KR20200044677A - 암 약물 반응성 판단을 위한 바이오 마커, 이를 이용한 암 약물 반응성 판단 방법 및 이를 위한 암 약물 반응성 진단칩 - Google Patents

암 약물 반응성 판단을 위한 바이오 마커, 이를 이용한 암 약물 반응성 판단 방법 및 이를 위한 암 약물 반응성 진단칩 Download PDF

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KR20200044677A
KR20200044677A KR1020190096410A KR20190096410A KR20200044677A KR 20200044677 A KR20200044677 A KR 20200044677A KR 1020190096410 A KR1020190096410 A KR 1020190096410A KR 20190096410 A KR20190096410 A KR 20190096410A KR 20200044677 A KR20200044677 A KR 20200044677A
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정종선
이선호
홍종희
최익원
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Priority to KR1020190098597A priority patent/KR20200044683A/ko
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Abstract

본 발명은 암을 포함하는 질병 관련 특이 유전자 변이 지문 (Genetic Variation Fingerprints)을 기능정보를 가진 하플로타입으로 변형 후 약물의 분자 프로파일의 결합분석에 의해 약물의 반응성을 신뢰성 있게 예측할 수 있는 새로운 학습모델인 약물 적응증 및 반응 예측 시스템 및 방법인 GBLscan(Genetic biomarker Labeling Scan)에 관한 것으로, 본 발명은 수집된 학습정보로부터 유전체에 포함된 유전정보에 대한 약물을 구성하는 구성정보의 반응성 상관관계를 선형 희귀 및 딥러닝 기계학습에 의해 학습하는 학습모듈과; 분석정보를 수신하여 상기 분석정보에 포함된 유전체에 대한 약물의 반응성 예측결과를 산출하는 예측모듈과; 상기 학습모듈에 의해 학습된 반응성 예측알고리즘을 저장하는 저장모듈을 포함하여 구성되고: 상기 학습정보는, 생체 외 세포주 및 생체 내 임상연구에 대한 약물의 반응성 정보이다. 이와 같은 본 발명에 의하면, 본 발명에서는 임상시험으로부터 수집되는 유전체에 대한 약물의 반응성 결과들로부터, 약리 효과가 밝혀지지 않은 유전체와 약물의 반응성 정도를 예측할 수 있는 효과가 있다.

Description

암 약물 반응성 판단을 위한 바이오 마커, 이를 이용한 암 약물 반응성 판단 방법 및 이를 위한 암 약물 반응성 진단칩 { Bio-Marker for Prediction of Drug Sensitivity, Estimation Method for Prediction of Drug Sensitivity and Diagnosing Chip for Prediction of Drug Sensitivity }
본 발명은 암약물반응성 및 유전자발현정보 및 복제수변이(CNV)를 이용한 기능 정보를 포함하는 하플로타입(haplotype) 바이오마커를 예측하여, 암 약물 반응성을 신뢰성 있게 예측 및 약 레이블링을 할 수 있게 하는 새로운 학습 모델인 GBLscan (Cancer Biomarker Labeling Scan)에 관한 것으로, 본 특허는 중소벤처기업부에서 지원하는 2018년도 산학연협력 기술개발사업(No.S2634294)의 연구수행 결과물을 포함한다.
최근에 차세대시퀀싱 (NGS, next generation sequencing) 기술의 혁신으로 복잡하고 다양한 암을 이해하는데 많은 발전이 이루어졌다. 또한, 국제적인 컨소시엄의 노력으로 이러한 암 종의 체세포 돌연변이에 대한 카탈로그뿐만 아니라 총체적인 암 유발 돌연변이(driver mutation) 데이터베이스도 개발 및 발표되었다[선행기술문헌 001, 002 및 003 참조].
이러한 국제적인 컨소시엄 연구 성과로 인해서 개별 종양의 특정 유전체 지문(genomic fingerprint)에 대한 암 맞춤치료에 대한기대 또한 급속도로 커지게 되었다.
그러나 현재 암 환자 및 제약업계를 포함한 의료계의 모든 이해 관계자들에게 임상에서 승인되고 사용되는 새로운 맞춤 암 치료제는 여전히 충분하지 않은 실정이다[선행기술문헌 004 참조]. 따라서, 유전체정보와 항암제의 반응 사이의 개인 맞춤을 위한 연관성을 예측하기 위한 효율적이고 체계적인 접근이 필요하게 되었다.
그리고 암 세포주 및 약물 독성 데이터의 분자 프로파일링 데이터를 통합하기 위해 여러 가지 협력 컨소시엄이 이루어졌다[www.lincsproject.org, 선행기술문헌 005 및 006 참조]. 이러한 컨소시엄은 항암제 독성 및 개인에 특화된 맞춤 약물을 예측할 수 있는 유전체 바이오마커 (biomarker)를 밝히는 것이 가장 중요한 목표이다.
암에서의 약물 독성을 위한 세포주 유전체 DB중에서 GDSC (GDSC, Genomics of Drug Sensitivity in Cancer)는 공개적으로 이용 가능한 데이터베이스의 한 예이다. 특히, GDSC는 265개의 항암 화합물에 대하여 1,070 개의 인간 암세포의 약물 독성 정보를 실험적으로 측정한 공용 데이터베이스이다[선행기술문헌 006 참조].
여기서 사용된 GDSC의 세포주 프로젝트는 다음의 사이트에서 공개되었다 (CCLP: COSMIC Cell Lines Project, http://cancer.sanger.ac.uk/cell_lines). 이러한 공용 자원은 유전체 기반 정밀 암 치료제 실현에 큰 도움이 될것으로 기대된다.
그러나 이러한 데이터베이스의 잠재적인 가치에도 불구하고 높은 차원의 데이터와 복잡성으로 인해 통합 분석에는 많은 기술적인 문제가 존재한다. 따라서, 항암 약물 독성에서 분자 바이오마커를 체계적으로 규명하기 위한 많은 계산방법이 개발되었지만[선행기술문헌 005, 007, 008, 009, 010, 011, 012, 013 참조], 이러한 노력에도 불구하고 약물 독성은 특정 세포주 및 주어진 유전자 변이 세트에 제한되는데, 이는 모든 사람의 유전정보는 모두 다르고, 공통적인 변이는 전체에서 일부분이기 때문이다.
정보 기술의 최근 발전으로 앞에서 언급한 복잡한 문제를 해결하기 위해 점점 더 많이 사용되는 방법이 딥러닝 모델(deep learning model) 또는 심층학습 모델이라 부른다[선행기술문헌 014 참조]. 딥러닝 학습 방법은 대량의 고차원 원시 데이터로부터 심층 기계 학습을 하는 기술의 한 분야이다[선행기술문헌 015 참조].
최근까지는 학습을 하기에 계산 양의 한계로 직접적으로 많은 제한이 있었지만[선행기술문헌 016 참조]. 그러나 방법론적 개선과 병렬 컴퓨팅에 의한 강력한 기계를 사용하면서 수천 개의 숨겨진 유닛을 포함하는 다양한 레이어로 딥러닝 학습 모델을 교육할 수 있게 되었다[선행기술문헌 017, 018, 019, 020 참조].
한편, 약리적, 유전체, 전사체 및 후성유전체 데이터와 그들의 약물반응성 데이터와 같은 여러 유형의 구조 정보를 조작할 수 있기 때문에 최소한의 지침으로 약물-표적 상호 작용 예측에 적합하게 되었다[선행기술문헌 014 참조].
제약 업계는 신약 개발을 위해 이러한 유형의 데이터를 활용하는 딥러닝 학습에 많은 기대감을 보여주기 시작했다[선행기술문헌 021 참조]. 최근에는 약물 개발에서 인공 지능을 사용하여 몇 가지 유망한 결과가 입증되었고[선행기술문헌 022, 023, 024, 025 참조], 약물-표적 프로파일 및 다른 전통적인 기계 학습 모델에 비해 우수한 예측 정확도를 갖는 약물 재사용(drug repositioning)도 가능해졌다[선행기술문헌 026 및 027 참조]. 그러나 대다수의 접근방법은 오히려 개념 증명에 그쳤고, 딥러닝 학습을 통한 약물 발견의 생산 가능 솔루션은 부족한 현실이다[선행기술문헌 028 참조].
현재 PubChem(pubchem.ncbi.nlm.nih.gov)은 미국 NCBI(국립기술정보센터)에서 운영하고 있고, 약 1억개 화합물(compounds), 2억 개의 물질(substances) 및 바이오에세이(bioassay)정보를 보유하고 있다(en.wikipedia.org/wiki/PubChem).
또한, 이러한 화합물(compound)은 약리적 작용기(pharmacophore descriptor)로 표현하는 많은 방법들이 존재한다[선행기술문헌 029, 030, 031, 032 및 033 참조]. 그 중에서 파델(PaDELL) 방법은 약물에서 1,875 (1D 및 2D 1,444개, 그리고 3D 431개) 특징(feature) 및 12개의 지문(전체 약 16,092 비트)으로 표현할 수 있다[선행기술문헌 029 참조].
그리고 유전체에서 변이는 다양한 특징들을 추출할 수 있다. 특히, 질병원인 변이를 추출하는 종래의 방법 및 툴 들은 선행기술문헌 034 내지 056에 개시된 바 있다.
따라서, 종래기술은 개별적으로 QSAR(Quantitative structureactivity relationship), 약물 세포독성 데이터를 사용한 약물개발, 딥러닝 (Deep Learning)기반 전장유전체(whole genome sequencing)의 발현조절, 구조적 변이 등이 독립적으로 적용되어 활용되었다.
그러나 본 발명에서는 약물(drugs)-세포(cell lines)-독성(IC50) 데이터에 이종 특성정보(유전체정보, QSAR정보 및 발현정보)를 통합한 AI 딥러닝 방법인 CDRscan(Cancer drug response scanning)은 예측 정확도가 이전 컴퓨터 모델링 접근법과 비교하여 현저히 향상되었고, 특히, 버추얼 약물(drugs) vs. 버추얼 세포(cell lines) 혹은 표적단백질의 상호작용 모델을 제안한 바 있다.
여기서, 2개의 다른 이종 특성 버추얼 정보는 첫 번째가 약물인 경우, 파델(PaDELL) 방법 혹은 선행기술문헌 029 내지 033에 개시된 방법 들이 적용될 수 있다.
그리고 두 번째는 전장 유전체(혹은 표적 단백질)의 지문(Genomic fingerprint, or a set of mutation features)에 대한 문헌방법[선행기술문헌 034 내지 056 참조]으로 설명이 될 수 있고, 가장 표준적인 딥러닝 방법은 선행기술문헌 057에 개시된 바와 같다.
따라서 본 방법은 정확한 약물반응 예측모델 및 약물 재사용/재배치(drug repositioning), 화학 물질의 스크리닝 및 새로운 항암제 후보 발굴 및 환자 맞춤형 항암제 선택을 위한 임상의사결정지원시스템(Clinical decision supporting system) 에 사용될 수 있다.
그리고 최근에 재사용/재배치 (drug repositioning)관련 암약물반응스켄(CDRscan) 논문이 본사에 의하여 출판이 되었다[선행기술문헌 058 참조].
즉, 유전자발현 및 시스템적 통계적인 방식으로 주어진 약물 및 표적유전자 약 그리고 표적 후보유전자들의 발현정보 및 바이오마커 정보를 활용한 약물반응성 연구가 최근에 발표되었다.
본 논문에서는 바이오마커 자체에 대한 연구는 없었지만, 알려진 유전자 바이오마커 및 발현정보를 활용하여 주요표적에 대한 주요 약물 몇 개에 대하여 저해 능력(inhibition)을 CCLE(Cancer Cell Line Encyclopedia), CTRP(Cancer Therapeutics Response Portal, Broad) 및 일부 GDSC를 활용하여 예측(CARE)하고 검증하는 결과를 보여주었다[선행기술문헌 059 참조].
또한, eQTL (expression and Quantitative Trait Loci), 즉 발현과 유전체 변이간의 질병 혹은 표현형 연관관계에 대한 주요 연구가 많이 발표되었다[선행기술문헌 060 참조]. 그리고, pQTL (protein and Quantitative Trait Loci), 즉 단백질 생성과 유전체 변이간의 질병 혹은 표현형 연관관계에 대한 주요 연구 역시 많이 발표되었다[선행기술문헌 061 참조].
그러나 cQTL (Copy Number Variation and Quantitative Trait Loci), 즉 약물반응성 및 유전자 복제수 증가 혹은 감소 변이인 CNV(copy number variation)와 유전체 변이간의 약물반응 혹은 약물 표현형 연관관계에 대한 연구는 아직까지 발표된 적이 없다.
따라서, 본 GBLscan(genetic biomarker label scan)방법에서는 (a) eQTL (expression and Quantitative Trait Loci), 즉 발현과 유전체 변이간의 질병 혹은 표현형 연관관계, (b) cQTL (Copy Number Variation and Quantitative Trait Loci), 즉 유전자 복제 수 변이(copy amplification) 및 감소 (copy deletion)과의 연관관계는 아직 참고문헌이 존재하지 않는다.
본 발명에서 약물타입(DrugClass)에 대한 정의는 약물 표적들의 타입(type) 및 약물의 관능기적 유사한 기능 타입, 혹은, 약물이 영향을 주는 범주의 유전자그룹, 약물 패스웨이(drug pathway) 혹은 약물 시그널링 패스웨이(drug signaling pathway), 등은 모두 하나의 통칭 약물타입(DrugClass)로 설명을 한다. 또한, 기능하플로타입은 일반적으로 사용하는 하플로타입인 유전자에서 페이싱(phasing)이 된 여러개의 로커스 (locus)들에 대한 반수체(haplotype)과 달리, 본 발명에서는 인간유전체 버전인 Dec. 2013 (GRCh38/hg38): Genome Reference Consortium Human 38 (GCA_000001405.15), https ://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.26 를 기반으로 차세대 시퀀싱 리드(read) 데이터를 정렬을 하게 되면, 각 유전자 로커스에서 지노타입 형태로 정보가 읽히게 된다. 이러한 지노타입형태는 1:homo, 2:hetero 혹은 3: alt home형태로 표현 되는데, 그러한 지노타입의 모음을 상대 하프로타입 이라고 할 수 있다. 그리고, 특정 로커스의 단일 혹은 조합으로 구성된 상대 하플로타입이 특정 유전자의 발현과 연관이 있다면 이것을 기능하프로타입 이라고 본 발명에서 정의한다.
한편, 아래 첨부된 비 특허 선행기술 문헌을 주요 내용별로 구분하면, 비특허문헌,
(001 - 004)은 유전체 정보와 항암제의 반응 사이의 연관성 논문이고;
(005 - 013)은 암 유전체 약물독성 및 COSMIC 세포주 프로젝트 문헌이며;
(014 - 018)은 딥러닝 심층학습 모델의 약리학 및 유전체관련 논문이고;
(019 - 028)은 딥러닝 심층학습 모델의 신약 개발에 사용된 논문이고;
(029 - 056)은 약물 및 변이를 특징(feature)으로 표현하는 방법 및 논문이고;
(057 - 058)은 딥러닝 방법론 및 알고리즘에 대한 논문이고;
(059 - 059)은 약물 재창출 혹은 약물반응성 예측 논문이고,
(060 - 061)은 eQTL 및 pQTL 방법론 및 알고리즘에 대한 논문이다.
(001) Forbes, S. A., et al. COSMIC: somatic cancer genetics at high-resolution. Nucleic Acids Research. 45, 777-783 (2017). (002) Lawrence, M. S., et al. Discovery and saturation analysis of cancer genes across 21 tumour types. Nature. 505, 495-501 (2014). (003) Stratton, M.R., Campbell, P.J. & Futreal, P.A. The cancer genome. Nature 458, 719-724 (2009). (004) Williams SP, & McDermott U. The pursuit of therapeutic biomarkers with high-throughput cancer cell drug screens. Cell Chemical Biology. 24, 1066-1074 (2017). (005) Barretina, J, et al. The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity. Nature. 483, 603-7 (2012). (006) Yang, W., et al. Genomics of Drug Sensitivity in Cancer (GDSC): a resource for therapeutic biomarker discovery in cancer cells. Nucleic Acids Research. 41, 955-961 (2013). (007) Basu, A., et al. An interactive resource to identify cancer genetic and lineage dependencies targeted by small molecules. Cell. 154, 1151-1161 (2013). (008) Iorio, F., et al. (2016). A Landscape of pharmacogenomic interactions in cancer. Cell. 166, 740-754 (2016). (009) Garnett, M. J., Edelman, E. J., Heidorn, S. J., Greenman, C. D., Dastur, A., Lau, K. W., Greninger, P., Thompson, I. R., Luo, X. & Soares, J. Systematic identification of genomic markers of drug sensitivity in cancer cells. Nature. 483, 570-575 (2012). (010) Menden, M.P., Iorio, F., Ballester, P.J., Saez-Rodriguez, J., Garnett, M., McDermott, U., & Benes, C.H. Machine learning prediction of cancer cell sensitivity to drugs based on genomic and chemical properties. PLoS ONE. 8. e61318 (2013). (011) Rubio-Perez, C., Tamborero, D., Schroeder, M., Antolin, A., Deu-Pons, J., Perez-Llamas, C., Mestres, J., Gonzalez-Perez, A., & Lopez-Bigas, N. In silico prescription of anticancer drugs to cohorts of 28 tumor types reveals targeting opportunities. Cancer Cell. 27, 382-396 (2015). (012) Seashore-Ludlow, B., et al. Harnessing connectivity in a large-scale small-molecule sensitivity dataset. Cancer Discovery. 5, 1210-1223 (2015). (013) Yadav, B., et al. Quantitative scoring of differential drug sensitivity for individually optimized anticancer therapies. Scientific Reports. 4 (2015). (014) Vanhaelen, Q., et al.. Design of efficient computational workflows for in silico drug repurposing. Drug Discovery Today. 22, 210-222 (2017). (015) Mamoshina, P., Vieira, A., Putin, E. & Zhavoronkov, A. Applications of deep learning in biomedicine. Molecular Pharmaceutics. 13, 1445-1454 (2016). (016) Ramsundar, B., Kearnes, S., Riley, P., Webster, D., Konerding, D. & Pande, V. Massively multitask networks for drug discovery. arXiv:1502.02072 (2015). (017) Dahl, G. E., Jaitly, N. & Salakhutdinov, R. Multi-task neural networks for QSAR predictions. arXiv:1406.1231 (2014). (018) Nantasenamat C, Isarankura-Na-Ayudhya C, Naenna T, Prachayasittikul V. "A practical overview of quantitative structure-activity relationship". Excli J. 8: 7488(2009). (019) Ebuka, D Quantitative structureactivity relationship study on potent anticancer compounds against MOLT-4 and P388 leukemia cell lines, Journal of Advanced Research, 10.1016(2016) (020) Yuan, Y., et al. DeepGene: an advanced cancer type classifier based on deep learning and somatic point mutations. BMC Bioinformatics. 17, 243-256 (2016). (021) Smalley, E. AI-powered drug discovery captures pharma interest. Nature Biotechnology. 35, 604-605 (2017).) (022) Baskin, I.I., Winkler, D. & Tetko, I.V. A renaissance of neural networks in drug discovery. Expert Opinion on Drug Discovery. 11, 785-95 (2016). (023) Gonczarek, A., Tomczak, J.M., Zareba, S., Kaczmar, J. Dabrowski, P. & Walczak, MJ. Learning deep architectures for interaction prediction in structure-based virtual screening. NIPS, 30, (2016). (024) Pereira, J. C., Caffarena, E. R., & Dos Santos, C. N. Boosting docking-based virtual screening with deep learning. Journal of Chemical Information and Modeling. 56, 2495-2506 (2016). (025) Unterthiner, T, Mayr, A, Klambauer, G, Steijaert, M, Wegner, J.K., Ceulemans, H, & Hochreiter, S. Deep learning as an opportunity in virtual screening. NIPS, 27, (2014). (026) Wen M., Zhang Z., Niu S., Sha H., Yang R., Lu H., & Yun Y. Deep-learning-based drug-target interaction prediction. Journal of Proteome Research. 16, 1401-1409 (2017). (027) Aliper A, Plis S, Artemov A, Ulloa A, Mamoshina P, & Zhavoronkov A. Deep learning applications for predicting pharmacological properties of drugs and drug repurposing using transcriptomic data. Molecular Pharmaceutics. 13, 2524-2530 (2016). (028) Ching, T., et al. Opportunities and obstacles for deep learning in biology and medicine. bioRxiv. doi: http://dx.doi.org/10.1101/142760 (2017). (029) Yap CW. PaDEL-Descriptor: An open source software to calculate molecular descriptors and fingerprints. Journal of Computational Chemistry. 32, 1466-1474(2011) (030) Schneider, G.; Clement-Chomienne, O.; Hilfiger, L.; Schneider, P.;Kirsch, S.; Bohm, H-J. and Neihart, W. Virtual Screening for Bioactive Molecules by Evolutionary De Novo Design Angew. Chem. Int. Ed., 39, 4130-4133(2000) (031) Schneider, G.; Lee, M-L.; Stal, M. and Schneider, P. De novo design of molecular architectures by evolutionary assembly of drug-derived building blocks J. Comp-Aid. Mol. Des., 14, 487-494(2000) (032) Pearlman, S. R. and Smith, K. M. Novel Software Tools for Chemical Diversity, Perspectives in Drug Discovery and Design, 9/10/11: 339-353,(1998). (033) Burden, F. R. Molecular identification number for substructure searches, J. Chem. Inf. Comput. Sci. 29 , 225-7(1989). (034) SIFT: Kumar, Prateek, Steven Henikoff, and Pauline C. Ng. "Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm." Nature protocols 4.7: 1073-1081(2009). (035) Polyphen-2 : I. A. Adzhubei, S. Schmidt, L. Peshkin et al., method and server for predicting damaging missense mutations,Nature Methods, vol. 7, no. 4, pp. 248249, 2010 (036) LRT S. Chun and J. C. Fay, of deleterious mutations within three human genomes,Genome Research, vol. 19, no. 9, pp. 15531561, 2009. (037) Polyphen-2 HDIV n HDVAR Score: Yunos, R. I. M., Ab Mutalib, N. S., Khor, S. S., Saidin, S., Nadzir, N. M., Razak, Z. A., & Jamal, R. (2016). Characterisation of genomic alterations in proximal and distal colorectal cancer patients (No. e2109v1). PeerJ Preprints. (038) MutationAccessor1: Reva, B., Antipin, Y., & Sander, C. (2011). Predicting the functional impact of protein mutations: application to cancer genomics. Nucleic acids research, 39(17), e118-e118. (039) MutationAccessor2: Gnad, F., Baucom, A., Mukhyala, K., Manning, G., & Zhang, Z.. Assessment of computational methods for predicting the effects of missense mutations in human cancers. BMC genomics, 14(3), S7(2013). (040) MUTATIONTASTER: Dong, C., Wei, P., Jian, X., Gibbs, R., Boerwinkle, E., Wang, K., & Liu, X. Comparison and integration of deleteriousness prediction methods for nonsynonymous SNVs in whole exome sequencing studies. Human molecular genetics, 24(8), 2125-2137(2014). (041) MutationAccessor and Mutation Taster: Oishi, Maho, et al. "Comprehensive Molecular Diagnosis of a Large Cohort of Japanese Retinitis Pigmentosa and Usher Syndrome Patients by Next-Generation SequencingDiagnosis of RP and Usher Syndrome Patients by NGS." Investigative ophthalmology & visual science 55.11 (2014): 7369-7375. (042) PhyloP46way_placental and PhyloP46way_vertebrate: Pollard, Katherine S., et al. "Detection of nonneutral substitution rates on mammalian phylogenies." Genome research 20.1: 110-121(2010). (043) GERP++_RS Score: Davydov, E. V., Goode, D. L., Sirota, M., Cooper, G. M., Sidow, A., & Batzoglou, S.. Identifying a high fraction of the human genome to be under selective constraint using GERP++. PLoS computational biology, 6(12), e1001025(2010). (044) B62 Score: Tsuda, H., Kurosumi, M., Umemura, S., Yamamoto, S., Kobayashi, T., & Osamura, R. Y. HER2 testing on core needle biopsy specimens from primary breast cancers: interobserver reproducibility and concordance with surgically resected specimens. BMC cancer, 10(1), 534(2010). (045) Siphy : Garber, Manuel, et al. "Identifying novel constrained elements by exploiting biased substitution patterns." Bioinformatics 25.12: i54-i62(2009). (046) CHASM : H. Carter, J. Samayoa, R. H. Hruban, and R. Karchin, of driver mutations in pancreatic cancer using cancerspecific high-throughput annotation of somatic mutations (CHASM),Cancer Biology & Therapy, vol. 10, no. 6, pp. 582587(2010). (047) Dendrix: F. Vandin, E. Upfal, and B. J. Raphael, novo discovery of mutated driver pathways in cancer,Genome Research, vol. 22, no. 2, pp. 375385(2012). (048) MutsigCV: M. S. Lawrence, P. Stojanov, P. Polak et al., heterogeneity in cancer and the search for new cancer-associated genes,Nature, vol. 499, no. 7457, pp. 214218. [68] M. Kanehisa and S. Goto, kyoto encyclopedia(2013) (049) FATHMM: Shihab, Hashem A., et al. "Predicting the functional, molecular, and phenotypic consequences of amino acid substitutions using hidden Markov models." Human mutation 34.1: 57-65(2013). (050) VEST3_score: Carter, Hannah, et al. "Identifying Mendelian disease genes with the variant effect scoring tool." BMC genomics 14.3: S3(2013). (051) MetaSVM: Nono, Djotsa, et al. "Computational Prediction of Genetic Drivers in Cancer." eLS (2016). (052) MetaLR : Dong, Chengliang, et al. "Comparison and integration of deleteriousness prediction methods for nonsynonymous SNVs in whole exome sequencing studies." Human molecular genetics 24.8: 2125-2137(2014). (053) CADD: Kircher, Martin, et al. "A general framework for estimating the relative pathogenicity of human genetic variants." Nature genetics 46.3: 310-315(2014). (054) CADD 2 : Velde, K. Joeri, et al. "Evaluation of CADD scores in curated mismatch repair gene variants yields a model for clinical validation and prioritization." Human mutation 36.7: 712-719(2014). (055) CADD 3: Mather, Cheryl A., et al. "CADD score has limited clinical validity for the identification of pathogenic variants in non-coding regions in a hereditary cancer panel." Genetics in medicine: official journal of the American College of Medical Genetics (2016). (056) ParsSNP: Kumar, Runjun D., S. Joshua Swamidass, and Ron Bose. "Unsupervised detection of cancer driver mutations with parsimony-guided learning." Nature genetics 48.10: 1288-1294(2016). (057) Deep Learning: Yann Lecun, Y., Bengio, Y. & Hinton, G. Nature. 521, 436-444 (2015) (058) Cancer Drug Response Profile scan (CDRscan): A Deep Learning Model That Predicts Drug Effectiveness from Cancer Genomic Signature: Yoosup Chang, Scientific Report,. 8857 (2018) (059) Genome-scale signatures of gene interaction from compound screens predict clinical efficacy of targeted cancer therapies. Peng Jiang, et al., Cell Systems, 6,1-12 (2018) (060) eQTL: Maud Fagny, et al., PNAS, E7841-E7850 (2017) (061) pQTL: Jerome Carayol, et al., Nat Commun., 8:2084 (2017)
본 발명은 상기와 같은 종래의 문제점을 해결하기 위하여 안출된 것으로, 본 발명은 전술한 바와 같은 기술배경 및 사회적 요구에 따라, 암 약물의 반응성을 반응 대상 유전체의 유전특성 및 지문을 기능성 정보를 가진 하플로타입으로 변환하여 높은 정밀도의 약물 적응증 및 민감성 예측 시스템을 제공하기 위한 것으로, 본 발명의 구체적인 목적은, 공지된 비-임상용 세포주 유전체, 그것 들의 유전자 발현정보 및 유전자 복제수변이, 그리고 생체내 약물반응과 관련을 양적형질위치(QTL: quantitative trait loci)들의 모음(기능성 하플로타입) 정보기반 선형 회귀 모델링 및 딥러닝 기계학습을 신뢰성 있게 예측할 수 있는 예측 시스템을 제공하기 위한 것이다.
그리고 본 발명에서는 본 발명에 의한 GBLscan방법에 의해 유전자 RNA발현 및 복제수변이(CNV)와 상관관계가 높은 양적 형질 위치 (QTL)들을 수집하여 기능정보를 가진 다중변이기반 하플로타입을 생성하고 약물 민감성 및 반응성을 효과적으로 필터링하는 가상임상(In Silico Clinical Trial)을 위한 약물 반응성을 예측하는 방법을 제공하기 위한 것이다.
상기한 바와 같은 목적을 달성하기 위한 본 발명의 특징에 따르면, 본 발명은 검사 대상 양적형질 위치(QTL)들의 위치 모음 생성하는 단계와; 기능 하플로타입(FRH)과 약물반응 상관관계 계산하는 단계와; 그리고, 기능 하플로타입기반 약물반응 예측모델 생성하는 단계로 구성된다.
우선, 양적형질 위치 (QTL)들의 위치 모음 생성하기 위한 제1단계에서는; 기능 연관 하플로타입(FRH)과 약물반응성 상관관계 계산을 수행하기 위하여, (A) 약 1,000개의 세포주에서 약 4백만 변이와 약 20,000 유전자 발현 상관관계 계산하고, 그리고, (B) 약물(265개)과 1,000개 셀라인 유전체의 각 20,000여개 유전자발현 및 유전자 복제수변이 들과의 상관관계 계산한다.
이때, (A)단계 및 (B)단계는 공통 변수로 유전자 발현 및 유전자 복제수변이들을 모두 포함하는데, 이러한 공통변수인 유전자발현 정보를 활용하여 약물반응에 영향을 주는, 다중 혹은 단일변이와 연관을 가진 변이를 수집한다. 이것을 양적형질 위치 (QTL)들의 위치 모음이라고 한다.
그리고 유전체통합 DB에서 각 세포주 유전체에서 단일 및 다중변이정보를 수집하여 기능 하플로타입을 만들고 동일 세포주에서 약물반응성 정보와 함께 추출하고, 이러한 기능 하플로타입 들을 기능 하플로타입, FRH(Functionally relevant haplotope)으로 정의하고, FRH를 해시넘버 (hash number)로 표현 한다.
그리고 제2단계에서는, 기능하플로타입(FRH)과 약물반응 상관관계 계산하기 위하여, 하플로타입(FRH)를 해시넘버(hash number)로 변한하고, 변환된 해시넘버를 사용하여 약물반응성정보와 조합 상관관계 테스트(Pairwise Pearson Test)를 수행하고, 이를 모든 암 종에서 위의 작업을 반복 한다.
기능하플로타입기반 약물반응 예측모델 생성하는 제3단계에서는, 특정 암에서 약물 패스웨이(drug pathway)기반 약물반응 예측모델 생성관련 과정을 다음과 같이 수행한다.
(1) 기능연관 하플로타입과 특정 암 및 특정약물 패스웨이(Drug Pathway)와 관련된 각 약물과 상관관계를 계산하고, (2) 기능하플로타입 및 약물반응성 상관관계 메트릭스에서 X축 및 Y축의 상관관계 정보를 클러스터링을 하며, (3) 각 예측모델에서 유의성(p-value)이 높은 것을 수집하여 모델에 상호작용 기능을 모델에 적용하여 선형 회귀 모델을 계산한다, 그리고, 마지막으로 (4) NGS 데이터를 입력으로 하여 약물반응성과 연관을 가진 기능하플로타입를 계산하고 선형 회귀 모델을 사용하여 약물반응성을 예측한다.
그리고 본 발명은, 전술한 바와 같은 기능 하플로타입 정보를 활용하여 약물반응성 예측 모델을 계산하기 위해, 검사 대상 유전체로부터 수집된 염기서열에서 다수의 변이들을 활용하여 기능 하플로타입 들을 계산하는 단계와: 선형 회귀 모델의 해를 계산하는 단계와; 이러한 해를 이용하여 암약물 중에 민감성이 높은 암 약물을 선별하는 시스템을 포함한다.
한편, 본 발명의 다양한 실시예 중 일 실시예를 설명하면, 본 발명은 (A) 약물반응에 영향을 미치는 변이들에 대한 양적형질위치(QTL)들의 위치모음을 산출하는 단계와; (B) 상기 양적형질위치(QTL)에 포함된 변이에 대한 기능하플로타입을 생성하는 단계와; (C) 상기 기능하플로타입을 기반으로 변이와 약물반응 상관관계 계산하는 단계; 그리고 (D) 상기 기능하플로타입을 기반으로 약물반응성을 예측하는 단계를 포함하여 수행될 수 있다.
이때, 상기 제(A)단계의 양적형질위치(QTL)들의 위치모음을 산출은, (A1) 복수의 세포주로부터 변이들과 유전자 RNA 발현의 상관관계를 도출하는 단계와; (A2) 약물들과 복수의 셀라인 유전체에 포함된 유전자 RNA발현 및 유전자 복제수변이(CNV)들과의 상관관계 도출하는 단계와; (A3) 상기 제(A1)단계 및 제(A2)단계에서 공통 적으로 상관관계에 영향을 미치는 유전자 RNA 발현 또는 유전자 복제수변이에 대한 유전자 발현 정보를 산출하는 단계; 그리고 (A4) 상기 유전자 발현정보에 관여된 단일 또는 다중 변이를 산출하여, 약물반응에 영향을 미치는 변이들에 대한 양적형질위치(QTL)를 산출하는 단계를 포함하여 수행되는 양적형질위치(QTL)들의 위치모음 생성 단계를 포함하여 수행될 수 있다.
그리고 상기 제(B)단계의 기능하플로타입의 생성은, 유전체통합DB로부터 양적형질위치(QTL)에 포함된 단일 또는 다중변이에 대한 하플로타입을 약물반응성과 함께 추출하여 생성될 수도 있다.
또한, 상기 기능하플로타입은, 유전자 RNA발현(Exp)과 약물반응성과의 상관관계 정보와; 유전자 다중변이(loci)와 약물반응성과의 상관관계 정보를 포함하여 구성될 수도 있다.
한편, 상기 기능하플로타입은, 유전자 복제수변이(CNV)와 약물반응성과의 상관관계 정보와; 유전자 다중변이(loci)와 약물반응성과의 상관관계 정보를 포함하여 구성될 수도 있다.
여기서 상기 유전자 다중변이(loci)는, 양적형질위치(QTL)기반으로 선별된 로커스(locus)들의 모음일 수도 있다.
그리고 상기 유전체통합DB는, 지노타입(Genotype)으로 구성된 셀라인(Cell Lines) 통합 DB일 수도 있다.
또한, 상기 약물 반응성은, ln Ic50 값으로 표현될 수도 있다.
그리고 상기 유전자 RNA발현은, 과발현(over-expression), 변화없음(normal) 및 저발현(under-exprfession)으로 구분될 수도 있다.
또한, 상기 복제수변이(CNV)는, 증폭(amplification), 변화없음(normal) 및 감소(deletion)로 구분될 수도 있다.
한편, 상기 제(C)단계의 상관관계 계산은, (C1) 유전자 다중변이(loci)와 연관된 유전자 RNA발현(Exp)를 판별하는 단계와; (C2) 상기 기능하플로타입으로부터 상기 유전자 RNA발현(Exp)에 대한 약물반응성을 산출하여 상기 유전자 다중변이(loci)에 대한 약물반응성을 판별하는 단계; 그리고 (C3) 상기 기능하플로타입에 포함된 유전자 다중변이(loci)와 약물반응성과의 상관관계 정보로부터 산출된 약물반응성과 상기 제(C2)단계에서 판별된 약물반응성을 비교하여 검증하는 단계를 포함하여 수행될 수도 있다.
그리고 상기 제(C1)단계의 연관은, 상기 유전자 다중변이(loci)가 포함된 세포주 및 상기 세포주에 포함된 유전자 RNA발현(Exp)정보를 판별함에 의해 수행될 수도 있다.
또한, 상기 제(D)단계의 약물반응성을 예측은, 유전자 RNA발현 차이에 대한 약물반응의 차이가 과발현보다 저발현이 큰 경우, 유전자 RNA의 저발현이 약물반응에 민감한 것으로 판단하고; 유전자 RNA발현 차이에 대한 약물반응의 차이가 과발현보다 저발현이 작은 경우, 유전자 RNA의 과발현이 약물반응에 민감한 것으로 판단할 수도 있다.
그리고 상기 제(D)단계의 약물반응성을 예측은, 과발현 집단의 유전자 RNA발현 차이에 대한 약물반응 절대값 민감도 최고치의 차이값이 저발현 집단의 유전자 RNA발현 차이에 대한 약물반응 절대값 민감도 최고치의 차이값보다 크면, 유전자 RNA의 과발현이 유전자 다중변이(loci)타입과 연관된 것으로 판별하고; 과발현 집단의 유전자 RNA발현 차이에 대한 약물반응 절대값 민감도 최고치의 차이값이 저발현 집단의 유전자 RNA발현 차이에 대한 약물반응 절대값 민감도 최고치의 차이값보다 작으면, 유전자 RNA의 저발현이 유전자 다중변이(loci)타입과 연관된 것으로 판별할 수도 있다.
한편, 상기 기능하플로타입은, 해시넘버 (hash number)로 표현될 수도 있다.
그리고 상기 기능하플로타입과 약물반응의 상관관계는, 해시넘버를 이용하여, 약물반응성정보와 조합상관관계 테스트(Pairwise Pearson Test)를 수행함에 의해 산출될 수도 있다.
한편, 본 발명은 전술한 바와 같은 방법으로 기능하플로타입을 생성하는 약물반응성, 유전자발현정보 및 복제수 변이를 이용한 기능하플로타이핑 시스템을 포함한다.
이때, 상기 기능하플로타입은, 약물에 대한 반응성 진단, 약물에 대한 환자군을 선별하는 동반진단을 위한 바이오마커 발굴, 약물표적발굴 또는 약물에 대한 가상임상에 사용될 수도 있다.
위에서 살핀 바와 같은 본 발명에 의한 가상임상을 위한 암약물반응성, 연계된 유전자발현정보 및 복제수 변이를 이용한 기능 하플로타이핑 시스템 및 방법에서는 다음과 같은 효과를 기대할 수 있다.
즉, 본 발명에서는 체내(in vivo), 체외(in vitro) 혹은 유전정보에 대한 알려진 약물의 반응성 결과들로부터, 약리 효과가 밝혀지지 않은 약물의 반응성 정도를 예측할 수 있는 효과가 있다.
또한, 본 발명은 유전체의 변이정보에 대한 약물을 구성하는 약리 관능기의 반응성 상관관계를 도출할 수 있으므로, 분석대상인 유전체의 변이 및 약물의 약리 관능기를 추출하면, 해당 유전체에 대한 약물의 반응성 정도를 신뢰성 있게 예측할 수 있는 효과가 있다.
그리고 본 발명은 유전체의 변이 특성정보에 대한 약물타입의 반응성 상관관계를 도출할 수 있으므로, 분석대상인 유전체의 변이에 대한 특성정보 및 약물타입정보를 알면, 해당 유전체에 대한 약물의 반응성 정도를 신뢰성 있게 예측할 수 있는 효과가 있다.
이를 통해 본 발명은, 미지의 고분자화합물(약물 개발 대상 물질)의 특정 유전체를 포함하는 세포주 혹은 인체에 대한 반응성을 임상시험 전에 예측할 수 있으므로, 신약 개발에 따른 시간 및 비용을 현저하게 줄일 수 있는 효과가 있으며, 이미 개발된 약물에 대하여도, 임상에서 밝혀진 유전체 이외의 다른 유전체에 대한 반응성 정도를 미리 예측할 수 있으므로 기존 약물에 대한 다른 용도의 발견 및 부작용 발견에 대한 연구 비용 및 시간을 현저히 줄여주는 효과가 있다.
도 1은 본 발명에 의한 약물반응예측을 위한 양적 형질 위치(QTL), 유전복제수변이 및 RNA발현예를 도시한 예시도.
도 2는 본 발명에 의한 유전적 바이오마커를 활용한 약물반응성 계산 스키마를 도시한 예시도.
도 3은 본 발명에 의한 유방암의 유전적 바이오마커와 약물반응성의 관계를 도시한 예시도.
도 4는 본 발명에 의한 NGS입력과 약물반응 및 RNA발현 네트워크를 도시한 예시도.
도 5는 본 발명에 의한 세포주 약물반응 값(IC50)과 기능하플로타입의 상관관계를 도시한 예시도.
도 6은 본 발명에 의한 양적형질 위치(QTL)와 약물반응 상관관계를 도시한 예시도.
도 7은 본 발명에 의한 변이, RNA발현, 유전자복제수변이 및 약물반응 네트워크를 도시한 예시도.
도 8은 본 발명에 의한 변이와 상관관계 세포주, 암, 약물반응, RNA발현 및 CNV증폭 예를 도시한 예시도.
도 9는 본 발명에 의한 기능하플로타입과 약물반응성 상관관계 계산 스키마를 도시한 예시도.
도 10은 본 발명에 의한 기능하플로타입와 약물반응성 네트워크를 도시한 예시도.
도 11은 본 발명에 의한 기능하플로타입과 유전자발현 및 유전자복제수변이 예를 도시한 예시도.
도 12는 본 발명에 의한 기능하플로타입 정의를 도시한 예시도.
도 13은 본 발명에 의한 FRH 방법과 유전자 발현과 약물 반응성 예측 예를 도시한 예시도.
도 14는 본 발명에 의한 FRH의 일 예시로 평균 IC50 값의 차이가 1.0인 실시예를 도시한 예시도.
도 15는 본 발명에 의한 FRH의 일 예시로 평균 IC50 값의 차이가 1.5인 실시예를 도시한 예시도.
도 16은 본 발명에 의한 기능하플로타입과 유전자발현 실시 예를 도시한 예시도.
도 17은 본 발명에 의한 특정 암 약물 패스웨이(pathway)기반 약물반응 예측모델 생성예를 도시한 예시도.
도 18은 본 발명에 의한 기능하플로타입과 약물반응성 연관관계 R^2를 도시한 예시도.
도 19는 도 18에 도시된 예에서, Afatinib 약물과 FRH 상관관계가 높은 FRH의 실시예를 도시한 예시도.
도 20은 도 18에 도시된 예에서, Afatinib 약물과 FRH 상관관계가 높은 FRH를 사용한 예측 모델의 일 실시예를 도시한 예시도.
도 21은 본 발명에 의한 FRH를 사용한 혈액암의 약물반응성 예측의 일 실시예를 도시한 예시도.
도 22는 본 발명에 의한 FRH를 사용한 활용가능 시스템의 일 예를 도시한 예시도.
도 23은 본 발명에 의한 FRH 바이오마커를 이용하여 암 및 약물 동반진단 칩을 제작하는 방법의 일 예를 도시한 예시도.
도 24는 본 발명에 의한 바이오마커 표현구조의 구성을 설명하는 예시도.
이하에서는 첨부된 도면을 참조하여 본 발명의 구체적인 실시예에 의한 가상임상을 위한 암약물반응성, 연계된 유전자발현정보 및 복제수 변이를 이용한 기능 하플로타이핑 시스템 및 방법을 살펴보기로 한다.
설명에 앞서 먼저, 본 발명의 효과, 특징 및 이를 달성하는 방법은 첨부되는 도면과 함께 상세하게 후술되어 있는 실시 예에서 명확해진다. 그러나 본 발명은 이하에서 개시되는 실시 예들에 한정되는 것이 아니라 서로 다른 다양한 형태로 구현될 수 있으며, 단지 본 실시 예들은 본 발명의 개시가 완전하도록 하고, 본 발명이 속하는 기술분야에서 통상의 지식을 가진 자에게 발명의 범주를 완전하게 알려주기 위해 제공되는 것이며, 본 발명은 청구항의 범주에 의해 정의될 뿐이다.
본 발명의 실시 예들을 설명함에 있어서 공지 기능 또는 구성에 대한 구체적인 설명이 본 발명의 요지를 불필요하게 흐릴 수 있다고 판단되는 경우에는 그 상세한 설명을 생략할 것이며, 후술되는 용어들은 본 발명의 실시 예에서의 기능을 고려하여 정의된 용어들로서 이는 사용자, 운용자의 의도 또는 관례 등에 따라 달라질 수 있다. 그러므로 그 정의는 본 명세서 전반에 걸친 내용을 토대로 내려져야 할 것이다.
도 1은 본 발명에 의한 약물반응예측을 위한 양적 형질 위치(QTL), 유전복제수변이 및 RNA발현예를 도시한 예시도이고, 도 2는 본 발명에 의한 유전적 바이오마커를 활용한 약물반응성 계산 스키마를 도시한 예시도이며, 도 3은 본 발명에 의한 유방암의 유전적 바이오마커와 약물반응성의 관계를 도시한 예시도이고, 도 4는 본 발명에 의한 NGS입력과 약물반응 및 RNA발현 네트워크를 도시한 예시도이며, 도 5는 본 발명에 의한 세포주 약물반응 값(IC50)과 기능하플로타입의 상관관계를 도시한 예시도이고, 도 6은 본 발명에 의한 양적형질 위치(QTL)와 약물반응 상관관계를 도시한 예시도이며, 도 7은 본 발명에 의한 변이, RNA발현, 유전자복제수변이 및 약물반응 네트워크를 도시한 예시도이고, 도 8은 본 발명에 의한 변이와 상관관계 세포주, 암, 약물반응, RNA발현 및 CNV증폭 예를 도시한 예시도이며, 도 9는 본 발명에 의한 기능하플로타입과 약물반응성 상관관계 계산 스키마를 도시한 예시도이고, 도 10은 본 발명에 의한 기능하플로타입와 약물반응성 네트워크를 도시한 예시도이며, 도 11은 본 발명에 의한 기능하플로타입과 유전자발현 및 유전자복제수변이 예를 도시한 예시도이고, 도 12는 본 발명에 의한 기능하플로타입 정의를 도시한 예시도이며, 도 13은 본 발명에 의한 FRH 방법과 유전자 발현과 약물 반응성 예측 예를 도시한 예시도이고, 도 14는 본 발명에 의한 FRH의 일 예시로 평균 IC50 값의 차이가 1.0인 실시예를 도시한 예시도이며, 도 15는 본 발명에 의한 FRH의 일 예시로 평균 IC50 값의 차이가 1.5인 실시예를 도시한 예시도이고, 도 16은 본 발명에 의한 기능하플로타입과 유전자발현 실시 예를 도시한 예시도이며, 도 17은 본 발명에 의한 특정 암 약물 패스웨이(pathway)기반 약물반응 예측모델 생성예를 도시한 예시도이고, 도 18은 본 발명에 의한 기능하플로타입과 약물반응성 연관관계 R^2를 도시한 예시도이며, 도 19는 도 18에 도시된 예에서, Afatinib 약물과 FRH 상관관계가 높은 FRH의 실시예를 도시한 예시도이고, 도 20은 도 18에 도시된 예에서, Afatinib 약물과 FRH 상관관계가 높은 FRH를 사용한 예측 모델의 일 실시예를 도시한 예시도이며, 도 21은 본 발명에 의한 FRH를 사용한 혈액암의 약물반응성 예측의 일 실시예를 도시한 예시도이고, 도 22는 본 발명에 의한 FRH를 사용한 활용가능 시스템의 일 예를 도시한 예시도이며, 도 23은 본 발명에 의한 FRH 바이오마커를 이용하여 암 및 약물 동반진단 칩을 제작하는 방법의 일 예를 도시한 예시도이고, 도 24는 본 발명에 의한 바이오마커 표현구조의 구성을 설명하는 예시도이다.
본 발명은 기본적으로, (A) 암 환자에게서 임상적으로 추출하기 어려운 유전자 RNA 발현정보 및 복제수변이 정보를 양적형질 위치(QTL)를 선행 계산하고, (B) 비임상 세포주 DB(GDSC 및 CCLE)와 같은 공용 데이터를 이용하여 유전자 RNA 발현정보 및 복제수변이 정보와 약물반응성 상관관계 실험 정보를 확보한 후, 상기 제(A)단계 및 제(B)단계를 통합하여 양적형질 위치(QTL)와 암약물반응 상관성을 계산하여 예측모델을 생성한다.
그리고 암 환자에게서 획득될 수 있는 유전체 정보를 기반으로 기능정보를 포함한 하플로타입을 계산하여 암환자의 약물반응성정보를 예측한다.
도 1에는 약물반응예측을 위한 양적 형질 위치(QTL), 유전복제수변이 및 RNA발현 예가 도시되어 있다. 즉, ①의 eQTL 실험 예문에서는, 변이와 발현의 직접(cis) 및 간접(trans)방식에 의해 조절되는 것이 나타나있고, ②의 Drug-Gene Expression은 약물과 RNA 발현의 상관관계를 보여준다. 그리고 ③의 Drug Cell viabillity는 약물의 농도와 세포의 활성관계를 보여주고, ④의 Drug-CNV는 약물의 농도와 유전자 복제수 변이(CNV)와의 상관관계를 보여준다. 그리고 ⑤의 Expression-CNV는 유전자 발현과 복제수 변이(CNV)와 상관관계를 보여준다.
