2016-04-29 | 2017-04-28 | Method of nucleic acid sequence determination |
Country Status (9)
| Country | Link |
|---|---|
| US (2) | US10584379B2 (fr) |
| EP (1) | EP3449011B1 (fr) |
| JP (1) | JP6915939B2 (fr) |
| KR (1) | KR102231977B1 (fr) |
| CN (1) | CN109154024B (fr) |
| AU (1) | AU2017258523B2 (fr) |
| CA (1) | CA3022431C (fr) |
| SG (1) | SG11201809522WA (fr) |
| WO (1) | WO2017190012A1 (fr) |
Families Citing this family (33)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP3449011B1 (fr) | 2016-04-29 | 2020-11-04 | Omniome, Inc. | Procédé de détermination d'une séquence d'acides nucléiques |
| US10597643B2 (en) | 2016-04-29 | 2020-03-24 | Omniome, Inc. | Polymerases engineered to reduce nucleotide-independent DNA binding |
| WO2018035134A1 (fr) * | 2016-08-15 | 2018-02-22 | Omniome, Inc. | Procédé et système de séquençage d'acides nucléiques |
| WO2018136487A1 (fr) * | 2017-01-20 | 2018-07-26 | Omniome, Inc. | Procédé de détection de nucléotides apparentés dans un flux de travaux de séquençage d'acides nucléiques |
| US10161003B2 (en) | 2017-04-25 | 2018-12-25 | Omniome, Inc. | Methods and apparatus that increase sequencing-by-binding efficiency |
| AU2018353136B2 (en) * | 2017-10-19 | 2022-05-19 | Pacific Biosciences Of California, Inc. | Simultaneous background reduction and complex stabilization in binding assay workflows |
| BR112019027628A2 (pt) | 2018-02-16 | 2020-08-25 | Illumina, Inc. | nucleotídeos marcados com uma carga e métodos de uso dos mesmos |
| US10400272B1 (en) | 2018-04-26 | 2019-09-03 | Omniome, Inc. | Methods and compositions for stabilizing nucleic acid-nucleotide-polymerase complexes |
| US11339428B2 (en) | 2018-05-31 | 2022-05-24 | Pacific Biosciences Of California, Inc. | Increased signal to noise in nucleic acid sequencing |
| WO2020023362A1 (fr) | 2018-07-24 | 2020-01-30 | Omniome, Inc. | Formation en série d'espèces de complexe ternaire |
| US11242512B2 (en) | 2018-09-17 | 2022-02-08 | Omniome, Inc. | Engineered polymerases for improved sequencing |
| US10768173B1 (en) | 2019-09-06 | 2020-09-08 | Element Biosciences, Inc. | Multivalent binding composition for nucleic acid analysis |
| US10704094B1 (en) | 2018-11-14 | 2020-07-07 | Element Biosciences, Inc. | Multipart reagents having increased avidity for polymerase binding |
| US10876148B2 (en) | 2018-11-14 | 2020-12-29 | Element Biosciences, Inc. | De novo surface preparation and uses thereof |
| WO2020101795A1 (fr) | 2018-11-15 | 2020-05-22 | Omniome, Inc. | Détection électronique de structure d'acide nucléique |
| EP3891304A1 (fr) | 2018-12-04 | 2021-10-13 | Omniome, Inc. | Fluides à phase mixte pour séquençage d'acide nucléique et autres essais analytiques |
| US11041199B2 (en) | 2018-12-20 | 2021-06-22 | Omniome, Inc. | Temperature control for analysis of nucleic acids and other analytes |
| EP3924513B1 (fr) | 2019-02-14 | 2023-04-12 | Pacific Biosciences of California, Inc. | Atténuation d'impacts défavorables de systèmes de détection sur des acides nucléiques et d'autres analytes biologiques |
| WO2020242901A1 (fr) * | 2019-05-24 | 2020-12-03 | Element Biosciences, Inc. | Conjugués polymérase-nucléotide pour séquençage par piégeage |
| WO2020257654A1 (fr) * | 2019-06-20 | 2020-12-24 | Arizona Board Of Regents On Behalf Of Arizona State University | Lecture électrique directe de séquences d'acides nucléiques |
| JP2022537069A (ja) * | 2019-06-21 | 2022-08-23 | サーモ フィッシャー サイエンティフィック バルティックス ユーエービー | 次世代配列決定ライブラリを調製するための核酸の標識化に有用なオリゴヌクレオチドが連結された三リン酸ヌクレオチド |
