MX2022010611A - Identificacion libre de bisulfito de modificaciones de citosina por resolucion de base. - Google Patents

Identificacion libre de bisulfito de modificaciones de citosina por resolucion de base.

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Publication number
MX2022010611A
MX2022010611A MX2022010611A MX2022010611A MX2022010611A MX 2022010611 A MX2022010611 A MX 2022010611A MX 2022010611 A MX2022010611 A MX 2022010611A MX 2022010611 A MX2022010611 A MX 2022010611A MX 2022010611 A MX2022010611 A MX 2022010611A
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MX
Mexico
Prior art keywords
bisulfite
free
base
resolution identification
cytosine modifications
Prior art date
Application number
MX2022010611A
Other languages
English (en)
Inventor
Chunxiao Song
Yibin Liu
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Ludwig Inst For Cancer Res Ltd
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Publication date
Application filed by Ludwig Inst For Cancer Res Ltd filed Critical Ludwig Inst For Cancer Res Ltd
Publication of MX2022010611A publication Critical patent/MX2022010611A/es

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    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12PFERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P17/00Preparation of heterocyclic carbon compounds with only O, N, S, Se or Te as ring hetero atoms
    • C12P17/16Preparation of heterocyclic carbon compounds with only O, N, S, Se or Te as ring hetero atoms containing two or more hetero rings
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/0004Oxidoreductases (1.)
    • C12N9/0071Oxidoreductases (1.) acting on paired donors with incorporation of molecular oxygen (1.14)
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/10Transferases (2.)
    • C12N9/1048Glycosyltransferases (2.4)
    • C12N9/1051Hexosyltransferases (2.4.1)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12PFERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P17/00Preparation of heterocyclic carbon compounds with only O, N, S, Se or Te as ring hetero atoms
    • C12P17/10Nitrogen as only ring hetero atom
    • C12P17/12Nitrogen as only ring hetero atom containing a six-membered hetero ring
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    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
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    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • C12Q1/6874Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12Y204/00Glycosyltransferases (2.4)
    • C12Y204/01Hexosyltransferases (2.4.1)
    • C12Y204/01026DNA alpha-glucosyltransferase (2.4.1.26)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y204/00Glycosyltransferases (2.4)
    • C12Y204/01Hexosyltransferases (2.4.1)
    • C12Y204/01027DNA beta-glucosyltransferase (2.4.1.27)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/154Methylation markers

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Wood Science & Technology (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Genetics & Genomics (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • General Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Biotechnology (AREA)
  • Molecular Biology (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Immunology (AREA)
  • Biophysics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Medicinal Chemistry (AREA)
  • Biomedical Technology (AREA)
  • General Chemical & Material Sciences (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Saccharide Compounds (AREA)
  • Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
  • Enzymes And Modification Thereof (AREA)

Abstract

Esta descripción proporciona métodos para la identificación libre de bisulfito en una secuencia de ácido nucleico de las localizaciones de la 5-metilcitosina, la 5-hidroximetilcitosina, la 5-carboxilcitosina y la 5-formilcitosina.
MX2022010611A 2018-01-08 2020-07-13 Identificacion libre de bisulfito de modificaciones de citosina por resolucion de base. MX2022010611A (es)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201862614798P 2018-01-08 2018-01-08
US201862660523P 2018-04-20 2018-04-20
US201862771409P 2018-11-26 2018-11-26

Publications (1)

Publication Number Publication Date
MX2022010611A true MX2022010611A (es) 2022-09-21

Family

ID=67143801

Family Applications (2)

Application Number Title Priority Date Filing Date
MX2020007259A MX2020007259A (es) 2018-01-08 2019-01-08 Identificación libre de bisulfito de modificaciones de citosina por resolución de base.
MX2022010611A MX2022010611A (es) 2018-01-08 2020-07-13 Identificacion libre de bisulfito de modificaciones de citosina por resolucion de base.

Family Applications Before (1)

Application Number Title Priority Date Filing Date
MX2020007259A MX2020007259A (es) 2018-01-08 2019-01-08 Identificación libre de bisulfito de modificaciones de citosina por resolución de base.