즉, 도 1은 약물의 농도와 RNA 발현 및 유전자복제수변이(CNV)가 서로 상관관계를 가지고 있다는 것을 보여주고, 또한, 많은 경우에 RNA발현 및 유전자복제수변이(CNV)는 그것의 원인이 되는 단일 및 다중 변이와의 상관관계가 있음을 보여준다.
도 2에는 유전적 바이오마커를 활용한 약물반응성 계산 스키마에 있어, 대부분의 알려진 활성 약물이 약물에 민감한 군과 약물에 저항성을 주는 군으로 나누어지고, 이때, 민감성 및 저항성은 유전적 바이오마커와 밀접하게 연결되어 있다.
여기서, 유전적 바이오마커는 생식 및 체세포 변이, 드라이버변이, 복제수변이, 기능 하플로타입 변이, 후성 변이인 methylation 및 유전자 발현 등으로 구성된다.
그리고 도 3에는 유방암의 유전적 바이오마커와 약물반응성의 관계의 일예가 도시되어 있다. 유전적바이오마커들의 메커니즘을 나타내는 A) 계략도에서 Her2 유전자가 과발현되어 있을 때, 세포표면 수용체를 표적으로 하는 약물인 tratuzumab와 세포 내부의 cytoplasm에서의 길항제를 표적으로 하는 lapatinib 및 두 개의 바이오마커 PI3CA와 PTEN의 위치가 나타나 있다. B) 그래프에는 tratuzumab 및 lapatinib의 경우 wild type과 PI3CA가 변이를 가진 경우와, PTEN까지 기능을 못하는 경우에 대하여 약물반응성이 계산된 결과가 나타나 있고, 약물 pathway 메카니즘에서 약물표적의 위치에 따라 바이오마커의 변이가 1개 및 2개에 대한 약물반응성이 달라짐이 도시되어 있다.
한편, 도 4에는 NGS 입력과 약물반응 및 RNA발현 네트워크의 일 예가 도시되어 있다.
NGS 입력과 약물반응 및 RNA발현 네트워크의 기본 구조는, A) NGS 입력데이터로부터 선행으로 계산된 양적형질 위치(QTL)기반 유전자 RNA 과발현/저발현 및 유전자 복제수 변이의 증폭/감소를 예측하고, B) 비임상(in vitro) 공용 약물 반응성 데이터와 유전자발현 데이터와 상관관계 정보를 이용하여, C) 임상(in vivo)에서 양적형질 위치(QTL)기반 약물반응을 예측한다.
본 발명은 A) 양적형질 위치(QTL) 정보를 확보하고, B) 유전자 RNA 발현정보와 약물반응성 실험데이터를 라이브러리(DB)화하고, C) 약물반응성을 예측하는 과정으로 설명될 수 있다. 이는 일반적으로 환자에 대하여 B) 단계의 약물반응정보 및 유전자발현 정보를 짧은 시간에 확보하기가 어럽거나 일부는 거의 불가하기 때문이다.
따라서, 도 1 내지 도 4는 환자로부터는 유전체정보 및 RNA발현정보 기반 양적형질 위치(QTL) 정보와 관련을 가진 단일 및 다중 변이정보를 확보하고, 공용 약물반응성 정보인 비임상(in vitro) 세포주 실험 정보와 연결을 만들고, 임상(in vivo)에서 환자에게 적용하는 방식이다.
도 5는 세포주 약물반응 값(IC50)과 기능하플로타입의 상관관계 예시도로, 도 5에는 최종적으로 세포주들과 약물반응성 정보 및 기능하플로타입의 상관관계를 Pearson 상관관계로 계산하는 예가 도시되어 있다. 도 5에서는 265개 약물을 18(Dn)개 약물 pathway로 분류하여 적용을 하고, 기능하플로타입은 12개 암종(Cancer N)에 대하여 각 세포주 유전체에서 양적형질 위치(QTL) 정보기반으로 이미 약물반응과 관련을 가지고 있는 변이들의 조합(다중변이)들을 해시 수(hash number)로 바꾸어서, Pearson 상관관계를 구하는 형태의 계략도를 보여준다.
그리고 도 6은 양적형질 위치(QTL)와 약물반응 상관관계 예시도도를 보여 주고 있다. ①은 eQTL, ②는 cQTL, ③은 dQTL, ④는 유전자 RNA 발현과 유전자복제수변이의 상관관계, ⑤는 약물농도와 유전자 RNA발현, ⑥은 약물농도와 유전자복제수변이와의 상관관계를 보여준다.
본 발명에서 ① eQTL 및 ② cQTL이 사용되고, ③ 내지 ⑥은 결과물로서 혹은 상관관계가 있는 상태를 보여준다.
도 7은 변이, RNA발현, 유전자복제수변이 및 약물반응의 네트워크 구조를 나타내는 예시도로, 도 6에 도시된 내용을 서로 간의 연관성 관점으로 네트워킹을 만든 계략도이고, 지노타입(단일 변이), 하플로타입(조합 및 다중변이) 및 약물반응과의 조건식들의 관계를 보여준다.
본 발명에서 기능하플로타입은 단일변이 및 다중변이를 모두를 통칭한다.
그리고 각 변이들은 모두 양적형질 위치(QTL)의 방법에 의하여, 유전자 RNA 발현과 유전자복제수변이의 상관관계가 p-value < 10^5 이하로 정하여 수집된다.
한편, 도 8에는 변이와 상관관계 세포주, 암, 약물반응, RNA 발현 및 CNV 증폭의 예가 도시되어 있다. 이때, 상호 연관된 변이와 세포주, 암, 약물반응, RNA 발현 및 CNV 증폭의 예는 최종적으로 선별된 양적형질 위치(QTL)기반 약물반응성-변이-RNA발현-CNV가 하나의 객체로서 묶여 있다.
또한, 변이(지노타입)은 염색체의 위치, 변이 타입, 아미노산변이, 바이오마커로서의 활용 유무정보 등과도 연결될 수 있다.
한편, 도 9에 도시된 기능하플로타입과 약물반응성 상관관계 계산 스키마에 의하면, 본 발명은 크게 제1단계 및 제2단계로 구성된다.
제1단계는 양적형질 위치(QTL)들의 위치 모음을 생성하는 단계이고, 제2단계는 기능하플로타입과 약물반응 상관관계 계산하는 단계이다.
구체적으로, 제1단계는 1) 변이(전체 4백만)와 유전자들(20,000)의 발현 상관관계 계산하는 단계와, 2) 약물(265개)과 셀라인 유전체(1,000개)의 유전자발현과(각 20,000 여개)의 상관관계 계산하는 단계와, 3) 1) 및 2)에서 다중 혹은 단일변이와 연관을 가진 유전자발현 패턴이 같은 것을 수집하는 단계 및 4) 유전체통합DB에서 하플로타입(단일 및 다중변이)을 약물반응성과 함께 추출하는 단계를 포함하여 수행된다.
그리고 제2단계는 5) 이와 같은 하플로타입을 기능과 연관관계 하플로타입인 기능하플로타입(FRH)으로 정의하고, FRH를 해시넘버 (hash number)로 표현하는 단계 및 6) 해시넘버와 약물반응성 조합 상관관계 테스트(Pairwise Pearson Test)를 계산하는 단계를 포함하여 수행되고, 이들 과정을 모든 암 종에서 반복 수행한다.
또한, 도 10에는 기능하플로타입과 약물반응성의 네트워크가 도시된 것으로, 도 9에 도시된 기능 하플로타이핑 방법을 구현하기 위한 시스템을 나타낸다.
즉, QTL방법에 의한 단일 혹은 다중변이와 유전자 RNA발현 및 약물 반응데이터의 관계 및 Genotype으로 구성된 Cell Lines(c1~c-N) 통합 DB에서 다중변이를 추출하여 기능하플로타입을 추출하는 과정이 도시되어 있다.
그리고 도 11의 기능하플로타입과 유전자 RNA 발현 및 유전자복제수변이 예시도에는, 기능적인 관점에서 도 9의 과정을 구체적으로 설명을 한다.
즉, A)는 약물반응성 정보와 유전자 RNA발현의 관계를 최종결과물인 다중면이(loci)와 Exp으로 표현되고, 약물반응성 정보와 유전자복제수변이(CNV)의 관계를 loci와 CNV로 표현됨을 나타내고 있다.
그리고 B)는 이에 대한 상세 스키마로, 약물의 경우 Ln Ic50의 경우 '-2'는 민감성을 나타내고, '0'은 중간 민감성을 나타내며, '2'는 약물내성을 나타낸다.
한편, 다중변이(loci)는 양적형질 위치(QTL)기반으로 선별된 locus들의 모음으로 설명되고, loci는 다양한 타입인 loci-1, loci-2, ... loci-N으로 표현이 되며, 각 loci 타입은 전체 집단에서의 빈도(frequency)를 가지게 된다.
그리고 각각의 빈도 군에서 평균 약물반응성 정보인 ln IC50값(X, Y, …Z)이 산출된다.
한편, 유전자 RNA발현의 경우는 3가지 다른 발현 패턴을 가지는데, 이는 과발현(over-expression), 변화없음(normal), 및 저발현(under-exprfession)형식으로 표현이 될 수 있고, loci 타입과 같은 방식으로 각 타입에서 빈도(frequency)가 그룹화가 될 수 있고, 각 그룹에서의 평균 Ln IC50값(X', Y', …Z')이 산출된다.
그리고 같은 방식으로 복제수변이인 CNV의 경우도 증폭(amplification), 변화없음(normal) 및 감소(deletion)로 구분되고, 각 빈도(frequency) 군(group)에서 평균 약물반응성 정보인 ln IC50값(X", Y", …Z")이 산출된다.
또한, loci, gene-exp, gene-CNV 모두 다 빈도값이 가중치형태로 0~1의 스케일로 표현될 수 있다.
따라서, B)는 loci와 Exp, loci와 CNV에 가중치가 곱해진 것으로 설명될 수 있다.
도 12는 기능 하플로타입 정의를 나타내는 것으로, 본 발명에서 상대 기능 하플로타입(relative-Haplotype)이라 함은, 기능하플로타입(FRH)과 eQTL에서 유의성을 주는 locus들의 조합(Loci)으로서 기능적으로 연관된 하플로타입 관계를 말한다.
여기서, 기능하플로타입은 게놈 어셈블버전인 Dec. 2013 (GRCh38/hg38): Genome Reference Consortium Human 38 (GCA_000001405.15), https://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.26 참고(reference)서열을 기준으로 개별 세포주 및 개인이 다른 다형성정보(allele)를 가진 형태로 정의된다. 그리고 FRH(Exp | IC50)는 유전자 발현차이에 대한 약물반응 절대값 민감도 차이(Normal 대 Over 혹은 Under)를 나타내고, FRH(Loci | IC50)는 세포주 들에 대한 기능적으로 연관된 하플로타입에 대응된 약물반응 절대값 민감도 차이를 말한다.
따라서, 약물반응값과 유전자 RNA발현의 관계와, Loci의 특정 타입과 같은 패턴의 유전자 RNA발현을 연결을 지을 수 있고, 일 예로, 도 12에서, [2]의 loci-3과 [1]Exp-over와 연결되어 있음을 보여준다.
즉, loci-3은 RNA발현이 over가 되는 것과 QTL관계에 있고, RNA발현이 over가 되어 있을 때 약물반응성 값은 loci-3의 약물발현성 값과 같은 것으로 예측할 수 있다.
또한, [3]에 도시된 바와 같이, FRH(Exp | IC50)은 변화없음(normal)에서의 약물반응성값과 비교하여 절대값 약물반응성 차이가 큰 값(max)를 나타내고, FRH(Loci | IC50)는 다양한 하플로타입에서의 약물반응 변화없음(normal)에서의 약물반응성 값과 비교하여 절대값 약물반응성 차이가 가장 큰 값(max)를 나타낸다.
한편, 도 13에는 FRH 방법과 유전자 발현과 약물 반응성을 예측한 예를 통하여, 도 12에 정의된 하플로타입을 좀 더 구체적으로 설명을 할 수 있다.
즉, 도 13의 [1] 및 [2]은 유전자 발현차이에 대한 약물반응 절대값 민감도 max 차이(Normal 대 Over 혹은 Under)를 각각 나타내고, [3]은 세포주 들에 대한 기능적으로 연관된 하플로타입에 대응된 약물반응 절대값 민감도 max 차이를 나타내며, [4]는 발현 차이에 대한 약물반응의 차이가 저발현 보다 더 크면 s=1, 그리고, 그 반대면 s=0이라 정의하는 것을 나타낸다. 따라서, s=1은 과발현이 약물반응에 민감하다는 것이고, S=0은 저발현이 약물반응이 민감하다는 것을 의미한다.
그리고 [5]는 [1] 및 [2]에서 정의한 ds^over가 ds^under보다 크면 m=1, 그렇지 않으면 m=0이라 정의하는 것을 나타내고, m=1이면 특정 loci타입이 유전자의 경우 과발현을 의미하고, m=0일 경우 유전자의 저발현이 특정 loci타입와 연관됨을 의미한다.
한편, 도 14는 FRH의 한 예시로 평균 IC50 값의 차이가 '1.0'인 예의 데이터를 표로 보여준다. 여기서, 평균 약물반응성(LN IC50)이 1인 경우 높은 양성 상관관계를 보인다 (pval <2.812*10^-7).
그리고, 도 15는 FRH의 한 예시로 평균 IC50 값의 차이가 '1.5'인 예의 데이터를 표로 보여준다. 여기서, 평균 약물반응성(LN IC50)이 1.5인 경우 훨씬 높은 음성 상관관계를 보인다 (pval <7.191*10^-7).
또한, 도 16에는 기능적으로 연관된 하플로타입과 유전자발현 실시예가 도시되어 있다.
이 실시예의 경우, 혈액암(blood)의 경우, FRH이 4개의 타입을 포함하는 것을 보여준다. 이때, 변이(locus위치)는 1: Ref Homo, 2: Hetero, 3: Alt Homo의 3개의 다른 지노타입(genotype)으로 설명이 된다.
그리고 첫 번째 컬럼의 혈액암(blood)에서 2개의 locus의 조합으로 표현하면, 각 타입의 빈도(frequency)는 두 번째 컬럼, '12'는 1명, '21'은 1명, '11'은 2명 그리고 '22'는 153명으로 다수를 보여준다.
또한, Afatinib 약물에 대하여 '11'의 경우 유전자발현은 과발현(2.404)이고, 약물반응성(LN IC50)은 -1.21, 즉 Afatinib 약물에 대하여 민감성이 있다는 것을 보여준다. 이 예시의 내용을 요약하면, 2개의 locus를 조합으로 하는 FRH는 '11' 타입에서 EGFR 유전자가 과발현되고, 그것이 원인이 되어서 약물반응성이 민감하다. 따라서, FRH는 '11' 타입을 가지는 세포주 및 환자는 Afatinib약물에 민감하다고 예측할 수 있다.
그리고 도 17에는 특정 암 약물 패스웨이(pathway)기반 약물반응 예측모델 생성 방법이 도시되어 있다. 이에 도시된 바와 같이, 특정 암 약물 패스웨이(pathway)기반 약물반응 예측모델은 1) 기능연관 하플로타입(FRH)과 특정암의 특정약물 패스웨이(Drug Pathway)와 관련된 각 약물과의 상관관계를 계산하고, 2) FRH 및 약물반응성 상관관계로 구성되는 메트릭스 X축 및 Y축의 상관관계 정보를 클러스터링을 하고, 3) 예측모델에서 유의성(p-value)이 높은 것을 수집하여, 이들의 상호작용 기능을 모델에 적용하고, 4) NGS 데이터를 입력으로 하여 약물반응성과 연관을 가진 FRH를 계산하여 약물반응성을 예측한다.
한편, 도 18에 도시된 기능하플로타입과 약물반응성 연관관계 R^2는 도 17의 예측모델 생성 방법의 2)상관관계 정보의 클러스터링 과정의 일 예를 설명한다. 여기서, 암 타입은 혈액암이고, Y: EGFR pathway 9 drugs, X: FRH 하플로타입 그리고 각 pixel은 약물반응값과 FRH의 Pearson 상관관계를 나타내고, 여기서 *는 유의성(pval<0.05)을 나타내고, **는 유의성(pval<0.01)을 나타낸다.
또한, 파랑색은 양성으로의 상관관계를 보여주고, 주황색은 음성으로의 상관관계을 보여준다.
그리고 도 19는 도 18의 예에서, Afatinib 약물과 FRH 상관관계가 높은 FRH의 예를 보여준다. 특히, 4개 FRH(LAMC2_2, JPH1_2, PRKCB_3, CML_1)와 약물반응성 상관관계를 결과를 나타내고 있다.
한편, 도 20은 도 18의 예에서, Afatinib 약물과 FRH 상관관계가 높은 FRH를 사용한 예측 모델의 일 예로, 도 17의 예측모델 생성 방법의 3) 상호작용 기능을 모델에 적용한 일 예를 설명한다. 특히, p-val<0.01이하인 FRH 21개는 상호작용 텀(term)으로 넣고, 선형 회귀(Leaner Regression)모델을 적용한 예시이다. 이 경우는 Pearson 상관관계가 0.89이다.
또한, 도 21은 혈액암 환자 1명 유전체의 기능하플로타입을 가지고 다양한 약물(AP-24534, PAC-1, Obatoclax Mesylate, Bleomycin 등)에 대한 예측된 IC50(real)값들을 보여준다. 이 결과 어떤 약물은 높은 민감도가 예측된 반면, 떤 약물은 높은 저항성이 예측된 것으로 나타난다. 그리고 실제값(IC50(real))의 민감도와 기능하플로타입 군의 평균 IC50(ave)값 사이에 일치성이 있음을 보여준다.
한편, 도 22에 도시된 바와 같이, 본 발명에 의한 차세대시퀀싱데이터 기반의 개인별 기능하플로타입들이 수집되면 다양한 영역에서 활용이 가능하다. 즉, 가상임상시험 및 실제임상시험, 신약표적발굴, 질병 약물 민감도 진단, 및 동반진단 바이오마커 발굴 시스템 등에 활용가능하다.
본 발명에서는 전술한 바와 같은 기능하플로타입을 통하여, 약물 반응성을 진단하는데 유의성있는 바이오 마커들을 발굴하였다.
발굴된 바이오 마커는 변이를 포함하는 DNA 염기로 크게 암의 종류(CancerClass) 별로 해당 암에 대한 약물의 반응성에 영향을 미치는 바이오 마커들과, 약물의 작용 경로(pathway) 및 표정 대상에 따라 구분되는 약물타입(DrugClass)에 별로 약물의 반응성에 영향을 미치는 바이오 마커들로 구분된다.
이하에서는 이와 같은 바이오 마커들을 종류별로 구분하여 정리하기로 한다.
먼저, 암타입(CancerClass)에 대한 구분 종류가 [표 1]에 정리되어 있다.
암타입(CancerClass)에 속하는 TCGA(the cancer genome atlas)의 정의
구분 CancerClass TCGA CANCER_NAME
1 혈액암(blood) ALL
LAML
LCML
Acute lymphoblastic leukemia, Acute Myeloid Leukemia, Chronic Myelogenous Leukemia
2 여성암(breast, ovary) BRCA
BLCA
UCEC
OV
CESC
Bladder Urothelial Carcinoma, Breast invasive carcinoma, Ovarian serous cystadenocarcinoma,
Cervical squamous cell carcinoma and endocervical adenocarcinoma, Uterine Corpus Endometrial Carcinoma
3 뇌종양(brain) LGG
NB
GBM
Glioblastoma multiforme, Brain Lower Grade Glioma, Neuroblastoma (nb)
4 두경부암(head&neck) HNSC
THCA
Head and Neck squamous cell carcinoma, Thyroid carcinoma
5 폐암(lung) LUAD
LUSC
NSCLC
Lung adenocarcinoma, Lung squamous cell carcinoma
6 육종암(bone) SARC Sarcoma
위 [표 1]에 기재된 Cancer Class는 암발생부위 및 원인별 구분으로, 혈액암(blood), 여성암(breast, ovary), 뇌종양(brain), 두경부암(head&neck), 폐암(lung), 육종암(bone)으로 구분된다.
그리고 TCGA는 'The cancer genome atlas'에서 분류한 세부 암 유형을 나타내고, 각 항목에 대한 정보가 [표 1]에 기재되어 있다.
전술한 바와 같이, 본 발명에서는 기능하플로타입을 이용한 GBLscan을 통하여, 각 암 종류별로, 약물에 대한 반응성에 영향을 미치는 바이오마커를 산출하였다.
구체적으로, 암타입(Cancer Class)의 구분 별로, 혈액암(blood)의 바이오 마커 376개(표 2참조), 여성암(breast, ovary) 바이오 마커 95개(표 4참조), 뇌종양(brain)의 바이오 마커 1194개(표 6참조), 두경부암(head&neck)의 바이오 마커 77개(표 8참조), 폐암(lung)의 바이오 마커 477개(표 10참조), 육종암(bone)의 바이오 마커 397개(표 12참조)이다.
아래 [표 2] 내지 [표 12]에는 암 종류별로 본 발명에 의해 발굴된 바이오 마커가 표시되어 있다. 여기서 바이오 마커는 단일변이 및 다중변이의 조합일 수 있고, 변이의 형태 역시 단일염기다형성변이(SNV), 인델(Indel), 유전자 복제수 변이(CNV), 염색체 전위(chromosomal rearrangement) 등 다양한 형태의 변이일 수 있다.
한편, [표 2] 내지 [표 23] 및 [표 15] 내지 [표 42]에 표시되는 Gene_EXP는 도 24에 도시된 바와 같이, 해당 바이오마커의 mRNA 발현유전자의 명칭을 나타낸다. 그리고 상기 바이오 마커는 『표식1_표식2_표식3_표식4』의 형태로 표현되는데, 표식1은 바이오 마커가 포함된 염색체번호를 나타내는 것으로 1 내지 22 또는 X, Y 중 어느 하나의 값을 갖는다. 그리고 표식2는 해당 염색체 상에서 변이가 발생된 염기서열의 시작위치를 나타내는 것이며, 표식3은 변이 전 정상 염기를 나타내는 것으로 참조게놈(GRCh/hg38 기준)상의 해당 위치의 염기를 말한다. 한편, 표식4는 변이된 염기를 나타내는 것이다.
즉, [표 2] 내지 [표 23] 및 [표 15] 내지 [표 42]에 표시된 『표식1_표식2_표식3_표식4』의 형태로 표현된 바이오 마커는, 표식1염색체에 있어, 표식2 번째 부터의 표식3 염기가 표식4로 변이된 염기서열을 말한다.
따라서, 이때, 바이오 마커는 구체적으로, 표식1염색체에 있어, 표식2 번째 위치에서부터의 표식3의 염기 길이까지의 자리가 표식4의 염기로 구성되는 염기서열을 말한다.
예를 들어, [표 2]의 서열1의 바이오마커가 『14_30910985_T_G』로 표현되었는데, 이는 14번 염색체의 30910985번째 염기가 G인 염기서열이 바이오 마커임을 의미하고, [표 2]의 서열5의 바이오마커가 『13_113524119_TGTCA_T, 13_113510211_T_C, 13_113495576_T_C, 13_113503637_G_T, 13_113539563_C_T』로 표현되었는데, 이는 13번 염색체의 113524119번째 염기부터 113524123까지의 염기가 T이고(4자리의 염기는 '결실'됨을 의미한다), 13번 염색체의 113510211번째 염기가 C이며, 13번 염색체의 113495576번째 염기가 C이고, 13번 염색체의 113503637번째 염기가 T이며, 13번 염색체 113539563번째 염색체가 T인 염기서열이 바이오마커임을 의미한다.
도 24에 도시된 예를 살피면, [표 23]의 서열 29에 기재된 바이오 마커는, 'SLC6A12'염색체에서, 2번 염색체의 190673067번째 염기가 GT이고, 9번째 염색체의 114323991번째 염기가 G인 것을 의미한다. 이때, 2번 염색체의 190673067번째 염기는 G가 GT로 치환된 것임을 말한다.
한편, 1 내지 22번 염색체의 전체 염기서열은 전술한 바와 같이, 게놈 어셈블버전인 Dec. 2013 (GRCh38/hg38): Genome Reference Consortium Human 38 (GCA_000001405.15), https://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.26 참고(reference)서열을 기준으로 한다.
blood(혈액암) 약물에 대한 반응성 바이오 마커
Cancer_Class Gene_exp 바이오 마커 (발현조절 FRH 변이세트)
##blood Gene_EXP:MARCH4 14_30910985_T_G
##blood Gene_EXP:ACBD3 9_33799000_T_C
##blood Gene_EXP:ACCS 11_44107740_C_A,7_135196179_C_T,9_61066407_C_T
##blood Gene_EXP:ACSS2 8_143538013_T_C
##blood Gene_EXP:ADA 13_113524119_TGTCA_T,13_113510211_T_C,13_113495576_T_C,13_113503637_G_T,13_113539563_C_T
##blood Gene_EXP:ADAT2 5_141490949_A_G,17_41827392_A_C
##blood Gene_EXP:ADCY9 6_42632921_A_T
##blood Gene_EXP:AEBP1 6_72148713_GTT_G,13_24781827_GTT_GT,13_37746457_TAA_TA,20_34750522_TA_T,17_64858885_TA_T
##blood Gene_EXP:AEBP1 6_72148713_GTT_G,6_146672170_GA_G,2_53919250_GA_G,13_24781827_GTT_GT,13_37746457_TAA_TA
##blood Gene_EXP:AGPAT2 21_25714604_C_A
##blood Gene_EXP:AGTRAP 2_178769706_G_T
##blood Gene_EXP:AMFR 11_63488969_C_G
##blood Gene_EXP:ANGPTL2 2_55222182_T_C
##blood Gene_EXP:ANKRD22 7_38349808_A_G
##blood Gene_EXP:ANPEP 2_182063828_G_C,3_75338856_G_A
##blood Gene_EXP:ANXA2 4_36214492_A_T
##blood Gene_EXP:AP2S1 10_68572309_C_T
##blood Gene_EXP:AP4B1 2_127620227_T_G,2_219228043_A_C,3_49714047_T_G,5_180948948_T_G
##blood Gene_EXP:APEH 15_70699666_A_G
##blood Gene_EXP:APOC1 5_54519891_G_C
##blood Gene_EXP:ARHGAP22 5_41008678_A_G,5_41009140_C_T,11_130470775_T_C
##blood Gene_EXP:ARID1A 7_21862122_CT_C,11_63382198_CA_C
##blood Gene_EXP:ARL3 2_182063828_G_C
##blood Gene_EXP:ARPC1A 9_39118208_G_T,9_41938349_G_T,9_61081995_G_T
##blood Gene_EXP:ARRB1 16_46710765_T_A
##blood Gene_EXP:AS3MT 7_20786651_GA_G,1_225419673_GA_G,5_95507014_TA_T,9_120989554_CT_C,2_11192112_CT_C
##blood Gene_EXP:ASCC1 2_186602115_A_C,10_97445797_T_G
##blood Gene_EXP:ASH2L 9_33796659_C_T,9_33796705_C_G,9_33797971_T_A,9_33797993_G_A,9_33797994_C_T
##blood Gene_EXP:ASPH 19_39902109_T_G
##blood Gene_EXP:ASXL1 7_5217942_G_A,11_89192074_G_C
##blood Gene_EXP:ATP11A 2_85880864_T_C,3_132388903_G_A,9_128288585_G_C
##blood Gene_EXP:ATP2A3 1_24074187_A_G,2_68818005_T_G
##blood Gene_EXP:ATP6V0A1 11_63382198_CA_C
##blood Gene_EXP:ATP7B 2_182063828_G_C,5_176336593_G_A,5_176347862_G_T
##blood Gene_EXP:AZI1 4_85635_C_T,4_85671_G_A,4_86908_C_T
##blood Gene_EXP:AZU1 2_135023465_C_T,2_135133038_G_C,11_129905704_C_T
##blood Gene_EXP:B3GNT8 3_74301846_T_C,17_7771466_C_T,17_7801487_C_G
##blood Gene_EXP:BARD1 9_133405414_T_G
##blood Gene_EXP:BAZ2A 6_83940645_G_T
##blood Gene_EXP:BCL11B 11_63382198_CA_C,6_152444591_GA_G,10_67956845_TA_T,3_196805277_CT_C,7_28494775_GT_G
##blood Gene_EXP:BET1 1_1638657_A_G
##blood Gene_EXP:BLCAP 4_48609132_A_G
##blood Gene_EXP:BLM 9_33795626_A_C
##blood Gene_EXP:BST1 3_75338856_G_A
##blood Gene_EXP:C10orf11 1_13344015_T_C
##blood Gene_EXP:C10orf25 17_39270861_TA_T
##blood Gene_EXP:C11orf74 2_216109160_C_A,2_237751320_TAA_T,13_49377006_T_C,16_21520152_G_A,16_21533198_T_C
##blood Gene_EXP:C12orf49 21_29056427_GTAC_G
##blood Gene_EXP:C15orf26 17_999610_T_C
##blood Gene_EXP:C17orf85 19_54909178_GA_G,1_52789915_CT_C,2_15396385_GA_G,6_7595008_AT_A,9_100450496_GT_G
##blood Gene_EXP:CA2 1_156378043_T_A
##blood Gene_EXP:CABLES2 17_74794950_A_G
##blood Gene_EXP:CACNA2D4 2_42288248_A_G
##blood Gene_EXP:CAMK2D 2_100964113_G_A,2_100977729_C_T,11_45181661_C_T
##blood Gene_EXP:CARHSP1 13_24781827_GTT_GT,14_68477626_CT_C
##blood Gene_EXP:CBFB 3_112112876_TA_T,15_74183919_A_G
##blood Gene_EXP:CBX2 2_161993434_TA_T,12_109568919_GT_G
##blood Gene_EXP:CCDC136 9_131430074_C_T,19_11301321_TA_T
##blood Gene_EXP:CCND3 7_151221500_CT_C,14_68477626_CT_C
##blood Gene_EXP:CD151 11_828784_A_G,11_840477_A_G,11_840319_C_T,11_838110_C_T,11_837582_G_A
##blood Gene_EXP:CD44 8_132137720_G_A
##blood Gene_EXP:CD72 2_138288359_C_T
##blood Gene_EXP:CDCA7 20_46358679_C_G
##blood Gene_EXP:CDK6 9_33796705_C_G,9_33797971_T_A,9_33797993_G_A,9_33797994_C_T,9_33798019_A_G
##blood Gene_EXP:CDKN2B 5_113434330_T_G,5_113515266_G_A
##blood Gene_EXP:CDT1 1_109668049_G_T,1_109669334_C_T,6_111008018_CT_C
##blood Gene_EXP:CEP104 20_14326307_G_T
##blood Gene_EXP:CEP57L1 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T,9_33798019_A_G
##blood Gene_EXP:CEP85 1_109669334_C_T
##blood Gene_EXP:CFL2 13_42888471_G_A,16_20317363_T_C
##blood Gene_EXP:CFLAR 5_60605865_GA_G,7_28494789_G_T,9_130489245_A_T
##blood Gene_EXP:CHID1 1_53250744_G_A,1_85071819_T_A,15_78922969_A_C,15_78939184_A_AG
##blood Gene_EXP:CITED4 3_75338856_G_A
##blood Gene_EXP:CLEC11A 5_179863845_T_G,16_46710765_T_A
##blood Gene_EXP:CLIP1 7_1092820_C_T,7_1155657_T_TC,11_24976472_CTGTT_C
##blood Gene_EXP:CMBL 11_117203393_G_A
##blood Gene_EXP:CNTROB 13_97982483_AT_A,2_61498915_TA_T,3_37337179_CT_C,10_70860377_CT_C,5_64507681_TA_T
##blood Gene_EXP:COMT 8_143538172_T_C,8_143538914_T_G
##blood Gene_EXP:COPS8 11_69072603_C_T,11_124023539_A_G,11_124023038_C_T,16_57082546_T_C,16_57081660_C_T
##blood Gene_EXP:CRADD 8_123427934_A_G,8_123429947_A_G,8_123436496_A_G,8_123436564_T_A,8_123437226_C_T
##blood Gene_EXP:CRB3 15_98922244_C_T
##blood Gene_EXP:CRY1 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T,9_33798019_A_G,19_1057777_GA_G
##blood Gene_EXP:CSF3R 5_179863845_T_G,7_93426338_G_A,9_137986862_A_C,16_57081660_C_T,16_57082546_T_C
##blood Gene_EXP:CTSL1 1_16580833_G_T
##blood Gene_EXP:CXCL10 1_15726998_G_A,1_15729869_G_A
##blood Gene_EXP:DAD1 12_54182016_C_A
##blood Gene_EXP:DCTN4 X_3271895_G_A
##blood Gene_EXP:DDX60L 6_143772215_C_T
##blood Gene_EXP:DENND4A 7_151221500_CT_C,19_1057777_GA_G,19_51416180_GA_G
##blood Gene_EXP:DGAT1 3_38905381_A_T,3_38910262_T_C,11_18484005_G_A
##blood Gene_EXP:DGKZ 2_232380380_A_G,2_232380431_T_C
##blood Gene_EXP:DISC1 11_129905704_C_T,14_105588411_G_A
##blood Gene_EXP:DLC1 2_182063828_G_C,20_56366031_C_T
##blood Gene_EXP:DOCK5 5_32053643_T_C
##blood Gene_EXP:DOK2 2_23637298_G_A,2_23642306_G_A
##blood Gene_EXP:DPCD 15_42211755_GA_G
##blood Gene_EXP:DSTYK 3_53179641_T_C
##blood Gene_EXP:DTD1 2_15396385_GA_G,5_77411610_TA_T,10_113620724_G_A,11_63382198_CA_C
##blood Gene_EXP:DYSF 1_25390874_C_G,20_14326307_G_T
##blood Gene_EXP:EFEMP2 6_111008018_CTT_C,6_163478762_CT_C
##blood Gene_EXP:EGFR 1_16027940_A_T,1_16048568_C_G
##blood Gene_EXP:ELANE 19_52435206_A_G
##blood Gene_EXP:ELOVL5 13_37746457_TAA_TA
##blood Gene_EXP:EMILIN2 5_179863845_T_G
##blood Gene_EXP:EMP1 1_16580833_G_T
##blood Gene_EXP:ENG 3_186558604_C_T,22_29806785_G_C
##blood Gene_EXP:EPAS1 6_26390925_C_G
##blood Gene_EXP:EPB41 11_1758992_A_C
##blood Gene_EXP:ERMAP 10_111079134_C_A,4_25662622_G_A,2_160137837_C_T,2_182063828_G_C,2_160138253_A_G
##blood Gene_EXP:EWSR1 14_68477626_CT_C,17_39270861_TA_T
##blood Gene_EXP:FAM102A 20_10639738_A_G
##blood Gene_EXP:FAM111B 19_49044175_A_G
##blood Gene_EXP:FAM117A 7_114663436_A_AT,16_89586624_G_A
##blood Gene_EXP:FAM63A 15_22573256_T_G
##blood Gene_EXP:FAM83H 2_219489820_G_A,6_56701823_T_C
##blood Gene_EXP:FANCD2 5_161895646_GT_G
##blood Gene_EXP:FANCI 1_109669334_C_T,6_111008018_CT_C
##blood Gene_EXP:FBXO16 5_850655_C_T,10_97581428_A_G,22_30119060_T_C,17_60990260_A_G,14_61457374_G_T
##blood Gene_EXP:FBXO33 8_143538013_T_C
##blood Gene_EXP:FCGR2A 10_18500795_T_G
##blood Gene_EXP:FEM1C 1_15443607_G_A
##blood Gene_EXP:FHL3 11_65543121_A_C
##blood Gene_EXP:FKBP3 3_10301192_C_T,15_22715140_G_C
##blood Gene_EXP:FLRT3 17_8012602_G_A
##blood Gene_EXP:FLT3 2_110841381_C_T
##blood Gene_EXP:FOXK2 10_119676966_A_G
##blood Gene_EXP:FRAT2 1_215813880_T_C,1_215838019_T_C
##blood Gene_EXP:G0S2 5_35904512_G_T
##blood Gene_EXP:GAB2 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T
##blood Gene_EXP:GAB3 1_182884882_G_A
##blood Gene_EXP:GALNT7 19_14388545_T_A
##blood Gene_EXP:GATA2 2_182063828_G_C
##blood Gene_EXP:GBP1 12_10373045_A_G
##blood Gene_EXP:GLT25D1 5_135888024_G_T
##blood Gene_EXP:GLTPD1 2_68502860_A_G,8_7740651_A_C,10_43845335_G_GC
##blood Gene_EXP:GLUL 16_46710765_T_A
##blood Gene_EXP:GMPR 2_182063828_G_C
##blood Gene_EXP:GNA15 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T,9_33798019_A_G
##blood Gene_EXP:GNAQ 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T
##blood Gene_EXP:GPR18 2_1542589_G_T
##blood Gene_EXP:GRB10 7_51028450_A_G,12_56425138_C_T
##blood Gene_EXP:GSN 11_129905704_C_T
##blood Gene_EXP:GSR 22_19180296_A_C
##blood Gene_EXP:HADHB 10_43100403_G_T
##blood Gene_EXP:HBQ1 22_16433541_AC_A
##blood Gene_EXP:HEBP1 2_182063828_G_C
##blood Gene_EXP:HIBADH 18_35478354_GA_G
##blood Gene_EXP:HNRNPA0 7_20786651_GA_G,11_33353067_AT_A,20_34750522_TA_T,6_152444591_GA_G,15_42211755_GA_G
##blood Gene_EXP:HNRNPA0 7_20786651_GA_G,20_34750522_TA_T,15_42211755_GA_G,1_155914364_GA_G,11_33353067_AT_A
##blood Gene_EXP:HNRNPUL1 10_27250013_T_C
##blood Gene_EXP:HRH1 7_56078329_T_G,11_1758992_A_C
##blood Gene_EXP:HTRA3 2_113641902_C_T,22_50769003_G_A
##blood Gene_EXP:IFI30 14_77435415_G_GA
##blood Gene_EXP:IGF2BP2 1_39522547_C_T
##blood Gene_EXP:IMP4 10_133626801_G_T
##blood Gene_EXP:INTU 2_197497294_T_C,X_152638267_A_G
##blood Gene_EXP:ISG20 5_179863845_T_G
##blood Gene_EXP:ITGA6 9_111758806_C_T,12_6952191_A_C
##blood Gene_EXP:JAKMIP2 21_10605542_G_A
##blood Gene_EXP:JPH1 5_128345465_A_C,16_81858185_C_G
##blood Gene_EXP:JSRP1 15_22573256_T_G
##blood Gene_EXP:KAT7 16_16036657_C_A
##blood Gene_EXP:KATNB1 2_200412288_CT_C,19_9251064_CT_C,1_84490478_CT_C,4_8452742_GA_G,20_38562748_GT_G
##blood Gene_EXP:KCNJ11 7_5943381_A_G,7_6781419_T_C,20_63940064_AGG_A
##blood Gene_EXP:KCTD7 11_63646490_AAAAT_A,11_63719914_T_C,12_128669441_G_A
##blood Gene_EXP:KDELR1 17_62447686_C_T,19_57475779_A_C,X_49304797_C_G
##blood Gene_EXP:KDM1A 1_53923844_G_GT,1_53966346_G_A
##blood Gene_EXP:KDM3B 6_43052450_G_A,6_43054205_C_T,6_43055633_T_C,11_117776746_C_G
##blood Gene_EXP:KHDRBS1 19_11431113_CT_C
##blood Gene_EXP:KIAA1377 19_2896950_T_C
##blood Gene_EXP:KIF15 15_100152748_G_A
##blood Gene_EXP:KIF3B 11_1017789_A_C
##blood Gene_EXP:KLHL25 3_129433338_GT_G,6_43525297_GT_G,13_97982483_AT_A,6_70861991_TA_T,16_30280420_GA_G
##blood Gene_EXP:KRT10 2_97196659_G_A,7_92671549_C_T
##blood Gene_EXP:LAPTM4B 20_56366031_C_T
##blood Gene_EXP:LCK 1_220110770_GT_G,7_73465568_GA_G,2_161993434_TA_T,6_46668819_GT_G,5_64507681_TA_T
##blood Gene_EXP:LCK 7_73465568_GA_G,1_220110770_GT_G,2_161993434_TA_T,6_46668819_GT_G,5_64507681_TA_T
##blood Gene_EXP:LEF1 6_136108863_GA_G,11_63382198_CA_C,9_100450496_GT_G,1_151694350_CT_C,13_37746457_TAA_TA
##blood Gene_EXP:LEPRE1 1_205849911_C_T,1_205849976_G_A,4_68337362_T_C,4_182680440_G_C,4_182680513_G_A
##blood Gene_EXP:LEPROTL1 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T,9_33798019_A_G
##blood Gene_EXP:LGALS1 1_176043330_GA_G,2_113598783_G_A,20_13110086_AT_A
##blood Gene_EXP:LIMS2 6_72148713_GTT_G,11_63382198_CA_C,3_196805277_CT_C,13_24781827_GTT_GT,13_37746457_TAA_TA
##blood Gene_EXP:LMNA 12_120579461_C_T
##blood Gene_EXP:LPAR6 12_131908770_A_C,X_136033510_GA_G
##blood Gene_EXP:LPL 15_30372250_C_T
##blood Gene_EXP:LRG1 13_28073352_GA_G
##blood Gene_EXP:LRP3 1_165249397_C_G,9_77415913_G_T,3_75338856_G_A,6_159214911_T_G,7_81974555_G_GAA
##blood Gene_EXP:LRP3 9_77415913_G_T,1_165249397_C_G,3_75338856_G_A,6_159214911_T_G,7_81974555_G_GAA
##blood Gene_EXP:LRPAP1 7_36335190_G_A,22_39052745_T_C
##blood Gene_EXP:MANBAL 1_24074187_A_G
##blood Gene_EXP:MBLAC1 3_179365291_C_T
##blood Gene_EXP:MED30 2_214997659_G_A
##blood Gene_EXP:MEIG1 17_2334690_C_A
##blood Gene_EXP:MICALL2 2_182063828_G_C
##blood Gene_EXP:MIS18A 1_109669334_C_T
##blood Gene_EXP:MLF1IP 10_69097096_G_A
##blood Gene_EXP:MMP14 1_16580833_G_T
##blood Gene_EXP:MPP1 7_114663562_CT_C,9_33796659_C_T,9_33798019_A_G
##blood Gene_EXP:MRAS 11_1017789_A_C
##blood Gene_EXP:MS4A3 19_49135699_C_G
##blood Gene_EXP:MSI2 22_43972861_C_T
##blood Gene_EXP:MSL2 5_64507681_TA_T,7_73465568_GA_G,8_73582883_GA_G,13_37746457_TAA_TA,13_37746457_TA_T
##blood Gene_EXP:MTPAP 3_49714047_T_G
##blood Gene_EXP:MUL1 19_6454640_T_C
##blood Gene_EXP:MYL6B 11_284257_G_A
##blood Gene_EXP:MYO1F 10_18500795_T_G
##blood Gene_EXP:MYO5A 16_84661520_G_A
##blood Gene_EXP:N4BP2 5_146267624_CT_C,9_120989554_CT_C,13_37746457_TAA_TA,16_84087473_CAA_C,19_11301321_TA_T
##blood Gene_EXP:NAGS 5_176093676_A_T
##blood Gene_EXP:NASP 1_109669334_C_T
##blood Gene_EXP:NCOA3 3_54386725_A_G
##blood Gene_EXP:NFAM1 9_15848985_C_T
##blood Gene_EXP:NFE2 2_182063828_G_C
##blood Gene_EXP:NFKBIA 10_43616797_G_A
##blood Gene_EXP:NFYB 20_46358679_C_G
##blood Gene_EXP:NINL 11_33353067_AT_A,13_24781827_GTT_GT,13_37746457_TAA_TA,13_37746457_TA_T
##blood Gene_EXP:NME7 1_19700911_G_A
##blood Gene_EXP:NNT 10_73696978_G_A
##blood Gene_EXP:NOL4 1_26270944_G_A
##blood Gene_EXP:NRM 11_4082830_A_C
##blood Gene_EXP:NRN1 6_136108863_GA_G,12_66128874_G_A,20_24959128_C_T
##blood Gene_EXP:NSMAF 1_117088769_T_C
##blood Gene_EXP:NUDT2 2_25154307_T_C,14_94592125_A_C
##blood Gene_EXP:NUDT3 11_119054629_G_A
##blood Gene_EXP:NUP43 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T
##blood Gene_EXP:ORC1 1_109669334_C_T
##blood Gene_EXP:ORMDL3 2_178769706_G_T,19_49044101_A_G
##blood Gene_EXP:OSBPL11 10_122336520_T_C,10_122336546_A_C,17_4896602_C_T
##blood Gene_EXP:OSBPL5 2_232380431_T_C
##blood Gene_EXP:OSCAR 20_23444001_C_T
##blood Gene_EXP:P4HB 2_71427045_G_A
##blood Gene_EXP:PABPC4L 15_75266048_A_G
##blood Gene_EXP:PATZ1 17_39270861_TA_T
##blood Gene_EXP:PAWR 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T
##blood Gene_EXP:PCYOX1L 5_122946014_G_GT
##blood Gene_EXP:PDGFA 14_57481656_A_C
##blood Gene_EXP:PDIA5 2_43676215_T_C,11_18534402_T_C
##blood Gene_EXP:PDZD2 22_32238890_G_A
##blood Gene_EXP:PELI2 11_63382198_CA_C,13_37746457_TAA_TA,18_21530536_TA_T,6_152444591_GA_G,19_11301321_TA_T
##blood Gene_EXP:PELI2 13_37746457_TAA_TA,18_21530536_TA_T,19_11301321_TA_T,16_57460490_GA_G,2_53919250_GA_G
##blood Gene_EXP:PERP 6_167373419_T_C,8_100924055_G_A
##blood Gene_EXP:PHACTR2 5_146013801_C_T
##blood Gene_EXP:PIDD 19_7937889_G_A
##blood Gene_EXP:PIK3CB 2_42288248_A_G,5_16474706_T_G
##blood Gene_EXP:PIK3R3 2_53919250_GA_G
##blood Gene_EXP:PITPNM2 7_22308257_T_G,17_42729015_C_A
##blood Gene_EXP:PLA2G12A 1_70189288_A_C
##blood Gene_EXP:PLA2G16 11_71605554_A_C
##blood Gene_EXP:PLAGL1 7_93426338_G_A,11_118551711_A_G,14_104792556_A_G,16_28902389_G_T
##blood Gene_EXP:PLCB2 7_128805316_G_A
##blood Gene_EXP:PLEC 2_219488439_G_C,2_219489820_G_A,2_219496348_TC_T,2_219496868_T_TA
##blood Gene_EXP:PPIP5K2 2_178769706_G_T,11_129905704_C_T
##blood Gene_EXP:PPT1 11_85898919_C_T
##blood Gene_EXP:PRAM1 2_178769706_G_T,2_232380380_A_G,7_128805316_G_A
##blood Gene_EXP:PRCP 3_53179641_T_C
##blood Gene_EXP:PREP 22_32225632_C_T
##blood Gene_EXP:PRKAR2A 13_37746457_TAA_TA,18_74804139_CT_C,13_37746457_TA_T,7_73465568_GA_G,12_107746489_GT_G
##blood Gene_EXP:PRKCQ 9_33796659_C_T,9_33796705_C_G,9_33798019_A_G
##blood Gene_EXP:PRSS57 9_33796659_C_T
##blood Gene_EXP:PSTPIP2 2_182063828_G_C,6_143760631_C_A,6_143772215_C_T
##blood Gene_EXP:PTGFRN 5_126804830_T_C,5_126836282_C_T,11_1250937_C_T
##blood Gene_EXP:PTK7 2_202765379_CT_C
##blood Gene_EXP:PTPN12 14_99909370_C_T
##blood Gene_EXP:PTPRN2 2_106424833_G_C
##blood Gene_EXP:PVRL2 17_999610_T_C
##blood Gene_EXP:RAB31 3_75338856_G_A
##blood Gene_EXP:RAB39B 8_2102806_A_G
##blood Gene_EXP:RAB9B 5_133070239_CT_C,11_63382198_CA_C,10_67956845_TA_T,13_37746457_TAA_TA,18_21530536_TA_T
##blood Gene_EXP:RABGAP1 3_10260372_A_G,17_20204460_T_C,17_20205876_C_T,17_20357788_A_G
##blood Gene_EXP:RABGAP1L 10_93057060_T_C,10_93064409_G_A
##blood Gene_EXP:RAD54L 1_109669334_C_T
##blood Gene_EXP:RAG1 4_105719027_C_A,19_11301321_TA_T
##blood Gene_EXP:RAG2 3_112112876_TA_T,12_21806064_CA_C,19_11301321_TA_T
##blood Gene_EXP:RALGPS1 7_100098747_C_G
##blood Gene_EXP:RBM10 6_163478762_CT_C,7_77937691_AT_A,8_108228149_GA_G
##blood Gene_EXP:RBM15B 5_75576972_GA_G,8_73582883_GA_G,10_67956845_TA_T,11_63382198_CA_C
##blood Gene_EXP:RBM18 10_131944182_G_C
##blood Gene_EXP:REPS2 1_32780201_C_G,1_32817174_C_A,16_67140459_A_G,16_67146210_G_C
##blood Gene_EXP:RFX3 7_67238251_A_AT
##blood Gene_EXP:RHPN2 12_57456154_A_C
##blood Gene_EXP:RIPK2 11_63382198_CA_C,6_152444591_GA_G,5_75576972_GA_G,10_67956845_TA_T,5_64507681_TA_T
##blood Gene_EXP:RIPK2 11_63382198_CA_C,6_152444591_GA_G,5_75576972_GA_G,10_67956845_TA_T,9_120989554_CT_C
##blood Gene_EXP:RIPK2 6_152444591_GA_G,5_75576972_GA_G,5_64507681_TA_T,10_67956845_TA_T,9_120989554_CT_C
##blood Gene_EXP:RNF13 10_69097096_G_A
##blood Gene_EXP:RNF169 6_119180436_T_TAA
##blood Gene_EXP:RNF24 5_179863845_T_G
##blood Gene_EXP:RNF38 14_94038937_C_G
##blood Gene_EXP:ROPN1L 2_200876848_T_C,16_33978977_C_T
##blood Gene_EXP:ROR2 15_41184658_C_CTT
##blood Gene_EXP:RRAGA 1_32091885_A_G,7_128815862_G_A,14_24233583_C_T
##blood Gene_EXP:RUNX1 9_33796659_C_T,9_33796705_C_G
##blood Gene_EXP:S100A6 12_125519394_A_T
##blood Gene_EXP:S100A8 12_11091570_G_A
##blood Gene_EXP:S1PR2 1_204261453_G_A,3_54386725_A_G
##blood Gene_EXP:SDC4 1_24074187_A_G
##blood Gene_EXP:SEC61G 19_2073455_A_C
##blood Gene_EXP:SEMA4B 22_19180296_A_C
##blood Gene_EXP:SEPHS1 2_232087433_CT_C
##blood Gene_EXP:SGCA 6_73823468_G_T
##blood Gene_EXP:SGCE 5_149320388_T_C,10_46549870_A_G,10_46550021_C_T,10_46550133_C_A,10_46550822_T_C
##blood Gene_EXP:SGPP1 1_153645034_CT_C
##blood Gene_EXP:SGSM2 2_63842143_GA_G,4_84631729_G_T,7_77256452_A_G,13_97982483_AT_A,16_84054421_T_C
##blood Gene_EXP:SH2B3 6_167373419_T_C
##blood Gene_EXP:SKA3 6_163478762_CT_C
##blood Gene_EXP:SLAMF7 19_48498343_A_G
##blood Gene_EXP:SLC25A29 5_70067144_CA_C,7_28494775_GT_G,11_63382198_CA_C,12_25215659_AT_A,21_32744756_GA_G
##blood Gene_EXP:SLC25A37 2_182063828_G_C
##blood Gene_EXP:SLC30A4 3_39068885_T_TA,3_39078124_T_C,22_39032391_C_G
##blood Gene_EXP:SLC38A1 7_114653804_G_T
##blood Gene_EXP:SLC38A5 9_34257981_C_T,22_38962032_A_C,10_104299143_G_T,10_11525272_G_A,10_11852222_GAC_G
##blood Gene_EXP:SLC4A7 10_128102802_C_A
##blood Gene_EXP:SLFN11 1_215675245_T_C
##blood Gene_EXP:SLFN5 2_17592257_G_A,4_186199057_C_A,6_116125413_A_G
##blood Gene_EXP:SMARCE1 6_38951533_A_G
##blood Gene_EXP:SMYD2 6_26443625_C_A
##blood Gene_EXP:SNRNP48 8_108228149_GA_G,13_37746457_TAA_TA,18_21530536_TA_T,16_57460490_GA_G,15_50725184_GT_G
##blood Gene_EXP:SNRPG 7_12377736_T_C
##blood Gene_EXP:SNX29 3_54386725_A_G
##blood Gene_EXP:SOCS1 13_24501721_C_T
##blood Gene_EXP:SOX4 6_152444591_GA_G,13_37746457_TAA_TA,17_39270861_TA_T
##blood Gene_EXP:SPNS3 9_33796705_C_G
##blood Gene_EXP:SPTAN1 21_36253713_C_T
##blood Gene_EXP:SSR3 8_26634739_T_G,16_23445257_T_C
##blood Gene_EXP:STMN1 1_109668049_G_T,1_109669334_C_T
##blood Gene_EXP:STOX1 9_67192757_GA_G
##blood Gene_EXP:SURF4 14_101856659_C_G
##blood Gene_EXP:SYNGR1 1_149055998_GA_G,19_52434956_A_G
##blood Gene_EXP:TAF3 1_75148689_A_T
##blood Gene_EXP:TATDN3 2_87757451_T_TAA
##blood Gene_EXP:TEAD3 3_15432008_G_A,3_15434504_C_G
##blood Gene_EXP:THEM4 2_53919250_GA_G,13_37746457_TAA_TA,18_74804139_CT_C,1_108982799_TA_T,1_74576942_TA_T
##blood Gene_EXP:TMEM150A 10_88602550_CT_C
##blood Gene_EXP:TMEM173 1_201199371_G_A,1_201200426_T_G
##blood Gene_EXP:TMEM52 1_129285_G_A,1_46286376_A_G,10_119136515_G_A,13_33063792_T_G
##blood Gene_EXP:TMEM87B 9_39118208_G_T,9_41938349_G_T,9_61081995_G_T,X_141906251_C_A
##blood Gene_EXP:TMEM97 2_113939939_A_G
##blood Gene_EXP:TMPRSS15 21_39898596_C_A
##blood Gene_EXP:TNFRSF12A 13_98826885_T_C,19_39902109_T_G
##blood Gene_EXP:TNFRSF1A 6_71969190_A_G,15_34381982_T_C,15_34528203_T_C,16_46710765_T_A
##blood Gene_EXP:TNS3 12_6856900_T_C,19_14388545_T_A
##blood Gene_EXP:TOM1L1 5_32053643_T_C,11_117136643_A_G,11_117207940_T_C
##blood Gene_EXP:TRIM26 11_129905704_C_T
##blood Gene_EXP:TSPO 19_53224139_T_C
##blood Gene_EXP:TSPYL2 2_42288248_A_G,11_33881066_C_A
##blood Gene_EXP:TTC17 10_43164088_C_T,11_18534354_C_G
##blood Gene_EXP:TTF1 8_28850105_GA_G,11_63382198_CA_C,6_152444591_GA_G,7_73465568_GA_G,13_37746457_TAA_TA
##blood Gene_EXP:TTF1 8_28850105_GA_G,12_48679260_CA_C,11_63382198_CA_C,6_152444591_GA_G,13_37746457_TAA_TA
##blood Gene_EXP:TXLNB 20_56366031_C_T
##blood Gene_EXP:TYMS 9_5557708_T_C
##blood Gene_EXP:UBA52 6_135037778_G_A
##blood Gene_EXP:UBASH3B 14_68477626_CT_C
##blood Gene_EXP:UBE2H 9_33798075_C_T,9_33798077_T_C,9_33799000_T_C
##blood Gene_EXP:UPK1B 15_75266055_T_G
##blood Gene_EXP:USF1 1_225419673_GA_G,9_120989554_CT_C,20_34750522_TA_T,6_99369823_GA_G,17_46332538_GT_G
##blood Gene_EXP:USP49 7_147638841_CT_C
##blood Gene_EXP:VPS37C 3_160416453_CT_C,5_146267624_CT_C,12_15623289_TA_T,13_37746457_TA_T
##blood Gene_EXP:VWA5A 9_98229148_C_A,X_30236259_T_C,X_30242885_A_G,X_30243041_G_C
##blood Gene_EXP:WT1 9_33796659_C_T,9_33796705_C_G,9_33798019_A_G
##blood Gene_EXP:YES1 1_16580833_G_T
##blood Gene_EXP:YIPF5 18_63655761_T_C
##blood Gene_EXP:ZADH2 4_86769845_A_G
##blood Gene_EXP:ZBED4 7_100590017_T_G,17_39270861_TA_T,22_23698377_AT_A
##blood Gene_EXP:ZBTB44 16_8916969_TA_T
##blood Gene_EXP:ZBTB8OS 10_63177655_C_T,10_63217126_T_G,11_118198037_T_C,19_54632388_T_A,19_54632531_T_C
##blood Gene_EXP:ZC4H2 1_225419673_GA_G,9_120989554_CT_C,13_24781827_GTT_GT,13_37746457_TAA_TA,19_1057777_GA_G
##blood Gene_EXP:ZDHHC20 11_47588455_A_C,21_38451144_T_G
##blood Gene_EXP:ZDHHC23 10_115315580_T_G
##blood Gene_EXP:ZMYND11 2_100964113_G_A
##blood Gene_EXP:ZNF22 2_97507111_G_A
##blood Gene_EXP:ZNF223 8_7564464_G_A
##blood Gene_EXP:ZNF367 12_48679260_CA_C
##blood Gene_EXP:ZNF415 1_225147359_GT_G,19_1057777_GA_G
##blood Gene_EXP:ZNF445 9_33796659_C_T
##blood Gene_EXP:ZNF566 12_84892141_T_TA
##blood Gene_EXP:ZNF84 22_46326503_T_C,22_46328661_T_C
##blood Gene_EXP:ZYX 11_129905704_C_T
[표 2]에 제시된 FRH 들이 해당 유전자(gene) 발현과의 상관도(P-value)를 산출한 결과가 아래 [표 3]에 정리되어있다.