| CN114728996B (zh) | 2019-09-10 | 2022-11-29 | 加利福尼亚太平洋生物科学股份有限公司 | 核苷酸的可逆修饰 |
| US11287422B2 (en) | 2019-09-23 | 2022-03-29 | Element Biosciences, Inc. | Multivalent binding composition for nucleic acid analysis |
| EP4045683A1 (fr) | 2019-10-18 | 2022-08-24 | Omniome, Inc. | Procédés et compositions pour le coiffage d'acides nucléiques |
| WO2021092431A1 (fr) | 2019-11-08 | 2021-05-14 | Omniome, Inc. | Polymérases modifiées pour un séquençage amélioré par liaison |
| DE202019106694U1 (de) | 2019-12-02 | 2020-03-19 | Omniome, Inc. | System zur Sequenzierung von Nukleinsäuren in Fluidschaum |
| DE202019106695U1 (de) | 2019-12-02 | 2020-03-19 | Omniome, Inc. | System zur Sequenzierung von Nukleinsäuren in Fluidschaum |
| WO2021178467A1 (fr) | 2020-03-03 | 2021-09-10 | Omniome, Inc. | Procédés et compositions de séquençage d'acides nucléiques bicaténaires |
| US20230183798A1 (en) | 2020-05-05 | 2023-06-15 | Pacific Biosciences Of California, Inc. | Compositions and methods for modifying polymerase-nucleic acid complexes |
| CA3177299A1 (fr) * | 2020-06-30 | 2022-01-06 | Illumina Inc. | Sequencage a commande catalytique par synthese pour produire de l'adn sans scarification |
| EP4337789A1 (fr) | 2021-05-10 | 2024-03-20 | Pacific Biosciences of California, Inc. | Régénération de tampon d'amplification d'adn pendant l'amplification par cercle roulant |
| WO2022240764A1 (fr) | 2021-05-10 | 2022-11-17 | Pacific Biosciences Of California, Inc. | Ensemencement et amplification monomoléculaire sur une surface |
| WO2023081485A1 (fr) | 2021-11-08 | 2023-05-11 | Pacific Biosciences Of California, Inc. | Séquençage par étapes d'un polynucléotide à l'aide d'un mélange réactionnel homogène |
Family Cites Families (29)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO1991006678A1 (fr) | 1989-10-26 | 1991-05-16 | Sri International | Sequençage d'adn |
| US7057026B2 (en) | 2001-12-04 | 2006-06-06 | Solexa Limited | Labelled nucleotides |
| US7414116B2 (en) | 2002-08-23 | 2008-08-19 | Illumina Cambridge Limited | Labelled nucleotides |
| AU2003269991A1 (en) | 2003-08-20 | 2005-03-10 | Applera Corporation | Polymerase compositions |
| US8071755B2 (en) | 2004-05-25 | 2011-12-06 | Helicos Biosciences Corporation | Nucleotide analogs |
| US7264934B2 (en) | 2004-06-10 | 2007-09-04 | Ge Healthcare Bio-Sciences Corp. | Rapid parallel nucleic acid analysis |
| WO2005123957A2 (fr) * | 2004-06-10 | 2005-12-29 | Ge Healthcare Bio-Sciences Corp. | Procede d'analyse d'acides nucleiques |
| GB2423819B (en) | 2004-09-17 | 2008-02-06 | Pacific Biosciences California | Apparatus and method for analysis of molecules |
| US7482120B2 (en) | 2005-01-28 | 2009-01-27 | Helicos Biosciences Corporation | Methods and compositions for improving fidelity in a nucleic acid synthesis reaction |
| US7544794B1 (en) | 2005-03-11 | 2009-06-09 | Steven Albert Benner | Method for sequencing DNA and RNA by synthesis |
| WO2007091077A1 (fr) | 2006-02-08 | 2007-08-16 | Solexa Limited | Procédé de séquençage d'une matrice polynucléotidique |
| EP4105644A3 (fr) | 2006-03-31 | 2022-12-28 | Illumina, Inc. | Systèmes et procédés pour analyse de séquençage par synthèse |
| US8962293B2 (en) * | 2006-10-18 | 2015-02-24 | Roche Molecular Systems, Inc. | DNA polymerases and related methods |
| US8026091B2 (en) * | 2007-07-13 | 2011-09-27 | Roche Molecular Systems, Inc. | DNA polymerases and related methods |
| US8652781B2 (en) | 2008-02-12 | 2014-02-18 | Pacific Biosciences Of California, Inc. | Cognate sampling kinetics |