Country Status (15)

Country Link
US (4) US12071660B2 (es)
EP (1) EP3737748A4 (es)
JP (2) JP7136899B2 (es)
KR (2) KR20230030037A (es)
CN (2) CN111971386A (es)
AU (2) AU2019205416B2 (es)
BR (1) BR112020013718A2 (es)
CA (1) CA3087915A1 (es)
IL (2) IL275850B2 (es)
MA (1) MA51633A (es)
MX (2) MX2020007259A (es)
NZ (1) NZ765943A (es)
SG (1) SG11202006511YA (es)
WO (1) WO2019136413A1 (es)
ZA (1) ZA202004769B (es)

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MX2022000377A (es) * 2019-07-08 2022-03-25 Ludwig Inst For Cancer Res Ltd Analisis de metilacion del genoma completo sin bisulfito.
CN110669824A (zh) * 2019-10-11 2020-01-10 广州迈森致远基因科技有限公司 低起始量血浆游离dna甲基化建库试剂盒及方法
CN110820050A (zh) * 2019-11-22 2020-02-21 北京吉因加科技有限公司 全基因组甲基化非重亚硫酸氢盐测序文库及构建
EP4103743A1 (en) 2020-02-11 2022-12-21 Ludwig Institute for Cancer Research Ltd Targeted, long-read nucleic acid sequencing for the determination of cytosine modifications
CN113373207A (zh) * 2020-02-25 2021-09-10 深圳华大基因科技服务有限公司 确定胞嘧啶修饰的方法
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JP2023539128A (ja) 2020-08-19 2023-09-13 マヨ ファウンデーション フォア メディカル エデュケーション アンド リサーチ 非ホジキンリンパ腫の検出
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WO2022087309A1 (en) * 2020-10-23 2022-04-28 Guardant Health, Inc. Compositions and methods for analyzing dna using partitioning and base conversion
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WO2022165247A1 (en) 2021-01-29 2022-08-04 Mayo Foundation For Medical Education And Research Detecting the presence or absence of multiple types of cancer
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KR20240046525A (ko) * 2021-07-27 2024-04-09 더 챈슬러 마스터즈 앤드 스칼라스 오브 더 유니버시티 오브 옥스포드 세포-유리 dna에 대한 tet-보조 피리딘 보란 시퀀싱과 관련된 조성물 및 방법
CN113846160B (zh) * 2021-09-14 2024-08-20 翌圣生物科技(上海)股份有限公司 正向筛选的胞嘧啶甲基化快速检测方法及过氧钨酸盐在将5hmC氧化为thT中的应用
CN114085894A (zh) * 2021-11-03 2022-02-25 翌圣生物科技(上海)股份有限公司 核酸甲基化胞嘧啶转化方法
WO2023082240A1 (zh) * 2021-11-15 2023-05-19 深圳华大智造科技股份有限公司 一种检测全基因组范围内的dna甲基化修饰的方法
WO2023129965A2 (en) * 2021-12-29 2023-07-06 Foundation Medicine, Inc. Detection of genetic and epigenetic information in a single workflow
CN114045345B (zh) * 2022-01-07 2022-04-29 臻和(北京)生物科技有限公司 基于游离dna的基因组癌变信息检测系统和检测方法
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WO2019136413A4 (en) 2019-08-29
CA3087915A1 (en) 2019-07-11
ZA202004769B (en) 2023-07-26
AU2022235598A1 (en) 2022-11-03
IL275850B (en) 2022-11-01
US20210317519A1 (en) 2021-10-14
US20220213543A1 (en) 2022-07-07
BR112020013718A2 (pt) 2020-12-01
US12071660B2 (en) 2024-08-27
US11306355B2 (en) 2022-04-19
JP2021509587A (ja) 2021-04-01
CN111971386A (zh) 2020-11-20
KR20200108319A (ko) 2020-09-17
WO2019136413A1 (en) 2019-07-11
EP3737748A1 (en) 2020-11-18
JP2022174153A (ja) 2022-11-22
MX2020007259A (es) 2022-08-26
IL275850B2 (en) 2023-03-01
AU2019205416B2 (en) 2022-07-14
MA51633A (fr) 2020-11-18
JP7136899B2 (ja) 2022-09-13
AU2019205416A1 (en) 2020-07-23
US11987843B2 (en) 2024-05-21
JP7539948B2 (ja) 2024-08-26
US20200370114A1 (en) 2020-11-26
EP3737748A4 (en) 2021-10-20
KR102503884B1 (ko) 2023-03-07
NZ765943A (en) 2022-10-28
IL275850A (en) 2020-08-31
SG11202006511YA (en) 2020-08-28
US11959136B2 (en) 2024-04-16
KR20230030037A (ko) 2023-03-03
CN115181783A (zh) 2022-10-14
IL296932A (en) 2022-12-01
US20220282323A1 (en) 2022-09-08

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