또한, [표 2]에 제시된 FRH들이 포함되어 발현된 유전자와 각각의 blood(혈액암) 약물과의 상관도(P-value)를 산출한 결과가 도 25에 도시되어 있다.
Correlation between gene expression and FRH
Gene pvalue(FRH-Gene_exp) Gene pvalue(FRH-Gene_exp) Gene pvalue(FRH-Gene_exp)
CDT1 2.24E-11 DENND4A 1.50E-05 WRAP73 0.000115123
MYB 2.44E-11 SLC38A1 1.51E-05 PTGER4 0.000115506
CCND3 5.21E-10 SEC11C 1.52E-05 ELK4 0.000115691
PREPL 7.23E-10 ZNF256 1.55E-05 MVP 0.00011611
NUCB2 7.97E-10 KIF3C 1.55E-05 NEURL1B 0.000116508
UBE2Q2 9.98E-10 PRKAR2A 1.60E-05 IFIH1 0.000116942
RUNX1 1.07E-09 ZNF646 1.60E-05 SP100 0.000118334
H2AFY 2.75E-09 MCL1 1.61E-05 MGLL 0.000119368
PTPLA 3.51E-09 TMEM38A 1.62E-05 PRSS57 0.000120273
GLUL 3.60E-09 ZNF35 1.65E-05 TGFBR2 0.000120393
SLC25A29 7.76E-09 RBMX 1.69E-05 MAP2K1 0.000121231
VAV3 9.36E-09 KANSL3 1.72E-05 ARHGDIB 0.000123184
SNX25 1.57E-08 LAIR1 1.79E-05 SMPD1 0.000123341
ALYREF 1.62E-08 POLR2M 1.82E-05 PCNA 0.00012346
RAD54L 1.72E-08 TFEB 1.83E-05 TAOK2 0.000123929
CARHSP1 1.80E-08 S1PR3 1.83E-05 ST3GAL4 0.000125195
TCF7L2 2.52E-08 DDR2 1.86E-05 CHEK1 0.000126423
RNF32 2.60E-08 SGCE 1.89E-05 FBXO5 0.00012702
UBASH3B 2.75E-08 CCDC64B 2.01E-05 NFE2L3 0.00012708
UBE2H 2.95E-08 NUDCD3 2.02E-05 KIF21A 0.000127235
OSGEP 2.96E-08 TMEM140 2.04E-05 HMGB3 0.000127631
C19orf77 3.86E-08 C9orf3 2.05E-05 KCNAB1 0.000128089
PHC2 3.89E-08 ZNF833P 2.06E-05 ZNF569 0.000129369
WT1 4.04E-08 PCIF1 2.07E-05 DGAT1 0.000129727
HAUS1 4.17E-08 IGLL1 2.12E-05 PNPLA4 0.000129867
SLC25A12 4.53E-08 ITSN2 2.13E-05 FN3KRP 0.000130689
DAPP1 4.97E-08 C1orf56 2.14E-05 TUBA4A 0.000130725
SCYL3 5.09E-08 KIF20A 2.16E-05 BUD13 0.000130762
STK4 5.19E-08 EHMT2 2.18E-05 ARHGAP11A 0.000131047
TSC22D1 5.26E-08 SYNGR3 2.22E-05 LMO3 0.000131418
TOP2B 5.76E-08 ZNF74 2.23E-05 CRY1 0.000131553
SPOPL 5.85E-08 UNK 2.26E-05 ZNRD1 0.000131923
MAZ 5.89E-08 SENP2 2.27E-05 OR8B4 0.000132203
ATOX1 6.14E-08 IFITM2 2.28E-05 MEX3D 0.000132767
ZNF629 6.72E-08 B4GALT3 2.28E-05 GCAT 0.000133105
HECW2 6.91E-08 STMN3 2.30E-05 C11orf24 0.000134285
KDM1A 8.64E-08 SPRY2 2.37E-05 FZD2 0.000134912
ISM1 9.26E-08 HLA-DPA1 2.38E-05 MGAT4A 0.000134952
NUP43 9.90E-08 ATP6V1A 2.38E-05 TXNDC15 0.000135053
ETS2 1.06E-07 CFLAR 2.39E-05 TBP 0.000135496
RECQL4 1.09E-07 OAS1 2.39E-05 TNIP1 0.000136722
RNF13 1.19E-07 MINA 2.41E-05 LIPC 0.000136982
MPP1 1.25E-07 WNT10A 2.41E-05 PARK7 0.000137199
PRKCQ 1.36E-07 FAM50A 2.43E-05 ADAR 0.000137944
RNASEH2B 1.36E-07 MTX2 2.45E-05 DNASE2 0.000141611
PHF10 1.41E-07 RHBDF2 2.45E-05 ZBTB42 0.000142063
RPL41 1.42E-07 TSG101 2.47E-05 ZCCHC6 0.00014212
IFI30 1.43E-07 EFCAB2 2.48E-05 KIAA1967 0.000142316
IDH2 1.44E-07 NRIP1 2.51E-05 GLMN 0.000142965
ASH2L 1.58E-07 DDX20 2.58E-05 ZC4H2 0.000143482
DCLRE1B 1.63E-07 MAP3K8 2.64E-05 PAN3 0.000143522
BRD3 1.69E-07 MRPL18 2.64E-05 MMS22L 0.000143694
PFKM 1.81E-07 TP63 2.66E-05 FRAT2 0.000144348
GFI1 1.93E-07 KIAA0226 2.68E-05 VSIG10 0.000145524
PATZ1 2.26E-07 IRF5 2.73E-05 FCGRT 0.000147028
RASGRP3 2.28E-07 HNRNPF 2.75E-05 SGMS1 0.000147633
KATNB1 2.37E-07 SEC61G 2.76E-05 SPATA24 0.000148628
CENPQ 2.37E-07 ITGA5 2.76E-05 SNRNP48 0.000149135
TBCD 2.38E-07 ZNF689 2.78E-05 ITGB7 0.000149254
SKA3 2.39E-07 MSL2 2.78E-05 ZNF22 0.000153719
CLEC11A 2.50E-07 SPIN1 2.79E-05 FCGR2B 0.000153896
TMEM168 2.53E-07 C20orf194 2.79E-05 C6orf1 0.000155625
TANK 2.56E-07 TROVE2 2.83E-05 NUPL2 0.000157222
JARID2 2.72E-07 ATG4A 2.84E-05 NBEAL1 0.000157544
IGFBP2 2.81E-07 FANCI 2.85E-05 KCNA4 0.000158213
FADS2 2.82E-07 SPINK13 2.86E-05 HMGXB4 0.000159072
UBE2Z 2.87E-07 CHAF1A 2.96E-05 NKAP 0.000159503
OSBPL5 2.89E-07 PKMYT1 3.02E-05 CEND1 0.00016015
NAMPT 2.93E-07 HIRIP3 3.02E-05 ACSL1 0.000161613
POLD1 2.98E-07 RNASEH2A 3.03E-05 XPR1 0.000162755
IDS 3.40E-07 INCENP 3.08E-05 WBSCR22 0.000162853
MCM10 3.41E-07 EHD4 3.08E-05 ZNF470 0.000163123
UBAC2 3.46E-07 DOK5 3.10E-05 DCAF8 0.000164168
CDCA7 3.51E-07 TAPBP 3.12E-05 POR 0.000166118
LIG1 3.51E-07 APEX1 3.14E-05 GCNT2 0.000166383
RANBP9 3.66E-07 C16orf54 3.22E-05 BLM 0.000167754
RAD51 3.68E-07 ZMIZ2 3.22E-05 SLC24A1 0.000168344
ZNF792 3.93E-07 TRPC4AP 3.24E-05 ADAM19 0.000171567
CAPRIN1 4.03E-07 ELL2 3.26E-05 MDFI 0.00017231
GNPDA2 4.68E-07 C20orf112 3.26E-05 CNDP2 0.000172977
STMN1 4.78E-07 PAWR 3.28E-05 VRK1 0.000174187
NT5C3 4.85E-07 ASNS 3.30E-05 CHST11 0.000174193
NUP85 5.06E-07 FOXRED2 3.30E-05 AACS 0.000175647
MFN1 5.15E-07 FAM69B 3.34E-05 CDC6 0.000176833
NASP 5.31E-07 ZDHHC18 3.48E-05 RUFY1 0.000178547
RHOQ 5.50E-07 HIPK1 3.48E-05 SHARPIN 0.00018061
ZNF184 5.78E-07 METTL15 3.52E-05 LRP10 0.000181626
SBDS 5.82E-07 FLAD1 3.54E-05 NR6A1 0.000182065
ZNF250 5.93E-07 MED13L 3.54E-05 RAG2 0.000182484
AEBP1 5.95E-07 TRIM24 3.55E-05 ZNF469 0.000183243
DGCR8 6.16E-07 CCDC110 3.55E-05 SLC9A7 0.000183326
CYTIP 6.39E-07 USP1 3.59E-05 CEBPE 0.000183435
MYO1C 6.57E-07 LGALS14 3.62E-05 CDK6 0.000184923
TNFRSF10A 6.93E-07 OGDH 3.63E-05 FAM69A 0.000186654
FAM102B 7.09E-07 SAMHD1 3.64E-05 HMGB1 0.0001874
ALG13 7.85E-07 FAM135A 3.67E-05 SEC62 0.000188793
GNA15 7.90E-07 CMTM3 3.68E-05 SETD6 0.000188956
TGIF1 8.24E-07 STK25 3.68E-05 MACC1 0.000190661
ATP6V0A1 8.54E-07 HIVEP1 3.75E-05 LILRB1 0.00019221
CPEB4 8.61E-07 LPAR6 3.75E-05 NANP 0.000192436
PIK3C2A 8.67E-07 PPCDC 3.76E-05 STYXL1 0.000192965
MLF1IP 8.94E-07 KCNN3 3.78E-05 MTA2 0.000192996
SLC25A4 9.08E-07 MRPL36 3.80E-05 RHPN1 0.000193971
NFKBIE 9.17E-07 LEPROTL1 3.82E-05 SERPINA9 0.000195369
SLC41A2 9.65E-07 TARS2 3.85E-05 SASS6 0.000195868
SOX4 1.13E-06 SYNGR2 3.85E-05 RCL1 0.000195962
GMFG 1.19E-06 FSTL1 3.87E-05 PARVG 0.000195977
PLXND1 1.19E-06 SEPHS1 3.88E-05 ATXN7L1 0.000200232
RCOR1 1.22E-06 FBXL19 3.92E-05 BASP1 0.000200326
ILDR1 1.29E-06 CCSAP 3.96E-05 DUSP6 0.000201438
PPP4R1 1.29E-06 WASF1 3.98E-05 CENPC1 0.000201563
THEM4 1.38E-06 CASP8AP2 3.98E-05 SCD5 0.000202694
PELI1 1.42E-06 CTBP2 4.00E-05 S1PR2 0.000203139
CTSZ 1.46E-06 SLMAP 4.09E-05 PRIM2 0.000203384
MBTPS2 1.46E-06 DUSP22 4.09E-05 SSU72 0.000203498
EWSR1 1.47E-06 PSEN2 4.20E-05 STX12 0.000203691
SNRPA 1.51E-06 NKD2 4.21E-05 ZFP161 0.000205341
CNTROB 1.53E-06 CNOT4 4.30E-05 KIF3B 0.000205553
CBLN3 1.55E-06 NMRK1 4.32E-05 SRSF6 0.000205578
ICAM1 1.56E-06 CYTH2 4.38E-05 ARHGAP24 0.000208463
IFT122 1.61E-06 NDUFB5 4.38E-05 WHSC1L1 0.000209197
ZBED4 1.63E-06 P4HTM 4.41E-05 HCCS 0.000209644
CDC45 1.66E-06 SCAF8 4.44E-05 TRAF3IP2 0.000211478
KCNK6 1.69E-06 NFS1 4.45E-05 MKNK2 0.000212936
FAM126A 1.74E-06 CHTF18 4.46E-05 MRPS14 0.000215752
C1GALT1C1 1.75E-06 ERMN 4.52E-05 SLC26A2 0.000218439
POC1A 1.79E-06 LRFN4 4.63E-05 KPNA4 0.000219219
TUBGCP3 1.83E-06 UNG 4.66E-05 FAM117B 0.000220464
SCCPDH 1.94E-06 IL21R 4.69E-05 FAM167A 0.000221601
ABL1 2.04E-06 RNF169 4.78E-05 IVNS1ABP 0.000222418
MEX3B 2.06E-06 TCTN1 4.80E-05 TRADD 0.000223089
MRPL32 2.11E-06 APBA3 4.81E-05 MGST2 0.000224188
RNF138 2.13E-06 GINS4 4.82E-05 ZNF431 0.000224682
KMO 2.15E-06 MANBAL 4.85E-05 CCNJ 0.000225117
PMVK 2.15E-06 COPS3 4.93E-05 C7orf13 0.000225587
SV2A 2.18E-06 B3GNTL1 4.93E-05 KDM3B 0.000226832
POLE 2.18E-06 BTBD3 4.97E-05 ZSWIM7 0.000227768
AZI1 2.20E-06 MAPK1 5.01E-05 SSR3 0.000228274
CD86 2.21E-06 COA6 5.06E-05 NLRP7 0.000233295
MAPK14 2.23E-06 METTL17 5.07E-05 ZNF146 0.000235932
MCM3 2.28E-06 TLR10 5.11E-05 KIFC1 0.000238208
ESD 2.51E-06 ZNF8 5.16E-05 TIGD5 0.000238343
BAHCC1 2.53E-06 ELOVL5 5.24E-05 MAN1A1 0.000241281
ARHGEF6 2.56E-06 SHANK3 5.25E-05 ZBTB8OS 0.000243537
AFTPH 2.56E-06 C4orf51 5.26E-05 ODF3B 0.000244509
SLFN11 2.59E-06 FAM108B1 5.28E-05 WDR17 0.000244958
ZNF599 2.61E-06 RNF130 5.30E-05 ZNF791 0.000247285
ZNF784 2.65E-06 ATAD5 5.39E-05 FOXK2 0.000248927
DDAH2 2.71E-06 H2AFX 5.44E-05 ZBTB45 0.000249672
BIRC3 2.74E-06 SRP72 5.44E-05 CHCHD10 0.0002508
ETV3 2.90E-06 WT1-AS 5.46E-05 MPP6 0.000250805
KIAA0101 3.00E-06 KIF15 5.55E-05 HOXB7 0.000252206
ATAD2 3.07E-06 CCNE2 5.61E-05 IFNGR2 0.000252921
ZBTB38 3.12E-06 BPNT1 5.64E-05 BAG6 0.000257524
HNRNPA0 3.16E-06 LMNB1 5.66E-05 PUF60 0.000259229
CD274 3.24E-06 IFT88 5.70E-05 UBE2Q1 0.000259259
CNOT6 3.36E-06 RAB36 5.81E-05 AKT1S1 0.000259587
PHF7 3.67E-06 GBA2 5.85E-05 TNRC6C 0.000260508
HLA-DMB 3.68E-06 LYPLAL1 5.86E-05 ZNF428 0.000260664
VAT1 3.76E-06 LCP2 5.88E-05 ZBTB32 0.000261656
MRPS33 3.89E-06 CEP85 5.90E-05 SQSTM1 0.000261872
CNOT8 3.94E-06 NUAK2 5.95E-05 ZNF32 0.000262217
REM2 4.02E-06 RREB1 5.95E-05 ADSL 0.000262672
VOPP1 4.10E-06 TNFRSF13B 5.97E-05 SMARCE1 0.000263249
CENPB 4.23E-06 TTC12 5.98E-05 GARS 0.000264164
FPGS 4.32E-06 HLA-DOB 5.99E-05 GIN1 0.000264788
RELB 4.46E-06 ACBD4 6.07E-05 EBI3 0.000265758
RUVBL2 4.54E-06 SEL1L 6.08E-05 MKS1 0.000267062
POLDIP3 4.60E-06 TNFRSF10B 6.08E-05 GABARAPL2 0.000269298
NCOA3 4.61E-06 PPIH 6.09E-05 FCRLB 0.00026953
RAD51AP1 4.83E-06 RUNX3 6.10E-05 CYBA 0.000270356
RAD50 4.93E-06 BAIAP2L1 6.12E-05 TAX1BP1 0.000271579
CAMSAP2 4.98E-06 CDC7 6.17E-05 C1orf228 0.000272967
IGF1 5.06E-06 SH2B2 6.23E-05 OR10A4 0.000274609
CCDC14 5.11E-06 ZBP1 6.25E-05 OAS2 0.000276321
SLAMF7 5.11E-06 PLAUR 6.27E-05 DTL 0.000278068
TRIM28 5.12E-06 PTOV1 6.28E-05 TTLL1 0.000278962
SLC26A11 5.12E-06 MATK 6.30E-05 NOC3L 0.000279403
PELI2 5.13E-06 LEPRE1 6.33E-05 C16orf80 0.000280058
RFC5 5.24E-06 SPNS3 6.35E-05 EVC 0.000281524
NRM 5.32E-06 NUP160 6.43E-05 DNMT3B 0.000283535
TMEM5 5.33E-06 UGGT2 6.43E-05 TTC37 0.000283545
MCCC2 5.33E-06 RRNAD1 6.43E-05 ZNF304 0.000283609
MCM6 5.37E-06 KLHL18 6.47E-05 UBLCP1 0.000284509
ACTN1 5.40E-06 NOG 6.47E-05 NFKBIA 0.000285765
MAGEC1 5.41E-06 GAB2 6.50E-05 ZNF77 0.000287023
MIS18A 5.42E-06 CEP57L1 6.53E-05 SLC2A8 0.000287583
ACBD3 5.47E-06 IRF4 6.54E-05 ACIN1 0.000287686
ORC1 5.56E-06 CBX6 6.57E-05 ZAP70 0.000289508
DNAJC10 5.69E-06 LUZP1 6.62E-05 CDC20 0.000289907
CYLD 5.78E-06 GLTSCR2 6.78E-05 CIITA 0.000292068
ITM2B 6.14E-06 NIPSNAP3A 6.79E-05 ZFYVE28 0.000294965
UNC13C 6.23E-06 PTK7 6.84E-05 MCEE 0.000294965
GINS1 6.24E-06 MTF2 6.88E-05 CCBL2 0.000295541
ATAT1 6.27E-06 C3orf52 6.89E-05 EGFL7 0.000295762
KIF22 6.27E-06 PLCXD1 6.98E-05 RPTOR 0.000296802
AIM2 6.34E-06 PRIM1 7.03E-05 YKT6 0.000297043
LDOC1L 6.35E-06 HDAC2 7.03E-05 MED10 0.000297618
DHX36 6.47E-06 GADD45B 7.04E-05 YIPF4 0.000298798
HERPUD1 6.50E-06 VPS26B 7.09E-05 ECE1 0.000300247
PTGES3L-AARSD1 6.52E-06 TOX 7.12E-05 SEC14L1 0.00030148
ISG20 6.65E-06 HIST1H4C 7.17E-05 DPY19L4 0.000301874
CTSS 6.76E-06 SMUG1 7.17E-05 SERPINI1 0.000306367
CXXC4 6.76E-06 MAML1 7.19E-05 BUB3 0.000307406
OST4 6.77E-06 MAD2L2 7.24E-05 RALBP1 0.00030814
FADS1 6.80E-06 ZNF219 7.28E-05 SUMO3 0.000308982
DNM1 6.86E-06 SRRT 7.29E-05 SKAP2 0.000310288
SLC25A44 7.10E-06 TUBA1B 7.32E-05 NPC1L1 0.000310435
TYMS 7.37E-06 CPXM1 7.34E-05 PRMT2 0.000310513
TXNDC11 7.45E-06 RILP 7.44E-05 ATP11A 0.000311389
SP140 7.52E-06 ZNF69 7.57E-05 HLA-DRA 0.000311878
PEA15 7.67E-06 AURKAIP1 7.68E-05 NOD1 0.000312979
HNRNPUL1 7.69E-06 PARP2 7.69E-05 KLHDC3 0.000313518
THAP6 8.32E-06 DNM2 7.78E-05 ADH1A 0.000314539
BRIP1 8.46E-06 CDC42SE1 7.78E-05 POLE2 0.000316263
MIOS 8.58E-06 ACVR2A 7.79E-05 KCNQ1 0.00031951
SYAP1 8.63E-06 TUBB 7.79E-05 SPIN4 0.000322002
BRD1 8.88E-06 FYB 7.80E-05 BST2 0.000324476
RAP2C 9.02E-06 NRXN1 7.96E-05 ZNF616 0.000324868
ZDBF2 9.02E-06 TAS2R8 7.98E-05 TRIM13 0.000325141
PSRC1 9.06E-06 GTPBP10 8.17E-05 RBM15B 0.000325377
EIF2C4 9.07E-06 ZWINT 8.23E-05 MAP4K1 0.00032544
DBN1 9.11E-06 DMD 8.31E-05 DPH3 0.000326699
TNFRSF1A 9.25E-06 FRAT1 8.32E-05 MRPL33 0.000328039
NMRAL1 9.30E-06 ZMYM1 8.35E-05 SLC25A32 0.000328338
SPATS2 9.42E-06 MAP4K4 8.43E-05 PPP6R1 0.000328581
ZNRF1 9.56E-06 MTPN 8.44E-05 HEY1 0.000332424
STK33 9.64E-06 ARHGAP19 8.54E-05 CNR1 0.000333937
ZNF627 9.73E-06 PAPPA2 8.58E-05 RHOBTB2 0.000337846
CALCRL 9.82E-06 DDX60L 8.63E-05 CASKIN2 0.000342224
PCYT1A 9.85E-06 WDFY2 8.63E-05 MUL1 0.000342995
MRPL40 9.98E-06 AKIRIN2 8.66E-05 NFAT5 0.000344167
KAT7 1.01E-05 REPS1 8.68E-05 WDHD1 0.000348001
C12orf60 1.02E-05 UBR7 8.73E-05 ORMDL2 0.000348388
AIFM2 1.04E-05 TIPARP 8.73E-05 SPHK1 0.000350761
SMARCD2 1.06E-05 DCAF6 8.79E-05 SF3A3 0.000350835
ANKIB1 1.06E-05 ZNF566 8.88E-05 TTLL7 0.000351437
DTD1 1.08E-05 ZNF367 9.02E-05 CASC5 0.000352269
DNAJB2 1.08E-05 RTN4R 9.12E-05 IRX5 0.000352846
ZNF230 1.11E-05 RNF24 9.15E-05 C10orf25 0.000353021
LRRC16A 1.13E-05 CMIP 9.17E-05 CDKN2B 0.000355938
SGSH 1.13E-05 CCR10 9.24E-05 TMEM62 0.00035702
DIAPH1 1.14E-05 SNX29 9.28E-05 ERCC5 0.0003614
EML4 1.15E-05 C17orf85 9.35E-05 FAAH2 0.000363537
TSC22D3 1.15E-05 COMMD1 9.36E-05 OR10H2 0.000363576
HYI 1.16E-05 ZNF512B 9.41E-05 TRAF4 0.000363601
PPP1R2 1.16E-05 HP1BP3 9.46E-05 SLC20A2 0.000364092
DUSP5 1.16E-05 STEAP1 9.51E-05 AKAP13 0.000365223
FAM98A 1.17E-05 ZNF606 9.53E-05 CDK2 0.000365579
SCIN 1.18E-05 XPC 9.58E-05 FBXO34 0.000366966
KCNA2 1.19E-05 TONSL 9.64E-05 P2RX1 0.000367307
CELF5 1.20E-05 WDR5 9.74E-05 CCNY 0.000368265
TEX9 1.20E-05 C12orf5 9.82E-05 CCRL2 0.000368709
ZNF114 1.20E-05 CEP70 9.89E-05 PORCN 0.000370299
TOMM7 1.20E-05 PRR3 9.96E-05 KIT 0.000371032
PAFAH1B3 1.23E-05 SFXN3 0.0001 INHBE 0.000372554
MED12 1.24E-05 CTDSPL 0.0001 ZNF626 0.000373433
CD48 1.28E-05 HNRNPA3 0.0001 GATAD1 0.000374764
GNAQ 1.28E-05 GPATCH1 0.0001 PSMB4 0.000375032
PPFIBP2 1.28E-05 PITPNM2 0.0001 ARL6 0.000375706
NFKB2 1.32E-05 RHPN2 0.00011
RALA 1.32E-05 UVRAG 0.00011
MCM4 1.33E-05 ZNF181 0.00011
GTF3C5 1.35E-05 POU2F2 0.00011
C7orf63 1.36E-05 C1GALT1 0.00011
ANKRD50 1.38E-05 HPS4 0.00011
TMEM44 1.40E-05 LSP1 0.00011
TNFRSF17 1.42E-05 TICAM1 0.00011
CD74 1.43E-05 ZNF382 0.00011
FNBP1L 1.47E-05 IKZF3 0.00012
이들 [표 3] 및 [도 25]로부터 [표 3] 및 [도 25]에 공통적으로 낮은 P-value값을 갖는 유전자(gene)에 포함된 FRH(s)가 혈액암 약물 반응성을 판단하기 위한 바이오마커로 실효성이 높은 것으로 판단할 수 있다.
여성암(breast, ovary) 약물에 대한 반응성 바이오 마커
Cancer_Class Gene_exp 바이오 마커(발현조절 FRH 변이세트)
##breast, ovary Gene_EXP:ADCY7 16_15664876_A_C
##breast, ovary Gene_EXP:AFAP1L2 2_39717176_T_G
##breast, ovary Gene_EXP:ASB8 19_35904227_A_C
##breast, ovary Gene_EXP:ASGR2 6_138499187_A_G,10_38696926_C_T
##breast, ovary Gene_EXP:C2CD2L 1_158255229_C_G
##breast, ovary Gene_EXP:CA5B 9_133696445_G_T
##breast, ovary Gene_EXP:CACHD1 2_240030066_G_A
##breast, ovary Gene_EXP:CAPN13 6_88143916_C_T
##breast, ovary Gene_EXP:CAPN8 2_206144039_C_A,2_206160720_T_C,2_206176329_T_C,4_118752896_G_GA
##breast, ovary Gene_EXP:CCDC64B 4_9244322_A_T
##breast, ovary Gene_EXP:CHRNA5 3_196708735_G_GA
##breast, ovary Gene_EXP:CLDN4 6_143503967_G_T
##breast, ovary Gene_EXP:CMIP 16_85071785_A_G
##breast, ovary Gene_EXP:CTSL1 3_138124252_C_T,12_12480353_A_G,14_95124733_G_A,17_18028570_C_CAA
##breast, ovary Gene_EXP:DNAJC18 2_140485313_A_T,2_140485349_T_C
##breast, ovary Gene_EXP:EFS 19_30444797_C_A
##breast, ovary Gene_EXP:EME2 7_108180467_G_T
##breast, ovary Gene_EXP:FAM83E 5_71204405_A_C
##breast, ovary Gene_EXP:GALNTL5 10_100352318_A_G,15_34255437_A_T
##breast, ovary Gene_EXP:HBEGF 9_61862148_G_A
##breast, ovary Gene_EXP:HIST2H2BE 6_132814681_A_G
##breast, ovary Gene_EXP:HMGA1 20_49248835_G_A,20_49270147_G_A
##breast, ovary Gene_EXP:HS3ST1 19_17422317_A_G
##breast, ovary Gene_EXP:IBA57 1_21472921_G_A,10_50850592_T_TTG,17_76280234_G_A
##breast, ovary Gene_EXP:ILF3 3_49256393_C_G,X_52516974_A_C
##breast, ovary Gene_EXP:ITGA6 7_74046648_T_G
##breast, ovary Gene_EXP:JAG1 3_122461164_C_G,3_122552357_T_TA,3_122558313_G_T,3_122558325_G_A,8_138636921_T_C
##breast, ovary Gene_EXP:KCNK5 18_8831617_G_A
##breast, ovary Gene_EXP:KIFC2 22_23966980_A_G
##breast, ovary Gene_EXP:MAFB 11_90202418_G_T,11_90206280_G_A
##breast, ovary Gene_EXP:NECAB2 19_57254064_A_G
##breast, ovary Gene_EXP:NECAB3 3_49256393_C_G,14_19827899_G_T
##breast, ovary Gene_EXP:P2RY2 5_169294_T_C,17_60211184_A_G
##breast, ovary Gene_EXP:PALMD 2_109615723_C_G
##breast, ovary Gene_EXP:PLXNA3 1_113114916_G_A
##breast, ovary Gene_EXP:PPP3CC 1_111414895_T_C,1_111414948_G_C
##breast, ovary Gene_EXP:PREX1 9_34371054_A_C
##breast, ovary Gene_EXP:PRR12 6_38813973_C_T
##breast, ovary Gene_EXP:PRRT3 12_57763713_A_C
##breast, ovary Gene_EXP:QSER1 1_15381304_A_C,13_79521022_A_T
##breast, ovary Gene_EXP:REEP5 14_77243033_A_C
##breast, ovary Gene_EXP:RGS2 18_12978734_C_G
##breast, ovary Gene_EXP:RNF208 4_7815971_GT_G,19_11832898_G_A
##breast, ovary Gene_EXP:RNF43 21_33262774_CT_C
##breast, ovary Gene_EXP:S100A2 14_64950352_C_A,19_17422317_A_G
##breast, ovary Gene_EXP:SERPINE1 1_17240836_G_T,X_156025548_C_T
##breast, ovary Gene_EXP:SGTB 9_74785802_T_C
##breast, ovary Gene_EXP:SLC19A1 11_1607735_G_A
##breast, ovary Gene_EXP:SLC26A1 1_237511850_A_AG
##breast, ovary Gene_EXP:SOAT1 7_108180467_G_T
##breast, ovary Gene_EXP:TMEM206 2_108378352_C_G,14_106335417_A_C,14_106360128_A_C
##breast, ovary Gene_EXP:TMPRSS3 2_118981693_C_T,2_135636088_A_G,2_135638730_T_C,16_71998332_T_A
##breast, ovary Gene_EXP:TNFRSF21 20_8802237_G_A
##breast, ovary Gene_EXP:TOX2 1_116133184_T_G
##breast, ovary Gene_EXP:TRMT2A 17_76280234_G_A
##breast, ovary Gene_EXP:YBX2 5_80320470_T_G,19_4770616_T_G,1_204257913_A_C,14_105919516_A_C,1_181798372_A_C
##breast, ovary Gene_EXP:ZMYND11 13_72746754_A_C,14_77243033_A_C
##breast, ovary Gene_EXP:ZNF239 10_35032587_A_C
##breast, ovary Gene_EXP:ABLIM1 4_70158293_T_TACAA
##breast, ovary Gene_EXP:ADK 3_57269656_A_G
##breast, ovary Gene_EXP:ARHGAP10 3_119212542_C_T
##breast, ovary Gene_EXP:BEND4 19_2917289_C_A
##breast, ovary Gene_EXP:C9orf50 6_30713139_C_T
##breast, ovary Gene_EXP:CSRP3 6_33801120_A_G
##breast, ovary Gene_EXP:DEFB124 4_183444992_C_T,6_107334154_A_C,6_107459275_C_G,6_107459279_A_G
##breast, ovary Gene_EXP:DIAPH1 7_74734035_C_T,13_31758155_C_G
##breast, ovary Gene_EXP:DOK7 3_38580976_T_C
##breast, ovary Gene_EXP:ETS1 5_139680901_G_A
##breast, ovary Gene_EXP:FBXO10 7_72961358_G_A,7_73180651_C_T,7_75212025_G_A,7_75403732_C_T,17_63918839_T_A
##breast, ovary Gene_EXP:GAS8 13_39724501_TA_T
##breast, ovary Gene_EXP:GSTCD 2_70236036_TA_T
##breast, ovary Gene_EXP:HBEGF 4_38137040_C_T
##breast, ovary Gene_EXP:MDM2 8_89769704_A_C,8_89786745_A_T,8_89786749_T_TC,8_89790263_A_G
##breast, ovary Gene_EXP:MSTN 12_65210914_C_T
##breast, ovary Gene_EXP:OLR1 22_39017940_A_C
##breast, ovary Gene_EXP:PDZD8 2_120289468_AT_A
##breast, ovary Gene_EXP:PRMT3 3_121809056_C_CT
##breast, ovary Gene_EXP:PTPN12 7_63297679_T_C
##breast, ovary Gene_EXP:RAI2 22_31685485_C_A
##breast, ovary Gene_EXP:RSPH9 2_196215830_T_C,15_42399466_C_G
##breast, ovary Gene_EXP:SDHAF1 10_35032524_A_C
##breast, ovary Gene_EXP:SLCO3A1 10_98392420_C_T,10_98420094_T_C
##breast, ovary Gene_EXP:STAC3 12_65210914_C_T,14_22105305_C_A,15_62835784_G_A,X_299277_G_T
##breast, ovary Gene_EXP:STOML2 5_154027084_C_T,5_154033830_C_T,5_154053173_T_C
##breast, ovary Gene_EXP:SYNGR2 17_41830878_T_C
##breast, ovary Gene_EXP:TMEM106C 7_149253814_T_G
##breast, ovary Gene_EXP:UBE3B 1_3729650_T_C
##breast, ovary Gene_EXP:USF2 13_28048219_G_A,13_28049622_C_T,13_28049801_G_GA,20_56365300_T_C
##breast, ovary Gene_EXP:VASN X_152750582_A_C
##breast, ovary Gene_EXP:WFDC2 2_97152499_A_C,2_97152524_G_T,2_97152525_C_G,2_97152527_G_T,2_97152546_G_C
##breast, ovary Gene_EXP:WNK3 2_86119057_G_A
##breast, ovary Gene_EXP:ZFP82 11_1243593_T_C
##breast, ovary Gene_EXP:ZNF302 17_36013794_G_A
##breast, ovary Gene_EXP:ZNF331 18_36818951_C_T
##breast, ovary Gene_EXP:ZSCAN18 14_64741308_T_C
[표 4]에 제시된 FRH 들이 해당 유전자(gene) 발현과의 상관도(P-value)를 산출한 결과가 아래 [표 5]에 정리되어있다.
또한, [표 4]에 제시된 FRH들이 포함되어 발현된 유전자 중 주요유전자와 각각의 breast, ovary(여성암) 약물과의 상관도(P-value)를 산출한 결과가 아래 도 26에 정리되어있다.