| US8628940B2 (en) | 2008-09-24 | 2014-01-14 | Pacific Biosciences Of California, Inc. | Intermittent detection during analytical reactions |
| US8133672B2 (en) | 2008-03-31 | 2012-03-13 | Pacific Biosciences Of California, Inc. | Two slow-step polymerase enzyme systems and methods |
| CA2720046C (fr) | 2008-03-31 | 2018-07-24 | Pacific Biosciences Of California, Inc. | Generation de polymerases modifiees pour une precision amelioree dans le sequencage d'une seule molecule |
| WO2010075188A2 (fr) | 2008-12-23 | 2010-07-01 | Illumina Inc. | Libération multibase pour lectures longues dans le séquençage par des protocoles de synthèse |
| US20100255487A1 (en) | 2009-03-27 | 2010-10-07 | Life Technologies Corporation | Methods and apparatus for single molecule sequencing using energy transfer detection |
| US20100311144A1 (en) * | 2009-06-05 | 2010-12-09 | Life Technologies Corporation | Mutant dna polymerases |
| US20130040365A1 (en) | 2011-08-10 | 2013-02-14 | Life Technologies Corporation | Polymerase compositions, methods of making and using same |
| US9279154B2 (en) | 2011-12-21 | 2016-03-08 | Illumina, Inc. | Apparatus and methods for kinetic analysis and determination of nucleic acid sequences |
| US9309501B2 (en) | 2012-12-24 | 2016-04-12 | Industrial Technology Research Institute | Isolated DNA polymerases, kits and applications thereof |
| GB201301178D0 (en) | 2013-01-23 | 2013-03-06 | Dynamic Biosensors Gmbh | Method for sequencing a template nucleic acid immobilized on a substrate |
| WO2015048763A1 (fr) | 2013-09-30 | 2015-04-02 | Life Technologies Corporation | Compositions de polymérase, leurs procédés de fabrication et d'utilisation |
| US10077470B2 (en) | 2015-07-21 | 2018-09-18 | Omniome, Inc. | Nucleic acid sequencing methods and systems |
| EP3449011B1 (fr) | 2016-04-29 | 2020-11-04 | Omniome, Inc. | Procédé de détermination d'une séquence d'acides nucléiques |
| US10597643B2 (en) | 2016-04-29 | 2020-03-24 | Omniome, Inc. | Polymerases engineered to reduce nucleotide-independent DNA binding |
-
2017
- 2017-04-28 EP EP17722356.7A patent/EP3449011B1/fr active Active
- 2017-04-28 CA CA3022431A patent/CA3022431C/fr active Active
- 2017-04-28 US US15/581,822 patent/US10584379B2/en active Active
- 2017-04-28 WO PCT/US2017/030135 patent/WO2017190012A1/fr active Application Filing
- 2017-04-28 JP JP2018556287A patent/JP6915939B2/ja active Active
- 2017-04-28 SG SG11201809522WA patent/SG11201809522WA/en unknown
- 2017-04-28 KR KR1020187034503A patent/KR102231977B1/ko active IP Right Grant
- 2017-04-28 CN CN201780026228.XA patent/CN109154024B/zh active Active
- 2017-04-28 AU AU2017258523A patent/AU2017258523B2/en active Active
-
2020
- 2020-01-07 US US16/736,071 patent/US11976323B2/en active Active
Also Published As
| Publication number | Publication date |
|---|---|
| AU2017258523B2 (en) | 2020-08-13 |
| US11976323B2 (en) | 2024-05-07 |
| KR20190003660A (ko) | 2019-01-09 |
| US10584379B2 (en) | 2020-03-10 |
| CN109154024A (zh) | 2019-01-04 |
| CA3022431C (fr) | 2023-03-21 |
| KR102231977B1 (ko) | 2021-03-24 |
| AU2017258523A1 (en) | 2018-11-22 |
| EP3449011B1 (fr) | 2020-11-04 |
| US20170314072A1 (en) | 2017-11-02 |
| JP6915939B2 (ja) | 2021-08-11 |
| CN109154024B (zh) | 2022-03-04 |
| CA3022431A1 (fr) | 2017-11-02 |
| EP3449011A1 (fr) | 2019-03-06 |
| JP2019526225A (ja) | 2019-09-19 |
| US20200199668A1 (en) | 2020-06-25 |
| WO2017190012A1 (fr) | 2017-11-02 |
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