Correlation between gene expression and FRH
Gene pvalue(FRH-Gene_exp) Gene pvalue(FRH-Gene_exp) Gene pvalue(FRH-Gene_exp)
RSPO4 9.21E-09 FERMT1 1.08E-05 RARA 5.78E-05
AMPD3 2.10E-08 MRPL24 1.19E-05 RAB26 5.80E-05
IRX5 3.24E-08 SLC1A2 1.21E-05 COL4A5 5.83E-05
IRX3 1.14E-07 PLAG1 1.30E-05 CASP4 5.86E-05
PCP4 1.69E-07 EPHA2 1.36E-05 XBP1 5.88E-05
TRPS1 2.79E-07 ETFDH 1.36E-05 NUPR1 5.89E-05
ABHD11 3.28E-07 HLF 1.39E-05 ICAM3 5.93E-05
PRLR 3.37E-07 PLAT 1.43E-05 RHOB 5.95E-05
GADD45A 4.40E-07 ZC3H12C 1.46E-05 CAV2 5.95E-05
CRIP2 5.39E-07 PIM1 1.61E-05 SCARB2 6.05E-05
YBX2 5.70E-07 PDXDC1 1.67E-05 MMP14 6.07E-05
TGFB3 6.56E-07 CARD14 1.68E-05 INTS12 6.18E-05
FAM76B 7.97E-07 FGFR4 1.69E-05 LMO3 6.28E-05
SELENBP1 8.09E-07 PKN2 1.78E-05 RGS20 6.28E-05
CISH 8.21E-07 SSBP2 1.78E-05 A1BG 6.31E-05
PREX1 1.01E-06 PEX11B 1.79E-05 HPX 6.33E-05
DIXDC1 1.05E-06 CDCP1 1.85E-05 KCNJ4 6.34E-05
PHLDA1 1.18E-06 PPP4R1 1.95E-05 CLUAP1 6.45E-05
OLFM1 1.35E-06 IL17RC 2.01E-05 ACTN1 6.47E-05
ITGA6 1.36E-06 SLC16A6 2.07E-05 ANXA6 6.48E-05
F12 1.44E-06 HPN 2.33E-05 PDCD4 6.52E-05
CGREF1 1.45E-06 SUSD1 2.36E-05 KNCN 6.56E-05
UBE2E3 1.62E-06 TRMT12 2.36E-05 ATP10A 6.56E-05
LARGE 1.69E-06 COTL1 2.58E-05 CCDC117 6.59E-05
PDZRN3 2.01E-06 KCTD3 2.62E-05 LCA5 6.75E-05
MAPK8IP2 2.08E-06 PLCH1 2.63E-05 GLYATL1 6.85E-05
SOGA2 2.14E-06 ARNTL2 2.68E-05 ENTPD2 6.92E-05
PPFIA3 2.34E-06 CCDC50 2.73E-05 HS3ST1 6.97E-05
SERF2 2.60E-06 CDC14B 2.75E-05 CPEB3 7.07E-05
LTBP2 2.70E-06 SEPP1 2.85E-05 TGIF1 7.20E-05
ZNF324B 2.98E-06 PLAU 3.02E-05 PFKFB3 7.28E-05
PRR7 3.00E-06 PLA2G12A 3.07E-05 PI4K2A 7.34E-05
CYB561 3.17E-06 NUDT16L1 3.11E-05 ATP8A1 7.41E-05
MUC5B 3.37E-06 ADCY9 3.23E-05 NUTF2 7.47E-05
NCKAP5 3.39E-06 VPS37D 3.24E-05 NHS 7.53E-05
IGSF5 3.46E-06 FIS1 3.39E-05 WBP5 7.55E-05
MMAA 3.90E-06 UAP1L1 3.41E-05 C9orf152 7.66E-05
ATP2A3 3.93E-06 UFSP1 3.65E-05 LDB1 7.71E-05
CMIP 4.14E-06 CREB3L4 3.77E-05 SMCHD1 7.78E-05
CCDC82 4.26E-06 EIF2B5 3.78E-05 NAV2 7.80E-05
NFE2L3 4.56E-06 AMZ1 3.82E-05 PTPRM 7.84E-05
UTS2R 4.84E-06 PIP 3.83E-05 OPRD1 7.91E-05
HMGA1 5.12E-06 NKX6-3 3.88E-05 KMO 7.96E-05
STK24 5.27E-06 PPARG 4.06E-05 PFKFB1 7.97E-05
ITGA3 5.71E-06 VGLL3 4.32E-05 SLC2A4 8.19E-05
NT5E 6.11E-06 TP53I11 4.34E-05 ZNF598 8.33E-05
NPNT 6.20E-06 PRRT2 4.47E-05 TENC1 8.34E-05
NFAT5 6.34E-06 NUBP2 4.52E-05 OSBPL3 8.43E-05
ATP6V1F 6.44E-06 LAMC2 4.53E-05 TMEM106A 8.46E-05
NOL3 6.78E-06 RSPH1 4.73E-05 SPDEF 8.54E-05
TNS1 7.24E-06 DEFB132 4.85E-05 TTC39A 8.56E-05
TMEM192 7.31E-06 NECAB3 4.92E-05 DGAT1 8.76E-05
DECR2 7.48E-06 RAB3A 4.96E-05 FAM63A 8.81E-05
TMEM141 7.49E-06 SLC24A3 4.99E-05 LMCD1 8.82E-05
PBX1 7.55E-06 CA12 5.03E-05 EGFR 8.83E-05
ZNF467 7.62E-06 TC2N 5.09E-05 TUBGCP2 8.89E-05
CIB3 7.96E-06 NINJ1 5.28E-05 RHBDD3 9.00E-05
ECHDC3 8.00E-06 DNAJC22 5.31E-05 TFPI2 9.01E-05
CHRM1 8.78E-06 ARPC2 5.35E-05 STK32B 9.02E-05
DNAAF1 8.98E-06 ITGBL1 5.38E-05 GSTCD 9.11E-05
FYN 9.41E-06 CCDC149 5.39E-05 RGL2 9.42E-05
INPP1 9.73E-06 DERL1 5.40E-05 NDUFB9 9.43E-05
AAK1 9.84E-06 UPP1 5.60E-05 SYCP2 9.47E-05
SPRY2 1.05E-05 ELK3 5.63E-05 CBX4 9.49E-05
REM1 1.06E-05 SAMD9 5.68E-05 DLG2 9.56E-05
TTYH2 1.07E-05 ARL4C 5.71E-05 KIF12 9.70E-05
이들 [표 4-1] 및 [도 26]으로부터 [표 4-1] 및 [도 26]에 공통적으로 낮은 P-value값을 갖는 유전자(gene)에 포함된 FRH(s)가 여성암 약물 반응성을 판단하기 위한 바이오마커로 실효성이 높은 것으로 판단할 수 있다.
brain(뇌종양) 약물에 대한 반응성 바이오 마커
Cancer_Class Gene_exp 바이오 마커 (발현조절 FRH 변이세트)
##brain Gene_EXP:VN1R1 1_213007133_T_G
##brain Gene_EXP:PCDH9 3_75669056_G_A
##brain Gene_EXP:AADAT 11_12162199_T_G
##brain Gene_EXP:FILIP1L 2_117977926_TAGTC_T
##brain Gene_EXP:VPRBP 3_128945112_G_A
##brain Gene_EXP:PDCD1LG2 3_165019547_G_T,11_12162199_T_G
##brain Gene_EXP:AARS2 2_211420614_AAAAG_A
##brain Gene_EXP:FKBP14 16_72119226_C_G
##brain Gene_EXP:VSTM2A 13_113159942_A_G,16_1817242_T_C
##brain Gene_EXP:PDCD2L 1_150558532_T_C,2_196880031_T_C
##brain Gene_EXP:ABAT 3_51381020_A_G,3_197683305_A_C,16_24930679_T_G,19_18216930_A_C
##brain Gene_EXP:FKBP15 3_128945112_G_A,X_2856636_A_C,19_4911043_A_C,5_181155466_T_G,8_122952205_T_G
##brain Gene_EXP:WASF1 2_108507561_T_G,10_43200831_A_G,16_55415_T_G
##brain Gene_EXP:PDGFA 2_66439901_A_C
##brain Gene_EXP:ABCC3 16_87644643_G_A,17_55774876_T_G,3_133839473_T_G,1_44804312_T_G,8_7290003_A_C
##brain Gene_EXP:WDR1 10_11921140_T_G,13_113159942_A_G,16_1817242_T_C,18_79527652_GAA_G
##brain Gene_EXP:PDP1 1_248441636_T_G
##brain Gene_EXP:FLII 1_213007133_T_G,2_86027990_C_A,12_51745916_T_G,16_1342948_A_C
##brain Gene_EXP:PDSS1 5_180624003_T_C,12_40313960_G_T
##brain Gene_EXP:ABCC3 6_29588459_T_G,1_154331414_T_G,12_40313960_G_T,17_7797836_A_C,7_149253814_T_G
##brain Gene_EXP:FLNA 13_113159942_A_G,16_1817242_T_C,10_11921140_T_G,1_15381304_A_C,20_34750204_T_G
##brain Gene_EXP:PDXDC1 1_248061096_A_G
##brain Gene_EXP:PDXK 16_72164743_G_A
##brain Gene_EXP:ABCC8 3_128945112_G_A
##brain Gene_EXP:WDR12 6_29588459_T_G,1_154331414_T_G,7_149253814_T_G,12_40313960_G_T,17_7797836_A_C
##brain Gene_EXP:FLNA 16_1817242_T_C,3_100302035_G_T,8_122952205_T_G,13_113159942_A_G,15_84241166_A_C
##brain Gene_EXP:PEA15 8_7290003_A_C,5_181155466_T_G,10_50311228_T_G,2_60761746_T_G,11_12162199_T_G
##brain Gene_EXP:ABHD12 2_190469793_G_C
##brain Gene_EXP:WDR12 6_29588459_T_G,17_7797836_A_C,3_142177436_A_G,1_154331414_T_G,17_73202973_G_T
##brain Gene_EXP:ABHD2 20_31465452_G_A,20_31476528_A_G
##brain Gene_EXP:FLNA 20_34750204_T_G,10_79312556_A_G,15_84241166_A_C,16_1817242_T_C,3_100302035_G_T
##brain Gene_EXP:PEBP1 4_108762737_T_G
##brain Gene_EXP:ACOT9 3_128945112_G_A,6_29631350_A_G,10_11921140_T_G,11_12162199_T_G,13_113159942_A_G
##brain Gene_EXP:PEX5 2_96842345_G_C
##brain Gene_EXP:WDR18 1_64663808_A_C
##brain Gene_EXP:FLNB 19_15878967_A_C
##brain Gene_EXP:PFDN2 1_200988322_T_G
##brain Gene_EXP:WDR3 5_88722571_GA_G,10_5909062_T_C
##brain Gene_EXP:ACP1 2_86604885_C_A,2_113934259_C_T,5_181155466_T_G,11_12162199_T_G,19_3281403_A_C
##brain Gene_EXP:FLVCR1 10_11921140_T_G,11_12162199_T_G
##brain Gene_EXP:PGAP1 11_65547388_T_G,13_113159942_A_G
##brain Gene_EXP:WDR75 2_190469793_G_C,1_154331414_T_G,3_196782572_G_T,7_149253814_T_G,18_14183954_G_T
##brain Gene_EXP:FOSL1 1_213007133_T_G,12_51745916_T_G,12_57062993_T_G,13_39724512_C_T
##brain Gene_EXP:PHACTR3 16_30953637_A_C
##brain Gene_EXP:ACSL4 11_33583339_C_T,11_33583414_C_T,11_33606557_T_G
##brain Gene_EXP:WDR86 16_87644643_G_A,19_9566733_T_G,20_42084724_T_C
##brain Gene_EXP:PHF11 11_12162199_T_G,X_2856636_A_C,X_119150617_A_C
##brain Gene_EXP:ACTB 11_12162199_T_G
##brain Gene_EXP:FSD1L 11_12162199_T_G,11_65547388_T_G,13_113159942_A_G
##brain Gene_EXP:WHAMM 2_113934259_C_T
##brain Gene_EXP:PHF21B 11_12162199_T_G,13_113159942_A_G,16_1817242_T_C,16_30953637_A_C
##brain Gene_EXP:ACTL6B 2_105307612_A_C,11_43920052_A_C,13_113159942_A_G,16_1817242_T_C
##brain Gene_EXP:FTL 5_69653664_G_C
##brain Gene_EXP:WIPI1 1_155709773_T_G,2_127651579_A_C
##brain Gene_EXP:FUBP1 16_28169801_A_C
##brain Gene_EXP:PHF5A 1_54243266_A_G,15_82430191_A_C,11_12162199_T_G,17_737856_G_T,20_18142912_A_C
##brain Gene_EXP:ACTN2 1_213007133_T_G
##brain Gene_EXP:WNK2 10_11921140_T_G
##brain Gene_EXP:FUCA1 1_153341603_A_C,11_12162199_T_G
##brain Gene_EXP:ACTN4 1_213007133_T_G,10_73803641_A_G,11_12162199_T_G,12_51745916_T_G
##brain Gene_EXP:WNT5A 11_65547388_T_G
##brain Gene_EXP:FUCA2 1_185150475_G_A,X_54813054_T_G
##brain Gene_EXP:PHF5A 5_140841707_A_C,1_54243266_A_G,17_737856_G_T,15_82430191_A_C,20_18142912_A_C
##brain Gene_EXP:WWC3 16_70661204_T_G,8_27431326_A_G,17_7797836_A_C,19_4911043_A_C,20_63999659_A_C
##brain Gene_EXP:G6PD 16_87644643_G_A
##brain Gene_EXP:ACTR5 2_96842345_G_C,2_178663651_C_T
##brain Gene_EXP:GAB2 1_451649_A_AG
##brain Gene_EXP:PHIP 12_40313960_G_T,15_55329691_T_C,15_55340661_G_T
##brain Gene_EXP:ACVR1B 2_113934259_C_T,5_181155466_T_G,10_79312556_A_G,11_12162199_T_G,12_6818898_A_C
##brain Gene_EXP:WWC3 19_4911043_A_C,17_7797836_A_C,19_15113629_A_C,16_70661204_T_G,14_93183653_A_C
##brain Gene_EXP:GABRB3 2_15474280_T_C,2_15534562_T_C,13_113159942_A_G,16_1817242_T_C
##brain Gene_EXP:PHOX2A 12_51745916_T_G
##brain Gene_EXP:PHYHIPL 13_113159942_A_G,16_30953637_A_C
##brain Gene_EXP:ACVR2B 3_128945112_G_A,13_113159942_A_G,11_34452090_T_G,16_1817242_T_C,11_65547388_T_G
##brain Gene_EXP:WWTR1 3_128945112_G_A,10_11921140_T_G,16_1817242_T_C
##brain Gene_EXP:GADD45B 11_12162199_T_G,12_51745916_T_G
##brain Gene_EXP:PIEZO1 13_113159942_A_G
##brain Gene_EXP:XPC 20_62396250_G_C
##brain Gene_EXP:GAL 2_66439901_A_C,9_37887606_C_T
##brain Gene_EXP:ACVR2B 3_128945112_G_A,16_1817242_T_C,13_113159942_A_G,11_34452090_T_G,10_11921140_T_G
##brain Gene_EXP:PIK3C2B 7_45038379_G_A,9_121300007_T_G,10_11921140_T_G
##brain Gene_EXP:XPO5 11_65547388_T_G,15_75524142_T_C
##brain Gene_EXP:GAL3ST3 16_55415_T_G,X_100585180_G_T,19_7740447_T_G,2_113934259_C_T,10_79312556_A_G
##brain Gene_EXP:PIKFYVE 2_32465180_C_T
##brain Gene_EXP:XRCC2 2_219297298_T_G
##brain Gene_EXP:ADAM10 17_63963708_T_C
##brain Gene_EXP:PINK1 17_55774876_T_G
##brain Gene_EXP:XRCC5 20_42084724_T_C
##brain Gene_EXP:GALNT10 6_30705792_T_G,11_65547388_T_G,12_40313960_G_T
##brain Gene_EXP:ADAM9 3_165019547_G_T,10_11921140_T_G,11_12162199_T_G,12_51745916_T_G,5_181155466_T_G
##brain Gene_EXP:PKIA 13_113159942_A_G
##brain Gene_EXP:YEATS4 1_12001708_A_G,6_31966660_T_G,12_6818898_A_C,19_9566733_T_G
##brain Gene_EXP:GAS6 1_2303248_C_T,1_154331414_T_G,1_156912285_A_C
##brain Gene_EXP:PKIG 2_105307612_A_C,10_46337735_A_G,10_47523038_G_A
##brain Gene_EXP:GATA2 13_113159942_A_G
##brain Gene_EXP:ADAM9 3_165019547_G_T,10_11921140_T_G,11_12162199_T_G,12_51745916_T_G,8_122952205_T_G
##brain Gene_EXP:YIPF2 2_113934259_C_T
##brain Gene_EXP:PLAUR 7_72942379_A_C,11_12162199_T_G,12_51745916_T_G
##brain Gene_EXP:GBA 10_11921140_T_G,13_113159942_A_G,16_1817242_T_C
##brain Gene_EXP:YTHDC1 11_12162199_T_G
##brain Gene_EXP:PLEC 7_72942379_A_C,10_11921140_T_G,10_79312556_A_G,12_51745916_T_G
##brain Gene_EXP:ADAM9 3_165019547_G_T,11_12162199_T_G,10_11921140_T_G,5_181155466_T_G,12_51745916_T_G
##brain Gene_EXP:GBE1 19_47441156_T_G,10_11921140_T_G,16_58525116_G_T,8_7290003_A_C,5_181155466_T_G
##brain Gene_EXP:ZBED4 2_108507561_T_G,11_65547388_T_G
##brain Gene_EXP:PLEKHA4 7_2269556_T_A
##brain Gene_EXP:ZBTB34 3_165019547_G_T
##brain Gene_EXP:ADAMTS12 17_81695118_T_G,10_45773152_T_G,8_120342359_T_G,12_45173236_T_G,10_45773156_T_G
##brain Gene_EXP:GBE1 8_122952205_T_G,11_73355795_A_G,14_93183653_A_C,5_181155466_T_G,19_47441156_T_G
##brain Gene_EXP:PLEKHF2 7_108023984_G_A
##brain Gene_EXP:ZBTB39 16_30953637_A_C
##brain Gene_EXP:ADAMTS17 13_113159942_A_G
##brain Gene_EXP:PLIN3 11_12162199_T_G
##brain Gene_EXP:GBE1 8_122952205_T_G,14_93183653_A_C,5_181155466_T_G,19_47441156_T_G,19_9566733_T_G
##brain Gene_EXP:ZBTB4 6_30705792_T_G,10_11921140_T_G,17_55774876_T_G
##brain Gene_EXP:ADAMTSL2 8_122952205_T_G,9_136745293_A_C,14_20996722_T_G
##brain Gene_EXP:PLK2 3_9688859_C_T,5_127331576_G_A
##brain Gene_EXP:ZBTB47 16_58526137_A_C
##brain Gene_EXP:GBP1 11_12162199_T_G
##brain Gene_EXP:ADRBK2 11_65547388_T_G,17_78476773_C_T
##brain Gene_EXP:PLOD1 2_113934259_C_T
##brain Gene_EXP:ZBTB7A 3_14704350_G_A
##brain Gene_EXP:GBP2 11_12162199_T_G
##brain Gene_EXP:AGA 2_66439901_A_C,22_18345089_T_G
##brain Gene_EXP:PLOD2 2_66439901_A_C
##brain Gene_EXP:ZC3H15 2_154854926_A_C,3_196782572_G_T,7_149253814_T_G,20_63929447_G_C
##brain Gene_EXP:GBP3 8_7290003_A_C,12_40313960_G_T,15_75524142_T_C
##brain Gene_EXP:AGAP1 12_44376797_G_A,13_113159942_A_G,11_65547388_T_G,16_48133728_A_G,3_115720911_A_C
##brain Gene_EXP:PLP2 5_181155466_T_G,6_33296240_C_A,8_30756677_T_G,12_104287190_A_G
##brain Gene_EXP:GCNT1 8_41957277_G_C,10_89402920_C_T
##brain Gene_EXP:ZC3H8 11_12162199_T_G
##brain Gene_EXP:AGBL5 1_224250187_A_G
##brain Gene_EXP:PLSCR4 16_55415_T_G,17_51169925_C_T
##brain Gene_EXP:GDAP1L1 13_113159942_A_G,16_1817242_T_C,9_128835995_A_C,11_125626705_T_G,16_30953637_A_C
##brain Gene_EXP:ZC3HAV1 1_149852603_A_G
##brain Gene_EXP:AGPAT3 1_183963850_T_G,11_65547388_T_G,13_113159942_A_G
##brain Gene_EXP:PMEL 20_42084724_T_C
##brain Gene_EXP:ZCCHC12 1_1676790_C_T,6_43052450_G_A
##brain Gene_EXP:GDPD1 9_69516199_A_C
##brain Gene_EXP:AGTPBP1 11_65547388_T_G,13_113159942_A_G
##brain Gene_EXP:PML 11_12162199_T_G
##brain Gene_EXP:ZCCHC24 12_6818898_A_C
##brain Gene_EXP:GFPT2 1_12938859_G_A,7_72942379_A_C
##brain Gene_EXP:AHNAK 10_79312556_A_G
##brain Gene_EXP:PNMA3 1_149852603_A_G,16_18379704_T_G,20_16044565_T_G,16_55415_T_G,22_17727059_T_G
##brain Gene_EXP:ZDHHC17 1_248638477_A_T
##brain Gene_EXP:GFRA2 5_38950065_A_T,16_30953637_A_C
##brain Gene_EXP:ALKBH2 19_3281403_A_C,16_30953637_A_C,11_12162199_T_G,8_27431326_A_G,1_228244520_T_G
##brain Gene_EXP:ZDHHC7 2_27449240_T_G
##brain Gene_EXP:PNMA3 1_149852603_A_G,16_18379704_T_G,20_16044565_T_G,22_17727059_T_G,16_55415_T_G
##brain Gene_EXP:GGCX 16_1817242_T_C
##brain Gene_EXP:ZFYVE21 22_42212334_A_C
##brain Gene_EXP:ALKBH2 19_3281403_A_C,16_30953637_A_C,8_27431326_A_G,10_73803641_A_G,11_12162199_T_G
##brain Gene_EXP:GIGYF2 17_55774876_T_G
##brain Gene_EXP:ZHX3 2_27449240_T_G,6_31648729_A_C
##brain Gene_EXP:PNN 13_39724512_C_T
##brain Gene_EXP:GINM1 4_154328181_A_C,7_72942379_A_C,10_73803641_A_G,11_12162199_T_G
##brain Gene_EXP:ZNF121 11_12162199_T_G,13_113159942_A_G,16_1817242_T_C
##brain Gene_EXP:ALPK2 11_12162199_T_G,12_40313960_G_T,22_19918884_A_C
##brain Gene_EXP:POC5 12_9304133_T_C,12_31094748_T_C,Y_11344922_A_G
##brain Gene_EXP:ZNF124 2_170965958_A_C,13_113159942_A_G,17_55774876_T_G
##brain Gene_EXP:AMFR 1_150464600_A_C,1_185150475_G_A,21_46245172_A_C,10_97432342_T_G,17_57116234_T_G
##brain Gene_EXP:PODXL2 12_51745916_T_G,13_113159942_A_G
##brain Gene_EXP:GLB1 1_54243266_A_G,1_219979389_T_A,7_72942379_A_C
##brain Gene_EXP:ZNF195 2_113934259_C_T,12_40313960_G_T,12_51745916_T_G
##brain Gene_EXP:POFUT1 4_118640836_A_T
##brain Gene_EXP:GLB1L2 2_113934259_C_T,7_108023984_G_A
##brain Gene_EXP:ZNF219 15_43716974_A_C
##brain Gene_EXP:ANKMY2 12_51745916_T_G
##brain Gene_EXP:POFUT2 7_95495738_CT_C,16_72119226_C_G,16_72164743_G_A
##brain Gene_EXP:GLCCI1 13_113159942_A_G,16_1817242_T_C
##brain Gene_EXP:ZNF266 16_14644660_C_T
##brain Gene_EXP:ANKRD40 4_9908299_G_A
##brain Gene_EXP:POLD1 17_36104042_G_T,19_9566733_T_G
##brain Gene_EXP:GLI3 16_83602507_A_G
##brain Gene_EXP:ZNF280B 11_65547388_T_G
##brain Gene_EXP:ANKRD46 10_11921140_T_G
##brain Gene_EXP:POLG2 19_4911043_A_C,22_22098988_G_T
##brain Gene_EXP:GLIPR1 10_11921140_T_G,19_4911043_A_C
##brain Gene_EXP:ZNF32 1_89186388_T_C,1_89186389_C_T
##brain Gene_EXP:ANO6 3_9928758_C_T
##brain Gene_EXP:POLR1B 12_40313960_G_T
##brain Gene_EXP:GLIS3 2_66439901_A_C,8_7290003_A_C,8_41957277_G_C,10_50311228_T_G,11_65547388_T_G
##brain Gene_EXP:ZNF367 7_30778382_G_A
##brain Gene_EXP:ANXA1 13_113159942_A_G,16_1817242_T_C,10_11921140_T_G,2_113934259_C_T,5_181155466_T_G
##brain Gene_EXP:POLR1C 16_14868419_C_A
##brain Gene_EXP:ZNF420 13_113159942_A_G
##brain Gene_EXP:GLTP 1_149852603_A_G,2_61492168_C_A
##brain Gene_EXP:POLR1D 2_206705805_G_C,8_12430448_C_T
##brain Gene_EXP:ANXA1 13_113159942_A_G,16_1817242_T_C,10_11921140_T_G,5_181155466_T_G,12_51745916_T_G
##brain Gene_EXP:ZNF507 11_65547388_T_G,17_55774876_T_G
##brain Gene_EXP:GNA12 7_129389033_T_G,12_51745916_T_G,13_113325626_T_C
##brain Gene_EXP:POLR2B 20_31864041_C_T
##brain Gene_EXP:ZNF516 1_234373536_T_G,3_184301903_T_G,9_37887606_C_T,17_55774876_T_G
##brain Gene_EXP:GNAI2 1_149852603_A_G,1_150261398_T_G,17_55774876_T_G,17_77213881_T_G,1_154627925_A_C
##brain Gene_EXP:PON2 10_11921140_T_G,13_113159942_A_G,16_1817242_T_C,19_3281403_A_C
##brain Gene_EXP:ANXA11 16_1817242_T_C
##brain Gene_EXP:ANXA2 2_86604885_C_A,5_181155466_T_G,6_33296240_C_A,8_30756677_T_G,12_57178583_A_C
##brain Gene_EXP:ZNF561 2_9954863_A_G
##brain Gene_EXP:GNAI2 1_149852603_A_G,1_150261398_T_G,17_55774876_T_G,5_181155466_T_G,17_77213881_T_G
##brain Gene_EXP:POU2F1 12_51745916_T_G
##brain Gene_EXP:ZNF562 1_43984998_A_C
##brain Gene_EXP:PPAP2A 5_133233474_T_G,12_57244313_A_C
##brain Gene_EXP:ANXA4 6_33799054_A_G,8_27431326_A_G,8_30756677_T_G,19_11402175_A_C
##brain Gene_EXP:ZNF589 10_73803641_A_G
##brain Gene_EXP:GNAI2 1_150261398_T_G,5_181155466_T_G,1_149852603_A_G,17_55774876_T_G,17_77213881_T_G
##brain Gene_EXP:PPAPDC2 7_44964464_T_C,7_45064532_G_A
##brain Gene_EXP:ZNF607 1_9735624_A_C,3_128945112_G_A,11_12162199_T_G
##brain Gene_EXP:PPAT 14_55169342_TAAA_T,1_46261223_G_A,1_228244520_T_G,2_154854926_A_C,6_56557393_C_T
##brain Gene_EXP:ANXA5 5_181155466_T_G,9_69516199_A_C,12_51745916_T_G,13_113325635_A_G
##brain Gene_EXP:GNB5 22_17727059_T_G
##brain Gene_EXP:ZNF638 5_427675_T_C,10_73803531_T_C,13_39724512_C_T,22_17727059_T_G
##brain Gene_EXP:GNG4 13_113159942_A_G
##brain Gene_EXP:PPAT 14_55169342_TAAA_T,1_46261223_G_A,6_56557393_C_T,8_27431326_A_G,5_141478412_T_C
##brain Gene_EXP:ANXA7 1_45019269_T_G,17_36608462_A_C,16_1817242_T_C,13_113159942_A_G,5_427675_T_C
##brain Gene_EXP:ZNF696 12_40313960_G_T
##brain Gene_EXP:GNPDA2 3_191358113_C_T
##brain Gene_EXP:ZNF704 11_120836935_C_T
##brain Gene_EXP:GOLGA4 1_102989661_C_T,6_161149171_A_T
##brain Gene_EXP:PPFIBP1 8_122952205_T_G,17_1010919_A_C
##brain Gene_EXP:AP2S1 2_27774175_G_T,2_61492168_C_A,7_100951952_T_A,7_100951953_T_A
##brain Gene_EXP:ZNF708 1_172308705_AT_A,17_41567189_T_G
##brain Gene_EXP:GOLPH3 3_128945112_G_A,4_190022208_C_G,10_390794_C_G,10_73803531_T_C
##brain Gene_EXP:PPIC 2_66439901_A_C
##brain Gene_EXP:APEX1 17_55774876_T_G
##brain Gene_EXP:ZNF709 16_24793502_A_C
##brain Gene_EXP:PPP1CC 1_185150475_G_A,10_11921140_T_G,11_124896232_A_G
##brain Gene_EXP:GOLT1B 16_72119226_C_G,16_72129067_G_T,16_72164743_G_A
##brain Gene_EXP:ARF6 1_173850301_T_G
##brain Gene_EXP:ZNF74 11_65547388_T_G,17_55774876_T_G,2_113934259_C_T,2_61492168_C_A,5_181155466_T_G
##brain Gene_EXP:PQLC3 10_11921140_T_G,16_18379704_T_G
##brain Gene_EXP:GPC1 1_54243266_A_G,10_74988957_T_G,17_7797836_A_C,7_75364819_A_C,3_113344632_A_C
##brain Gene_EXP:ARHGAP1 13_113159942_A_G
##brain Gene_EXP:PRAME 16_67909562_C_A,19_57720377_A_G,22_42212334_A_C
##brain Gene_EXP:ZNF74 17_55774876_T_G,11_65547388_T_G,5_181155466_T_G,2_113934259_C_T,1_234373536_T_G
##brain Gene_EXP:ARHGAP19 14_55169342_TAAA_T
##brain Gene_EXP:PRCC 2_105307612_A_C,4_9908299_G_A,19_8943580_T_G
##brain Gene_EXP:GPHN 11_12162199_T_G,13_39724512_C_T
##brain Gene_EXP:ARID2 11_12162199_T_G,16_72119226_C_G,16_72129067_G_T,16_72164743_G_A
##brain Gene_EXP:PRICKLE2 11_65547388_T_G
##brain Gene_EXP:ZNF74 17_55774876_T_G,11_65547388_T_G,5_181155466_T_G,2_61492168_C_A,1_234373536_T_G
##brain Gene_EXP:GPN2 1_451649_A_AG,1_873548_C_T,17_55774876_T_G
##brain Gene_EXP:PRIM1 2_218827668_A_C
##brain Gene_EXP:GPR125 5_181155466_T_G
##brain Gene_EXP:ARID3B 8_7290003_A_C
##brain Gene_EXP:PRKAA1 3_128945112_G_A,X_100585180_G_T
##brain Gene_EXP:ZNF74 17_55774876_T_G,11_65547388_T_G,8_7290003_A_C,1_234373536_T_G,2_61492168_C_A
##brain Gene_EXP:GPS1 1_111982463_G_A
##brain Gene_EXP:ARL1 6_25488355_C_T,6_25510468_CAT_C,9_93293047_T_G,12_51745916_T_G,13_113159942_A_G
##brain Gene_EXP:PRLHR 6_56067480_C_T,10_26746549_C_T
##brain Gene_EXP:GPX8 13_113159942_A_G,16_72119226_C_G
##brain Gene_EXP:ZNF781 6_30705792_T_G,11_65547388_T_G
##brain Gene_EXP:PRMT1 1_26034759_T_G,5_181155466_T_G
##brain Gene_EXP:ARL6IP5 14_102870248_A_C
##brain Gene_EXP:GRASP 12_40313960_G_T
##brain Gene_EXP:ZNF804A 6_73622013_G_C,6_73635330_C_T
##brain Gene_EXP:PRMT6 3_53872486_G_A,7_35240878_C_T
##brain Gene_EXP:ARRB2 2_170965958_A_C,20_33848655_A_C
##brain Gene_EXP:GREB1 11_65547388_T_G
##brain Gene_EXP:ZNFX1 11_125626705_T_G
##brain Gene_EXP:PRNP 12_51745916_T_G
##brain Gene_EXP:ASB13 17_28613683_A_C
##brain Gene_EXP:GRIA4 13_113159942_A_G
##brain Gene_EXP:ZNRF3 2_27774175_G_T
##brain Gene_EXP:PRPF40B 17_64146068_T_G
##brain Gene_EXP:ASCL1 7_72942379_A_C
##brain Gene_EXP:GRIK3 3_128945112_G_A
##brain Gene_EXP:ZSCAN16 16_72119226_C_G
##brain Gene_EXP:PRPH 1_451649_A_AG
##brain Gene_EXP:ASPH 2_105307612_A_C
##brain Gene_EXP:GRPEL2 5_133233474_T_G,9_108900415_C_A,10_11921140_T_G
##brain Gene_EXP:ZSCAN2 2_61492168_C_A
##brain Gene_EXP:PRR14L 11_65547388_T_G
##brain Gene_EXP:ATCAY 13_113159942_A_G,16_1817242_T_C,6_33279455_T_G,16_30953637_A_C,9_5549463_A_C
##brain Gene_EXP:GSDMD Gene_EXP:WDR12
##brain Gene_EXP:PRRC1 15_31037741_G_A,15_31046297_T_G
##brain Gene_EXP:GSN 5_181155466_T_G,10_11921140_T_G,13_113159942_A_G,15_75524142_T_C,16_1817242_T_C
##brain Gene_EXP:PRRX1 10_96527504_G_C
##brain Gene_EXP:ATF7IP2 2_63887264_C_CA,1_149852603_A_G,17_55774876_T_G,10_73803531_T_C,22_17727059_T_G
##brain Gene_EXP:PRSS23 10_11921140_T_G,13_113325635_A_G
##brain Gene_EXP:GTF2H5 3_165019547_G_T,16_15664675_G_T
##brain Gene_EXP:ATF7IP2 2_63887264_C_CA,17_55774876_T_G,1_149852603_A_G,10_73803531_T_C,22_17727059_T_G
##brain Gene_EXP:PSMB9 10_11921140_T_G,11_12162199_T_G,16_55415_T_G,X_2856636_A_C
##brain Gene_EXP:GTF3C2 7_128839939_T_G,7_159142364_T_G
##brain Gene_EXP:GTPBP4 12_40313960_G_T
##brain Gene_EXP:ATG4A 2_61492168_C_A,2_113934259_C_T,9_35398502_T_G,9_108900415_C_A,16_87644643_G_A
##brain Gene_EXP:PTHLH 10_11921140_T_G
##brain Gene_EXP:GUF1 1_213007133_T_G,5_181155466_T_G,11_12162199_T_G,11_65547388_T_G,17_55774876_T_G
##brain Gene_EXP:PTRF 13_113159942_A_G,10_11921140_T_G,12_57178583_A_C,8_122952205_T_G,11_12162199_T_G
##brain Gene_EXP:ATIC 7_34811781_C_G,12_40313960_G_T
##brain Gene_EXP:H1FX 11_73355795_A_G
##brain Gene_EXP:ATL2 3_38112112_T_G
##brain Gene_EXP:PTRF 13_113159942_A_G,10_11921140_T_G,6_30705792_T_G,12_57178583_A_C,8_7290003_A_C
##brain Gene_EXP:H3F3B 13_113325635_A_G
##brain Gene_EXP:ATL3 13_113159942_A_G
##brain Gene_EXP:HAUS1 19_9566733_T_G
##brain Gene_EXP:PTRF 13_113159942_A_G,10_11921140_T_G,6_30705792_T_G,8_7290003_A_C,5_181155466_T_G
##brain Gene_EXP:ATP2A2 13_113159942_A_G
##brain Gene_EXP:HBQ1 8_7290003_A_C
##brain Gene_EXP:ATP2B4 1_12001708_A_G,1_15381304_A_C
##brain Gene_EXP:HCP5 11_12162199_T_G
##brain Gene_EXP:PTRF 13_113159942_A_G,10_11921140_T_G,8_7290003_A_C,6_30705792_T_G,5_181155466_T_G
##brain Gene_EXP:ATP5B 1_54243266_A_G,6_31966660_T_G
##brain Gene_EXP:HDAC2 14_55169342_TAAA_T,17_55774876_T_G,11_65547388_T_G,7_108023984_G_A,15_75524142_T_C
##brain Gene_EXP:ATP6V0E1 11_12162199_T_G,12_40313960_G_T,15_43211582_A_C
##brain Gene_EXP:PTRF 6_30705792_T_G,12_57178583_A_C,8_122952205_T_G,11_94082585_T_C,13_113159942_A_G
##brain Gene_EXP:ATXN7L3B 15_65451964_A_G,2_108507561_T_G,12_57062993_T_G,2_113934259_C_T,1_213007133_T_G
##brain Gene_EXP:HDLBP 7_44964464_T_C,7_45064532_G_A
##brain Gene_EXP:PTRF 6_30705792_T_G,8_122952205_T_G,12_57178583_A_C,11_94082585_T_C,13_113159942_A_G
##brain Gene_EXP:HEG1 1_54243266_A_G,11_12162199_T_G
##brain Gene_EXP:ATXN7L3B 15_65451964_A_G,2_108507561_T_G,12_57062993_T_G,2_113934259_C_T,5_181155466_T_G
##brain Gene_EXP:HEXB 11_12162199_T_G,11_65547388_T_G,15_75876091_T_G
##brain Gene_EXP:PTTG1IP 1_54243266_A_G,1_154331414_T_G,3_196782572_G_T,6_30642116_A_G,11_12162199_T_G
##brain Gene_EXP:HFM1 6_73622013_G_C,6_73635330_C_T,10_79312556_A_G,11_12162199_T_G,15_55340661_G_T
##brain Gene_EXP:ATXN7L3B 15_65451964_A_G,2_108507561_T_G,2_113934259_C_T,12_57062993_T_G,5_181155466_T_G
##brain Gene_EXP:PUM2 19_3281403_A_C
##brain Gene_EXP:HIC2 13_98390168_T_C,5_181155466_T_G,8_7290003_A_C,1_54243266_A_G,14_67381608_G_T
##brain Gene_EXP:AVEN 16_15022595_T_G,5_36255453_A_T,10_50311228_T_G,7_75422659_A_G,14_24437182_T_G
##brain Gene_EXP:PUS7 11_65547388_T_G
##brain Gene_EXP:PVRL2 11_12162199_T_G,13_113159942_A_G
##brain Gene_EXP:HIC2 2_27774175_G_T,10_11921140_T_G,1_54243266_A_G,8_7290003_A_C,13_113325635_A_G
##brain Gene_EXP:AXL 10_11921140_T_G
##brain Gene_EXP:PWWP2B 9_37887606_C_T
##brain Gene_EXP:B2M 3_128945112_G_A,X_2856636_A_C,20_42084724_T_C,13_113325635_A_G,12_6818898_A_C
##brain Gene_EXP:HIC2 2_27774175_G_T,10_11921140_T_G,13_113325635_A_G,8_7290003_A_C,5_181155466_T_G
##brain Gene_EXP:PXDC1 7_159142364_T_G,11_65547388_T_G,13_113159942_A_G
##brain Gene_EXP:RAB11FIP4 12_124473081_C_T,13_113159942_A_G,17_76040867_A_G
##brain Gene_EXP:B3GNT9 7_108023984_G_A,11_65547388_T_G,15_66561152_T_G,17_55774876_T_G
##brain Gene_EXP:HIST1H3F 4_88731303_A_G,9_35398502_T_G
##brain Gene_EXP:HIST3H2A 10_11921140_T_G,16_18379704_T_G,20_16044565_T_G
##brain Gene_EXP:RAB23 13_113325635_A_G
##brain Gene_EXP:B4GALT1 11_65547388_T_G,13_113159942_A_G
##brain Gene_EXP:HIST3H3 7_72830875_T_G
##brain Gene_EXP:RAB27A 1_150261398_T_G,7_108023984_G_A,7_108024001_C_T,16_20737706_A_C,12_6818898_A_C
##brain Gene_EXP:BAI3 6_30705792_T_G,13_113159942_A_G
##brain Gene_EXP:HMG20B 1_150261398_T_G,16_18379704_T_G
##brain Gene_EXP:BAZ1A 15_65451964_A_G
##brain Gene_EXP:RAB27A 7_108023984_G_A,1_150261398_T_G,7_108024001_C_T,16_20737706_A_C,12_6818898_A_C
##brain Gene_EXP:HMGB1 16_72119226_C_G
##brain Gene_EXP:BCAR3 7_108023984_G_A,10_390794_C_G,11_62576120_A_C,16_18379704_T_G,17_55774876_T_G
##brain Gene_EXP:HMGB2 1_12001708_A_G,5_181155466_T_G,8_2963284_T_G,19_9566733_T_G
##brain Gene_EXP:RAB31 7_72942379_A_C
##brain Gene_EXP:BCCIP 1_219979389_T_A,19_11402175_A_C
##brain Gene_EXP:RAB32 11_12162199_T_G,12_6818898_A_C
##brain Gene_EXP:HMGCL 1_16589114_C_T
##brain Gene_EXP:BCL7A 10_11921140_T_G,11_12162199_T_G,13_113159942_A_G
##brain Gene_EXP:RAB3A 1_149852603_A_G,1_150261398_T_G,15_75293000_T_G,16_15664675_G_T,13_113325635_A_G
##brain Gene_EXP:HMGCR 16_1817242_T_C
##brain Gene_EXP:BCL9L 12_51745916_T_G
##brain Gene_EXP:HMOX1 12_51745916_T_G
##brain Gene_EXP:BCLAF1 11_65547388_T_G
##brain Gene_EXP:RAB3C 8_7290003_A_C,10_11921140_T_G
##brain Gene_EXP:HNRNPA0 16_55415_T_G,17_55774876_T_G
##brain Gene_EXP:BEAN1 10_79510669_A_AG,10_80249658_G_GC
##brain Gene_EXP:RAN 10_11921140_T_G,19_3281403_A_C
##brain Gene_EXP:HNRNPA1L2 2_113934259_C_T,5_181155466_T_G,7_72942379_A_C,12_40313960_G_T,12_51745916_T_G
##brain Gene_EXP:BEND3 15_75524142_T_C,15_75876091_T_G
##brain Gene_EXP:RANBP1 6_30705792_T_G
##brain Gene_EXP:BEND4 1_150261398_T_G,6_37022626_A_C,2_237368621_T_G,5_181155466_T_G,12_6818898_A_C
##brain Gene_EXP:RANBP17 20_42084724_T_C
##brain Gene_EXP:HNRNPC 14_55169342_TAAA_T,17_74350765_T_G,1_108718913_T_G,17_40348252_T_G,19_9566733_T_G
##brain Gene_EXP:RANBP2 1_16589114_C_T,11_65547388_T_G,15_55329691_T_C
##brain Gene_EXP:BEND4 6_37022626_A_C,1_150261398_T_G,2_237368621_T_G,5_181155466_T_G,12_6818898_A_C
##brain Gene_EXP:HNRNPC 14_55169342_TAAA_T,2_169735166_A_C,19_9566733_T_G,5_181155466_T_G,1_108718913_T_G
##brain Gene_EXP:RAP1GAP2 9_69516199_A_C,11_12162199_T_G,12_112962678_A_C,13_113159942_A_G
##brain Gene_EXP:BEND6 10_50311228_T_G,17_41725799_T_G
##brain Gene_EXP:HNRNPH3 1_228244520_T_G,14_55169342_TAAA_T
##brain Gene_EXP:RAP2C 19_4911043_A_C
##brain Gene_EXP:BHLHB9 2_224001670_G_A,2_224001859_C_A,3_128908109_T_C,3_128908178_A_G,13_113159942_A_G
##brain Gene_EXP:HNRNPU 15_65451964_A_G
##brain Gene_EXP:RARRES3 1_213007133_T_G,12_40313960_G_T,16_87644643_G_A
##brain Gene_EXP:HNRPDL 17_55774876_T_G
##brain Gene_EXP:RASL11B 1_220067324_T_G,5_181155466_T_G,9_126483890_T_G,11_73355795_A_G
##brain Gene_EXP:BHLHE40 11_12162199_T_G,7_72942379_A_C,14_93183653_A_C,8_122952205_T_G,6_30705792_T_G
##brain Gene_EXP:HOXD8 20_42084724_T_C
##brain Gene_EXP:RAX 14_64951601_A_C
##brain Gene_EXP:HPCAL4 12_123194624_A_ATT
##brain Gene_EXP:BHLHE40 11_12162199_T_G,8_122952205_T_G,6_30705792_T_G,14_93183653_A_C,8_7290003_A_C
##brain Gene_EXP:RBFOX1 1_213007133_T_G
##brain Gene_EXP:HPDL 6_41770599_T_G,8_7290003_A_C
##brain Gene_EXP:BHLHE40 11_12162199_T_G,8_122952205_T_G,6_30705792_T_G,8_7290003_A_C,14_93183653_A_C
##brain Gene_EXP:RBMX 2_113934259_C_T
##brain Gene_EXP:HRH1 9_108900415_C_A
##brain Gene_EXP:RCAN1 2_66439901_A_C,7_159142364_T_G,8_7290003_A_C,11_65547388_T_G
##brain Gene_EXP:HRH3 3_128945112_G_A,6_33279455_T_G
##brain Gene_EXP:BHLHE40 8_7290003_A_C,11_12162199_T_G,8_122952205_T_G,6_30705792_T_G,14_93183653_A_C
##brain Gene_EXP:HS3ST4 3_128945112_G_A
##brain Gene_EXP:RECK 8_106761354_T_G,10_50311228_T_G
##brain Gene_EXP:HSF2 1_234373536_T_G,2_178663651_C_T,2_178689190_G_A,11_65547388_T_G,16_67878678_T_G
##brain Gene_EXP:BHLHE41 2_113934259_C_T
##brain Gene_EXP:REEP5 2_113934259_C_T,5_181155466_T_G,16_87644643_G_A
##brain Gene_EXP:BIRC2 12_51745916_T_G
##brain Gene_EXP:RELB 11_12162199_T_G
##brain Gene_EXP:HSPA5 1_165652085_TATTATC_T
##brain Gene_EXP:BLM 19_9566733_T_G
##brain Gene_EXP:REP15 12_121222019_A_C,2_134946094_C_T,X_130145432_T_G,3_100302035_G_T,11_73355795_A_G
##brain Gene_EXP:HSPD1 17_55774876_T_G
##brain Gene_EXP:BLVRB 15_20566681_C_G
##brain Gene_EXP:HSPG2 1_37703244_A_C,15_84241166_A_C
##brain Gene_EXP:BMP1 7_72942379_A_C,11_12162199_T_G,17_7797836_A_C
##brain Gene_EXP:REP15 12_121222019_A_C,5_141102658_A_C,X_130145432_T_G,3_123110887_T_G,15_84241166_A_C
##brain Gene_EXP:ICA1 1_451649_A_AG
##brain Gene_EXP:BMPR1B 1_451649_A_AG,15_101875991_T_TC
##brain Gene_EXP:IFI30 16_55415_T_G
##brain Gene_EXP:RETSAT 1_113900413_C_G,10_43200831_A_G
##brain Gene_EXP:BPTF 17_55774876_T_G
##brain Gene_EXP:IFI35 11_12162199_T_G,16_30953637_A_C
##brain Gene_EXP:RFC3 19_9566733_T_G
##brain Gene_EXP:BRCA1 1_1918090_A_G
##brain Gene_EXP:IFITM2 13_113159942_A_G
##brain Gene_EXP:RFX7 15_65451964_A_G
##brain Gene_EXP:BRD3 2_113934259_C_T
##brain Gene_EXP:IFITM3 7_149253814_T_G,8_27431326_A_G,13_113159942_A_G,16_1817242_T_C
##brain Gene_EXP:RGS3 2_241744700_T_C,2_241748788_C_T,2_241748877_C_T,2_241751260_G_A
##brain Gene_EXP:BSN 13_113159942_A_G,16_1817242_T_C
##brain Gene_EXP:BTD 9_89037986_T_G,17_55774876_T_G
##brain Gene_EXP:IFNAR1 16_259458_T_G,1_154331414_T_G,1_64663808_A_C,18_14183954_G_T,7_32543154_A_C
##brain Gene_EXP:RHBDF1 12_40313960_G_T
##brain Gene_EXP:BTN3A3 13_113159942_A_G,19_9566733_T_G
##brain Gene_EXP:RHOC 1_149852603_A_G,5_181155466_T_G,13_113159942_A_G,17_55774876_T_G
##brain Gene_EXP:IFNAR1 16_259458_T_G,1_154331414_T_G,1_64663808_A_C,19_7740447_T_G,15_84241166_A_C
##brain Gene_EXP:C11orf24 4_74038466_A_C,17_18282776_T_G,17_46038577_T_G
##brain Gene_EXP:C12orf10 10_73803641_A_G
##brain Gene_EXP:RHOG 5_427675_T_C,13_113159942_A_G,16_30398066_C_A,22_17727059_T_G,16_1817242_T_C
##brain Gene_EXP:IGF2R 1_149852603_A_G
##brain Gene_EXP:C12orf23 16_72119226_C_G
##brain Gene_EXP:IGFBP6 12_51745916_T_G
##brain Gene_EXP:C12orf29 4_173528913_A_G,10_79312556_A_G,12_40313960_G_T,15_65451964_A_G
##brain Gene_EXP:RIC3 2_224001670_G_A,2_224001859_C_A
##brain Gene_EXP:IGSF9 16_87644643_G_A,13_113325635_A_G,8_7290003_A_C,2_113934259_C_T,5_181155466_T_G
##brain Gene_EXP:RIN2 2_15474280_T_C,11_65547388_T_G
##brain Gene_EXP:C12orf44 12_16364060_G_A,8_72935904_A_T,15_79456813_C_T,12_96500996_C_A,15_40296801_A_G
##brain Gene_EXP:RIOK3 1_1918305_G_A,2_61492168_C_A,19_4679822_A_C
##brain Gene_EXP:IGSF9 16_87644643_G_A,5_181155466_T_G,12_6818898_A_C,13_113325635_A_G,8_7290003_A_C
##brain Gene_EXP:RIPK1 11_65547388_T_G,16_1817242_T_C,17_55774876_T_G,15_75268724_T_G,1_234373536_T_G
##brain Gene_EXP:C14orf93 20_42084724_T_C
##brain Gene_EXP:IL10RB 11_65547388_T_G
##brain Gene_EXP:C16orf59 19_9566733_T_G
##brain Gene_EXP:RNF111 1_237687398_C_T
##brain Gene_EXP:ILF3 15_65451964_A_G,2_113934259_C_T,5_181155466_T_G,7_72942379_A_C,8_7290003_A_C
##brain Gene_EXP:C16orf91 20_41357106_A_C
##brain Gene_EXP:RNF135 6_30705792_T_G
##brain Gene_EXP:C17orf53 2_131597280_C_G,17_6998597_A_C,19_39885857_T_G
##brain Gene_EXP:RNF144A 14_96362953_G_A
##brain Gene_EXP:ILF3 15_65451964_A_G,5_181155466_T_G,2_113934259_C_T,8_7290003_A_C,7_72942379_A_C
##brain Gene_EXP:C19orf10 16_72119226_C_G,16_72129067_G_T
##brain Gene_EXP:RNF157 10_11921140_T_G
##brain Gene_EXP:C19orf59 19_1095353_C_G,19_1095356_C_T
##brain Gene_EXP:ILF3 15_65451964_A_G,7_72942379_A_C,2_113934259_C_T,5_181155466_T_G,8_7290003_A_C
##brain Gene_EXP:RNF165 10_11921140_T_G,16_1817242_T_C
##brain Gene_EXP:C19orf66 16_87644643_G_A,X_2856636_A_C
##brain Gene_EXP:RNF181 16_30953637_A_C
##brain Gene_EXP:C1GALT1C1 19_7740447_T_G,19_4911043_A_C,9_126483890_T_G,1_54243266_A_G,10_73803641_A_G
##brain Gene_EXP:IMPAD1 2_27774175_G_T
##brain Gene_EXP:RNF216 2_230310834_T_C,2_230401046_T_C
##brain Gene_EXP:INA 13_113159942_A_G,16_1817242_T_C
##brain Gene_EXP:RNF44 8_12430448_C_T,10_11921140_T_G
##brain Gene_EXP:C1orf198 18_6985656_C_T
##brain Gene_EXP:INO80D 11_12162199_T_G
##brain Gene_EXP:RNH1 13_113159942_A_G,16_1817242_T_C
##brain Gene_EXP:C1orf74 12_40313960_G_T
##brain Gene_EXP:INTS2 20_42084724_T_C
##brain Gene_EXP:RNPC3 17_55774876_T_G,20_5501817_T_G
##brain Gene_EXP:C1QTNF4 2_108507561_T_G
##brain Gene_EXP:IPO9 12_51745916_T_G
##brain Gene_EXP:RPAIN 9_69516199_A_C,11_18089364_C_A
##brain Gene_EXP:C1R 13_113159942_A_G
##brain Gene_EXP:IQGAP1 3_128945112_G_A,5_181155466_T_G,8_122952205_T_G,13_113325635_A_G,19_9566733_T_G
##brain Gene_EXP:RPAP1 2_96842345_G_C
##brain Gene_EXP:C1S 12_40313960_G_T
##brain Gene_EXP:RPL13 20_42084724_T_C
##brain Gene_EXP:C22orf32 18_79527652_GAA_G,13_113159942_A_G,7_100797615_T_G,12_6818898_A_C,16_58525116_G_T
##brain Gene_EXP:IRF1 12_51745916_T_G,17_55774876_T_G
##brain Gene_EXP:RPL19 2_61492168_C_A
##brain Gene_EXP:IRF2 1_149852603_A_G,1_219979389_T_A
##brain Gene_EXP:RPL3 2_24067801_G_A
##brain Gene_EXP:C2orf43 7_108023984_G_A,12_109800676_G_A,19_3281403_A_C,20_42084724_T_C
##brain Gene_EXP:IRS1 12_51745916_T_G
##brain Gene_EXP:RPL32 8_12430448_C_T
##brain Gene_EXP:ISL1 7_72942379_A_C,11_12162199_T_G
##brain Gene_EXP:C2orf44 7_108023984_G_A,7_108024001_C_T,11_65547388_T_G,14_55169342_TAAA_T
##brain Gene_EXP:RPL37 11_12162199_T_G
##brain Gene_EXP:ITCH 1_451649_A_AG,1_13281477_A_G
##brain Gene_EXP:RPL37A 2_216423665_G_C,2_216432695_A_G,2_216438364_T_C,2_216498874_C_T,2_216500041_G_T
##brain Gene_EXP:ITGA11 1_156286332_T_G,2_36988742_C_T,5_145859657_A_G,11_12162199_T_G
##brain Gene_EXP:C4orf21 4_145110084_AT_A
##brain Gene_EXP:C4orf27 1_225257909_T_G,3_75669482_G_T
##brain Gene_EXP:RPL9 3_165019547_G_T,11_12162199_T_G,11_65547388_T_G,16_72788732_T_G
##brain Gene_EXP:ITGA3 5_181155466_T_G
##brain Gene_EXP:C4orf46 1_44804312_T_G
##brain Gene_EXP:ITGB5 1_234373536_T_G,2_154854926_A_C,11_65547388_T_G,17_55774876_T_G
##brain Gene_EXP:RPS11 4_145127510_C_T,8_12430448_C_T,17_28613683_A_C
##brain Gene_EXP:C6orf1 4_74038466_A_C
##brain Gene_EXP:RPS28 15_43578884_A_G,17_18282629_T_G
##brain Gene_EXP:CACNA1B 13_113159942_A_G,16_1817242_T_C,X_2856636_A_C
##brain Gene_EXP:ITPR3 20_33072178_T_G
##brain Gene_EXP:RPUSD4 15_75524142_T_C
##brain Gene_EXP:CACNA2D2 17_76472531_A_C
##brain Gene_EXP:JAKMIP1 6_33279455_T_G,13_113159942_A_G,16_1817242_T_C
##brain Gene_EXP:RRAS 2_113934259_C_T,11_12162199_T_G,13_113159942_A_G,16_18379704_T_G,17_55774876_T_G
##brain Gene_EXP:CALU 7_72942379_A_C
##brain Gene_EXP:JAKMIP2 11_90041068_C_G
##brain Gene_EXP:CAMKMT 3_165019547_G_T
##brain Gene_EXP:JPH4 12_40313960_G_T
##brain Gene_EXP:RRP7A 1_19243612_A_C
##brain Gene_EXP:CAMKV 3_128945112_G_A,13_113159942_A_G,16_1817242_T_C,20_42084724_T_C
##brain Gene_EXP:KANK1 11_12162199_T_G
##brain Gene_EXP:RSBN1 13_113159942_A_G
##brain Gene_EXP:KBTBD6 2_108507561_T_G,5_141478412_T_C,6_30705792_T_G,11_65547388_T_G,13_113159942_A_G
##brain Gene_EXP:RSRC2 11_43920052_A_C
##brain Gene_EXP:CAMSAP3 11_46894699_T_G
##brain Gene_EXP:RTKN2 6_73644452_C_T
##brain Gene_EXP:CAP2 1_152511746_A_C,11_43920052_A_C,1_119997159_T_G,9_34254427_T_G,X_24743203_T_G
##brain Gene_EXP:KCNC1 16_1817242_T_C,11_43920052_A_C,1_213007133_T_G,17_76472531_A_C,16_30953637_A_C
##brain Gene_EXP:RTN1 16_30953637_A_C
##brain Gene_EXP:CAPG 7_72942379_A_C,10_11921140_T_G,1_156286332_T_G,15_56464990_A_C,11_12162199_T_G
##brain Gene_EXP:RTP4 11_12162199_T_G,15_82519765_A_C,19_3281403_A_C
##brain Gene_EXP:KCNH2 5_38950065_A_T
##brain Gene_EXP:RUFY3 11_65547388_T_G
##brain Gene_EXP:KCNH8 2_169735166_A_C,3_100302035_G_T,7_72942379_A_C,20_62661184_C_T
##brain Gene_EXP:CAPG 7_72942379_A_C,10_11921140_T_G,15_56464990_A_C,11_12162199_T_G,20_45938939_T_G
##brain Gene_EXP:RUNDC3A 10_11921140_T_G,13_113159942_A_G
##brain Gene_EXP:KCNN4 8_7290003_A_C,10_11921140_T_G,1_15381304_A_C,5_181155466_T_G,20_45938939_T_G
##brain Gene_EXP:RUNX1 1_78629896_T_C,2_108507561_T_G,8_7290003_A_C,10_11921140_T_G
##brain Gene_EXP:CAPZB 8_109289769_T_C
##brain Gene_EXP:CASKIN1 10_11921140_T_G
##brain Gene_EXP:KCNN4 8_7290003_A_C,10_11921140_T_G,5_181155466_T_G,20_45938939_T_G,1_15381304_A_C
##brain Gene_EXP:RUNX2 11_12162199_T_G,15_75268724_T_G
##brain Gene_EXP:CASP1 12_40313960_G_T
##brain Gene_EXP:RUVBL1 1_247814785_G_A,1_247815694_A_G
##brain Gene_EXP:CASP4 12_51745916_T_G
##brain Gene_EXP:KCNN4 8_7290003_A_C,10_11921140_T_G,5_181155466_T_G,20_45938939_T_G,10_50311228_T_G
##brain Gene_EXP:S100A10 10_11921140_T_G
##brain Gene_EXP:CASP7 1_155709773_T_G,22_42212334_A_C
##brain Gene_EXP:S100A13 13_113159942_A_G,16_1817242_T_C,17_36608462_A_C,X_100585180_G_T
##brain Gene_EXP:KCNN4 8_7290003_A_C,5_181155466_T_G,20_45938939_T_G,10_11921140_T_G,10_50311228_T_G
##brain Gene_EXP:CAV1 12_51745916_T_G,13_39724512_C_T,17_81086334_C_G
##brain Gene_EXP:CBR3 3_128945112_G_A,22_22098988_G_T,8_7290003_A_C,8_30756677_T_G,12_6818898_A_C
##brain Gene_EXP:S100A2 11_65547388_T_G,17_55774876_T_G
##brain Gene_EXP:KCTD11 17_7797836_A_C,1_54243266_A_G,11_65547388_T_G,13_113159942_A_G,14_93183653_A_C
##brain Gene_EXP:S100A6 7_72942379_A_C,7_159142364_T_G,8_7290003_A_C,8_30756677_T_G,10_11921140_T_G
##brain Gene_EXP:CBR3 3_128945112_G_A,8_30756677_T_G,8_7290003_A_C,22_22098988_G_T,2_60761746_T_G
##brain Gene_EXP:KDELR3 16_72119226_C_G,16_72129067_G_T,16_72164743_G_A
##brain Gene_EXP:SAFB 8_7290003_A_C,10_11921140_T_G,13_113159942_A_G,14_55169342_TAAA_T
##brain Gene_EXP:KDM1A 1_26774532_T_C,5_181155466_T_G,22_42212334_A_C
##brain Gene_EXP:CBR3 3_128945112_G_A,8_7290003_A_C,8_30756677_T_G,12_6818898_A_C,2_60761746_T_G
##brain Gene_EXP:KDM2B 5_181155466_T_G,12_6818898_A_C
##brain Gene_EXP:SAMD9 5_181155466_T_G,8_7290003_A_C,11_12162199_T_G
##brain Gene_EXP:CBR4 17_55774876_T_G
##brain Gene_EXP:KDM3B 16_71745407_G_T,16_72119226_C_G,16_72129067_G_T,16_72164743_G_A
##brain Gene_EXP:SAMD9L 5_181155466_T_G,11_12162199_T_G,19_44784158_T_G
##brain Gene_EXP:CBX1 20_42084724_T_C
##brain Gene_EXP:SAMM50 17_76009153_A_C
##brain Gene_EXP:KHDRBS1 5_181155466_T_G,12_6818898_A_C
##brain Gene_EXP:CBX2 17_80352778_T_G,7_72942379_A_C,10_73803641_A_G
##brain Gene_EXP:SARDH 2_113934259_C_T
##brain Gene_EXP:KHSRP 2_54968084_G_A
##brain Gene_EXP:CBX5 2_113934259_C_T
##brain Gene_EXP:SART3 10_11921140_T_G,11_12162199_T_G
##brain Gene_EXP:KIAA0247 1_149852603_A_G,7_114630022_T_G,16_18379704_T_G,17_55774876_T_G,19_15191478_T_G
##brain Gene_EXP:CCDC107 11_1242476_T_G,20_62661184_C_T,16_259458_T_G,1_171541102_T_G,1_154331414_T_G
##brain Gene_EXP:SAT1 12_40313960_G_T
##brain Gene_EXP:SBDS 12_104756998_T_G
##brain Gene_EXP:KIAA1009 14_68291858_T_C
##brain Gene_EXP:CCDC107 16_259458_T_G,1_154331414_T_G,18_14183954_G_T,17_19414393_T_G,11_1242476_T_G
##brain Gene_EXP:SCAMP5 X_100585180_G_T
##brain Gene_EXP:KIAA1143 20_9407810_T_C
##brain Gene_EXP:SCN3B 13_113159942_A_G
##brain Gene_EXP:CCDC112 11_65547388_T_G,17_55774876_T_G
##brain Gene_EXP:KIAA1549 15_40855887_C_T,15_40855965_C_T,17_75834935_G_A
##brain Gene_EXP:SDAD1 2_190437403_T_G,14_96331387_G_A,15_82525003_A_C
##brain Gene_EXP:CCDC138 8_30756677_T_G,12_40313960_G_T,15_75524142_T_C
##brain Gene_EXP:KIDINS220 1_113549504_C_T,2_113934259_C_T
##brain Gene_EXP:SDC4 12_40313960_G_T,13_113159942_A_G
##brain Gene_EXP:CCDC41 9_86322936_ATTT_A,9_86345023_C_T
##brain Gene_EXP:KIF13A 10_79312556_A_G
##brain Gene_EXP:SDCCAG3 2_232406987_T_TACAC
##brain Gene_EXP:CCDC77 7_108023984_G_A
##brain Gene_EXP:KIF1A 9_69516199_A_C
##brain Gene_EXP:SEC24A 7_5308283_G_A,15_28382572_T_C
##brain Gene_EXP:CCDC80 10_50311228_T_G,16_72119226_C_G,16_72129067_G_T
##brain Gene_EXP:KIF1C 9_93293047_T_G,13_113159942_A_G,16_1817242_T_C,19_43359207_C_A
##brain Gene_EXP:SEC61A1 9_37887606_C_T
##brain Gene_EXP:CCNB1IP1 17_55774876_T_G
##brain Gene_EXP:SELRC1 12_40313960_G_T
##brain Gene_EXP:KIF21A 7_108023984_G_A
##brain Gene_EXP:CCNF 19_9566733_T_G
##brain Gene_EXP:SEMA4D 11_125626705_T_G
##brain Gene_EXP:KIF22 5_80744593_A_C,19_9566733_T_G
##brain Gene_EXP:CCNJ 1_234373536_T_G,14_55169342_TAAA_T
##brain Gene_EXP:SEMA4G 6_146733274_T_TA
##brain Gene_EXP:KIF26A 7_159142364_T_G,10_11921140_T_G
##brain Gene_EXP:CCNT1 1_197912561_T_G,5_115984518_A_T,8_98032165_T_G,15_65451964_A_G
##brain Gene_EXP:SEPHS1 2_113934259_C_T
##brain Gene_EXP:KIF5A 1_20724406_A_C,11_12162199_T_G,16_1817242_T_C
##brain Gene_EXP:CCT2 12_40313960_G_T
##brain Gene_EXP:SEPW1 2_61492168_C_A
##brain Gene_EXP:KLC1 6_30705792_T_G,9_35801627_T_G
##brain Gene_EXP:CCT3 1_16589114_C_T,1_146969331_G_A
##brain Gene_EXP:SERINC3 2_105307612_A_C
##brain Gene_EXP:KLF15 8_7259511_T_C,10_50311228_T_G
##brain Gene_EXP:CCT4 7_108023984_G_A
##brain Gene_EXP:SERPINB6 2_227062473_GT_G
##brain Gene_EXP:KLF6 12_95474188_T_G
##brain Gene_EXP:CCT7 12_40313960_G_T
##brain Gene_EXP:SERPINB8 17_55774876_T_G
##brain Gene_EXP:KLHL23 10_79312556_A_G,13_113159942_A_G,13_113325635_A_G
##brain Gene_EXP:CCT8 7_108023984_G_A,7_108024001_C_T,8_61583890_T_A
##brain Gene_EXP:SERPINE1 5_181155466_T_G,6_30705792_T_G,11_65547388_T_G,12_51745916_T_G,17_55774876_T_G
##brain Gene_EXP:KLHL3 3_10062127_TA_T
##brain Gene_EXP:CD109 10_11921140_T_G
##brain Gene_EXP:SERPINE2 7_72942379_A_C
##brain Gene_EXP:KLHL36 13_113159942_A_G
##brain Gene_EXP:CD151 1_54243266_A_G,11_12162199_T_G,1_234373536_T_G,6_158785582_A_C,15_84241166_A_C
##brain Gene_EXP:SERPING1 9_108900415_C_A,17_41725799_T_G
##brain Gene_EXP:KLHL8 1_150261398_T_G,13_113159942_A_G,6_56557393_C_T,15_84241166_A_C,5_181155466_T_G
##brain Gene_EXP:CD151 1_54243266_A_G,15_84241166_A_C,5_38950065_A_T,6_158785582_A_C,11_12162199_T_G
##brain Gene_EXP:SESN1 8_93815432_A_C
##brain Gene_EXP:LAMB2 12_40313960_G_T,17_7797836_A_C,19_1356451_T_G
[표 6]에 제시된 FRH 들이 해당 유전자(gene) 발현과의 상관도(P-value)를 산출한 결과가 아래 [표 7]에 정리되어있다.
또한, [표 6]에 제시된 FRH들이 포함되어 발현된 유전자들 증 주요 유전자와 각각의 brain(뇌종양) 약물과의 상관도(P-value)를 산출한 결과가 아래 도 27에 정리되어있다.
Correlation between gene expression and FRH
Gene pvalue(FRH-Gene_exp) Gene pvalue(FRH-Gene_exp) Gene pvalue(FRH-Gene_exp)
PTRF 2.02E-17 GNS 1.98E-10 KANK1 5.23E-09
MALT1 6.80E-17 SSBP3 2.01E-10 SPOCD1 5.27E-09
FAM117B 3.28E-16 TRMT61B 2.04E-10 FLNB 5.28E-09
OLFML2A 3.28E-16 VIM 2.07E-10 MFSD12 5.30E-09
CBX2 3.46E-16 FAM127A 2.10E-10 MOAP1 5.34E-09
ANXA1 5.90E-16 GPX8 2.11E-10 VPS72 5.37E-09
N4BP2 7.92E-16 HNRNPC 2.13E-10 IL10RB 5.43E-09
TNFRSF12A 8.20E-16 RPS29 2.13E-10 PAK7 5.43E-09
MYOF 2.02E-15 LRBA 2.17E-10 SNRNP200 5.45E-09
FAM129B 2.35E-15 LRIG1 2.18E-10 CD82 5.56E-09
ILF3 2.88E-15 ECSIT 2.19E-10 GLT25D1 5.64E-09
KLHL8 5.57E-15 NARS2 2.23E-10 ZNF704 5.68E-09
BHLHE40 5.57E-15 SAFB 2.24E-10 ARNTL2 5.71E-09
KCNN4 6.83E-15 MVP 2.27E-10 BCL9L 5.75E-09
EXT2 7.61E-15 ACTN2 2.27E-10 SLC39A13 5.77E-09
ITGA3 8.85E-15 P4HA1 2.28E-10 HNRNPA0 5.82E-09
GUF1 1.00E-14 ANP32A 2.28E-10 EIF2AK4 5.83E-09
GBE1 1.32E-14 CXXC4 2.33E-10 MYRIP 5.90E-09
HLA-B 1.35E-14 HLA-A 2.34E-10 DLK1 5.91E-09
ANXA2 1.43E-14 GATA2 2.38E-10 ACN9 5.97E-09
CD151 1.47E-14 SERPINB6 2.41E-10 MPST 5.98E-09
ACVR1B 1.51E-14 EPS8 2.42E-10 DDX20 5.99E-09
GADD45B 1.61E-14 MMD 2.48E-10 FTH1 6.02E-09
MYO1E 1.94E-14 FOSL2 2.48E-10 TNC 6.05E-09
WDR12 2.10E-14 KLF2 2.54E-10 NUP133 6.15E-09
KCNH8 2.12E-14 DAG1 2.60E-10 HNRNPA3 6.20E-09
ACTN4 2.19E-14 SRRM4 2.65E-10 ZNF572 6.20E-09
FLNA 2.48E-14 ZNF516 2.66E-10 TMEM33 6.27E-09
KCTD11 2.55E-14 CLIC1 2.67E-10 LRFN2 6.31E-09
NIPSNAP1 2.59E-14 TSEN54 2.75E-10 DDX55 6.31E-09
ADAM9 2.60E-14 RAB3C 2.78E-10 SPAST 6.45E-09
TAP1 2.95E-14 SPPL2A 2.81E-10 ADCYAP1R1 6.47E-09
PEA15 3.09E-14 GALNT10 2.82E-10 YTHDC1 6.49E-09
CREB3 3.12E-14 ZNF507 2.84E-10 GRIA4 6.52E-09
PLP2 3.80E-14 DOC2A 2.86E-10 TSSC1 6.58E-09
THBS1 3.98E-14 SPAG1 2.90E-10 PFKL 6.68E-09
DNMT3A 4.00E-14 DCBLD1 2.90E-10 UBE2H 6.73E-09
LAMP1 4.16E-14 PRDM1 2.92E-10 CKAP4 6.75E-09
LDHB 4.67E-14 TMEM145 2.95E-10 AKR7A2 6.77E-09
LAMB2 5.94E-14 SULT4A1 2.99E-10 UBE2N 6.77E-09
GTF3C3 6.40E-14 CCDC109B 3.01E-10 FASTKD1 6.82E-09
TRAM2 6.41E-14 TNFRSF1A 3.04E-10 TMEM151B 6.84E-09
PAX6 6.65E-14 SDC4 3.06E-10 NEU1 6.91E-09
CRIM1 7.47E-14 FAM120A 3.11E-10 UNC5B 6.97E-09
IFNAR1 7.80E-14 NAGK 3.19E-10 CLASP1 6.98E-09
ISL1 8.68E-14 CPD 3.25E-10 DLX6 7.14E-09
PRMT1 9.24E-14 RHOU 3.27E-10 PIEZO1 7.24E-09
FLII 9.70E-14 SCG3 3.28E-10 STXBP4 7.31E-09
SLC10A3 1.02E-13 COPS7B 3.33E-10 SLC16A4 7.31E-09
LIN28B 1.05E-13 KDM1A 3.33E-10 HNRNPH3 7.32E-09
FOSL1 1.23E-13 IGFBP6 3.43E-10 F3 7.33E-09
C1GALT1C1 1.38E-13 ELAVL3 3.44E-10 PAPOLG 7.34E-09
S100A6 1.43E-13 TUBA1C 3.47E-10 GNPAT 7.40E-09
KHDRBS1 1.47E-13 PION 3.49E-10 CTCF 7.59E-09
PRSS23 1.62E-13 HADHA 3.50E-10 CBX5 7.59E-09
DCBLD2 1.65E-13 STARD7 3.55E-10 TARS2 7.63E-09
B2M 1.89E-13 HSPG2 3.57E-10 SOX11 7.69E-09
UBE2A 2.16E-13 SLC16A2 3.57E-10 MAN2B2 7.70E-09
PATZ1 2.28E-13 WNK2 3.58E-10 NAA25 7.75E-09
ACTN1 2.81E-13 DTX3L 3.61E-10 MRPL48 7.78E-09
RAB27A 4.12E-13 DKK3 3.69E-10 TNFAIP3 7.80E-09
TACC1 4.16E-13 UBA7 3.73E-10 C11orf74 7.84E-09
RARRES3 4.25E-13 SLC22A23 3.79E-10 MRPL21 7.84E-09
ZNF74 4.34E-13 GPHN 3.80E-10 PNN 7.92E-09
MGAT4B 4.73E-13 PDE1C 3.85E-10 TBKBP1 7.94E-09
CD99 4.85E-13 MTPAP 3.87E-10 SQLE 8.00E-09
BMP1 4.95E-13 MOSPD2 3.87E-10 LCLAT1 8.07E-09
BEND4 5.02E-13 SYPL1 3.90E-10 FBL 8.11E-09
HIC2 5.07E-13 EPB41 3.98E-10 SMAD9 8.13E-09
PRICKLE2 5.29E-13 P4HA2 4.01E-10 LSM7 8.13E-09
ZBTB4 5.34E-13 NT5E 4.05E-10 PDE3B 8.14E-09
TPMT 6.11E-13 CFLAR 4.07E-10 PLS3 8.14E-09
MYLK 6.85E-13 EHD2 4.10E-10 TUFM 8.15E-09
MARCKSL1 7.18E-13 CCT3 4.11E-10 DNAJC12 8.25E-09
HEXB 7.48E-13 EFEMP1 4.17E-10 PHF21A 8.42E-09
PLEC 7.49E-13 HSPD1 4.19E-10 PARP9 8.43E-09
RIPK1 8.47E-13 CHD7 4.20E-10 CD109 8.44E-09
RPL3 9.02E-13 CMPK1 4.22E-10 LDLRAD3 8.60E-09
TRAP1 9.16E-13 COL4A1 4.29E-10 MYCN 8.62E-09
ATXN7L3B 9.25E-13 PHF21B 4.29E-10 GALNT5 8.65E-09
SMPD1 9.44E-13 CSRP1 4.36E-10 DPY30 8.68E-09
SERPINE1 9.54E-13 RPL38 4.37E-10 RNF144A 8.72E-09
TMED9 9.82E-13 CYR61 4.40E-10 PCYT1A 8.76E-09
CCDC88C 1.00E-12 TRIM22 4.44E-10 ATL2 8.80E-09
GPC1 1.04E-12 TRIP6 4.45E-10 FGFBP3 8.84E-09
AXL 1.06E-12 HNRPDL 4.47E-10 OCIAD1 8.89E-09
MICALL2 1.07E-12 LHFP 4.58E-10 LRRC16B 9.05E-09
LRRC8B 1.08E-12 MYL12B 4.70E-10 EPSTI1 9.15E-09
GLIPR1 1.19E-12 GRPEL2 4.72E-10 STOX2 9.24E-09
FKBP15 1.21E-12 RPL31 4.82E-10 PDE2A 9.25E-09
ATCAY 1.26E-12 SLC39A7 4.96E-10 C1R 9.31E-09
LOXL2 1.28E-12 FXYD5 5.01E-10 POLR2B 9.36E-09
DDX25 1.35E-12 SERPINB8 5.05E-10 SRSF2 9.43E-09
STK17A 1.38E-12 SYTL2 5.06E-10 AGTPBP1 9.43E-09
CCDC107 1.41E-12 TEX15 5.17E-10 KIF13A 9.46E-09
TGOLN2 1.43E-12 INA 5.20E-10 FAM57B 9.46E-09
ACOT9 1.47E-12 COG2 5.28E-10 CELF3 9.49E-09
SQSTM1 1.51E-12 CCNT1 5.37E-10 PRPF40A 9.64E-09
VASH2 1.51E-12 PLOD2 5.40E-10 NEFH 9.77E-09
EHD4 1.53E-12 CHST7 5.44E-10 CABYR 9.84E-09
EIF3L 1.56E-12 PDCD1LG2 5.53E-10 CIAPIN1 9.84E-09
SORCS1 1.64E-12 NDP 5.57E-10 AHNAK2 9.95E-09
SPARC 1.66E-12 PXN 5.57E-10 MTX2 1.01E-08
HRCT1 1.66E-12 ZSCAN2 5.63E-10 C12orf29 1.01E-08
SNRPF 1.86E-12 FAM114A1 5.63E-10 SLC7A2 1.02E-08
MYBL1 1.95E-12 CNTFR 5.64E-10 LRRFIP2 1.02E-08
CCNB1IP1 2.01E-12 TCF20 5.96E-10 PAICS 1.02E-08
CD99L2 2.02E-12 BRD3 5.97E-10 GABRB3 1.04E-08
TAPBP 2.07E-12 UBE2O 6.08E-10 TCERG1 1.05E-08
SAT1 2.14E-12 IFITM3 6.19E-10 COL6A2 1.05E-08
RNF44 2.20E-12 SMARCA5 6.21E-10 TAF5 1.05E-08
ESYT2 2.24E-12 CERCAM 6.35E-10 PDE7A 1.06E-08
KIF1C 2.24E-12 CASP1 6.37E-10 ATL3 1.07E-08
FAM20C 2.29E-12 ELAVL4 6.40E-10 CAMSAP1 1.07E-08
ELL2 2.32E-12 DNAAF2 6.41E-10 FSD1 1.07E-08
NCEH1 2.45E-12 ACTL6B 6.42E-10 TMCO4 1.07E-08
PLAUR 2.57E-12 RAB32 6.42E-10 TSPAN7 1.08E-08
NQO2 2.73E-12 GBA 6.58E-10 GPX1 1.08E-08
C14orf93 2.78E-12 EIF3H 6.59E-10 ARC 1.08E-08
MTF2 2.83E-12 PHB2 6.65E-10 FKBP5 1.08E-08
PPIC 2.93E-12 SH2D3C 6.80E-10 ABAT 1.09E-08
CD70 2.95E-12 C1orf43 6.81E-10 EIF4ENIF1 1.11E-08
S100A16 2.96E-12 H3F3B 7.08E-10 FAU 1.11E-08
TFAP4 3.03E-12 C16orf88 7.12E-10 HSPA5 1.12E-08
HIST1H3F 3.03E-12 BAI3 7.32E-10 DOK4 1.14E-08
NOL11 3.05E-12 TMEM184B 7.35E-10 B3GNT9 1.14E-08
NSL1 3.10E-12 ZNF711 7.36E-10 TOR1B 1.14E-08
SUMF1 3.21E-12 GRASP 7.40E-10 CELF1 1.15E-08
PXDC1 3.25E-12 GAS6 7.51E-10 FAM89A 1.15E-08
GTF3C2 3.37E-12 HFM1 7.61E-10 RBM12B 1.17E-08
LIMD2 3.50E-12 KCNH2 7.78E-10 P4HB 1.17E-08
GSN 3.51E-12 XPO5 7.84E-10 ENO3 1.18E-08
GNAI2 3.55E-12 TAX1BP3 7.91E-10 ZNF638 1.18E-08
SMARCA4 3.60E-12 CLCN5 7.93E-10 AGBL5 1.19E-08
WHAMM 3.60E-12 PRR5L 7.99E-10 NAALAD2 1.19E-08
DRAM1 3.85E-12 CHPF 8.03E-10 GTPBP3 1.22E-08
CAST 3.86E-12 C9orf72 8.10E-10 ARSJ 1.23E-08
ARID2 4.07E-12 PDZD11 8.10E-10 NDEL1 1.24E-08
HLA-E 4.10E-12 FAM161A 8.16E-10 SEMA6A 1.28E-08
CAPN2 4.10E-12 SNRNP35 8.31E-10 KDM2B 1.28E-08
GLIS3 4.34E-12 IL13RA1 8.58E-10 ARNTL 1.29E-08
MAP4 4.38E-12 BCL2 8.60E-10 CCNJ 1.29E-08
BCL6 4.47E-12 FBXO32 8.62E-10 DPYD 1.29E-08
NLRC5 4.74E-12 CNTNAP2 8.68E-10 XRCC5 1.31E-08
SLC46A3 4.78E-12 LMAN2 8.68E-10 NTRK1 1.31E-08
TRIM56 4.85E-12 RIPPLY2 8.71E-10 EML5 1.32E-08
ATP5B 4.92E-12 BEND3 8.78E-10 DUSP12 1.32E-08
RHOC 4.93E-12 ITGAV 8.81E-10 HSP90AB1 1.33E-08
MAN1B1 5.08E-12 LIAS 8.81E-10 MDM4 1.34E-08
ABCC3 5.12E-12 PDGFA 9.01E-10 EWSR1 1.35E-08
GBP1 5.17E-12 EMP3 9.07E-10 SLC26A10 1.37E-08
CEP44 5.31E-12 WWTR1 9.10E-10 HDGF 1.39E-08
COTL1 5.37E-12 HTRA1 9.20E-10 MRPS25 1.39E-08
HEG1 5.75E-12 MPHOSPH10 9.33E-10 EMP1 1.40E-08
CCDC138 5.75E-12 CAP2 9.35E-10 QSOX1 1.40E-08
CSRNP3 5.76E-12 SH3BGRL 9.41E-10 TFAP2A 1.42E-08
GINM1 5.87E-12 TSPAN4 9.48E-10 NRXN2 1.43E-08
CD44 6.04E-12 RSRC2 9.72E-10 ATOH7 1.46E-08
PDSS1 6.17E-12 APOL2 9.77E-10 TRMT1 1.47E-08
TWSG1 6.41E-12 SFSWAP 9.82E-10 SLC26A6 1.48E-08
CST3 6.71E-12 DPF1 9.89E-10 STK38 1.48E-08
RAB11FIP5 6.75E-12 MRC2 1.00E-09 PHLDB2 1.48E-08
SYNJ2 6.87E-12 ITGB1 1.01E-09 CEP72 1.50E-08
PIGB 7.16E-12 CALU 1.01E-09 IFIT3 1.51E-08
PML 7.19E-12 SLC9A7 1.01E-09 PLEKHF1 1.51E-08
ACVR2B 7.23E-12 ARF4 1.02E-09 DDX21 1.52E-08
BCL7A 7.27E-12 PPAP2A 1.02E-09 RAX 1.52E-08
LY96 7.38E-12 GCNT1 1.02E-09 IER5L 1.52E-08
B4GALT1 7.40E-12 GPR125 1.03E-09 AIG1 1.53E-08
FSTL1 7.41E-12 ACADVL 1.03E-09 LACTB 1.53E-08
MAGT1 7.55E-12 EFR3A 1.04E-09 SLC2A10 1.54E-08
HNRNPA1L2 7.81E-12 DLL3 1.04E-09 UAP1 1.54E-08
GRAMD3 8.21E-12 RCOR2 1.04E-09 IRAK1BP1 1.54E-08
RPL37 8.30E-12 ITPR3 1.07E-09 LGALS1 1.55E-08
POU2F1 8.67E-12 NVL 1.08E-09 FBRSL1 1.56E-08
MID1 8.77E-12 SLC5A6 1.09E-09 LAYN 1.58E-08
TGFB1I1 8.79E-12 TMEM158 1.09E-09 MKI67IP 1.59E-08
OPTN 8.90E-12 MDN1 1.10E-09 ARID5B 1.59E-08
KLHL23 9.08E-12 YEATS4 1.16E-09 RPL30 1.59E-08
RUNX1 9.21E-12 NR3C1 1.17E-09 VPS13D 1.59E-08
DAP 9.95E-12 TREX1 1.18E-09 CHGA 1.59E-08
PARP1 1.02E-11 CHST14 1.19E-09 ATP2B4 1.59E-08
FOXN2 1.04E-11 FKBP4 1.21E-09 PRKD1 1.59E-08
PPAT 1.06E-11 HOXB3 1.21E-09 USP6NL 1.60E-08
KIF1A 1.06E-11 ITGB5 1.22E-09 S100A11 1.60E-08
DDO 1.07E-11 LUC7L3 1.22E-09 FOXG1 1.62E-08
PODXL2 1.10E-11 DLG1 1.23E-09 RAVER2 1.62E-08
CAPG 1.18E-11 DHX36 1.23E-09 MTUS1 1.63E-08
CIB1 1.20E-11 ZNF689 1.24E-09 SULT1C4 1.65E-08
ALKBH2 1.22E-11 PKM 1.26E-09 PELI1 1.66E-08
ATG4A 1.22E-11 LDLRAP1 1.26E-09 TMEM97 1.66E-08
TLN1 1.23E-11 RPRD2 1.27E-09 NFIC 1.69E-08
NUCB2 1.25E-11 C1QTNF4 1.27E-09 ZNF607 1.69E-08
CEP68 1.29E-11 PDCD4 1.28E-09 MX1 1.73E-08
PLK2 1.29E-11 ST6GAL1 1.29E-09 VASP 1.73E-08
FAM111A 1.30E-11 ZNF397 1.29E-09 METTL21A 1.73E-08
TMEM50B 1.30E-11 CCAR1 1.32E-09 RPS11 1.75E-08
RAB3A 1.31E-11 CNBP 1.32E-09 EPHA7 1.76E-08
CEP95 1.33E-11 SRPX 1.34E-09 PMS1 1.80E-08
C15orf52 1.34E-11 OSTM1 1.34E-09 CNNM4 1.80E-08
PA2G4 1.40E-11 WHSC2 1.36E-09 IFITM10 1.81E-08
S100A10 1.53E-11 GREB1 1.41E-09 RAP1GAP2 1.82E-08
SAMD9L 1.56E-11 PVR 1.43E-09 MAP2K7 1.83E-08
PTTG1IP 1.59E-11 R3HDM1 1.43E-09 GAL3ST3 1.85E-08
PFKM 1.61E-11 BAG3 1.45E-09 MESDC1 1.85E-08
TMCO3 1.61E-11 RHOA 1.45E-09 SCN3B 1.85E-08
LPP 1.65E-11 SNRPA 1.46E-09 FAM120C 1.86E-08
SMIM3 1.68E-11 RAB23 1.47E-09 SRSF12 1.86E-08
NYNRIN 1.69E-11 IPO9 1.48E-09 ZNF382 1.89E-08
TET1 1.71E-11 TAGLN2 1.49E-09 KIFC3 1.96E-08
HLA-C 1.72E-11 ERAP2 1.49E-09 KANSL2 1.99E-08
OSBPL3 1.75E-11 MRFAP1L1 1.51E-09 SDCBP 2.00E-08
CENPV 1.77E-11 NKAIN1 1.52E-09 AFMID 2.03E-08
CTSA 1.78E-11 HDAC2 1.53E-09 PPP1R13L 2.04E-08
MYH9 1.78E-11 PCGF5 1.55E-09 GPD2 2.04E-08
THAP9 1.82E-11 MATR3 1.56E-09 C19orf10 2.07E-08
PRR3 1.85E-11 CEBPZ 1.56E-09 IL1RAP 2.08E-08
ACP1 1.88E-11 TNFSF10 1.56E-09 HIST1H4C 2.09E-08
SLC6A15 1.89E-11 PRNP 1.56E-09 SHPRH 2.13E-08
MLLT10 1.96E-11 MAST1 1.59E-09 LIF 2.15E-08
MTM1 1.97E-11 CDH13 1.59E-09 TADA1 2.16E-08
RAN 2.13E-11 DDC 1.59E-09 FAM69B 2.17E-08
TMEM9B 2.16E-11 ANXA7 1.60E-09 SLC6A2 2.18E-08
MT2A 2.20E-11 HBQ1 1.61E-09 DDX58 2.18E-08
SHF 2.21E-11 SH2D4A 1.61E-09 SDF4 2.19E-08
CNN2 2.28E-11 FLVCR1 1.62E-09 GPR19 2.19E-08
IQGAP1 2.32E-11 BACE2 1.65E-09 DCP2 2.19E-08
CRAT 2.35E-11 SETDB1 1.65E-09 PRCC 2.20E-08
LATS2 2.38E-11 LMNA 1.66E-09 ASNSD1 2.22E-08
ZBTB39 2.41E-11 NRSN1 1.67E-09 LRP11 2.25E-08
DYNLT3 2.46E-11 LYST 1.69E-09 EPDR1 2.31E-08
PSMB8 2.46E-11 ARID3A 1.72E-09 HN1 2.31E-08
LRPPRC 2.48E-11 C1orf61 1.72E-09 CAMK2B 2.32E-08
MAPT 2.50E-11 EFHD2 1.73E-09 C12orf75 2.33E-08
NEXN 2.50E-11 EDIL3 1.74E-09 CLNS1A 2.33E-08
CD63 2.53E-11 RPL9 1.75E-09 SLC38A6 2.34E-08
ZNF195 2.55E-11 CDK2AP2 1.75E-09 ZNF646 2.36E-08
PSMB9 2.56E-11 UBASH3B 1.80E-09 PRPF38B 2.39E-08
NOP58 2.57E-11 MED28 1.81E-09 RSBN1 2.40E-08
TTC5 2.60E-11 RUNDC3A 1.82E-09 TMEM206 2.43E-08
REEP5 2.61E-11 PDIA2 1.82E-09 CYBASC3 2.43E-08
TIMP1 2.63E-11 DTNB 1.83E-09 MICB 2.44E-08
PINK1 2.65E-11 PHACTR3 1.83E-09 CRTAP 2.46E-08
RUNX2 2.65E-11 ILF2 1.84E-09 IRS1 2.48E-08
NNMT 2.76E-11 RSL1D1 1.85E-09 GLCCI1 2.49E-08
DHX15 2.89E-11 HMGB2 1.88E-09 VCL 2.50E-08
HRH1 2.92E-11 ATP5G2 1.90E-09 PANK1 2.50E-08
NEK6 2.94E-11 GLB1L2 1.91E-09 GSDMD 2.50E-08
NUP35 3.01E-11 SURF4 1.92E-09 ST8SIA3 2.51E-08
CCT2 3.04E-11 IRF1 1.92E-09 SGMS2 2.55E-08
COX7A2L 3.18E-11 ZC3H8 1.93E-09 ISYNA1 2.55E-08
RNF165 3.35E-11 AKIP1 1.95E-09 ATP2B3 2.55E-08
ANKRD46 3.49E-11 PLEKHM1 1.96E-09 RD3 2.57E-08
CTGF 3.51E-11 GNB5 2.03E-09 GLTPD1 2.58E-08
C22orf32 3.55E-11 CLIC4 2.06E-09 DOPEY2 2.58E-08
SAMD9 3.58E-11 BTD 2.07E-09 C5orf46 2.60E-08
SMCR7L 3.59E-11 BSN 2.08E-09 NDUFAF4 2.61E-08
CHD4 3.65E-11 VAMP5 2.09E-09 HSPE1 2.62E-08
BPTF 3.69E-11 FAM168B 2.09E-09 PQLC3 2.65E-08
APEX1 3.81E-11 WDR33 2.10E-09 GTPBP1 2.65E-08
PAM 3.91E-11 RANBP17 2.11E-09 TOM1L2 2.66E-08
AHCY 4.00E-11 CHRNA3 2.13E-09 FAP 2.68E-08
WDR1 4.08E-11 STEAP3 2.13E-09 EPT1 2.70E-08
CAV1 4.08E-11 B4GALT7 2.14E-09 TAGLN 2.70E-08
IGSF9 4.15E-11 KIF26A 2.14E-09 NSMCE4A 2.71E-08
GDPD1 4.19E-11 RNPS1 2.16E-09 SQRDL 2.72E-08
SHISA4 4.29E-11 PPIG 2.18E-09 MYB 2.74E-08
EPHA2 4.33E-11 NIPAL3 2.19E-09 MDH1 2.75E-08
CCT7 4.41E-11 FNDC3B 2.20E-09 TGFB1 2.76E-08
SRPX2 4.42E-11 PDE4DIP 2.20E-09 PSMB5 2.77E-08
SYT1 4.42E-11 MICAL2 2.20E-09 UNC80 2.78E-08
ANXA4 4.49E-11 CALD1 2.22E-09 CREB3L4 2.81E-08
SLC29A3 4.52E-11 SH3GLB1 2.25E-09 TFCP2 2.83E-08
CTSO 4.66E-11 RLTPR 2.26E-09 KCNT2 2.91E-08
ATP6V0E1 4.77E-11 SNAP23 2.28E-09 BHLHE41 2.91E-08
CBR4 4.77E-11 SNX22 2.28E-09 CHCHD6 2.95E-08
PLIN3 4.77E-11 BAZ2A 2.30E-09 SWAP70 2.97E-08
LEPREL1 4.88E-11 BCOR 2.31E-09 RPL13 2.98E-08
LAMP2 5.05E-11 ADNP 2.35E-09 RRN3 3.03E-08
PLOD1 5.07E-11 LEPRE1 2.36E-09 DAB2IP 3.05E-08
CASKIN1 5.12E-11 RPS15A 2.37E-09 TMEM107 3.06E-08
CUX2 5.14E-11 PNMA3 2.41E-09 SNRPD1 3.08E-08
CRABP1 5.28E-11 CAMKMT 2.43E-09 BIRC3 3.10E-08
SLC22A4 5.34E-11 FGFRL1 2.45E-09 SOX4 3.10E-08
ANXA5 5.44E-11 SFPQ 2.46E-09 CYLD 3.11E-08
TIGD1 5.45E-11 STMN4 2.47E-09 ABHD2 3.11E-08
CBR3 5.64E-11 PTGR1 2.53E-09 FCHO1 3.11E-08
FAM163A 5.73E-11 SUV39H2 2.53E-09 CC2D1B 3.12E-08
LGALS3 5.82E-11 SUCLG2 2.59E-09 FYCO1 3.13E-08
TOMM20 5.91E-11 NSUN6 2.61E-09 SLC29A4 3.13E-08
WASF1 6.11E-11 TOMM22 2.62E-09 ARHGAP19 3.15E-08
SLC25A43 6.19E-11 EBF3 2.65E-09 SSRP1 3.16E-08
H2AFY2 6.20E-11 TRADD 2.71E-09 TRAM1 3.20E-08
FAM126A 6.32E-11 EPHX1 2.71E-09 C1S 3.20E-08
SMARCAD1 6.33E-11 DNASE2 2.72E-09 IL6ST 3.21E-08
CACNA1B 6.38E-11 FICD 2.76E-09 CASP4 3.25E-08
RCAN1 6.71E-11 DCAF16 2.79E-09 PARP12 3.25E-08
SELRC1 6.78E-11 MYT1L 2.79E-09 RGS3 3.27E-08
C2orf44 6.81E-11 MOCS2 2.83E-09 METTL14 3.30E-08
UBA52 6.90E-11 SF3B1 2.84E-09 KHSRP 3.31E-08
RTP4 6.98E-11 MMP14 2.85E-09 PCBP3 3.31E-08
UEVLD 7.01E-11 ZNF708 2.87E-09 NEFM 3.31E-08
TLR4 7.11E-11 TBC1D8B 2.89E-09 RBM33 3.35E-08
MRPL44 7.12E-11 RHBDF1 2.90E-09 LASP1 3.40E-08
RRAS 7.27E-11 CEP170 2.90E-09 RASA3 3.42E-08
SOAT1 7.28E-11 AMMECR1L 2.93E-09 ATP11B 3.43E-08
ICA1 7.30E-11 SLC31A2 2.94E-09 BTN3A2 3.44E-08
MOXD1 7.30E-11 PPP1CC 2.95E-09 MAB21L2 3.45E-08
KLF15 7.34E-11 ATP8A1 2.96E-09 GNG4 3.45E-08
NEDD4 7.36E-11 STX4 2.98E-09 ZRANB3 3.48E-08
MBOAT7 7.54E-11 WDR86 2.99E-09 LAMC1 3.48E-08
ORC4 7.61E-11 PALLD 3.01E-09 POLB 3.49E-08
MR1 7.64E-11 COQ10B 3.07E-09 LMF2 3.49E-08
UTRN 7.74E-11 ZNF627 3.12E-09 CECR5 3.52E-08
NKX3-1 7.77E-11 FADS3 3.12E-09 MAP2K3 3.52E-08
MBTD1 8.15E-11 IFI35 3.15E-09 FBXO45 3.53E-08
STIM1 8.18E-11 TAF3 3.16E-09 AMIGO2 3.53E-08
RASL11B 8.36E-11 G6PD 3.18E-09 RAB11FIP4 3.54E-08
CAMKV 8.53E-11 FUZ 3.20E-09 MRPL10 3.58E-08
CTSB 8.63E-11 COL5A1 3.22E-09 ONECUT2 3.59E-08
TPP1 8.95E-11 ZFP36L1 3.22E-09 NLRX1 3.59E-08
OSGEPL1 9.14E-11 NDUFB9 3.24E-09 ADAM10 3.65E-08
ST6GALNAC3 9.31E-11 PHF5A 3.25E-09 MEX3B 3.65E-08
ERBB2IP 9.34E-11 DPH5 3.27E-09 HMX1 3.70E-08
ZC3H15 9.38E-11 BCAR3 3.31E-09 SH3RF2 3.70E-08
FUCA1 9.39E-11 E2F6 3.31E-09 LINC00346 3.70E-08
MYO1C 9.54E-11 CELF5 3.37E-09 NELL2 3.71E-08
F8 9.81E-11 CMTM6 3.42E-09 KDM3B 3.74E-08
ALPK2 9.87E-11 COL4A2 3.43E-09 NRARP 3.74E-08
INO80D 9.88E-11 RRBP1 3.45E-09 CSTB 3.76E-08
PTP4A3 9.93E-11 NIF3L1 3.46E-09 KATNB1 3.78E-08
PDP1 1.06E-10 UBE2T 3.48E-09 RUVBL1 3.80E-08
WWC3 1.07E-10 PTHLH 3.55E-09 SYN2 3.81E-08
GPC2 1.08E-10 ARID3B 3.59E-09 FES 3.81E-08
MSN 1.08E-10 HAND2 3.62E-09 EHMT2 3.82E-08
SNAP91 1.08E-10 ARL1 3.62E-09 PDCD11 3.85E-08
RELB 1.11E-10 SLC12A4 3.64E-09 BIRC2 3.90E-08
MAP2K1 1.11E-10 MTMR7 3.64E-09 TCIRG1 3.92E-08
STAT2 1.11E-10 SMPD3 3.65E-09 FURIN 3.94E-08
SRSF7 1.11E-10 PHF14 3.67E-09 ZNF311 3.95E-08
DDX60 1.11E-10 ERRFI1 3.69E-09 BET1L 3.97E-08
UPP1 1.12E-10 PWWP2B 3.72E-09 KBTBD6 3.98E-08
NFIX 1.15E-10 AGPAT9 3.73E-09 LTB 4.01E-08
PHOX2A 1.16E-10 WDR74 3.73E-09 NR1H2 4.02E-08
PON2 1.17E-10 ELOVL1 3.74E-09 NRXN1 4.03E-08
PHF11 1.17E-10 AHNAK 3.78E-09 CHI3L1 4.07E-08
ZBED4 1.18E-10 TCEAL3 3.78E-09 TMEM30A 4.07E-08
CYBRD1 1.18E-10 PRAME 3.78E-09 ATP5A1 4.10E-08
JPH4 1.19E-10 RNH1 3.79E-09 SETD6 4.11E-08
GLB1 1.19E-10 S100A13 3.80E-09 SERTAD1 4.11E-08
ELF4 1.19E-10 GFPT2 3.81E-09 PRRT4 4.15E-08
RPL5 1.21E-10 CRKL 3.82E-09 H1FX 4.19E-08
WBP5 1.21E-10 ZBTB37 3.83E-09 PARVA 4.29E-08
USP7 1.22E-10 INTS2 3.87E-09 JARID2 4.31E-08
NCL 1.23E-10 MGAT1 3.97E-09 ARFGAP3 4.36E-08
PARP14 1.24E-10 UNC13A 3.99E-09 EPRS 4.51E-08
LIMA1 1.25E-10 ATP8B1 4.01E-09 MXI1 4.52E-08
ZNF124 1.29E-10 DUSP26 4.01E-09 NECAP2 4.52E-08
SART3 1.32E-10 DRAP1 4.07E-09 IL6 4.55E-08
GBP3 1.33E-10 SH3BGRL3 4.07E-09 TRIM21 4.55E-08
MEIS1 1.34E-10 FBXO11 4.08E-09 COL12A1 4.55E-08
KCNC1 1.34E-10 CPXM1 4.10E-09 TMF1 4.56E-08
GNA12 1.35E-10 BTN3A3 4.15E-09 RSBN1L 4.59E-08
HEATR5B 1.36E-10 PVRL2 4.15E-09 STMN2 4.61E-08
TGFBR2 1.37E-10 COPB2 4.16E-09 GPLD1 4.61E-08
SERINC3 1.39E-10 FASN 4.16E-09 PYGL 4.66E-08
NOLC1 1.40E-10 ASCL1 4.17E-09 RSU1 4.67E-08
EIF4B 1.42E-10 ZNF146 4.18E-09 TGFB2 4.68E-08
RPS28 1.42E-10 KDELR3 4.19E-09 LRRC4B 4.69E-08
ZNF121 1.44E-10 RPS23 4.19E-09 FLAD1 4.70E-08
POLG2 1.46E-10 FAS 4.20E-09 INTS9 4.71E-08
FRS3 1.47E-10 SAMM50 4.24E-09 DGUOK 4.71E-08
GDAP1 1.48E-10 ZNF669 4.27E-09 RAB9A 4.72E-08
CCDC80 1.49E-10 ATP2A2 4.27E-09 MAP7D1 4.73E-08
ARPC5 1.49E-10 RIMBP2 4.31E-09 YIPF2 4.81E-08
TMEM2 1.50E-10 THOC5 4.31E-09 GLTSCR2 4.82E-08
MET 1.51E-10 KLHL32 4.36E-09 ISG15 4.83E-08
CELF4 1.54E-10 NINL 4.36E-09 ANKRD17 4.84E-08
HIST3H2A 1.55E-10 TBC1D14 4.38E-09 CHPF2 4.85E-08
PLAU 1.55E-10 DDX1 4.41E-09 ITCH 4.85E-08
MYL12A 1.57E-10 CYB561D2 4.43E-09 VARS 4.87E-08
S100A2 1.62E-10 LOXL1 4.43E-09 CBLN1 4.88E-08
NQO1 1.63E-10 C10orf2 4.44E-09 ITGA11 4.95E-08
TMBIM1 1.64E-10 MYL6 4.50E-09 DHPS 4.96E-08
DHX57 1.64E-10 ADCY1 4.57E-09 PLA2G16 4.97E-08
TBC1D2 1.67E-10 CUL4B 4.60E-09 CDC14A 4.98E-08
PHIP 1.67E-10 PIGT 4.62E-09 FLOT1 4.99E-08
OSMR 1.68E-10 ABHD12 4.67E-09 NOTCH2 5.00E-08
STAT3 1.69E-10 SMARCC1 4.69E-09 RPS6KL1 5.01E-08
FAM3A 1.69E-10 PLSCR4 4.71E-09 CNOT6 5.02E-08
ABI3BP 1.72E-10 SLC35F5 4.71E-09
CPSF3 1.73E-10 RAB31 4.72E-09
PRR14L 1.76E-10 ASPH 4.74E-09
SYNC 1.77E-10 COLEC11 4.74E-09
TMEM177 1.79E-10 METAP2 4.75E-09
DDX60L 1.80E-10 MRPS21 4.77E-09
CD59 1.84E-10 RSL24D1 4.79E-09
TGFBI 1.84E-10 EVL 4.86E-09
WDYHV1 1.84E-10 CDC42EP1 4.89E-09
TBC1D9B 1.85E-10 FEV 4.94E-09
SMARCB1 1.86E-10 ZNFX1 5.02E-09
RHBDL2 1.89E-10 MACF1 5.04E-09
ATIC 1.90E-10 FUS 5.06E-09
KBTBD11 1.91E-10 EML4 5.10E-09
HMOX1 1.96E-10 WDR75 5.11E-09
이들 [표 7] 및 [도 27]로부터 [표 7] 및 [도 27]에 공통적으로 낮은 P-value값을 갖는 유전자(gene)에 포함된 FRH(s)가 뇌종양 약물 반응성을 판단하기 위한 바이오마커로 실효성이 높은 것으로 판단할 수 있다.
head&neck(두경부암) 약물에 대한 반응성 바이오 마커
Cancer_Class Gene_exp 바이오 마커 (발현조절 FRH 변이세트)
##head_neck Gene_EXP:ALDH3A2 1_33118073_A_C,16_14764032_A_G
##head_neck Gene_EXP:AP1M2 1_168044966_T_A,8_17562030_G_A,6_31112217_C_T,6_31138682_C_A,1_2491175_G_A
##head_neck Gene_EXP:ATG7 7_140753336_A_T,16_84170124_G_C
##head_neck Gene_EXP:ATP10B 3_123931600_TAA_TA,14_19303535_T_C,17_39709512_T_C
##head_neck Gene_EXP:C16orf45 1_151848276_A_C,6_46140015_C_G,6_46161608_G_A,6_46167752_T_C,6_46168247_G_T
##head_neck Gene_EXP:C1orf116 3_129272155_T_C
##head_neck Gene_EXP:C1QTNF1 4_106337071_G_A
##head_neck Gene_EXP:CACNG4 6_5771301_A_C,7_140753336_A_T,16_11174168_A_G
##head_neck Gene_EXP:CAMSAP3 12_14460981_T_A,19_9985806_C_T,19_9986005_G_A
##head_neck Gene_EXP:CATSPER1 7_140753336_A_T
##head_neck Gene_EXP:CRB3 20_32983679_C_T
##head_neck Gene_EXP:CXADR 3_47333236_T_C,14_21082261_T_G,17_63831142_T_G,18_8387094_T_G
##head_neck Gene_EXP:CYB561 17_75618277_G_A,17_75620366_A_T
##head_neck Gene_EXP:DENND5A 16_14764032_A_G
##head_neck Gene_EXP:DOCK4 7_140753336_A_T,9_76227464_A_G
##head_neck Gene_EXP:DYNC1LI1 12_56346229_GAGA_G
##head_neck Gene_EXP:ECE1 7_100105324_G_A,7_101031028_C_T,17_49510638_C_T,20_32983679_C_T,12_50400904_T_G
##head_neck Gene_EXP:ELK3 14_21082261_T_G
##head_neck Gene_EXP:EMP3 16_14764032_A_G,17_75620366_A_T
##head_neck Gene_EXP:ESRP1 20_32983679_C_T
##head_neck Gene_EXP:FRMD4B 20_32983679_C_T
##head_neck Gene_EXP:FXYD3 1_110407655_G_A,16_1210969_G_A,9_88647579_G_T,22_50625559_G_C,10_103724260_T_C
##head_neck Gene_EXP:GDAP1 4_79907586_T_A
##head_neck Gene_EXP:GJB2 1_44978366_G_A
##head_neck Gene_EXP:GJB3 6_129475475_C_T,17_7461905_T_G,20_32983679_C_T
##head_neck Gene_EXP:GJB5 6_129475475_C_T,16_16349121_A_G,20_32983679_C_T
##head_neck Gene_EXP:GJB6 1_44978366_G_A
##head_neck Gene_EXP:GNB3 X_135719129_C_T
##head_neck Gene_EXP:GRHL2 20_32983679_C_T
##head_neck Gene_EXP:GYLTL1B 7_5938011_C_CCA,7_5945090_C_T
##head_neck Gene_EXP:HOXA1 11_3410400_C_T
##head_neck Gene_EXP:HR 2_87128802_G_A
##head_neck Gene_EXP:IGSF9 11_27340812_T_G,14_21082261_T_G,19_12690012_T_G
##head_neck Gene_EXP:INPP4B 7_6165368_A_C,19_54631001_T_C
##head_neck Gene_EXP:IRX2 1_2562891_G_A,7_140753336_A_T,12_14460981_T_A
##head_neck Gene_EXP:ITGB4 9_88647579_G_T,20_32983679_C_T
##head_neck Gene_EXP:JAG2 1_1971961_T_G,7_48043449_T_G
##head_neck Gene_EXP:KIFC3 1_207545558_G_A,1_207564114_G_A
##head_neck Gene_EXP:KLC3 20_32983679_C_T
##head_neck Gene_EXP:KRT6A 22_50576781_G_C
##head_neck Gene_EXP:LAD1 11_118555347_C_A
##head_neck Gene_EXP:LEPRE1 20_32983679_C_T
##head_neck Gene_EXP:MICAL2 12_88053784_G_C,12_88054289_A_AT,12_88077197_T_G
##head_neck Gene_EXP:NEBL 7_72926354_C_T
##head_neck Gene_EXP:NOTCH2 20_63940084_T_G
##head_neck Gene_EXP:OVOL1 15_22608045_C_A
##head_neck Gene_EXP:PANK3 8_8786072_C_G,8_8797513_C_T
##head_neck Gene_EXP:PBX3 5_19503134_C_A,9_17273880_A_G,9_33062185_G_GA
##head_neck Gene_EXP:PDE4DIP 10_101003795_A_C
##head_neck Gene_EXP:PEX13 10_98209718_A_C,10_98236016_C_T,10_98253681_C_T
##head_neck Gene_EXP:PHC2 20_32983679_C_T
##head_neck Gene_EXP:PLAU 9_114307582_T_G,16_2519752_T_C
##head_neck Gene_EXP:PNPLA6 11_122808020_A_G,14_92651884_C_T,16_14764032_A_G
##head_neck Gene_EXP:PPP1R14C 7_64336444_AT_A
##head_neck Gene_EXP:PTAFR 9_132827103_T_C
##head_neck Gene_EXP:PTX3 7_140753336_A_T,14_21082261_T_G
##head_neck Gene_EXP:RASA3 1_159858338_A_G,9_89037499_A_T,9_138176986_A_G,13_49892902_CT_C,13_49892908_G_C
##head_neck Gene_EXP:RASEF 2_11596179_G_A,2_131600094_A_G
##head_neck Gene_EXP:RHOV 1_1971961_T_G
##head_neck Gene_EXP:SEMA6A 9_129858179_C_A,9_129868385_TGAC_T,9_129873665_C_G
##head_neck Gene_EXP:SERPINB5 22_50625559_G_C
##head_neck Gene_EXP:SGCB 8_105802428_G_C,12_50109486_C_T
##head_neck Gene_EXP:SGTB 10_98209718_A_C,10_98236016_C_T,10_98253681_C_T
##head_neck Gene_EXP:SH2B3 14_21082261_T_G
##head_neck Gene_EXP:SH2D3A 6_129475475_C_T
##head_neck Gene_EXP:SLC39A13 7_140753336_A_T,14_21082261_T_G,3_48790461_T_G,17_35259011_T_G,20_36752827_T_G
##head_neck Gene_EXP:SLC9A3R1 15_75783322_C_G
##head_neck Gene_EXP:SLFN11 12_31697349_T_C
##head_neck Gene_EXP:TLN1 6_24595848_C_G
##head_neck Gene_EXP:TP63 20_32983679_C_T
##head_neck Gene_EXP:TPCN1 1_240245489_G_A
##head_neck Gene_EXP:TRIM29 11_45181661_C_T,20_32983679_C_T
##head_neck Gene_EXP:VANGL2 6_13182486_T_G
##head_neck Gene_EXP:VIM 16_14764032_A_G
##head_neck Gene_EXP:WNT10A 6_129475475_C_T
##head_neck Gene_EXP:ZHX3 7_72926354_C_T
##head_neck Gene_EXP:ZNF546 14_23360749_G_A,14_65267030_C_T,14_92651884_C_T
[표 8]에 제시된 FRH 들이 해당 유전자(gene) 발현과의 상관도(P-value)를 산출한 결과가 아래 [표 9]에 정리되어있다.
또한, [표 8]에 제시된 FRH들이 포함되어 발현된 유전자와 각각의 head_neck(두경부암) 약물과의 상관도(P-value)를 산출한 결과가 아래 [도 28]에 정리되어있다.
Correlation between gene expression and FRH
Gene pvalue(FRH-Gene_exp) Gene pvalue(FRH-Gene_exp) Gene pvalue(FRH-Gene_exp)
FGF5 1.03E-08 KIAA0895 6.06E-06 CREG2 2.30E-05
SLC39A13 1.17E-08 BMP7 6.40E-06 DAP 2.47E-05
SH2B3 2.76E-08 LOXL2 6.56E-06 G0S2 2.48E-05
PTX3 6.76E-08 UROD 6.60E-06 PAK6 2.53E-05
RAI14 1.50E-07 CXorf57 6.66E-06 AP1S2 2.53E-05
RCN3 1.90E-07 SYT17 7.19E-06 ANKRD65 2.55E-05
SH3KBP1 1.97E-07 ZNF259 7.21E-06 ANK3 2.71E-05
RUSC2 1.99E-07 RNPEP 7.27E-06 FUT1 2.77E-05
LPXN 2.39E-07 MTUS1 7.28E-06 APOA1BP 2.77E-05
CXADR 3.19E-07 CHRNA1 7.45E-06 SMURF2 2.86E-05
MICAL2 4.02E-07 HSPA2 7.78E-06 TIMP1 2.87E-05
ANTXR2 4.24E-07 CTSL2 8.05E-06 SERPINB6 2.91E-05
LRRC1 4.81E-07 RFTN1 8.09E-06 GGCT 2.92E-05
IGSF9 5.81E-07 DRAP1 8.41E-06 TSSC4 2.93E-05
CALU 6.01E-07 CD151 8.72E-06 PLK3 3.04E-05
BET1L 7.18E-07 SLC27A3 8.89E-06 DLX4 3.10E-05
ETS1 8.17E-07 C11orf68 9.21E-06 CD44 3.13E-05
FGFR3 8.74E-07 CWH43 9.57E-06 RAB34 3.21E-05
PLEKHG6 9.17E-07 GSTP1 9.98E-06 FOSL1 3.23E-05
SLC9A3R1 9.64E-07 CPT2 1.00E-05 ZBTB47 3.23E-05
NOTCH3 9.67E-07 TGFB1I1 1.01E-05 COL6A2 3.32E-05
HYAL1 9.86E-07 RHOG 1.02E-05 PARVA 3.35E-05
TLN1 9.90E-07 KLK6 1.04E-05 KLK8 3.37E-05
TMEM200A 1.00E-06 PURB 1.06E-05 PDCD1LG2 3.40E-05
GRTP1 1.01E-06 ZNF214 1.07E-05 SEPX1 3.43E-05
TARBP1 1.04E-06 SPRTN 1.07E-05 EMP2 3.44E-05
ELK3 1.10E-06 PLEKHA1 1.08E-05 ARCN1 3.44E-05
ZNF69 1.12E-06 PPIP5K1 1.08E-05 S100A14 3.45E-05
PKIG 1.18E-06 RAB25 1.08E-05 DSC2 3.57E-05
HEMK1 1.19E-06 CASP7 1.10E-05 AFAP1 3.59E-05
FAM167A 1.26E-06 INADL 1.12E-05 SRPR 3.66E-05
C1orf210 1.28E-06 ACTR8 1.13E-05 VEPH1 3.80E-05
SYK 1.35E-06 DLX6 1.17E-05 ITGB4 3.80E-05
SYBU 1.47E-06 AFTPH 1.18E-05 ELF1 3.83E-05
KLHL13 1.51E-06 ZEB1 1.20E-05 GBE1 3.85E-05
FHL1 1.52E-06 ST6GALNAC2 1.21E-05 LINGO2 3.88E-05
VIM 1.61E-06 ADSSL1 1.21E-05 SP3 3.91E-05
LLGL2 1.67E-06 FLI1 1.25E-05 SEMA7A 3.91E-05
ABCA7 2.55E-06 PTPN4 1.25E-05 PRDM8 3.94E-05
NEURL1B 2.58E-06 AZI2 1.26E-05 ABL1 3.95E-05
VAV3 2.66E-06 ALG6 1.29E-05 KRTCAP3 4.03E-05
EIF4EBP2 2.82E-06 SLC9A7 1.33E-05 PTPRG 4.10E-05
MAGED1 2.91E-06 SLC25A37 1.38E-05 XPR1 4.16E-05
AP1M1 3.00E-06 SEPP1 1.40E-05 HHIP 4.18E-05
FGFR2 3.02E-06 ACOX1 1.44E-05 CNIH3 4.19E-05
TSPAN4 3.05E-06 RGMB 1.50E-05 FAM114A1 4.19E-05
BLNK 3.07E-06 AUTS2 1.52E-05 ARF4 4.23E-05
ZNRF2 3.27E-06 HMGA1 1.55E-05 SPINT1 4.31E-05
CNRIP1 3.31E-06 APBB1IP 1.62E-05 TRIM29 4.32E-05
KIF26A 3.40E-06 HOXC13 1.64E-05 LOX 4.35E-05
HADH 3.42E-06 RIC8A 1.67E-05 BTG2 4.36E-05
ZNF652 3.45E-06 ANXA6 1.68E-05 GNG11 4.43E-05
JAG2 3.51E-06 C6orf1 1.74E-05 RSBN1L 4.61E-05
CREB3L2 3.58E-06 LCORL 1.95E-05 TPM4 4.70E-05
ASCL2 3.85E-06 ZEB2 1.96E-05 DLC1 4.73E-05
DNAJB5 3.87E-06 RABGAP1 2.02E-05 CD9 4.89E-05
ASB1 3.88E-06 NDRG2 2.09E-05 ROGDI 4.95E-05
PYGB 4.28E-06 EFNA1 2.09E-05 PLAUR 4.96E-05
AXL 4.31E-06 C1orf35 2.09E-05 STOX2 4.97E-05
TRHDE 4.60E-06 RAP1GAP 2.10E-05 PTPN6 5.15E-05
KIAA1598 4.60E-06 LIX1L 2.10E-05 DCBLD2 5.21E-05
HR 4.72E-06 KRT74 2.10E-05 PHLDA1 5.30E-05
NAV3 4.86E-06 GPX2 2.11E-05 PIK3C2B 5.47E-05
SYNE2 5.13E-06 SUDS3 2.13E-05 EIF4A3 5.61E-05
AOX1 5.30E-06 MARK1 2.21E-05 RAPGEFL1 5.61E-05
METTL7A 5.42E-06 RIT1 2.22E-05 WDR46 5.62E-05
CLIC4 5.56E-06 PTCH1 2.23E-05
이들 [표 9] 및 [도 28]로부터 [표 9] 및 [도 28]에 공통적으로 낮은 P-value값을 갖는 유전자(gene)에 포함된 FRH(s)가 두경부암 약물 반응성을 판단하기 위한 바이오마커로 실효성이 높은 것으로 판단할 수 있다.
lung(폐암) 약물에 대한 반응성 바이오 마커
Cancer_Class Gene_exp 바이오 마커 (발현조절 FRH 변이세트)
##lung Gene_EXP:RAD1 3_125538667_A_G,22_26499019_C_T
##lung Gene_EXP:P2RY2 2_112913828_T_C
##lung Gene_EXP:AMN 12_52057489_T_C
##lung Gene_EXP:SPAG1 3_151328520_G_A,17_50192542_A_G
##lung Gene_EXP:TUBE1 14_68909906_G_A,14_68910058_T_C,14_68910093_G_A
##lung Gene_EXP:SERPINF1 5_5209097_G_A
##lung Gene_EXP:VAT1L 1_201899905_G_C
##lung Gene_EXP:PPP1R14A 5_76209739_T_G,11_6623955_G_C,1_35479062_T_G,X_149774713_G_C,15_57438247_A_C
##lung Gene_EXP:SEPT9 20_1915109_T_G
##lung Gene_EXP:ATOH7 2_117944188_C_T
##lung Gene_EXP:PEA15 19_2097371_G_C
##lung Gene_EXP:MCM7 14_22884857_G_C
##lung Gene_EXP:EMC3 1_197039467_A_C
##lung Gene_EXP:TSG101 4_99524606_GCTAT_G
##lung Gene_EXP:OR13H1 2_201723527_C_T,2_201728736_A_G
##lung Gene_EXP:HCFC1R1 11_72017862_AGTCAAC_A,11_72023165_T_C,13_33836394_C_T,20_1477514_A_G
##lung Gene_EXP:HCFC1R1 11_72017862_AGTCAAC_A,11_72023165_T_C,13_33836394_C_T,20_1477514_A_G
##lung Gene_EXP:NCAPG2 1_149021276_A_C
##lung Gene_EXP:HCFC1R1 11_72017862_AGTCAAC_A,11_72023165_T_C,13_33836394_C_T,20_1477514_A_G
##lung Gene_EXP:CDH2 1_155060858_G_A
##lung Gene_EXP:TOR1AIP1 19_12163145_T_G
##lung Gene_EXP:ABCA5 17_50677651_A_G,17_78529677_G_C
##lung Gene_EXP:TP53I11 7_45648634_G_A
##lung Gene_EXP:ACN9 2_3465735_T_C
##lung Gene_EXP:TPD52L2 9_134036501_T_G
##lung Gene_EXP:ACSF2 2_71393433_A_G,2_71424561_G_GT,2_71428456_T_A,2_71433365_T_TC
##lung Gene_EXP:TPGS2 3_112202378_G_T
##lung Gene_EXP:TPP1 3_197848065_G_C
##lung Gene_EXP:ADA 4_39457622_A_G
##lung Gene_EXP:TRIM21 18_50806833_C_G
##lung Gene_EXP:ADAMTS14 19_52554226_G_A
##lung Gene_EXP:TRIM33 4_78315728_T_G,5_176575310_A_C,6_136362716_T_G,12_14806481_T_G,22_42516026_A_G
##lung Gene_EXP:ADCYAP1 12_96909915_A_C
##lung Gene_EXP:ADNP2 9_41294004_C_A
##lung Gene_EXP:TRIP10 14_20381224_T_G
##lung Gene_EXP:ADTRP 4_20727343_G_C
##lung Gene_EXP:TRIP11 1_230792766_C_G
##lung Gene_EXP:AGA 11_124016277_A_G
##lung Gene_EXP:TRIP6 17_78529677_G_C
##lung Gene_EXP:AGBL4 2_217842134_T_C,2_217847379_A_G,2_217847583_C_T,2_217847883_G_A,2_217848003_A_G
##lung Gene_EXP:TSC22D4 17_78558361_G_A
##lung Gene_EXP:TSPAN8 14_59479381_T_C,14_59510888_CA_C,14_59473009_T_C,14_59498987_A_C,14_59476235_T_TCAAC
##lung Gene_EXP:AGXT2L2 1_451649_A_AG,15_101875991_T_TC,2_217847583_C_T,2_217848003_A_G,2_217847883_G_A
##lung Gene_EXP:TSR2 8_109271027_T_C,8_109271124_T_G
##lung Gene_EXP:AGXT2L2 1_451649_A_AG,2_217847583_C_T,2_217848003_A_G,2_217847883_G_A,15_101875991_T_TC
##lung Gene_EXP:TTC1 5_155013898_A_G
##lung Gene_EXP:AHI1 2_102664958_A_C
##lung Gene_EXP:TTC3 12_66128870_G_A
##lung Gene_EXP:AIM1 11_124396830_G_A
##lung Gene_EXP:TTC9B 17_74541739_G_A
##lung Gene_EXP:ALDH3A1 21_41825867_C_T
##lung Gene_EXP:TUBB 1_101786406_G_A
##lung Gene_EXP:ALG14 12_27755086_G_GA
##lung Gene_EXP:TUBGCP3 2_68528704_T_C,10_31363289_T_C,16_60358945_T_C
##lung Gene_EXP:ALG9 14_76498312_C_T
##lung Gene_EXP:TXNL4A 11_124397016_A_G
##lung Gene_EXP:AMIGO2 19_2109072_C_T,19_2109158_T_C,19_2121317_C_T,19_2123329_A_G
##lung Gene_EXP:UBA7 21_42543649_A_G
##lung Gene_EXP:UBAP1 5_31510999_G_T
##lung Gene_EXP:ANKMY1 12_103753400_C_A
##lung Gene_EXP:UBE2H 2_9279286_C_T
##lung Gene_EXP:ANKRD22 17_81206909_A_C
##lung Gene_EXP:UROS 12_113100610_A_T,12_113102024_C_T,12_113115869_AG_A,12_113117141_G_A,12_113121642_A_G
##lung Gene_EXP:ANKRD46 5_124701240_T_G
##lung Gene_EXP:ANO1 4_36121402_A_G
##lung Gene_EXP:USP30 5_70495058_G_T,6_57924451_G_T,X_71592597_A_T
##lung Gene_EXP:ANO10 10_94340500_TA_T
##lung Gene_EXP:VCL 10_97936313_A_C
##lung Gene_EXP:ANO4 9_41294004_C_A
##lung Gene_EXP:VEZF1 4_122258745_C_T
##lung Gene_EXP:AP3M2 17_8888776_G_A
##lung Gene_EXP:VTI1B 2_225401003_CTGG_C
##lung Gene_EXP:APBB1 7_117548606_ATG_A
##lung Gene_EXP:WASF3 15_67165360_A_G
##lung Gene_EXP:ARID1B 1_169953900_G_GT
##lung Gene_EXP:WDR18 19_985997_C_G
##lung Gene_EXP:ARID5B 2_237753511_A_G,2_237821674_A_G
##lung Gene_EXP:WDR26 20_63967788_C_T
##lung Gene_EXP:ARL6IP6 2_178707495_G_T,4_51995319_G_T,17_42806693_T_C,17_43189040_A_C
##lung Gene_EXP:WDR55 11_2335471_C_T
##lung Gene_EXP:WHAMM 15_59207967_A_G,15_59207979_A_G,15_59207981_C_G,15_59207987_T_C
##lung Gene_EXP:ARSD 1_101786406_G_A
##lung Gene_EXP:ARVCF 10_133626829_C_T,15_71256598_T_C
##lung Gene_EXP:ZBED5 5_138430313_A_C,5_176529597_A_C,7_99486962_A_C,11_62807431_T_G,14_69704655_C_T
##lung Gene_EXP:ASTN1 7_152816454_C_T
##lung Gene_EXP:ZCCHC11 22_36566306_C_G
##lung Gene_EXP:ATG4D 19_12392240_G_A,19_12392282_A_G,19_12393278_A_G,19_12431541_A_G,19_12433052_A_G
##lung Gene_EXP:ZDHHC13 2_130342165_A_C,5_141193109_A_G,14_69704655_C_T
##lung Gene_EXP:ATHL1 3_125578903_AT_A
##lung Gene_EXP:ZDHHC5 7_101136942_T_G,16_89729370_A_C
##lung Gene_EXP:ATP6V0B 17_78529723_C_G
##lung Gene_EXP:ZEB1 3_58285236_T_C,9_41905830_C_G
##lung Gene_EXP:ATRIP 19_815835_G_A
##lung Gene_EXP:ZFHX2 9_27567147_C_T
##lung Gene_EXP:AVPI1 3_157413999_A_C
##lung Gene_EXP:ZFP82 3_33120406_C_T
##lung Gene_EXP:AXL 14_73713060_A_C
##lung Gene_EXP:ZNF250 5_135888024_G_T
##lung Gene_EXP:BAALC 15_67236036_T_G
##lung Gene_EXP:ZNF292 20_1445690_A_C,2_130342165_A_C,1_89935566_A_C,5_141193109_A_G,10_62069760_A_C
##lung Gene_EXP:BIRC7 17_78507511_T_C,17_78510525_G_A
##lung Gene_EXP:BTG2 6_34872273_T_G
##lung Gene_EXP:ZNF292 20_1445690_A_C,5_141193109_A_G,2_130342165_A_C,10_62069760_A_C,1_89935566_A_C
##lung Gene_EXP:C10orf76 2_169557387_G_GA
##lung Gene_EXP:C11orf48 6_34872273_T_G,14_73287170_T_G,7_36299099_C_T,12_119770711_C_T,7_55155865_C_G
##lung Gene_EXP:ZNF295 11_113854221_T_C
##lung Gene_EXP:ZNF296 2_222624260_G_A
##lung Gene_EXP:C12orf57 1_103082763_C_G
##lung Gene_EXP:ZNF345 1_153772281_T_G,6_53654807_C_T
##lung Gene_EXP:C14orf142 11_66055499_T_G
##lung Gene_EXP:ZNF420 6_53654807_C_T
##lung Gene_EXP:C16orf59 2_217847583_C_T,2_217847883_G_A
##lung Gene_EXP:ZNF594 19_12433052_A_G
##lung Gene_EXP:C17orf75 6_32183680_C_G
##lung Gene_EXP:ZNF750 19_15794719_C_A,19_15807367_G_T
##lung Gene_EXP:C1orf198 3_98581510_A_C,5_1079483_A_C,12_121263747_T_G,20_6215106_T_C
##lung Gene_EXP:ZNF93 17_47361586_C_T,17_47402080_A_C
##lung Gene_EXP:ZSCAN16 7_26185482_G_A
##lung Gene_EXP:C5orf34 7_22511655_A_C
##lung Gene_EXP:C5orf54 19_10499560_A_G
##lung Gene_EXP:C9orf123 9_41898374_T_G
##lung Gene_EXP:C9orf69 2_9954891_G_GT,2_9996464_T_C
##lung Gene_EXP:CABP7 1_46344858_A_G
##lung Gene_EXP:CACNA2D2 15_67236036_T_G
##lung Gene_EXP:CASP8 17_75904383_G_C
##lung Gene_EXP:CASP8AP2 6_109431362_C_A,10_24584658_G_C
##lung Gene_EXP:CAV1 10_133626829_C_T
##lung Gene_EXP:CBLN2 1_170016655_A_G
##lung Gene_EXP:CCDC102A 17_34982963_C_CT
##lung Gene_EXP:CCDC113 16_67199408_A_C
##lung Gene_EXP:CCDC142 9_85773919_A_G
##lung Gene_EXP:CD55 5_113384951_C_A
##lung Gene_EXP:CD63 6_87656990_C_T
##lung Gene_EXP:CD97 4_8036186_A_G,5_141193109_A_G,7_108514148_A_C,12_108517007_T_G,17_80137479_A_T
##lung Gene_EXP:CDC23 22_37143673_T_C
##lung Gene_EXP:CDC25A 19_10793898_A_C
##lung Gene_EXP:CDCA5 2_217847583_C_T
##lung Gene_EXP:CDCP1 22_24253656_C_G
##lung Gene_EXP:CEBPD 6_150926303_A_G
##lung Gene_EXP:CECR2 15_30596563_A_G
##lung Gene_EXP:CENPM 19_10793898_A_C
##lung Gene_EXP:CES2 8_17085328_C_T
##lung Gene_EXP:CHGB 15_67236036_T_G
##lung Gene_EXP:CHN1 17_81206909_A_C
##lung Gene_EXP:CHST8 11_5901136_G_A
##lung Gene_EXP:CLCNKA 10_31363289_T_C
##lung Gene_EXP:CLIP3 5_163482681_G_A
##lung Gene_EXP:CLPP 7_95587100_T_G
##lung Gene_EXP:CLSPN 15_62651935_A_G,15_62657955_G_C
##lung Gene_EXP:CNKSR3 17_78539866_T_C
##lung Gene_EXP:CNPY4 17_48728228_G_A
##lung Gene_EXP:CPNE8 X_24055660_C_A
##lung Gene_EXP:CRNKL1 19_49365896_G_C
##lung Gene_EXP:CSF2 X_73845822_T_G
##lung Gene_EXP:CSNK1A1 20_47658268_C_G
##lung Gene_EXP:CSNK2A1 7_4077030_A_G,8_119240272_G_C,20_36185166_C_G
##lung Gene_EXP:CSRNP1 2_95859892_G_T,8_7952044_T_C
##lung Gene_EXP:CTRB2 4_37433902_C_T,17_32933237_C_T,17_32934364_G_A
##lung Gene_EXP:CTSL1 10_120866541_C_T,10_62069760_A_C,X_52907336_A_C,20_57610424_A_C,17_75130604_T_G
##lung Gene_EXP:CTSL1 17_75130604_T_G,10_62069760_A_C,10_120866541_C_T,7_6857531_A_G,20_57610424_A_C
##lung Gene_EXP:CTSL1 17_75130604_T_G,10_62069760_A_C,10_120866541_C_T,7_6857531_A_G,X_52907336_A_C
##lung Gene_EXP:CTSL1 17_75130604_T_G,10_62069760_A_C,7_6857531_A_G,10_120866541_C_T,20_57610424_A_C
##lung Gene_EXP:CXCL2 X_89922110_G_C
##lung Gene_EXP:CXXC1 2_119254595_G_A,3_112199369_A_G
##lung Gene_EXP:DALRD3 1_13418327_A_C,1_244857989_TA_T,2_232856863_A_C,15_30553868_T_C
##lung Gene_EXP:DAPL1 14_69704655_C_T,2_232484578_G_C,21_46245169_G_A,17_7701545_A_C,2_121732218_A_C
##lung Gene_EXP:DCAKD 6_32183680_C_G
##lung Gene_EXP:DCTD 8_7429219_C_T
##lung Gene_EXP:DCUN1D2 10_31363289_T_C
##lung Gene_EXP:DDR1 2_174801578_A_G,4_89936328_G_A
##lung Gene_EXP:DLX5 2_217847583_C_T,2_217847883_G_A,2_217848003_A_G
##lung Gene_EXP:DNMT3A 22_36566306_C_G
##lung Gene_EXP:DOK6 18_12840880_T_C
##lung Gene_EXP:DPY19L3 15_65564315_G_A,17_78425362_G_A,17_78427070_C_T
##lung Gene_EXP:DPYSL4 2_217847583_C_T,2_217847883_G_A,2_217848003_A_G,2_217842134_T_C,2_217847379_A_G
##lung Gene_EXP:DPYSL4 2_217847583_C_T,2_217847883_G_A,2_217848003_A_G,2_217847379_A_G,2_217842134_T_C
##lung Gene_EXP:DQX1 1_113907966_C_T
##lung Gene_EXP:DSC3 11_18285498_T_C,11_18311889_A_T
##lung Gene_EXP:DTL 2_29239654_G_A
##lung Gene_EXP:DTX3L 4_185267219_TA_T
##lung Gene_EXP:DUSP3 11_71565805_A_G
##lung Gene_EXP:DUSP5 6_32183680_C_G
##lung Gene_EXP:DYRK1B 22_36566306_C_G
##lung Gene_EXP:DYRK2 2_157538567_C_G,9_13219571_T_C
##lung Gene_EXP:E2F4 17_3727947_A_G
##lung Gene_EXP:EBP 14_91475998_T_A
##lung Gene_EXP:ELL2 6_32183680_C_G
##lung Gene_EXP:ELOVL1 1_203683316_A_G,1_203698281_T_C
##lung Gene_EXP:EPSTI1 2_226796327_T_C
##lung Gene_EXP:ERAP2 5_96986715_C_T,5_96917400_T_C,5_97003398_AC_A,5_96908881_A_C,5_96895179_A_ATT
##lung Gene_EXP:ERAP2 5_96986715_C_T,5_96917400_T_C,5_97003398_AC_A,5_97027703_C_T,5_96908881_A_C
##lung Gene_EXP:ERAP2 5_96986715_C_T,5_96917400_T_C,5_97027703_C_T,5_96996381_TC_T,5_97003398_AC_A
##lung Gene_EXP:EREG 17_50677651_A_G
##lung Gene_EXP:ERH 6_47579334_T_TAA
##lung Gene_EXP:ERLEC1 10_52768593_C_G
##lung Gene_EXP:ERO1L 6_47579334_T_TAA
##lung Gene_EXP:ESF1 2_231163667_A_C,10_37197397_A_C,11_124877210_T_G,20_26081320_C_T
##lung Gene_EXP:EVL 7_33264495_A_G
##lung Gene_EXP:EVPL 15_84798628_G_A
##lung Gene_EXP:FAM114A1 2_217847583_C_T
##lung Gene_EXP:FAM174A 1_198735165_C_T
##lung Gene_EXP:FBLN7 12_96909915_A_C
##lung Gene_EXP:FBXO21 17_47835431_A_G,5_176575304_A_C,10_37162775_G_C,2_223598038_G_T,2_130173628_A_C
##lung Gene_EXP:FCRLB 10_102365533_A_G,12_49974763_C_G,2_118982373_A_G,1_183239405_G_A,9_41189241_T_C
##lung Gene_EXP:FCRLB 12_49974763_C_G,1_183239405_G_A,10_102365533_A_G,2_118982373_A_G,X_52907336_A_C
##lung Gene_EXP:FEZ2 X_108735142_T_G
##lung Gene_EXP:FGF9 13_32131648_A_G
##lung Gene_EXP:FGFBP1 2_65069680_A_C,17_81206909_A_C
##lung Gene_EXP:FHL3 1_50200843_C_T
##lung Gene_EXP:FLNA 3_118902653_C_T
##lung Gene_EXP:FN1 22_16697696_G_A
##lung Gene_EXP:FSTL1 1_146962991_T_C
##lung Gene_EXP:FYN X_120253978_C_CTGA
##lung Gene_EXP:GALNT3 3_7680310_G_A,6_150945502_T_G
##lung Gene_EXP:GALNT6 X_154465468_T_C
##lung Gene_EXP:GBP1 3_55480738_A_T
##lung Gene_EXP:GEMIN5 5_71233740_G_C
##lung Gene_EXP:GGCX 19_39875355_A_T
##lung Gene_EXP:GLIPR1 16_55398_G_T
##lung Gene_EXP:GLIS3 1_211372116_TC_T,6_121115274_C_T
##lung Gene_EXP:GLTP 2_182994745_T_C
##lung Gene_EXP:GNAO1 10_133626013_G_A
##lung Gene_EXP:GNS 11_1163029_C_G
##lung Gene_EXP:GPC1 3_184278425_C_T
##lung Gene_EXP:GPR87 19_15807367_G_T
##lung Gene_EXP:GPX1 19_38802052_C_G,6_43512063_C_G,11_117913802_T_G,12_49974763_C_G,2_85665590_T_G
##lung Gene_EXP:HADHB 19_48942517_C_T,19_48944320_G_A,19_48944456_G_A
##lung Gene_EXP:HDAC6 13_45503246_G_A
##lung Gene_EXP:HIBADH 1_485270_G_A
##lung Gene_EXP:HIRA 9_41341340_C_T
##lung Gene_EXP:HK1 16_74886293_G_A
##lung Gene_EXP:HMOX1 1_183239405_G_A,2_86785910_T_G,20_39018962_A_C
##lung Gene_EXP:HOXA1 6_112201651_G_A
##lung Gene_EXP:HPS1 9_136453326_A_G,9_136463607_G_A,9_136476782_G_A
##lung Gene_EXP:HSD17B10 5_24511259_C_T
##lung Gene_EXP:ICAM1 8_12358868_A_G
##lung Gene_EXP:ID4 4_9334816_T_C
##lung Gene_EXP:IDH1 7_16674308_A_AT
##lung Gene_EXP:IER5L 9_34623341_A_G
##lung Gene_EXP:IFI35 12_15589379_GA_G
##lung Gene_EXP:IFIT3 18_50806833_C_G
##lung Gene_EXP:IFIT5 6_169632990_G_A,6_169665646_G_A
##lung Gene_EXP:IGDCC3 20_32917383_C_T
##lung Gene_EXP:IKBKAP 10_52768593_C_G
##lung Gene_EXP:IL15RA 22_36566306_C_G
##lung Gene_EXP:IL17RB 19_44506064_G_T
##lung Gene_EXP:IL21 16_74410940_A_G
##lung Gene_EXP:IL31RA 4_20727343_G_C
##lung Gene_EXP:IMMP1L 17_47402080_A_C,17_47592062_T_TA,17_47656843_CTTT_C,17_47673230_G_A
##lung Gene_EXP:INADL 2_241246976_C_T,3_58285236_T_C,16_75166518_T_C
##lung Gene_EXP:ITGA3 2_217847583_C_T,2_217847883_G_A,2_217848003_A_G
##lung Gene_EXP:ITPR1 4_8036186_A_G
##lung Gene_EXP:ITPRIPL1 2_24209270_T_C
##lung Gene_EXP:KCNJ11 2_217847583_C_T,2_217847883_G_A,2_217848003_A_G,2_217848559_G_A
##lung Gene_EXP:KCNK6 17_81206909_A_C
##lung Gene_EXP:KCNK9 10_28880454_A_G
##lung Gene_EXP:KCNMB2 18_50806833_C_G
##lung Gene_EXP:KCTD18 9_60935641_T_G
##lung Gene_EXP:KCTD21 4_86764643_T_G,4_86782277_A_C,4_86785379_C_T,11_129888749_A_C,14_23968860_T_C
##lung Gene_EXP:KDM1B 15_65447029_G_A
##lung Gene_EXP:KHK 2_217847583_C_T,2_217848003_A_G
##lung Gene_EXP:KHSRP 4_119158232_G_A
##lung Gene_EXP:KIAA1239 7_83961536_T_C
##lung Gene_EXP:KIDINS220 5_50403159_C_A
##lung Gene_EXP:KLK6 4_48170201_C_T,4_48170249_G_A
##lung Gene_EXP:KLRG1 21_42543649_A_G,21_42565845_G_A
##lung Gene_EXP:KMT2C 1_64857635_C_A,6_166586261_A_C,15_40272241_A_C,17_4932735_A_C,17_47835431_A_G
[표 10]에 제시된 FRH 들이 해당 유전자(gene) 발현과의 상관도(P-value)를 산출한 결과가 아래 [표 11]에 정리되어있다.
또한, [표 10]에 제시된 FRH들이 포함되어 발현된 유전자와 각각의 lung(폐암) 약물과의 상관도(P-value)를 산출한 결과가 아래 [도 29]에 정리되어있다.
Correlation between gene expression and FRH
Gene pvalue(FRH-Gene_exp) Gene pvalue(FRH-Gene_exp) Gene pvalue(FRH-Gene_exp)
POLR3K 1.67E-06 LIG1 0.000297009 NDUFAB1 0.000622562
ISLR2 1.88E-06 ZDHHC13 0.000298381 EPHB1 0.000625456
TFDP3 3.05E-06 FOXI1 0.000305171 ZNFX1 0.000630994
RTN4 6.47E-06 HRAS 0.000307846 CTSO 0.000632192
AGBL4 1.02E-05 GRID2 0.00032141 IL6ST 0.000633631
SNRNP25 1.12E-05 CHAF1B 0.000323273 GHSR 0.000650493
AGXT2L2 2.80E-05 LY96 0.00032386 GRM8 0.000660785
KCNJ11 3.26E-05 DLX5 0.000324205 IFNG 0.000678124
WDR34 3.35E-05 LRRN3 0.000331053 BHLHE22 0.0006809
ZWINT 3.63E-05 PAX2 0.000333304 SNRPD1 0.000688253
TMEM240 3.86E-05 MXRA7 0.000337717 PDCD6IP 0.000688266
ZNF833P 5.04E-05 PPAP2A 0.000338058 NEK6 0.000695793
NOTCH4 5.11E-05 SGPP1 0.000340151 HRH1 0.000716457
LHFPL2 5.92E-05 NPC1 0.000344985 EIF4E1B 0.000720264
TMPO 6.23E-05 DNA2 0.000351331 TBPL2 0.000740785
DPYSL4 6.74E-05 ARVCF 0.00035556 AIF1L 0.000747275
CD4 8.15E-05 CDCA5 0.00036589 BRI3BP 0.000757983
PRDX2 8.25E-05 RFC5 0.000369769 RPS6KL1 0.000776133
C1orf194 8.40E-05 DLGAP3 0.000371161 SLC25A10 0.000776179
C2orf15 8.85E-05 NOL4 0.000378602 UBE2T 0.000781573
MSN 8.89E-05 RIC3 0.000378764 IFI44 0.000782934
SMARCE1 0.000103143 GRN 0.000381551 IFI6 0.000783873
CST11 0.000110776 SYK 0.000406629 RAD51D 0.000803271
CPLX2 0.000116401 GPX8 0.000423944 ICAM1 0.000814308
PLEKHM1 0.000121608 RASSF8 0.000425007 UNG 0.000821896
DMRTA2 0.000122743 KHK 0.000427192 HLA-E 0.000826478
MGAT5B 0.00012583 TLN2 0.00042859 KIAA0895 0.000849579
RGMA 0.000130891 CHAF1A 0.00044724 PCYT1B 0.000855837
HIST1H3C 0.000137766 PBK 0.000456897 TDG 0.000865187
DEPDC5 0.000151458 MBD3 0.000463435 SNAP23 0.000883492
HCN4 0.000162105 DBNDD1 0.00047096 CAMSAP3 0.000884723
ZBTB16 0.000163352 H6PD 0.000471502 SAC3D1 0.000886594
LSM4 0.000164338 CDHR4 0.000472181 E4F1 0.000886723
ATP4B 0.00016945 ZNF236 0.0004749 UPP1 0.000911641
DONSON 0.000171437 CDC6 0.000478257 HSPB11 0.00091532
TRMU 0.000176173 IGF2BP2 0.000490963 RFX3 0.000915936
CHST9 0.000176885 ERAP1 0.000497491 CREB3L1 0.000922729
RASAL1 0.000177467 HIST1H4B 0.000500157 PACSIN1 0.000924656
TBX5 0.000198886 HTR1E 0.000506038 MZT2B 0.000925961
SEMA4D 0.000200406 ZNF219 0.00051924 KIF22 0.000932174
SLC26A5 0.000205346 SOCS5 0.000521943 NSMAF 0.000932954
FUT1 0.000207729 AHNAK2 0.000527886 CALU 0.000952122
CAMKV 0.000210417 ATP5L 0.000530816 C16orf59 0.000959405
TMEM176B 0.000213389 HNRNPA1L2 0.00053364 SP110 0.000964561
SFXN3 0.000221559 USP32 0.000533881 ZNF80 0.000965145
CHRNB2 0.000232469 MYT1 0.000536245 PEA15 0.000965531
HIPK4 0.000233751 ESCO2 0.000538795 ZNF385B 0.000971107
KCNJ3 0.000238276 SLC25A4 0.000540249 KDELR3 0.000975043
NUDT16L1 0.000239911 OPCML 0.000541145 ADRA1A 0.000982021
DRD2 0.000245153 TGOLN2 0.000544763
LZTS1 0.000253954 HMGN3 0.000558519
NUP62CL 0.000254788 BRCA1 0.000567047
RABIF 0.000256869 KCNK17 0.000567484
TOR2A 0.000260969 CCDC34 0.00057728
RRM1 0.000264266 ITIH1 0.000578889
OVOL2 0.00026549 POLE 0.000587318
ITGA3 0.000269067 NBAS 0.000588262
CELF3 0.000270543 RAD51AP1 0.000600158
SNX10 0.000270832 AIF1 0.000600205
RNF208 0.000283861 FRAT2 0.000607255
DPY19L1 0.000289206 APCDD1 0.000610283
KCND3 0.000291824 HRH3 0.000621755
이들 [표 11] 및 [도 29]로부터 [표 11] 및 [도 29]에 공통적으로 낮은 P-value값을 갖는 유전자(gene)에 포함된 FRH(s)가 폐암 약물 반응성을 판단하기 위한 바이오마커로 실효성이 높은 것으로 판단할 수 있다.
육종암(bone) 약물에 대한 반응성 바이오 마커
Cancer_Class Gene_exp 바이오 마커 (발현조절 FRH 변이세트)
##bone Gene_EXP:SEPT5 1_26457907_T_G
##bone Gene_EXP:ABCA5 6_151015603_C_G
##bone Gene_EXP:ABHD6 1_26457907_T_G,12_52771095_C_G,22_18847351_G_C,22_21127217_C_G,5_141432375_A_C
##bone Gene_EXP:ABHD6 12_52771095_C_G,1_26457907_T_G,5_141432375_A_C,2_119366546_A_G,22_18847351_G_C
##bone Gene_EXP:ACACB 1_26457907_T_G,22_18847351_G_C
##bone Gene_EXP:ACTN2 1_26457907_T_G,22_18847351_G_C,22_21127217_C_G
##bone Gene_EXP:ACTR3B 19_5680513_A_C
##bone Gene_EXP:ACVR1B 1_26457907_T_G
##bone Gene_EXP:ACVR2B 20_10639627_G_A
##bone Gene_EXP:ADAM19 14_68882917_A_G,22_21127217_C_G,22_21283300_G_C
##bone Gene_EXP:ADRB1 1_26457907_T_G
##bone Gene_EXP:ADRB3 1_26457907_T_G
##bone Gene_EXP:AHNAK2 3_52520584_A_C
##bone Gene_EXP:AKAP7 1_26457907_T_G
##bone Gene_EXP:ALDH5A1 2_100470432_G_A,2_100470504_C_T,2_100470642_C_T,2_178612907_A_C
##bone Gene_EXP:ALG6 1_26457907_T_G
##bone Gene_EXP:ALS2CR8 7_5300364_T_G,11_64118302_A_C
##bone Gene_EXP:ANKRD28 1_26457907_T_G
##bone Gene_EXP:ANXA11 1_26457907_T_G
##bone Gene_EXP:APOBEC3B 9_131134849_T_C
##bone Gene_EXP:ARHGAP19 22_22643666_C_G
##bone Gene_EXP:ARHGAP44 16_55810697_G_T,16_55813139_C_T
##bone Gene_EXP:ARID2 1_26457907_T_G
##bone Gene_EXP:ASGR1 1_26457907_T_G,5_141432375_A_C,15_42142087_A_C,22_21127217_C_G,22_22643666_C_G
##bone Gene_EXP:ASPH 1_183122094_C_G,3_180647255_T_TA
##bone Gene_EXP:ASRGL1 6_151015603_C_G
##bone Gene_EXP:ATG10 3_120173274_C_G
##bone Gene_EXP:ATP11C 1_26457907_T_G
##bone Gene_EXP:ATP1A1 1_26457907_T_G
##bone Gene_EXP:ATP1B2 16_3027533_A_G
##bone Gene_EXP:ATP2B3 1_26457907_T_G,17_7604041_A_C
##bone Gene_EXP:ATP6V0B 1_9850602_T_G
##bone Gene_EXP:AXL 4_42616004_T_TA,4_42616121_A_G
##bone Gene_EXP:BAHCC1 9_39360952_G_A
##bone Gene_EXP:BAZ2A 19_46321845_A_C
##bone Gene_EXP:BAZ2B 2_97167816_C_T
##bone Gene_EXP:BCL11B 1_26457907_T_G,5_141432375_A_C,22_22643666_C_G
##bone Gene_EXP:BDKRB1 22_22643666_C_G
##bone Gene_EXP:BHLHE22 1_26457907_T_G,22_21127217_C_G
##bone Gene_EXP:BMP4 15_69422319_A_C
##bone Gene_EXP:BRF2 7_37907554_A_G,22_21283300_G_C
##bone Gene_EXP:BTBD17 1_26457907_T_G
##bone Gene_EXP:C11orf24 1_26457907_T_G,1_214608652_G_A,8_38170001_A_G,15_42142087_A_C
##bone Gene_EXP:C1orf168 14_61530508_C_T
##bone Gene_EXP:C1orf27 15_25177023_G_C
##bone Gene_EXP:C21orf7 21_32784788_C_T
##bone Gene_EXP:C8orf33 1_152805392_A_G,1_152805488_G_A
##bone Gene_EXP:CACHD1 1_26457907_T_G,2_119366546_A_G
##bone Gene_EXP:CACNA1H 1_26457907_T_G
##bone Gene_EXP:CAP1 1_26457907_T_G
##bone Gene_EXP:CASP4 3_180647255_T_TA
##bone Gene_EXP:CCDC80 16_53649037_C_T
##bone Gene_EXP:CCND1 15_69422319_A_C
##bone Gene_EXP:CD44 1_26457907_T_G,1_149813302_A_C,6_151015603_C_G
##bone Gene_EXP:CD59 6_151015603_C_G
##bone Gene_EXP:CDC42EP3 22_21283300_G_C
##bone Gene_EXP:CDK13 1_26457907_T_G,22_30937565_T_G
##bone Gene_EXP:CDS1 1_26457907_T_G,1_219210601_T_G
##bone Gene_EXP:CELSR2 1_26457907_T_G
##bone Gene_EXP:CMBL 17_62701571_G_A
##bone Gene_EXP:CNOT6 22_22643666_C_G
##bone Gene_EXP:COL4A5 3_38092947_A_G
##bone Gene_EXP:COQ5 16_24877133_C_T,20_499958_CAA_C
##bone Gene_EXP:COX19 1_26457907_T_G,22_24658344_C_G
##bone Gene_EXP:CRIPAK 19_3449070_T_C,6_160247199_T_G,9_107488139_A_C,4_48557504_A_G,9_137101572_A_C
##bone Gene_EXP:CRISPLD1 16_55811012_TA_T
##bone Gene_EXP:CRMP1 1_26457907_T_G,22_21127217_C_G
##bone Gene_EXP:CRYBG3 1_149813302_A_C,22_21127217_C_G
##bone Gene_EXP:CSAD 1_26457907_T_G
##bone Gene_EXP:CSRP2BP 9_79705958_C_T,1_26457907_T_G,17_65225089_T_C,4_8471209_T_C,5_41181389_G_T
##bone Gene_EXP:CSRP2BP 9_79705958_C_T,5_41181389_G_T,1_26457907_T_G,17_65225089_T_C,4_8471209_T_C
##bone Gene_EXP:CSRP3 2_112722995_T_G
##bone Gene_EXP:CTGF 10_99533046_A_G
##bone Gene_EXP:CUX2 22_21127217_C_G
##bone Gene_EXP:CYP2J2 1_26457907_T_G,5_141432375_A_C,15_42142087_A_C
##bone Gene_EXP:CYP4F22 22_21127217_C_G
##bone Gene_EXP:DDO 1_154732996_T_G
##bone Gene_EXP:DFNA5 11_24729296_G_A
##bone Gene_EXP:DGKD 11_62825464_G_C,22_24252424_G_C
##bone Gene_EXP:DKK2 1_26457907_T_G
##bone Gene_EXP:DKK3 11_24729296_G_A
##bone Gene_EXP:DLG2 1_26457907_T_G,22_18847351_G_C,22_21127217_C_G
##bone Gene_EXP:DLGAP1 22_21127217_C_G
##bone Gene_EXP:DMRTA1 7_72949311_A_C
##bone Gene_EXP:DNMT3A 1_26457907_T_G
##bone Gene_EXP:DOCK10 18_76968158_T_C
##bone Gene_EXP:DOCK9 2_87800520_G_A,17_80065379_A_G
##bone Gene_EXP:DPP9 22_21127217_C_G
##bone Gene_EXP:DPYSL5 1_26457907_T_G,22_21127217_C_G
##bone Gene_EXP:DRAP1 1_26457907_T_G
##bone Gene_EXP:DST 22_22643666_C_G
##bone Gene_EXP:DTX3L 1_26457907_T_G
##bone Gene_EXP:E2F5 8_22080213_T_C
##bone Gene_EXP:E2F6 1_26457907_T_G
##bone Gene_EXP:EBF3 1_26457907_T_G
##bone Gene_EXP:EFHD2 1_26457907_T_G,12_48769033_A_C,19_3179506_A_C
##bone Gene_EXP:EFNB1 1_26457907_T_G
##bone Gene_EXP:EGFL7 22_22643666_C_G
##bone Gene_EXP:EGFLAM 2_217817751_A_G,2_217818534_A_G
##bone Gene_EXP:ELL2 22_22643666_C_G
##bone Gene_EXP:ELOVL1 22_24252424_G_C
##bone Gene_EXP:ENC1 1_26457907_T_G,15_69422319_A_C
##bone Gene_EXP:ENDOD1 1_201000288_T_G
##bone Gene_EXP:ENPP3 1_26457907_T_G,22_22643666_C_G
##bone Gene_EXP:EPC1 19_6744459_C_G,19_42723940_A_C
##bone Gene_EXP:EPHA7 3_42691976_T_C,7_100958772_C_T
##bone Gene_EXP:ERO1L 1_26457907_T_G,5_141432375_A_C,10_6515090_A_C
##bone Gene_EXP:EVI2A 1_26457907_T_G
##bone Gene_EXP:EVI2B 10_46462341_C_A
##bone Gene_EXP:EXT2 7_100959168_T_C,7_100959203_T_C
##bone Gene_EXP:EZH2 1_26457907_T_G,22_18847351_G_C
##bone Gene_EXP:FAH 22_22643666_C_G
##bone Gene_EXP:FAIM 10_122983276_G_A,1_26457907_T_G,5_141432375_A_C,22_24252424_G_C,15_84654249_A_C
##bone Gene_EXP:FAM124A 1_26457907_T_G,1_219210601_T_G
##bone Gene_EXP:FAM19A5 22_22643666_C_G
##bone Gene_EXP:FAM69A 4_105679196_A_C
##bone Gene_EXP:FAM84B 13_24951498_G_C
##bone Gene_EXP:FAN1 21_32784788_C_T
##bone Gene_EXP:FBN2 3_52520584_A_C
##bone Gene_EXP:FBXO15 16_3526396_A_T,22_21127217_C_G,22_22643666_C_G
##bone Gene_EXP:FCGRT 1_26457907_T_G,5_141432375_A_C,22_21127217_C_G,22_22643666_C_G
##bone Gene_EXP:FEZF1 1_26457907_T_G,22_22643666_C_G
##bone Gene_EXP:FLII 3_52520584_A_C
##bone Gene_EXP:FNBP1 15_69422319_A_C
##bone Gene_EXP:FOXC1 1_26457907_T_G
##bone Gene_EXP:FOXK2 17_57105517_C_T,17_57110197_C_G
##bone Gene_EXP:FREM1 2_205740456_T_G
##bone Gene_EXP:FRMD6 1_26457907_T_G
##bone Gene_EXP:FSTL3 16_81160923_C_T
##bone Gene_EXP:FUCA2 1_26457907_T_G,5_141432375_A_C,22_18847351_G_C,1_219210601_T_G,22_22643666_C_G
##bone Gene_EXP:FUCA2 5_141432375_A_C,1_26457907_T_G,22_18847351_G_C,1_219210601_T_G,22_22643666_C_G
##bone Gene_EXP:FUT11 1_26457907_T_G,17_79044046_T_C,22_21127217_C_G,22_22643666_C_G,22_24252424_G_C
##bone Gene_EXP:FZD3 1_26457907_T_G
##bone Gene_EXP:GAL 22_20751638_T_G
##bone Gene_EXP:GAL3ST3 1_26457907_T_G
##bone Gene_EXP:GALNT10 13_99295007_C_T,13_99314037_A_G
##bone Gene_EXP:GBE1 1_26457907_T_G,22_22643666_C_G
##bone Gene_EXP:GCNT1 1_26457907_T_G,22_22643666_C_G
##bone Gene_EXP:GDF6 2_75493538_G_A
##bone Gene_EXP:GPC2 5_141432375_A_C
##bone Gene_EXP:GPR155 22_22643666_C_G
##bone Gene_EXP:GSN 2_170993697_G_A
##bone Gene_EXP:GSTA4 17_80065379_A_G
##bone Gene_EXP:GTF2IRD1 13_99295924_C_A,16_4823959_A_C
##bone Gene_EXP:GYG1 3_38550915_A_G,3_38551637_T_TG,5_141432375_A_C,12_52771095_C_G
##bone Gene_EXP:H2AFY2 22_22643666_C_G
##bone Gene_EXP:HIF3A 1_26457907_T_G,16_3027533_A_G
##bone Gene_EXP:HOOK1 1_26457907_T_G
##bone Gene_EXP:HOXB13 1_26457907_T_G
##bone Gene_EXP:HOXD10 1_26457907_T_G
##bone Gene_EXP:HOXD13 1_26457907_T_G
##bone Gene_EXP:HOXD9 5_140829601_T_G
##bone Gene_EXP:HR 1_26457907_T_G
##bone Gene_EXP:HS3ST3B1 5_141432375_A_C,15_42142087_A_C
##bone Gene_EXP:HS3ST4 1_26457907_T_G,12_52771095_C_G
##bone Gene_EXP:ICAM4 1_26457907_T_G
##bone Gene_EXP:IKBIP 5_141636680_A_C
##bone Gene_EXP:IL13RA1 1_26457907_T_G
##bone Gene_EXP:IL1R1 11_66624536_A_C
##bone Gene_EXP:IQGAP1 11_1246628_A_C,12_109139615_A_C
##bone Gene_EXP:IRS2 1_26457907_T_G,15_69422319_A_C,22_22643666_C_G
##bone Gene_EXP:ITFG2 1_26457907_T_G
##bone Gene_EXP:ITGBL1 1_26457907_T_G
##bone Gene_EXP:ITM2A 1_26457907_T_G
##bone Gene_EXP:ITPRIPL1 22_36800827_G_A,22_36800927_C_A
##bone Gene_EXP:IVD 4_144719002_C_T
##bone Gene_EXP:JAKMIP2 22_21127217_C_G
##bone Gene_EXP:JHDM1D 22_21127217_C_G
##bone Gene_EXP:JPH1 1_26457907_T_G,19_32643405_T_C
##bone Gene_EXP:KANSL2 1_26457907_T_G,12_94248247_C_T
##bone Gene_EXP:KAT2B 19_17618863_T_TG,19_17618978_T_G,22_22643666_C_G
##bone Gene_EXP:KDSR 22_21127217_C_G
##bone Gene_EXP:KHK 1_184808038_A_C,17_75517573_T_C
##bone Gene_EXP:KIAA1456 1_26457907_T_G,3_52520584_A_C,15_25177023_G_C,22_21127217_C_G,22_22643666_C_G
##bone Gene_EXP:KIAA1958 1_26457907_T_G
##bone Gene_EXP:KIF2A 11_102186007_C_T
##bone Gene_EXP:KLHL23 1_26457907_T_G,5_141432375_A_C
##bone Gene_EXP:KMO 22_21127217_C_G
##bone Gene_EXP:KRT25 1_26457907_T_G,22_21127217_C_G,22_22643666_C_G,22_24658344_C_G
##bone Gene_EXP:L3MBTL1 8_22080213_T_C
##bone Gene_EXP:LARP4 19_21767500_C_T
##bone Gene_EXP:LGALS1 1_26457907_T_G,11_62825464_G_C,22_22643666_C_G
##bone Gene_EXP:LGALS3 1_26457907_T_G,5_141432375_A_C,1_149813302_A_C,3_51333222_A_C,22_24252424_G_C
##bone Gene_EXP:LGALS3 1_26457907_T_G,9_83001013_C_A,5_141432375_A_C,1_149813302_A_C,7_100760409_A_C
##bone Gene_EXP:LIM2 1_193249713_C_G
##bone Gene_EXP:LIMS1 8_138630731_T_C
##bone Gene_EXP:LINGO1 1_26457907_T_G,11_66624536_A_C,22_21127217_C_G,22_22643666_C_G
##bone Gene_EXP:LIPI 1_26457907_T_G,5_141432375_A_C,15_25177023_G_C
##bone Gene_EXP:LMBR1L 7_72949311_A_C,12_109266204_T_G,20_35697711_A_C
##bone Gene_EXP:LMNA 10_68691523_T_C
##bone Gene_EXP:LMO2 1_26457907_T_G,5_141432375_A_C,11_1246628_A_C,15_25177023_G_C
##bone Gene_EXP:LMO3 1_26457907_T_G
##bone Gene_EXP:LONRF1 1_26457907_T_G,15_42142087_A_C,22_21127217_C_G,22_22643666_C_G
##bone Gene_EXP:LPHN1 1_225937656_T_G,16_3027533_A_G,22_21283300_G_C
##bone Gene_EXP:LPP 1_26457907_T_G
##bone Gene_EXP:LRP10 1_26457907_T_G,12_52771095_C_G,22_22643666_C_G
##bone Gene_EXP:LRRC15 1_161042141_T_G
##bone Gene_EXP:LRRC4B 16_3543521_G_A,16_3590476_C_T,16_3606556_G_A,22_21127217_C_G
##bone Gene_EXP:LRRC4C 12_52771095_C_G
##bone Gene_EXP:LUC7L 15_50544697_C_A,1_26457907_T_G,22_22643666_C_G,22_21127217_C_G,8_1678462_A_C
##bone Gene_EXP:MAMLD1 4_42616004_T_TA,4_42616121_A_G
##bone Gene_EXP:MAN2A2 18_112338_G_A
##bone Gene_EXP:MAP2K1 22_21127217_C_G
##bone Gene_EXP:MAP2K6 6_151015603_C_G
##bone Gene_EXP:MAP3K3 5_23522263_C_T,12_128697174_A_G
##bone Gene_EXP:MCF2 15_42142087_A_C
##bone Gene_EXP:MCFD2 7_102356028_T_G
##bone Gene_EXP:MCU 1_26457907_T_G
##bone Gene_EXP:MDM4 17_6612211_T_C
##bone Gene_EXP:MED23 15_42142087_A_C
##bone Gene_EXP:MEIG1 5_141636680_A_C
##bone Gene_EXP:MEIS1 11_1246619_A_C
##bone Gene_EXP:MGLL 1_26457907_T_G,22_21127217_C_G,22_22643666_C_G
##bone Gene_EXP:MICAL2 6_151015603_C_G
##bone Gene_EXP:MLC1 1_26457907_T_G,7_72941936_T_C
##bone Gene_EXP:MOAP1 20_53576113_T_G
##bone Gene_EXP:MRPS34 3_180647255_T_TA
##bone Gene_EXP:MSRB3 3_52520584_A_C,22_37816755_A_G
##bone Gene_EXP:MYH9 1_26457907_T_G,22_21127217_C_G
##bone Gene_EXP:MYL9 1_26457907_T_G
##bone Gene_EXP:MYOF 1_26457907_T_G,5_141432375_A_C
##bone Gene_EXP:MYOM2 1_26457907_T_G
##bone Gene_EXP:MYST3 14_95533353_T_A
##bone Gene_EXP:NBAS 1_182843301_T_G,2_112783793_A_C
##bone Gene_EXP:NCAPG2 6_146599135_C_T,17_40554659_A_G
##bone Gene_EXP:NCEH1 6_151015603_C_G
##bone Gene_EXP:NCKAP1L 1_26457907_T_G
##bone Gene_EXP:NDST4 1_26457907_T_G,1_219210601_T_G
##bone Gene_EXP:NELL2 1_26457907_T_G,5_141432375_A_C
##bone Gene_EXP:NFE2L3 5_113434330_T_G,22_32394994_C_G,X_119791251_A_C
##bone Gene_EXP:NINL 1_26457907_T_G,22_22643666_C_G
##bone Gene_EXP:NOTCH2 22_21127217_C_G
##bone Gene_EXP:NPW 1_26457907_T_G,3_52520584_A_C,15_69422319_A_C
##bone Gene_EXP:NR0B1 1_26457907_T_G,22_21127217_C_G
##bone Gene_EXP:NRP1 3_180647255_T_TA,15_68718780_C_T
##bone Gene_EXP:NRTN 1_149813302_A_C
##bone Gene_EXP:NSMF 7_45104514_C_T
##bone Gene_EXP:NUCB2 16_19067773_T_G
##bone Gene_EXP:NUDT10 1_26457907_T_G
##bone Gene_EXP:NUDT16 1_26457907_T_G
##bone Gene_EXP:NUP205 17_7604041_A_C
##bone Gene_EXP:OLFM3 22_22643666_C_G
##bone Gene_EXP:OLFML2B 8_21909794_T_G
##bone Gene_EXP:ORAOV1 15_69422319_A_C
##bone Gene_EXP:PALM3 22_22643666_C_G
##bone Gene_EXP:PAPSS2 17_7388330_T_G
##bone Gene_EXP:PAX7 1_26457907_T_G
##bone Gene_EXP:PCDH17 1_26457907_T_G,5_141432375_A_C
##bone Gene_EXP:PCDH8 12_52771095_C_G
##bone Gene_EXP:PCMTD2 1_24336413_G_C,1_26457907_T_G
##bone Gene_EXP:PDE6B 15_42142087_A_C
##bone Gene_EXP:PDE9A 19_5654163_A_C,22_19918884_A_C
##bone Gene_EXP:PDS5B 19_5654163_A_C
##bone Gene_EXP:PDSS1 15_89633846_A_C,22_39376109_T_G
##bone Gene_EXP:PENK 22_46668940_A_C
##bone Gene_EXP:PFKFB4 2_48582490_G_T
##bone Gene_EXP:PHLDA1 6_151015603_C_G
##bone Gene_EXP:PLD6 22_21127217_C_G,22_21283300_G_C
##bone Gene_EXP:PLIN3 10_92024747_C_T
##bone Gene_EXP:PLK2 1_26457907_T_G
##bone Gene_EXP:PLP2 16_24862746_A_C
##bone Gene_EXP:PMP22 22_22117666_G_A,22_22117820_G_A
##bone Gene_EXP:PNISR 15_42142087_A_C
##bone Gene_EXP:PNMAL1 1_26457907_T_G
##bone Gene_EXP:POU3F1 1_26457907_T_G,22_22643666_C_G
##bone Gene_EXP:POU3F2 1_26457907_T_G,1_205381583_C_G,1_219210601_T_G,3_52520584_A_C,5_141432375_A_C
##bone Gene_EXP:POU4F1 X_149503442_T_G
##bone Gene_EXP:PPAPDC2 1_26457907_T_G,8_22080213_T_C,15_42142087_A_C,19_3179506_A_C,22_22643666_C_G
##bone Gene_EXP:PPARD 15_25177023_G_C
##bone Gene_EXP:PPFIBP1 3_180647255_T_TA
##bone Gene_EXP:PPIB 12_31206191_C_T
##bone Gene_EXP:PPP1R1A 1_26457907_T_G,5_141432375_A_C
##bone Gene_EXP:PPP1R1B 1_109626825_A_C,6_53899709_T_G,7_99012221_A_C
##bone Gene_EXP:PPP2R2A 9_39361570_C_A,13_20189082_A_C,12_52771095_C_G,1_26457907_T_G,3_126068075_T_G
##bone Gene_EXP:PRDM15 1_26457907_T_G
##bone Gene_EXP:PRKCA 14_39074610_T_TAAG
##bone Gene_EXP:PRRX2 3_180647255_T_TA
##bone Gene_EXP:PRSS35 1_26457907_T_G
##bone Gene_EXP:PTBP2 15_59682341_T_A
##bone Gene_EXP:PTGER2 20_49068783_G_C
##bone Gene_EXP:PTGER3 1_26457907_T_G,1_219210601_T_G
##bone Gene_EXP:PTGES3 1_26457907_T_G,1_149813302_A_C
##bone Gene_EXP:PTPN13 1_26457907_T_G
##bone Gene_EXP:PURG 5_141432375_A_C
##bone Gene_EXP:QSER1 6_31464043_C_T
##bone Gene_EXP:RAB32 1_26457907_T_G,5_141477711_A_G,15_92992967_C_T
##bone Gene_EXP:RAI14 1_26457907_T_G
##bone Gene_EXP:RAP1GAP 1_26457907_T_G
##bone Gene_EXP:RAVER2 1_26457907_T_G
##bone Gene_EXP:RBM11 1_26457907_T_G,19_624780_A_G,5_141432375_A_C,8_109483107_T_G,12_52771095_C_G
##bone Gene_EXP:RBM11 1_26457907_T_G,19_624780_A_G,5_141432375_A_C,8_109483107_T_G,22_18847351_G_C
##bone Gene_EXP:RBM11 1_26457907_T_G,5_141432375_A_C,19_624780_A_G,8_109483107_T_G,12_52771095_C_G
##bone Gene_EXP:RBM12B 8_131984112_C_T
##bone Gene_EXP:RBM27 19_48617887_T_G
##bone Gene_EXP:RBM33 1_26457907_T_G
##bone Gene_EXP:RBM39 1_26457907_T_G
##bone Gene_EXP:RCAN1 22_22643666_C_G
##bone Gene_EXP:RCOR1 1_176702776_TGAGAGAGA_T
##bone Gene_EXP:RECQL 22_21127217_C_G
##bone Gene_EXP:REEP5 1_26457907_T_G
##bone Gene_EXP:RHBDD2 1_26457907_T_G,22_30937565_T_G
##bone Gene_EXP:RHOC 1_26457907_T_G,5_141432375_A_C,22_22643666_C_G
##bone Gene_EXP:RHOH 22_21127217_C_G
##bone Gene_EXP:RND2 1_26457907_T_G
##bone Gene_EXP:RPAIN 10_68691523_T_C
##bone Gene_EXP:RPAP3 16_3027533_A_G
##bone Gene_EXP:RPN1 1_26457907_T_G,5_141432375_A_C,22_22643666_C_G
##bone Gene_EXP:RUNX1 1_26457907_T_G
##bone Gene_EXP:SALL2 22_22643666_C_G
##bone Gene_EXP:SBNO1 3_75668889_C_T,20_499958_CAA_C
##bone Gene_EXP:SCNN1G 1_26457907_T_G
##bone Gene_EXP:SDC1 1_26457907_T_G,3_52520584_A_C
##bone Gene_EXP:SEC23A 1_26457907_T_G,5_141432375_A_C
##bone Gene_EXP:SEPSECS 2_28529292_G_T
##bone Gene_EXP:SERPING1 1_151048750_A_C,19_4930892_T_G
##bone Gene_EXP:SFXN3 10_68691523_T_C
##bone Gene_EXP:SH3GLB1 22_22643666_C_G
##bone Gene_EXP:SHC2 19_54631904_A_C
##bone Gene_EXP:SIAH3 1_26457907_T_G,15_69422319_A_C
##bone Gene_EXP:SLAIN1 1_26457907_T_G,22_21127217_C_G
##bone Gene_EXP:SLC10A3 4_87047646_A_T
##bone Gene_EXP:SLC19A3 1_26457907_T_G
##bone Gene_EXP:SLC24A3 22_22643666_C_G
##bone Gene_EXP:SLC25A46 22_22643666_C_G
##bone Gene_EXP:SLC35F1 1_26457907_T_G
##bone Gene_EXP:SLC35F3 15_42142087_A_C
##bone Gene_EXP:SLC5A6 1_184808038_A_C,X_46860063_C_T
##bone Gene_EXP:SLCO5A1 1_26457907_T_G
##bone Gene_EXP:SLITRK3 1_26457907_T_G,12_52771095_C_G
##bone Gene_EXP:SNAI2 1_1657293_A_T,1_1657294_AGCG_A
##bone Gene_EXP:SOX11 1_26457907_T_G,5_141432375_A_C,22_21127217_C_G
##bone Gene_EXP:SPATA6L 1_26457907_T_G,8_1678462_A_C
##bone Gene_EXP:SPOCD1 1_26457907_T_G
##bone Gene_EXP:ST5 4_36107787_C_G,4_36147491_C_T
##bone Gene_EXP:STMN3 6_110102054_T_G
##bone Gene_EXP:STRBP 16_55810697_G_T,22_21127217_C_G,22_22643666_C_G
##bone Gene_EXP:SUCLG2 3_160423378_C_T
##bone Gene_EXP:SYNC 15_42142087_A_C
##bone Gene_EXP:SYNJ2 2_119366546_A_G
##bone Gene_EXP:TADA1 3_180647255_T_TA
##bone Gene_EXP:TCEAL3 1_214608652_G_A,5_33549454_C_A
##bone Gene_EXP:TCF12 15_69422319_A_C
##bone Gene_EXP:TEKT2 1_26457907_T_G
##bone Gene_EXP:TFCP2 19_55796171_G_T
##bone Gene_EXP:TGFB1I1 1_149813302_A_C
##bone Gene_EXP:TGM2 19_2118693_C_T
##bone Gene_EXP:TGS1 12_52771095_C_G
##bone Gene_EXP:TMEM127 22_22643666_C_G,22_37816755_A_G
##bone Gene_EXP:TMEM14C 6_31662464_C_T
##bone Gene_EXP:TMEM170B 1_26457907_T_G
##bone Gene_EXP:TMEM209 2_205740456_T_G
##bone Gene_EXP:TMEM214 14_21019887_G_C
##bone Gene_EXP:TMEM229A 22_22643666_C_G
##bone Gene_EXP:TMEM70 1_26457907_T_G,10_35032524_A_C
##bone Gene_EXP:TMEM81 19_7056560_G_T
##bone Gene_EXP:TMEM9B 1_26457907_T_G,11_120298301_A_C
##bone Gene_EXP:TNIP1 3_180647255_T_TA
##bone Gene_EXP:TNKS 8_12359048_T_C
##bone Gene_EXP:TOM1 1_20666326_G_C
##bone Gene_EXP:TP53BP2 22_21127217_C_G
##bone Gene_EXP:TP53I3 12_124966731_T_C
##bone Gene_EXP:TRAM2 1_26457907_T_G,22_21127217_C_G
##bone Gene_EXP:TRAPPC1 15_65451964_A_G,16_18896782_A_AAT
##bone Gene_EXP:TRIM69 22_21127217_C_G
##bone Gene_EXP:TRPM4 1_26457907_T_G,22_21127217_C_G,22_22643666_C_G
##bone Gene_EXP:TTC12 11_1246619_A_C
##bone Gene_EXP:TXNDC15 7_90309274_C_G,12_121016539_T_A
##bone Gene_EXP:UBXN7 1_26457907_T_G,22_24252424_G_C
##bone Gene_EXP:UGT3A2 1_26457907_T_G
##bone Gene_EXP:UHMK1 6_31464043_C_T,6_31710251_C_T
##bone Gene_EXP:USP21 22_22643666_C_G
##bone Gene_EXP:USP44 7_155711220_A_C,15_69422319_A_C
##bone Gene_EXP:VANGL2 22_22643666_C_G
##bone Gene_EXP:VAX1 1_26457907_T_G,22_21127217_C_G
##bone Gene_EXP:VCL 5_141432375_A_C
##bone Gene_EXP:VGLL1 2_33188942_T_A
##bone Gene_EXP:VPS37D 7_72941936_T_C,1_26457907_T_G
##bone Gene_EXP:WASF1 22_21127217_C_G,22_22643666_C_G
##bone Gene_EXP:WDR1 12_122976696_T_G
##bone Gene_EXP:WDR41 2_217818534_A_G
##bone Gene_EXP:WDR60 1_26457907_T_G
##bone Gene_EXP:WIPI1 1_26457907_T_G
##bone Gene_EXP:WNK2 1_26457907_T_G
##bone Gene_EXP:WWOX 22_21127217_C_G
##bone Gene_EXP:XG 1_26457907_T_G,22_21127217_C_G
##bone Gene_EXP:XKR4 1_26457907_T_G,12_52771095_C_G,22_21127217_C_G
##bone Gene_EXP:ZBTB34 6_151015603_C_G,11_1244522_A_C
##bone Gene_EXP:ZCCHC5 22_22643666_C_G
##bone Gene_EXP:ZDHHC17 1_26457907_T_G
##bone Gene_EXP:ZNF232 5_141432375_A_C,6_32040790_G_C
##bone Gene_EXP:ZNF335 1_26457907_T_G
##bone Gene_EXP:ZNF397 1_26457907_T_G,15_56693096_A_C,22_21127217_C_G,22_22643666_C_G
##bone Gene_EXP:ZNF467 5_157491842_C_T,17_78120770_A_C,22_21283300_G_C
##bone Gene_EXP:ZNF607 12_56086744_A_C,12_121534367_T_A,17_42521150_A_C
##bone Gene_EXP:ZNF703 10_71362188_T_C,15_42142087_A_C,19_3179506_A_C,22_22643666_C_G
##bone Gene_EXP:ZNF786 1_26457907_T_G,16_25177910_T_G,17_7604041_A_C,17_78120770_A_C,22_30937565_T_G
##bone Gene_EXP:ZNF862 1_26457907_T_G,22_22759034_G_A
[표 12]에 제시된 FRH 들이 해당 유전자(gene) 발현과의 상관도(P-value)를 산출한 결과가 아래 [표 13]에 정리되어있다.
또한, [표 12]에 제시된 FRH들이 포함되어 발현된 유전자들 중 주요 유전자와 각각의 bone(육종암) 약물과의 상관도(P-value)를 산출한 결과가 아래 [도 30]에 정리되어있다.
Correlation between gene expression and FRH
Gene pvalue(FRH-Gene_exp) Gene pvalue(FRH-Gene_exp) Gene pvalue(FRH-Gene_exp)
LUC7L 1.15E-13 ADAM19 1.10E-07 KIAA0141 8.93E-07
TPM4 1.07E-11 PLK2 1.10E-07 KHK 9.12E-07
NUDT11 1.60E-11 LEAP2 1.11E-07 TMEM70 9.15E-07
PURG 4.30E-11 ZNF467 1.11E-07 MSI1 9.35E-07
TUBB2B 4.81E-11 APOL3 1.13E-07 IL11 9.36E-07
TGFBR2 5.51E-11 KDELR3 1.14E-07 GFRA2 9.37E-07
RHOC 5.76E-11 PCDH17 1.14E-07 EFNA3 9.38E-07
ST6GAL1 7.69E-11 CFL2 1.15E-07 SLC25A43 9.39E-07
KLHL23 8.77E-11 EXT2 1.15E-07 ABAT 9.48E-07
FUCA2 9.85E-11 LPAR2 1.16E-07 NAGA 9.50E-07
NINL 9.85E-11 KDSR 1.17E-07 MT2A 9.53E-07
MGLL 1.10E-10 ATP2B3 1.18E-07 NGF 9.67E-07
NKX2-2 1.20E-10 TMEM14C 1.20E-07 PCP4 9.72E-07
ARHGAP10 1.29E-10 TTC12 1.21E-07 COPG 9.86E-07
DPP9 1.58E-10 JHDM1D 1.21E-07 TXNDC11 9.96E-07
RBM11 1.92E-10 CORO1C 1.22E-07 SRSF6 9.97E-07
ACTN1 1.95E-10 CDK13 1.23E-07 SPAST 9.98E-07
FCGRT 2.01E-10 FNDC3B 1.23E-07 CPD 1.02E-06
JAKMIP2 2.32E-10 TCIRG1 1.24E-07 ZNF250 1.02E-06
GYG1 2.51E-10 ATP11C 1.24E-07 NPW 1.03E-06
FAM19A5 2.59E-10 PPIL6 1.26E-07 ADNP 1.03E-06
EPHA4 2.73E-10 WASF1 1.26E-07 CACNA1H 1.03E-06
MYH9 4.61E-10 CCDC59 1.27E-07 ITGAE 1.03E-06
ZNF397 4.81E-10 FNBP1 1.29E-07 PKP1 1.03E-06
TMEM9B 4.87E-10 MAP4K5 1.30E-07 PTPN21 1.04E-06
MYOF 4.88E-10 OSCP1 1.33E-07 IRF1 1.04E-06
ARID2 4.89E-10 ATP5G2 1.34E-07 SRPRB 1.05E-06
CLSTN2 5.02E-10 LACTB 1.35E-07 AGT 1.05E-06
NOTCH2 5.05E-10 OSTF1 1.35E-07 ZC3HC1 1.05E-06
ASGR1 5.14E-10 CCDC23 1.39E-07 COL6A1 1.06E-06
PPP1R1A 5.38E-10 FAM124A 1.41E-07 ADAMTS6 1.08E-06
ACVR1B 5.88E-10 NPTXR 1.41E-07 SNAPC4 1.08E-06
EEA1 5.97E-10 ANXA11 1.42E-07 ZNF709 1.08E-06
ACTN2 6.01E-10 MYCN 1.44E-07 PBRM1 1.09E-06
GPC2 6.03E-10 STK35 1.44E-07 PHF14 1.10E-06
NKX6-1 6.10E-10 ZNF74 1.47E-07 TP53BP2 1.10E-06
FANCF 6.17E-10 SV2B 1.48E-07 PCMTD2 1.11E-06
SOX11 6.17E-10 PPAPDC2 1.48E-07 IGSF9 1.12E-06
VANGL2 6.29E-10 ARL6IP5 1.49E-07 PAPSS1 1.12E-06
TEAD2 7.31E-10 PRKCE 1.49E-07 CDC42EP3 1.14E-06
TNIP1 8.84E-10 DPYSL2 1.52E-07 ESYT2 1.14E-06
SPATA6L 9.42E-10 CTSA 1.53E-07 CD83 1.15E-06
LRP10 9.62E-10 NUDT16 1.54E-07 ASRGL1 1.16E-06
MYL6B 9.88E-10 MYL9 1.54E-07 PLCH1 1.17E-06
ZNF703 9.89E-10 DST 1.55E-07 HIVEP2 1.18E-06
PPARD 1.06E-09 ARHGAP19 1.59E-07 GCHFR 1.19E-06
CNOT6 1.29E-09 PLD6 1.61E-07 VASP 1.19E-06
LMO2 1.32E-09 PDIK1L 1.61E-07 ZNF253 1.19E-06
DPYSL5 1.37E-09 FOXC1 1.61E-07 ARHGAP1 1.19E-06
LGALS1 1.81E-09 NR0B1 1.63E-07 CYP2J2 1.20E-06
FUT11 1.90E-09 ARHGAP5 1.64E-07 CADM4 1.21E-06
CRMP1 1.99E-09 FAM84B 1.65E-07 CPB2 1.22E-06
OLFM3 2.12E-09 SS18L1 1.67E-07 SP100 1.23E-06
HMCN1 2.13E-09 BMP4 1.69E-07 STEAP2 1.23E-06
IL13RA1 2.24E-09 ADRB1 1.69E-07 ZNF142 1.24E-06
KIAA1456 2.30E-09 ITM2A 1.76E-07 ATG3 1.24E-06
PALM3 2.42E-09 TGOLN2 1.81E-07 BRD1 1.26E-06
STRBP 2.46E-09 CCDC74A 1.82E-07 RPS27L 1.26E-06
ID2 2.49E-09 RECQL 1.83E-07 TRIM8 1.26E-06
CSRP2BP 2.49E-09 KRT25 1.85E-07 FNBP1L 1.27E-06
DLG2 2.53E-09 SHC2 1.89E-07 PDE6B 1.27E-06
WIPI1 2.66E-09 SLCO5A1 1.90E-07 SLC25A46 1.28E-06
LIPI 2.74E-09 DNASE1L1 1.91E-07 SH3GLB1 1.29E-06
BCL11B 2.86E-09 GPR155 1.91E-07 RHOA 1.30E-06
SLC24A3 2.90E-09 PTGES3 1.93E-07 SH3YL1 1.31E-06
FAM114A1 3.02E-09 CNN3 1.94E-07 RABGAP1 1.34E-06
SHANK3 3.09E-09 FOSL2 1.96E-07 PTGER3 1.35E-06
THAP9 3.13E-09 HAND2 1.97E-07 NAA25 1.36E-06
ERO1L 3.14E-09 PLIN3 2.06E-07 SMAD9 1.37E-06
SLAIN1 3.34E-09 BDKRB1 2.07E-07 ROM1 1.37E-06
UBTD1 3.56E-09 SDC1 2.10E-07 CD44 1.38E-06
RAB7A 3.57E-09 NPY1R 2.16E-07 MBD6 1.39E-06
CCDC74B 3.60E-09 PTRF 2.17E-07 RHOG 1.41E-06
TEKT2 3.64E-09 CCSER2 2.19E-07 RASA3 1.41E-06
ERC2 3.75E-09 BDNF 2.21E-07 CAPRIN1 1.43E-06
ELOVL1 3.82E-09 LRRC4B 2.24E-07 GPR135 1.43E-06
TMEM206 4.01E-09 SLFN11 2.26E-07 KIT 1.44E-06
SWT1 4.09E-09 TMEM68 2.27E-07 TADA1 1.45E-06
EZH2 4.21E-09 EPC1 2.27E-07 TBC1D2 1.46E-06
UBE2G2 4.66E-09 CAP1 2.28E-07 GSTA4 1.47E-06
HEATR5A 4.70E-09 DDHD2 2.30E-07 TMPO 1.48E-06
BHLHE22 4.82E-09 TMEM214 2.31E-07 CLIP1 1.48E-06
DHX57 5.00E-09 03-Sep 2.33E-07 PRPS2 1.48E-06
IVNS1ABP 5.01E-09 PCDH8 2.34E-07 DRAP1 1.48E-06
PNMA2 5.01E-09 SH3D19 2.41E-07 BCL7A 1.50E-06
CRTAP 5.13E-09 RAI14 2.41E-07 KIAA1958 1.50E-06
C1orf27 5.14E-09 CACHD1 2.43E-07 CSRNP3 1.52E-06
EVI2A 5.23E-09 PPIC 2.45E-07 TRAPPC9 1.55E-06
GBE1 5.25E-09 RPAP3 2.49E-07 SIAH3 1.56E-06
WWTR1 5.44E-09 BTG2 2.49E-07 NME4 1.57E-06
ANKRD28 5.48E-09 RASGEF1B 2.52E-07 CCDC85B 1.57E-06
LONRF1 5.51E-09 E2F6 2.52E-07 CCDC80 1.57E-06
IRS2 5.52E-09 EFCAB7 2.54E-07 BTBD17 1.57E-06
PRSS35 5.61E-09 SLC35F1 2.58E-07 LMNA 1.57E-06
LEPROTL1 5.62E-09 NYNRIN 2.60E-07 FUT8 1.58E-06
NELL2 5.72E-09 SLITRK3 2.63E-07 DNAJC12 1.59E-06
XKR4 5.75E-09 GRP 2.63E-07 SPOCD1 1.60E-06
NCKAP1L 5.85E-09 STMN3 2.63E-07 ZNF862 1.60E-06
ZNF84 6.22E-09 PDE3B 2.68E-07 CARD10 1.60E-06
ZNF232 6.23E-09 ZNF740 2.72E-07 AP3S1 1.63E-06
PPP2R2A 6.49E-09 SEC11C 2.74E-07 TP53I3 1.65E-06
BRF2 6.92E-09 FAM120A 2.77E-07 NDUFC1 1.66E-06
RPN1 7.16E-09 B4GALT4 2.78E-07 CRABP1 1.66E-06
SAMD4A 7.16E-09 FAM69A 2.82E-07 RAB31 1.66E-06
EPB41 7.17E-09 ZNF219 2.84E-07 RNF44 1.67E-06
HS3ST3B1 7.33E-09 ZNF607 2.91E-07 TBC1D23 1.68E-06
POU3F2 7.57E-09 RBMX 2.92E-07 PLCXD1 1.69E-06
S100A13 7.61E-09 LPHN1 2.94E-07 HOOK1 1.69E-06
FBXO15 7.64E-09 SEC61A1 2.95E-07 CRYBG3 1.69E-06
PNMAL1 7.74E-09 AKAP7 2.96E-07 PRIMA1 1.71E-06
SEC23A 7.94E-09 TRIM47 2.96E-07 PBX1 1.71E-06
LRRC4C 8.57E-09 C2CD4C 2.96E-07 ELOVL4 1.71E-06
CPED1 8.66E-09 SMARCC1 2.97E-07 SPAG1 1.72E-06
TRPM4 8.83E-09 RBM33 3.03E-07 RRBP1 1.72E-06
SYNC 8.87E-09 UBXN7 3.05E-07 CEP19 1.72E-06
PDE9A 9.07E-09 BHLHE40 3.08E-07 GSN 1.74E-06
ACOT9 9.27E-09 MYST3 3.10E-07 PPFIBP1 1.76E-06
CHPF 9.30E-09 NEIL1 3.10E-07 MAST1 1.78E-06
GALNT10 9.85E-09 FAM69B 3.12E-07 TRIM69 1.78E-06
CTSL1 1.02E-08 RNF182 3.13E-07 OSBPL3 1.79E-06
AIG1 1.05E-08 CREBBP 3.13E-07 SPEN 1.80E-06
NDST4 1.06E-08 TGS1 3.14E-07 RBBP5 1.81E-06
SRSF12 1.10E-08 DDX51 3.18E-07 RBM12B 1.81E-06
BAHCC1 1.23E-08 CELSR2 3.20E-07 PIGK 1.83E-06
BCL10 1.32E-08 IL1R1 3.21E-07 COL6A2 1.83E-06
MFSD1 1.33E-08 ADAM12 3.22E-07 TXNL4A 1.84E-06
MYOM2 1.42E-08 E2F5 3.22E-07 RNF181 1.84E-06
DTX3L 1.42E-08 CXCR4 3.30E-07 CD163L1 1.87E-06
PLOD1 1.44E-08 CHD6 3.34E-07 PHF2 1.89E-06
H2AFY2 1.47E-08 PPIB 3.34E-07 GPC1 1.90E-06
PLAGL2 1.51E-08 CHD3 3.40E-07 LMO3 1.90E-06
KBTBD11 1.52E-08 CYLD 3.47E-07 GABBR1 1.92E-06
GLB1L2 1.54E-08 CREB3L1 3.52E-07 KCNMA1 1.93E-06
CYR61 1.57E-08 RFTN1 3.54E-07 ERLEC1 1.93E-06
MGAT2 1.59E-08 ATAT1 3.56E-07 B4GALT7 1.93E-06
XG 1.60E-08 N4BP2 3.60E-07 HNRNPH3 1.94E-06
CMTM7 1.67E-08 RAP1GAP 3.61E-07 PLEKHF1 1.94E-06
DNAJC15 1.70E-08 YBX2 3.62E-07 HNRNPA1L2 1.95E-06
PIK3CB 1.72E-08 EOGT 3.65E-07 TLN1 1.98E-06
CDS1 1.75E-08 POU6F1 3.67E-07 TCEAL3 2.00E-06
IQGAP1 1.78E-08 ZSCAN2 3.70E-07 HK1 2.00E-06
TMEM127 1.79E-08 MYEF2 3.74E-07 ZNF335 2.00E-06
TPTE2 1.83E-08 CLTB 3.77E-07 MME 2.01E-06
SALL2 1.88E-08 PGLYRP2 3.79E-07 ANKRD37 2.02E-06
ENPP3 1.94E-08 RHBDD2 3.81E-07 GDF6 2.04E-06
IGF2BP1 1.97E-08 NRP1 3.83E-07 ZBTB16 2.05E-06
KAT2B 2.01E-08 COX19 3.85E-07 SYNM 2.06E-06
KLF4 2.03E-08 AKT1 3.94E-07 STX5 2.06E-06
VAX1 2.05E-08 ZNF124 3.96E-07 CA12 2.09E-06
MARCKSL1 2.07E-08 SPHK1 3.99E-07 SNAI2 2.10E-06
USP21 2.14E-08 KLRAP1 4.06E-07 DDX31 2.10E-06
EGFLAM 2.21E-08 SPRYD7 4.10E-07 EFNB1 2.11E-06
SUCLG2 2.28E-08 KANSL2 4.10E-07 GATA6 2.12E-06
FAH 2.31E-08 TANC2 4.10E-07 KDM4A 2.13E-06
MAP2K1 2.36E-08 CYBA 4.16E-07 EFS 2.14E-06
GLT25D1 2.42E-08 HEG1 4.17E-07 TMEM38A 2.15E-06
GCNT1 2.45E-08 CDKL3 4.19E-07 SET 2.16E-06
TMEM79 2.48E-08 ITPRIPL2 4.23E-07 GAS1 2.19E-06
ZSCAN21 2.52E-08 S100A6 4.30E-07 TLE4 2.20E-06
ITFG2 2.52E-08 MCF2 4.31E-07 FAM174A 2.20E-06
UGT3A2 2.56E-08 CCNJ 4.40E-07 BTD 2.22E-06
SECISBP2 2.59E-08 SLC26A10 4.43E-07 FGF11 2.23E-06
PLOD2 2.72E-08 TLE2 4.47E-07 OSBPL10 2.26E-06
RAB32 2.72E-08 SCNN1G 4.49E-07 ELAVL3 2.28E-06
PMP22 2.76E-08 OAT 4.52E-07 GBF1 2.30E-06
OTUD3 2.79E-08 SGMS2 4.52E-07 PRTG 2.34E-06
MLC1 2.89E-08 TMEM81 4.54E-07 SEPP1 2.34E-06
TRAM2 2.99E-08 ICAM3 4.56E-07 CTSZ 2.38E-06
PAX7 3.04E-08 TXNDC15 4.59E-07 CD55 2.40E-06
ZDHHC17 3.22E-08 SOX6 4.59E-07 CCK 2.41E-06
ITGB1 3.28E-08 RUNX1 4.61E-07 RBMS3 2.41E-06
EGFL7 3.28E-08 CHN2 4.68E-07 CD63 2.41E-06
HEXB 3.29E-08 SLC35B2 4.82E-07 HIPK1 2.42E-06
DGKD 3.35E-08 IL4R 4.83E-07 B4GALNT4 2.43E-06
ALG6 3.42E-08 ADAM9 4.83E-07 AGPHD1 2.43E-06
CUX2 3.45E-08 ACTN4 4.94E-07 MAZ 2.47E-06
TCF3 3.47E-08 RALGAPA2 4.98E-07 FOSL1 2.48E-06
RIMS3 3.51E-08 GM2A 4.99E-07 CD68 2.52E-06
VCL 3.53E-08 DKK2 5.00E-07 HSDL1 2.53E-06
POU3F1 3.55E-08 FLAD1 5.08E-07 CSPG5 2.53E-06
PARD6B 3.64E-08 NRP2 5.09E-07 RBM39 2.54E-06
FEZF1 3.65E-08 PRRT2 5.10E-07 ATN1 2.55E-06
PHACTR2 3.73E-08 PARVA 5.16E-07 PDLIM1 2.55E-06
RND2 3.80E-08 ARX 5.19E-07 RNF2 2.56E-06
IGFBP2 3.87E-08 ZNF704 5.20E-07 SLC35F5 2.56E-06
DLGAP1 3.88E-08 SAMD9L 5.22E-07 PLSCR1 2.56E-06
ADRB3 3.94E-08 GRIK5 5.23E-07 GAL3ST3 2.58E-06
FRMD6 4.15E-08 CPVL 5.30E-07 AXL 2.58E-06
GOLIM4 4.16E-08 SOHLH2 5.32E-07 SYT1 2.58E-06
CBX2 4.22E-08 TTLL6 5.33E-07 HMGB3 2.59E-06
MEIS1 4.33E-08 PROCA1 5.41E-07 PER3 2.63E-06
ABHD6 4.44E-08 SLC2A10 5.43E-07 ZNF271 2.63E-06
ATOX1 4.45E-08 KIF1A 5.44E-07 CYTH3 2.63E-06
EHD2 4.47E-08 PPAP2B 5.44E-07 CDH23 2.65E-06
C1QTNF3 4.47E-08 IKBIP 5.47E-07 TMEM184B 2.66E-06
RIN1 4.49E-08 C9orf89 5.52E-07 PPP2R3A 2.67E-06
LGALS3 4.62E-08 ACVR2B 5.53E-07 PCSK1N 2.67E-06
RAVER2 4.66E-08 ENC1 5.58E-07 RBBP6 2.71E-06
CREB3L2 4.70E-08 ENDOD1 5.64E-07 ZNF532 2.71E-06
BCAR3 4.70E-08 MOB1A 5.64E-07 DNAJB12 2.73E-06
ZNF589 4.72E-08 SPTBN1 5.65E-07 SCP2 2.73E-06
ZNF345 4.73E-08 USP31 5.66E-07 UPF3B 2.74E-06
ACACB 4.82E-08 RPAIN 5.71E-07 GPR180 2.75E-06
HS3ST4 4.84E-08 UCHL1 5.74E-07 QSOX1 2.76E-06
EFHD2 4.89E-08 CSAD 5.75E-07 SPATS2L 2.76E-06
05-Sep 4.89E-08 TNFRSF12A 5.87E-07 ZFP62 2.78E-06
ICAM4 4.91E-08 THBS1 5.89E-07 FKBP4 2.79E-06
TMED1 4.99E-08 DUSP26 5.90E-07 SEMA5A 2.80E-06
UBE2I 5.07E-08 MFAP4 5.93E-07 WNK2 2.80E-06
LINGO1 5.31E-08 TMEM98 5.93E-07 CLIC1 2.81E-06
BCAP29 5.50E-08 GOLGB1 5.95E-07 PDE7A 2.82E-06
FAM117B 5.51E-08 MREG 6.00E-07 SCN4B 2.82E-06
NUDT10 5.56E-08 FREM1 6.01E-07 WIPF1 2.83E-06
WWOX 5.61E-08 C1GALT1 6.01E-07 SP140L 2.83E-06
PTPN13 5.72E-08 PPFIA3 6.04E-07 ART3 2.85E-06
MICAL2 5.73E-08 TMX1 6.07E-07 ZBTB39 2.85E-06
SYTL2 5.73E-08 RSU1 6.08E-07 HDAC2 2.90E-06
ACP1 5.75E-08 MAN1A1 6.09E-07 RTN4 2.91E-06
LAMC1 5.78E-08 CALR 6.19E-07 GIPC1 2.91E-06
GADD45B 6.04E-08 CAST 6.27E-07 ZMIZ1 2.92E-06
RCAN1 6.14E-08 THEM4 6.29E-07 MAFF 2.94E-06
LPP 6.18E-08 FGF5 6.32E-07 COQ7 2.97E-06
CD59 6.35E-08 MCU 6.50E-07 L3MBTL3 3.02E-06
MBNL1 6.42E-08 EHBP1 6.54E-07 IQGAP2 3.03E-06
CTGF 6.43E-08 AVPI1 6.56E-07 CYP4F22 3.04E-06
TCP10L 6.47E-08 HOXC13 6.64E-07 CALD1 3.05E-06
OLFM1 6.50E-08 SMARCD1 6.72E-07 RGL1 3.07E-06
NKAIN2 6.51E-08 BAZ2A 6.74E-07 CAMSAP3 3.10E-06
SERPINB1 6.55E-08 ELL2 6.82E-07 GMPPA 3.13E-06
NLGN4X 6.66E-08 NMNAT3 6.91E-07 ARHGAP22 3.17E-06
HR 6.67E-08 ZNF3 6.92E-07 ABTB1 3.17E-06
FAIM 6.79E-08 SLC41A2 6.94E-07 PRR4 3.17E-06
DOC2A 7.17E-08 SQSTM1 6.99E-07 FAM49A 3.22E-06
KLHL8 7.20E-08 MCL1 7.03E-07 SAFB 3.22E-06
FZD3 7.21E-08 ZNF684 7.10E-07 LNPEP 3.23E-06
AMOTL2 7.24E-08 AHNAK2 7.21E-07 ZXDC 3.27E-06
TMEM170B 7.28E-08 SH3RF1 7.25E-07 DKK3 3.32E-06
C11orf24 7.28E-08 MGAT1 7.25E-07 SEC11A 3.34E-06
DNMT3A 7.56E-08 UGGT2 7.36E-07 IL6ST 3.38E-06
HOXB13 7.66E-08 WDR67 7.47E-07 GPR123 3.40E-06
C1orf114 7.80E-08 MSRB3 7.48E-07 NAPB 3.42E-06
CIB1 7.88E-08 IFT81 7.52E-07 MAB21L3 3.48E-06
MEIG1 7.92E-08 PICALM 7.65E-07 SUMF1 3.51E-06
PDSS1 7.95E-08 TOR1AIP1 7.70E-07 ZFHX2 3.54E-06
ACTR6 8.05E-08 WNK3 7.73E-07 IFIT1 3.55E-06
GRTP1 8.09E-08 MDM4 7.82E-07 ALS2CR8 3.57E-06
ITGA3 8.13E-08 TTC7A 7.85E-07 PTPRR 3.57E-06
SGMS1 8.33E-08 AP4B1 7.86E-07 HRSP12 3.59E-06
SFXN3 8.51E-08 PDS5B 7.88E-07 MBNL2 3.62E-06
VIM 8.54E-08 TMEM158 7.99E-07 PDIA3 3.63E-06
FAM19A2 8.67E-08 PAPSS2 8.00E-07 C22orf15 3.63E-06
NAALAD2 8.77E-08 S100A2 8.03E-07 GPX8 3.65E-06
SLC5A6 8.78E-08 ADRA1D 8.06E-07 BAG3 3.70E-06
TPM1 8.79E-08 CAD 8.09E-07 SPTLC3 3.71E-06
HPCAL1 8.91E-08 PRRT4 8.11E-07 THOC1 3.71E-06
JPH1 9.08E-08 GNG12 8.12E-07 WDR1 3.71E-06
PRDM15 9.10E-08 PRDX2 8.12E-07 ZNF711 3.74E-06
REEP5 9.36E-08 PFKM 8.13E-07 ARF6 3.75E-06
PAFAH1B3 9.50E-08 SYNJ2 8.14E-07 SLC19A3 3.78E-06
LHFPL2 9.61E-08 ZNF786 8.26E-07 RPP25 3.79E-06
TREX1 9.92E-08 TSPAN13 8.31E-07
ATP1A1 9.97E-08 APOE 8.35E-07
SHF 1.01E-07 DCBLD1 8.37E-07
KMO 1.04E-07 ZNF48 8.44E-07
HTRA1 1.08E-07 CENPV 8.46E-07
RHOH 1.08E-07 AHNAK 8.56E-07
PRAC 1.08E-07 C4orf29 8.69E-07
PARM1 1.09E-07 MERTK 8.71E-07
LRRFIP2 1.09E-07 GDF11 8.90E-07
PEA15 1.10E-07 NEUROD6 8.93E-07
이들 [표 13] 및 [도 30]으로부터 [표 13] 및 [도 30]에 공통적으로 낮은 P-value값을 갖는 유전자(gene)에 포함된 FRH(s)가 육종암 약물 반응성을 판단하기 위한 바이오마커로 실효성이 높은 것으로 판단할 수 있다.
다음으로, 본 발명에서 기능하플로타입을 이용한 GBLscan을 통하여 산출된, 각 약물타입 별로 약물에 대한 반응성에 영향을 미치는 바이오마커에 대하여 설명한다.
구체적으로, 약물타입(Drug Class)의 구분 별로, ABL의 바이오 마커 158개(표 15참조), CHROMATIN의 바이오 마커 438개(표 17참조), EGFR의 바이오 마커 197개(표 19참조), ERK_MAPK의 바이오 마커 673개(표 21참조), IGFR의 바이오 마커 159개(표 23참조), MITOSIS의 바이오 마커 202개(표 25참조)이다.
아래 [표 15] 내지 [표 25]에는 약물타입 별로 본 발명에 의해 발굴된 바이오 마커가 표시되어 있다. 여기서 바이오 마커의 형태 및 표현 방식은 전술한 암종류별로 구분된 바이오 마커와 동일하다.
특정 pathway & signaling를 표적으로 하는 약물타입(DrugClass) 정의
구분 DrugClass Drugs Pathway & signaling(Target gene & function)
1 ABL Imatinib, GNF-2, Dasatinib, Saracatinib, WH-4-023, Bosutinib, Ponatinib, HG-5-113-01, Nilotinib ABL, SRC, KIT, PDGFR, ABL1,TEC, LOK, LTK, TRCB,
2 CHROMATIN Phenformin, AICA_Ribonucleotide, Daporinad HDAC, RAR, HDAC inhibitor Class I, IIa, IIb, IV; HDAC6, EGFR, G9a(EHMT2), GLP(EHMT1), Q8TEK3 (DOT1L), BRD2, BRD3, BRD4
3 EGFR Gefitinib, Erlotinib, Cetuiximab, Lapatinib, Afatinib, HG-5-88-01, CP724714, Pelitinib ERBB2, EGFR, ADCK4
4 ERK_MAPK Dabrafenib, VX-11e, AZ628, Selumetinib, CI-1040, PD0325901, Selumetinib, Refametinib, Trametinib, TL-2-105, HG6-64-1, PLX-4720, SB590885, SL0101, CMK, FMK, FR=180204 MAP2K1 (MEK1), MAP2K2 (MEK2), BRAF, ERK, RSK, AURKB, PIM3, CRAF, BRAFV600E, TAK, MAP4K5
5 IGFR CSK1904529A, BMS-536924, BMS-754807, Linsitinib IGF1R
6 MITOSIS Dacinostat, JQ1, SGC0946, VNLG/124, UNC0638, Belinostat, CUDC-101, Vorinostat, CAY10603, AR-42, I-BET-762, Tubastatin A, PFI-1, Entinostat, JQ12 AURKB, MPS1, KIF11, AURKA, PLK3, AURKC, FLT3, ABL1, JAK2, PLK3
ABL 약물에 대한 반응성 바이오 마커
Drug_Class Gene_exp 바이오마커 ( 발현조절변이세트 )
abl Gene_EXP:ABHD3 17_68269074_G_C
abl Gene_EXP:ACSF2 2_71393433_A_G,2_71424561_G_GT,2_71428456_T_A,2_71433365_T_TC
abl Gene_EXP:ACVR1B 2_113934259_C_T,5_181155466_T_G,10_79312556_A_G,11_12162199_T_G,12_6818898_A_C
abl Gene_EXP:ADAR 1_152312661_G_T,2_55588861_T_C,3_56753664_A_G,22_41781812_C_A
abl Gene_EXP:ADAT2 5_141490949_A_G,17_41827392_A_C
abl Gene_EXP:ALDH5A1 2_100470432_G_A,2_100470504_C_T,2_100470642_C_T,2_178612907_A_C
abl Gene_EXP:ARL17B 7_87391707_G_C
abl Gene_EXP:ARRB1 16_46710765_T_A
abl Gene_EXP:ASH2L 9_33796659_C_T,9_33796705_C_G,9_33797971_T_A,9_33797993_G_A,9_33797994_C_T
abl Gene_EXP:ATP6V0B 17_78529723_C_G
abl Gene_EXP:ATP7B 2_182063828_G_C,5_176336593_G_A,5_176347862_G_T
abl Gene_EXP:BAI3 6_30705792_T_G,13_113159942_A_G
abl Gene_EXP:BDKRB1 22_22643666_C_G
abl Gene_EXP:BLCAP 4_48609132_A_G
abl Gene_EXP:C15orf26 17_999610_T_C
abl Gene_EXP:C1R 13_113159942_A_G
abl Gene_EXP:CAMK2D 2_100964113_G_A,2_100977729_C_T,11_45181661_C_T
abl Gene_EXP:CASP1 12_40313960_G_T
abl Gene_EXP:CAV1 10_133626829_C_T
abl Gene_EXP:CCRL2 15_82477660_C_A
abl Gene_EXP:CD97 4_8036186_A_G,5_141193109_A_G,7_108514148_A_C,12_108517007_T_G,17_80137479_A_T
abl Gene_EXP:CEP57L1 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T,9_33798019_A_G
abl Gene_EXP:CHGB 15_67236036_T_G
abl Gene_EXP:CMBL 11_117203393_G_A
abl Gene_EXP:CRADD 8_123427934_A_G,8_123429947_A_G,8_123436496_A_G,8_123436564_T_A,8_123437226_C_T
abl Gene_EXP:CRB3 15_98922244_C_T
abl Gene_EXP:CST3 5_181155466_T_G,10_11921140_T_G
abl Gene_EXP:CUX2 22_21127217_C_G
abl Gene_EXP:CXXC1 2_119254595_G_A,3_112199369_A_G
abl Gene_EXP:CYTH3 2_66439901_A_C
abl Gene_EXP:DBH 13_113159942_A_G
abl Gene_EXP:DCBLD1 10_26746549_C_T,11_12162199_T_G
abl Gene_EXP:DGAT1 3_38905381_A_T,3_38910262_T_C,11_18484005_G_A
abl Gene_EXP:DLC1 2_182063828_G_C,20_56366031_C_T
abl Gene_EXP:DQX1 1_113907966_C_T
abl Gene_EXP:DSTN 1_214608652_G_A,16_24750598_A_G,16_24806184_C_T
abl Gene_EXP:EDIL3 11_12162199_T_G
abl Gene_EXP:EFEMP1 1_248441636_T_G,7_149253814_T_G
abl Gene_EXP:EFHD2 1_451649_A_AG,1_213007133_T_G,2_61492168_C_A,12_51745916_T_G
abl Gene_EXP:ELOVL5 13_37746457_TAA_TA
abl Gene_EXP:ENG 3_186558604_C_T,22_29806785_G_C
abl Gene_EXP:EVPL 15_84798628_G_A
abl Gene_EXP:FAM126A 1_451649_A_AG,7_72942379_A_C
abl Gene_EXP:FAM163A 2_113934259_C_T,6_33279455_T_G,16_30953637_A_C,20_16044565_T_G
abl Gene_EXP:FHL3 11_65543121_A_C
abl Gene_EXP:FLNA 20_34750204_T_G,10_79312556_A_G,15_84241166_A_C,16_1817242_T_C,3_100302035_G_T
abl Gene_EXP:FLNA 3_118902653_C_T
abl Gene_EXP:G6PD 16_87644643_G_A
abl Gene_EXP:GAB2 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T
abl Gene_EXP:GAB2 1_451649_A_AG
abl Gene_EXP:GATA2 2_182063828_G_C
abl Gene_EXP:GBE1 8_122952205_T_G,14_93183653_A_C,5_181155466_T_G,19_47441156_T_G,19_9566733_T_G
abl Gene_EXP:GBP1 11_12162199_T_G
abl Gene_EXP:GBP1 3_55480738_A_T
abl Gene_EXP:GLUL 16_46710765_T_A
abl Gene_EXP:GMPR 2_182063828_G_C
abl Gene_EXP:GRB10 7_51028450_A_G,12_56425138_C_T
abl Gene_EXP:HLF 19_54338327_C_T
abl Gene_EXP:HNRPDL 17_55774876_T_G
abl Gene_EXP:HSPG2 1_37703244_A_C,15_84241166_A_C
abl Gene_EXP:ICA1 1_451649_A_AG
abl Gene_EXP:ICAM1 8_12358868_A_G
abl Gene_EXP:IFNAR1 16_259458_T_G,1_154331414_T_G,1_64663808_A_C,18_14183954_G_T,7_32543154_A_C
abl Gene_EXP:IL15RA 22_36566306_C_G
abl Gene_EXP:IRX5 1_13248174_T_C
abl Gene_EXP:KAT7 16_16036657_C_A
abl Gene_EXP:KDSR 22_21127217_C_G
abl Gene_EXP:KHDRBS1 19_11431113_CT_C
abl Gene_EXP:KLF15 8_7259511_T_C,10_50311228_T_G
abl Gene_EXP:KLHL23 10_79312556_A_G,13_113159942_A_G,13_113325635_A_G
abl Gene_EXP:KMO 22_21127217_C_G
abl Gene_EXP:LAPTM4B 20_56366031_C_T
abl Gene_EXP:LEPROTL1 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T,9_33798019_A_G
abl Gene_EXP:LIN28B 2_113934259_C_T,5_181155466_T_G,8_7290003_A_C
abl Gene_EXP:LPP 18_909560_A_G,14_93183653_A_C,11_73355795_A_G,1_15381304_A_C,6_31966660_T_G
abl Gene_EXP:LRP11 9_108900415_C_A
abl Gene_EXP:LSM7 13_113159942_A_G
abl Gene_EXP:MANBAL 1_24074187_A_G
abl Gene_EXP:MICALL2 7_72942379_A_C,8_7290003_A_C,11_12162199_T_G,12_51745916_T_G,16_30953637_A_C
abl Gene_EXP:MMP14 15_99729430_G_C
abl Gene_EXP:MPP1 7_114663562_CT_C,9_33796659_C_T,9_33798019_A_G
abl Gene_EXP:MTPAP 3_49714047_T_G
abl Gene_EXP:MYH9 1_15381304_A_C,9_69516199_A_C,10_11921140_T_G,13_113159942_A_G
abl Gene_EXP:MYH9 22_36566306_C_G
abl Gene_EXP:NAALADL2 1_78893077_T_G
abl Gene_EXP:NFE2 2_182063828_G_C
abl Gene_EXP:NFKBIA 10_43616797_G_A
abl Gene_EXP:NNMT 11_12162199_T_G,13_113325635_A_G
abl Gene_EXP:NUCB2 8_26370124_A_G
abl Gene_EXP:NUDC 18_24064127_G_T
abl Gene_EXP:NUDT3 11_119054629_G_A
abl Gene_EXP:NUP43 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T
abl Gene_EXP:ODF3 2_171053803_C_T,8_73319241_T_TGG,12_25069335_A_G
abl Gene_EXP:OLFML2A 17_7797836_A_C,2_154854926_A_C,15_84241166_A_C,6_30705792_T_G,7_72942379_A_C
abl Gene_EXP:OPHN1 12_54002598_T_G
abl Gene_EXP:OSMR 11_65547388_T_G
abl Gene_EXP:PABPC4L 15_75266048_A_G
abl Gene_EXP:PCDH9 6_46867169_TG_T
abl Gene_EXP:PDLIM7 16_84872374_G_C
abl Gene_EXP:PERP 6_167373419_T_C,8_100924055_G_A
abl Gene_EXP:PHYHIPL 13_113159942_A_G,16_30953637_A_C
abl Gene_EXP:PLD2 15_84407910_G_A
abl Gene_EXP:PLEC 7_72942379_A_C,10_11921140_T_G,10_79312556_A_G,12_51745916_T_G
abl Gene_EXP:PLOD1 2_113934259_C_T
abl Gene_EXP:PLS3 19_4911043_A_C
abl Gene_EXP:POU2F3 16_10969154_C_T
abl Gene_EXP:PPAP2A 5_133233474_T_G,12_57244313_A_C
abl Gene_EXP:PPIP5K2 2_178769706_G_T,11_129905704_C_T
abl Gene_EXP:PPP6R1 17_43829748_T_G
abl Gene_EXP:PREX1 9_34371054_A_C
abl Gene_EXP:PRKCQ 9_33796659_C_T,9_33796705_C_G,9_33798019_A_G
abl Gene_EXP:PRSS23 10_11921140_T_G,13_113325635_A_G
abl Gene_EXP:PRSS57 9_33796659_C_T
abl Gene_EXP:PSMB9 10_11921140_T_G,11_12162199_T_G,16_55415_T_G,X_2856636_A_C
abl Gene_EXP:PSTPIP2 2_182063828_G_C,6_143760631_C_A,6_143772215_C_T
abl Gene_EXP:PTRF 6_30705792_T_G,12_57178583_A_C,8_122952205_T_G,11_94082585_T_C,13_113159942_A_G
abl Gene_EXP:PVRL2 17_999610_T_C
abl Gene_EXP:REP15 12_121222019_A_C,2_134946094_C_T,X_130145432_T_G,3_100302035_G_T,11_73355795_A_G
abl Gene_EXP:RNF169 6_119180436_T_TAA
abl Gene_EXP:RUNDC3A 10_11921140_T_G,13_113159942_A_G
abl Gene_EXP:RUNX1 9_33796659_C_T,9_33796705_C_G
abl Gene_EXP:RUNX1 1_78629896_T_C,2_108507561_T_G,8_7290003_A_C,10_11921140_T_G
abl Gene_EXP:RXRA 15_30087620_G_A,15_32400109_G_A
abl Gene_EXP:SEMA4D 11_125626705_T_G
abl Gene_EXP:SEMA4G 6_146733274_T_TA
abl Gene_EXP:SERPINE2 7_72942379_A_C
abl Gene_EXP:SHF 2_108507561_T_G,7_149432379_A_C
abl Gene_EXP:SLC25A37 2_182063828_G_C
abl Gene_EXP:SNAP25 2_71424561_G_GT
abl Gene_EXP:SOGA2 3_51980957_A_C
abl Gene_EXP:ST18 10_133626012_T_A,10_133626013_G_A
abl Gene_EXP:SYP 13_113159942_A_G,16_1817242_T_C
abl Gene_EXP:TAPBP 11_12162199_T_G,12_40313960_G_T,16_30953637_A_C
abl Gene_EXP:TCEB3 14_67333008_A_G
abl Gene_EXP:TEAD3 18_166710_TTAAAA_T,18_166819_T_C,18_264012_G_A
abl Gene_EXP:THBS1 2_60761746_T_G,8_7290003_A_C,10_50311228_T_G,11_12162199_T_G,19_4911043_A_C
abl Gene_EXP:THBS1 15_65447029_G_A
abl Gene_EXP:TIGD1 1_150261398_T_G,17_55774876_T_G
abl Gene_EXP:TMEM63A 6_73622013_G_C,6_73635330_C_T,11_65547388_T_G
abl Gene_EXP:TMEM92 8_1565648_A_G,9_61104415_C_T
abl Gene_EXP:TNFRSF21 20_8802237_G_A
abl Gene_EXP:TRAM2 1_26457907_T_G,22_21127217_C_G
abl Gene_EXP:TRAM2 11_12162199_T_G,12_40313960_G_T,13_113159942_A_G
abl Gene_EXP:TRIM29 12_94248247_C_T,15_50747694_T_C
abl Gene_EXP:TRIP10 14_20381224_T_G
abl Gene_EXP:TSC22D3 3_101857033_AT_A
abl Gene_EXP:TSPAN4 11_12162199_T_G
abl Gene_EXP:TXNL4A 11_124397016_A_G
abl Gene_EXP:UBE2Q1 1_228279161_C_T,1_228303932_G_A,3_56753664_A_G
abl Gene_EXP:VCL 10_97936313_A_C
abl Gene_EXP:WDR1 12_122976696_T_G
abl Gene_EXP:WFDC2 2_97152499_A_C,2_97152524_G_T,2_97152525_C_G,2_97152527_G_T,2_97152546_G_C
abl Gene_EXP:WT1 9_33796659_C_T,9_33796705_C_G,9_33798019_A_G
abl Gene_EXP:WWC3 19_4911043_A_C,17_7797836_A_C,19_15113629_A_C,16_70661204_T_G,14_93183653_A_C
abl Gene_EXP:YES1 1_16580833_G_T
abl Gene_EXP:ZNF302 17_36013794_G_A
abl Gene_EXP:ZNF397 1_26457907_T_G,15_56693096_A_C,22_21127217_C_G,22_22643666_C_G
abl Gene_EXP:ZNF423 11_65501241_T_G
[표 15]에 제시된 FRH 들의 해당 유전자(gene) 발현과의 상관도(P-value) 및 약물과의 상관도(P-value)를 산출한 결과가 아래 [표 16]에 정리되어있다.
또한, [표 15]에 제시된 FRH들이 포함되어 발현된 유전자들 중 주요 유전자와 각각의 ABL 약물과의 상관도(P-value)를 산출한 결과가 도 31에 도시되어 있다.
이들 [표 16] 및 [도 31]로부터 [표 16]의 두가지 상관도(P-value)가 공통적으로 낮은 유전자(gene)에 포함된 FRH(s)가 ABL 약물 반응성을 판단하기 위한 바이오마커로 실효성이 높은 것으로 판단할 수 있다.
DrugPathway GENE Variants Var _Drug( pval ) Var _ Exp ( Pval )
abl MEI1_1 chr22_41743050_G_A 4.85E-06 0.048265101
abl MYO1E_1 chr15_59223315_G_A 9.45E-06 0.007356789
abl HSPG2_1 chr1_21855190_T_G 3.11E-05 0.047030976
abl DUS1L_1 chr17_82060026_C_T 3.91E-05 0.03583129
abl ANXA2_1 chr15_60382524_A_G 5.75E-05 0.01380595
abl CDA_1 chr1_20613970_T_C 0.000123749 0.01233326
abl R3HDM1_1 chr2_135621624_GT_G 0.000150326 0.007933574
abl HMGB1_1 chr13_30465849_T_C 0.000160907 1.54E-07
abl TRIM35_1 chr8_27311444_G_A 0.000300142 0.010188344
abl NMT2_1 chr10_15119275_A_C 0.000338877 0.015194231
abl WWC1_1 chr5_168453939_T_G 0.000400908 0.007809824
abl EPB41_1 chr1_28987461_G_A 0.000407874 0.032052572
abl TGS1_1 chr8_55790504_CT_C 0.000507403 0.000527822
abl CLIP4_1 chr2_29189528_C_T 0.000680402 0.012550596
abl PPFIBP1_1 chr12_27671307_G_A 0.000932648 0.043451196
abl GNG12_1 chr1_67707581_C_T 0.000988807 0.022170841
abl MATN3_1 chr2_20002159_T_TACAC 0.000997596 0.02071966
abl LAMA5_1 chr20_62325178_T_C 0.001153135 0.010970602
abl SECISBP2_1 chr9_89319872_A_G 0.001203729 0.020014055
abl CARD10_1 chr22_37506170_T_C 0.001543214 0.032625328
abl CELF3_1 chr1_151714507_T_A 0.001901287 0.026406472
abl RPRD2_1 chr1_150470594_A_C 0.002054115 0.049994398
abl LONP1_1 chr19_5707040_C_G 0.002145064 0.014919269
abl CELSR1_1 chr22_46397746_T_G 0.002174791 0.029193759
abl AVPI1_1 chr10_97677649_A_G 0.002288252 0.001581419
abl HEATR5A_1 chr14_31321626_G_C 0.002664426 0.037377577
abl ABCC3_1 chr17_50687493_T_G 0.002687235 0.008875192
abl BCL9L_1 chr11_118897861_A_C 0.003330363 0.034238861
abl ATP9A_1 chr20_51712877_T_C 0.003711948 0.007942465
abl PPL_1 chr16_4899248_T_G 0.003916476 0.036032874
abl WTIP_1 chr19_34482571_G_A 0.004231715 0.04930162
abl SEC11C_1 chr18_59152698_T_C 0.004414812 0.00225746
abl RIN2_1 chr20_19990244_G_A 0.004460992 0.013004393
abl VPS13C_1 chr15_61910091_C_T 0.004506626 0.031208891
abl WAS_1 chrX_48691219_A_C 0.004569497 0.02612273
abl ITGA2_1 chr5_53062931_TA_T 0.005690843 0.016066848
abl SNX6_1 chr14_34581380_G_T 0.006210652 0.003379828
abl ITGB5_1 chr3_124769064_T_G 0.006500498 0.000658854
abl KIF13A_1 chr6_17796543_CTT_C 0.006766834 0.022643788
abl HNRNPD_1 chr4_82373387_A_G 0.006955259 0.035424294
abl PDE7A_1 chr8_65724444_TATAA_T 0.006982791 0.049491005
abl TAB1_1 chr22_39417620_CA_C 0.007324331 0.041922448
abl TSPAN17_1 chr5_176657159_A_G 0.009147394 0.031164715
abl MYO1C_1 chr17_1484178_C_T 0.009858187 0.007802374
abl CDC42BPA_1 chr1_227318293_C_CG 0.010493359 0.000358115
abl ACTN4_1 chr19_38728028_T_G 0.011156467 0.005408687
abl MET_1 chr7_116757685_T_G 0.012677621 5.06E-05
abl GPC1_1 chr2_240451010_T_G 0.013814172 0.00346274
abl HERC1_1 chr15_63725445_C_A 0.014048274 0.007901005
abl RAB13_1 chr1_153982198_T_C 0.015384036 0.007436568
abl UBE2N_1 chr12_93411182_C_T 0.015885474 1.51E-06
abl STRBP_1 chr9_123266116_C_G 0.017136074 0.001078377
abl EZH1_1 chr17_42729015_C_CA 0.018478925 0.00312166
abl RNASEH2B_1 chr13_50956394_G_T 0.01852788 0.005925233
abl LTBP3_1 chr11_65547976_T_G 0.019306265 0.001002058
abl EGFR_1 chr7_55205662_A_C 0.020078083 0.000779757
abl LPIN3_1 chr20_41358465_C_G 0.020089538 6.89E-05
abl PHF21A_1 chr11_46079428_CT_C 0.020895851 0.00265565
abl SPR_1 chr2_72891611_A_C 0.021434042 0.000101783
abl RCHY1_1 chr4_75509142_T_A 0.022232183 7.00E-06
abl EPHA2_1 chr1_16148437_A_C 0.023495387 0.003022958
abl GMEB1_1 chr1_28690201_G_T 0.025608914 0.005247117
abl KRI1_1 chr19_10565667_A_T 0.026306225 2.71E-07
abl MADD_1 chr11_47325027_T_C 0.027877784 0.001497343
abl ITGAV_1 chr2_186622542_G_T 0.027935094 0.000708467
abl FN1_1 chr2_215384980_GA_G 0.028277863 0.006411138
abl ITGB8_1 chr7_20404676_A_G 0.03058173 0.00229404
abl MYOF_1 chr10_93341723_C_T 0.031403296 1.02E-05
abl MICALL1_1 chr22_37911902_T_C 0.031573614 0.005136303
abl TXNL4A_1 chr18_80033872_T_C 0.035325542 0.000843174
abl AHR_1 chr7_17339074_A_C 0.036910472 0.009928124
abl HCFC1_1 chrX_153963207_T_G 0.040430125 0.001579155
abl TJP1_1 chr15_29761137_A_C 0.040841908 0.005695684
abl DPF1_1 chr19_38216453_A_C 0.041618699 0.002769532
abl TUFT1_1 chr1_151565936_G_A 0.042197322 0.004559558
abl CNN3_1 chr1_94903018_TA_T 0.044343955 0.002044509
abl CALD1_1 chr7_134891710_CTT_C 0.044361406 0.006749784
abl DCP1A_1 chr3_53342054_G_C 0.044944752 0.003471409
abl CNBP_1 chr3_129183756_G_T 0.045255004 0.001660507
abl CDC42BPB_1 chr14_102952453_T_G 0.046084899 0.003315245
abl ZNF557_2 chr19_7083618_A_G,chr19_7083750_A_G 0.00011707290070365984,
6.389914683218769e-05
1.6329734686551152e-07,4.640996358288638e-07
abl TSC22D1_2 chr13_44574373_G_T,chr13_44436480_G_A 0.00011795878001107085,0.0037018440403040202 0.0064804726533923464,0.03180017409101453
abl KDM2B_2 chr12_121579943_C_CA,chr12_121444386_T_G 0.0001937979358872413,0.00792596940180308 0.01794421156168876,0.019501973878425127
abl TMEM206_3 chr1_212365230_C_T,chr1_212377513_G_A,chr1_212377773_C_T 0.00020121681284993422,0.0003349904631200686,5.8829810838971604e-05 0.015527989364148976,0.03220676605475732,0.012309846725869236
abl CNOT10_2 chr3_32727933_TAA_T,chr3_32704796_GT_G 0.0004336510041481753,0.008993061026214434 0.009535253937430231,0.00725632017358903
abl AHNAK2_6 chr14_104939818_T_C,chr14_104947943_T_G,chr14_104955559_A_C,chr14_104949306_T_C,chr14_104950989_T_C,chr14_104944923_A_G 0.0013733032135289033,9.993054536650758e-05,0.0009826292819827367,0.008303598761450906,0.009151781473220755,0.016815570915054142 0.0009255099251631373,0.014057846162243957,0.00506490504122054,0.005256944789299486,0.039201386575838416,0.004782218518041667
abl HNRNPH1_2 chr5_179614784_GAAAAA_G,chr5_179616992_TA_T 0.0015622332101704927,0.013101283499781437 0.009729395921872941,0.006282233288170697
abl KCTD11_2 chr17_7355768_G_A,chr17_7353417_T_G 0.0021551269324258863,0.011987917410278012 0.042125567363077016,0.0012683162409826913
abl DCBLD2_2 chr3_98800637_G_A,chr3_98822022_G_A 0.002171037536345973,0.000251692831370466 0.02405283820151249,0.02321925017861924
abl MICALL2_6 chr7_1434706_A_T,chr7_1436884_C_A,chr7_1436960_A_G,chr7_1434574_G_A,chr7_1438692_G_A,chr7_1438940_G_A 0.0035785281207345704,0.005806506395454868,0.0023336782590812483,0.003953693182824404,0.01322256820373324,0.01322256820373324 0.03116600791585888,0.020144032243767682,0.0387968938865376,0.018579241850634483,0.001706040259270731,0.001706040259270731
abl YEATS4_3 chr12_69360050_G_A,chr12_69360067_T_C,chr12_69359732_G_C 0.004863813186856697,0.017375818716536366,0.03137776422130159 0.00020734016607029562,9.576513142549652e-05,0.00015854860163792644
abl FAM129B_2 chr9_127505498_C_G,chr9_127507507_A_G 0.0058285941972244645,0.02690463941303876 0.011307547073529664,0.009068416405751362
abl DAZAP1_2 chr19_1432575_T_C,chr19_1434836_G_C 0.007270894232908141,0.04710249822900437 0.008783799588482919,0.0025498805972486143
abl TRIO_2 chr5_14390880_CT_C,chr5_14489165_TA_T 0.008880626014071066,0.01650056581622358 7.026077789590974e-05,0.0025442006562780626
abl LTBR_2 chr12_6385217_T_C,chr12_6385074_A_G 0.009079148191429435,0.006460458599235777 9.805545850814532e-05,0.044833733345219534
abl CRIM1_2 chr2_36479368_G_C,chr2_36441370_A_C 0.009119609813496462,0.019906184227680684 0.012444715286562538,0.003648330338783967
abl LRRC1_2 chr6_53795560_C_T,chr6_53922469_G_C 0.01198676814286411,0.0006843529222630762 0.000908035692517222,0.04843244804719673
abl PLEC_3 chr8_143935900_T_G,chr8_143916360_A_G,chr8_143919099_A_G 0.014640529544546175,0.009983558087568838,0.034402276881097434 0.0004960012901022363,0.00910116635228719,0.0010288222361061275
abl CCAR1_4 chr10_68737725_A_G,chr10_68749117_T_C,chr10_68786466_C_T,chr10_68747145_CT_C 0.01483460962771855,0.019812419206917474,0.021724978822350548,0.012199365670034771 0.007861846127742463,0.007748422295395019,0.009002153564015953,0.007417608363424872
abl PBRM1_10 chr3_52550415_T_TCTC,chr3_52550699_A_G,chr3_52576635_T_A,chr3_52603470_C_G,chr3_52609291_A_G,chr3_52658108_G_A,chr3_52658343_C_G,chr3_52642048_AC_A,chr3_52642050_A_T,chr3_52658412_CTT_C 0.015475400089384512,0.0016628718776702444,0.035404535122126136,0.013312042665148668,0.0242839606361519,0.02159841119723304,0.03729870903666122,0.025323429673084204,0.025323429673084204,0.0001941847064581337 0.0035430700286634563,0.0001926448792301472,0.007441673662340349,0.002758979013645352,0.0010612844220239503,0.004958532862731571,0.004683945580784586,0.00010786476378721626,0.00010786476378721626,0.04797045127180218
abl EPAS1_2 chr2_46356096_C_A,chr2_46375583_T_C 0.01783131944184612,0.0010999393665466503 0.008349664569290316,0.024779624499683697
abl MYL12B_2 chr18_3277079_C_A,chr18_3261766_G_T 0.02040887855273308,0.006963645724708455 0.0006636499143577351,0.002628020597022407
abl ASPH_3 chr8_61578734_T_G,chr8_61642872_G_A,chr8_61638365_TA_T 0.02703041744922913,0.04217140046834995,0.0037026849241301204 0.00027481062695969863,9.242250914202104e-05,0.0033421074285719613
abl CTTN_2 chr11_70433765_G_C,chr11_70433037_T_G 0.028796315723836858,0.0215077683383786 0.008528354106314544,0.004388396641544275
abl GBP3_2 chr1_89009135_A_G,chr1_89013185_G_A 0.03712796271516626,0.046403726190448136 2.531316619591342e-10,0.003766535351837685
abl RBM6_3 chr3_50077082_C_T,chr3_50066484_G_A,chr3_50075273_C_A 0.03754138190716002,0.009406589543431777,0.006286329345703225 4.469564601606787e-06,0.014325869585835831,0.04790544676634136
abl GULP1_2 chr2_188589974_C_CT,chr2_188569425_C_A 0.04155742757047321,0.00797269939608827 0.004507263398919969,0.006203700518672077
abl RAI14_2 chr5_34822821_T_C,chr5_34795871_A_G 6.659980942617595e-05,0.005987810799744655 0.002995737088482826,0.006423617908157835
chromatin 약물에 대한 반응성 바이오 마커
Drug_Class Gene_exp 바이오마커 ( 발현조절변이세트 )
chromatin Gene_EXP:ABHD12 2_190469793_G_C
chromatin Gene_EXP:ABHD6 12_52771095_C_G,1_26457907_T_G,5_141432375_A_C,2_119366546_A_G,22_18847351_G_C
chromatin Gene_EXP:ABI3BP 16_87644643_G_A
chromatin Gene_EXP:ACVR1B 1_26457907_T_G
chromatin Gene_EXP:ACVR1B 2_113934259_C_T,5_181155466_T_G,10_79312556_A_G,11_12162199_T_G,12_6818898_A_C
chromatin Gene_EXP:ACVR1B 2_68528704_T_C
chromatin Gene_EXP:ACVR2B 3_128945112_G_A,13_113159942_A_G,11_34452090_T_G,16_1817242_T_C,11_65547388_T_G
chromatin Gene_EXP:ADAM10 17_63963708_T_C
chromatin Gene_EXP:AFMID 14_70800628_C_T,17_80090022_T_G,3_119147558_G_A,12_6941768_C_A,3_196782572_G_T
chromatin Gene_EXP:AKAP1 16_72119226_C_G
chromatin Gene_EXP:ALKBH2 19_3281403_A_C,16_30953637_A_C,8_27431326_A_G,10_73803641_A_G,11_12162199_T_G
chromatin Gene_EXP:AMD1 10_133625692_C_T,19_41116300_T_C
chromatin Gene_EXP:ANKIB1 2_218827668_A_C
chromatin Gene_EXP:ANXA1 13_113159942_A_G,16_1817242_T_C,10_11921140_T_G,2_113934259_C_T,12_51745916_T_G
chromatin Gene_EXP:ANXA4 6_33799054_A_G,8_27431326_A_G,8_30756677_T_G,19_11402175_A_C
chromatin Gene_EXP:ANXA5 5_181155466_T_G,9_69516199_A_C,12_51745916_T_G,13_113325635_A_G
chromatin Gene_EXP:APEX1 17_55774876_T_G
chromatin Gene_EXP:ARHGAP19 14_55169342_TAAA_T
chromatin Gene_EXP:ARID2 11_12162199_T_G,16_72119226_C_G,16_72129067_G_T,16_72164743_G_A
chromatin Gene_EXP:ARL1 6_25488355_C_T,6_25510468_CAT_C,9_93293047_T_G,12_51745916_T_G,13_113159942_A_G
chromatin Gene_EXP:ASB13 17_28613683_A_C
chromatin Gene_EXP:ASCL1 7_72942379_A_C
chromatin Gene_EXP:ATG4A 2_61492168_C_A,2_113934259_C_T,9_35398502_T_G,9_108900415_C_A,16_87644643_G_A
chromatin Gene_EXP:ATIC 7_34811781_C_G,12_40313960_G_T
chromatin Gene_EXP:ATP11C 1_26457907_T_G
chromatin Gene_EXP:ATP5B 1_54243266_A_G,6_31966660_T_G
chromatin Gene_EXP:ATP6V1A 9_69516199_A_C
chromatin Gene_EXP:ATXN7L3B 15_65451964_A_G,2_108507561_T_G,2_113934259_C_T,12_57062993_T_G,5_181155466_T_G
chromatin Gene_EXP:BAZ1A 15_65451964_A_G
chromatin Gene_EXP:BCCIP 1_219979389_T_A,19_11402175_A_C
chromatin Gene_EXP:BCL11B 1_26457907_T_G,5_141432375_A_C,22_22643666_C_G
chromatin Gene_EXP:BCL7A 10_11921140_T_G,11_12162199_T_G,13_113159942_A_G
chromatin Gene_EXP:BEND3 15_75524142_T_C,15_75876091_T_G
chromatin Gene_EXP:BEND4 6_37022626_A_C,1_150261398_T_G,2_237368621_T_G,5_181155466_T_G,12_6818898_A_C
chromatin Gene_EXP:BHLHE40 11_12162199_T_G,8_122952205_T_G,6_30705792_T_G,14_93183653_A_C,8_7290003_A_C
chromatin Gene_EXP:BLVRB 15_20566681_C_G
chromatin Gene_EXP:BMP1 7_72942379_A_C,11_12162199_T_G,17_7797836_A_C
chromatin Gene_EXP:BMS1 1_114405659_A_G
chromatin Gene_EXP:BPTF 17_55774876_T_G
chromatin Gene_EXP:C12orf10 10_73803641_A_G
chromatin Gene_EXP:C12orf23 16_72119226_C_G
chromatin Gene_EXP:C12orf29 4_173528913_A_G,10_79312556_A_G,12_40313960_G_T,15_65451964_A_G
chromatin Gene_EXP:C12orf45 9_127910024_A_C
chromatin Gene_EXP:C14orf93 20_42084724_T_C
chromatin Gene_EXP:C16orf59 19_9566733_T_G
chromatin Gene_EXP:C17orf80 16_72119226_C_G,16_72129067_G_T
chromatin Gene_EXP:C2orf44 7_108023984_G_A,7_108024001_C_T,11_65547388_T_G,14_55169342_TAAA_T
chromatin Gene_EXP:C6orf1 4_74038466_A_C
chromatin Gene_EXP:C8orf34 1_17244272_C_G,1_17265626_T_C
chromatin Gene_EXP:CACNA2D2 15_67236036_T_G
chromatin Gene_EXP:CAMKV 3_128945112_G_A,13_113159942_A_G,16_1817242_T_C,20_42084724_T_C
chromatin Gene_EXP:CASKIN1 10_11921140_T_G
chromatin Gene_EXP:CAV1 12_51745916_T_G,13_39724512_C_T,17_81086334_C_G
chromatin Gene_EXP:CBR3 3_128945112_G_A,8_7290003_A_C,8_30756677_T_G,22_22098988_G_T,12_6818898_A_C
chromatin Gene_EXP:CBX2 17_80352778_T_G,7_72942379_A_C,10_73803641_A_G
chromatin Gene_EXP:CCDC107 11_1242476_T_G,20_62661184_C_T,17_19414393_T_G,4_74038466_A_C,16_259458_T_G
chromatin Gene_EXP:CCDC138 8_30756677_T_G,12_40313960_G_T,15_75524142_T_C
chromatin Gene_EXP:CCDC43 8_7290003_A_C
chromatin Gene_EXP:CCDC77 7_108023984_G_A
chromatin Gene_EXP:CCNB1IP1 17_55774876_T_G
chromatin Gene_EXP:CCNT1 1_197912561_T_G,5_115984518_A_T,8_98032165_T_G,15_65451964_A_G
chromatin Gene_EXP:CCT2 12_40313960_G_T
chromatin Gene_EXP:CCT3 1_16589114_C_T,1_146969331_G_A
chromatin Gene_EXP:CCT4 7_108023984_G_A
chromatin Gene_EXP:CCT7 12_40313960_G_T
chromatin Gene_EXP:CCT8 7_108023984_G_A,7_108024001_C_T,8_61583890_T_A
chromatin Gene_EXP:CD151 6_158785582_A_C,1_54243266_A_G,11_12162199_T_G,1_234373536_T_G,15_84241166_A_C
chromatin Gene_EXP:CD44 2_113934259_C_T,12_40313960_G_T,12_51745916_T_G,15_75524142_T_C
chromatin Gene_EXP:CD63 5_181155466_T_G
chromatin Gene_EXP:CD99L2 9_108900415_C_A,16_21550183_G_T,17_7797836_A_C,1_54243266_A_G,X_129751754_A_C
chromatin Gene_EXP:CEBPD 6_150926303_A_G
chromatin Gene_EXP:CECR5 5_181155466_T_G
chromatin Gene_EXP:CENPV 5_181155466_T_G
chromatin Gene_EXP:CEP95 11_12162199_T_G,17_55774876_T_G
chromatin Gene_EXP:CERCAM 6_30705792_T_G
chromatin Gene_EXP:CFLAR 3_128945112_G_A,17_55774876_T_G,7_108023984_G_A,16_67878678_T_G,20_42084724_T_C
chromatin Gene_EXP:CHD4 12_51745916_T_G
chromatin Gene_EXP:CHD7 11_65547388_T_G,12_40313960_G_T
chromatin Gene_EXP:CHMP4B 16_66912991_CGT_C
chromatin Gene_EXP:CIAPIN1 12_109800676_G_A
chromatin Gene_EXP:CIB1 1_149852603_A_G,1_150261398_T_G,13_113159942_A_G,16_1817242_T_C
chromatin Gene_EXP:CLOCK 4_17664674_G_A,6_83940275_G_T,12_10433951_G_C
chromatin Gene_EXP:CMPK1 16_18379704_T_G
chromatin Gene_EXP:CNOT6 1_16589114_C_T,15_75524142_T_C
chromatin Gene_EXP:COPB2 19_16503339_T_G
chromatin Gene_EXP:COPS7B 1_150261398_T_G,10_11921140_T_G,10_97048952_T_G,19_3281403_A_C
chromatin Gene_EXP:COQ10B 1_149852603_A_G,13_113159942_A_G
chromatin Gene_EXP:CRAT 6_30705792_T_G,17_55774876_T_G
chromatin Gene_EXP:CREB3 1_54243266_A_G,5_181155466_T_G,11_12162199_T_G,12_6818898_A_C,7_72942379_A_C
chromatin Gene_EXP:CRIM1 1_20724406_A_C,12_40313960_G_T,17_44212322_A_G
chromatin Gene_EXP:CRMP1 1_26457907_T_G,22_21127217_C_G
chromatin Gene_EXP:CTCF 17_81086334_C_G
chromatin Gene_EXP:CTGF 2_188994726_T_G,13_113159942_A_G
chromatin Gene_EXP:CTSA 5_181155466_T_G,11_12162199_T_G,16_87644643_G_A
chromatin Gene_EXP:CTSB 2_27774175_G_T,5_38950065_A_T,5_181155466_T_G,7_72942379_A_C,16_87644643_G_A
chromatin Gene_EXP:CYP2J2 1_26457907_T_G,5_141432375_A_C,15_42142087_A_C
chromatin Gene_EXP:CYTH1 1_112520503_A_G
chromatin Gene_EXP:DAP 12_51745916_T_G
chromatin Gene_EXP:DAZAP1 6_73622013_G_C,6_73635330_C_T
chromatin Gene_EXP:DDX1 1_158845552_TTTTAAG_T,2_131238127_C_T,2_237763246_G_A,16_69977378_CCT_C
chromatin Gene_EXP:DDX20 8_30756677_T_G
chromatin Gene_EXP:DDX25 2_61492168_C_A,5_181155466_T_G,7_72942379_A_C,11_43920052_A_C,12_40313960_G_T
chromatin Gene_EXP:DLG2 8_30756677_T_G
chromatin Gene_EXP:DLL3 13_113159942_A_G
chromatin Gene_EXP:DNMT3A 2_113934259_C_T,7_72942379_A_C,11_12162199_T_G
chromatin Gene_EXP:DPH5 8_12430448_C_T
chromatin Gene_EXP:DSEL 9_113323143_G_A,19_36449796_A_G
chromatin Gene_EXP:DUSP12 15_75524142_T_C
chromatin Gene_EXP:DYNLT3 16_70661204_T_G
chromatin Gene_EXP:E2F5 19_16896123_T_G
chromatin Gene_EXP:ECSIT 2_60761746_T_G,2_105307612_A_C,11_43920052_A_C,12_6818898_A_C,19_4911043_A_C
chromatin Gene_EXP:EFEMP2 11_65547388_T_G
chromatin Gene_EXP:EFHD2 1_451649_A_AG,1_213007133_T_G,2_61492168_C_A,12_51745916_T_G
chromatin Gene_EXP:EIF3J 1_237687398_C_T,17_36429365_A_G
chromatin Gene_EXP:EIF3L 17_51169925_C_T,20_42084724_T_C
chromatin Gene_EXP:EIF3M 5_112146040_A_T
chromatin Gene_EXP:ELL2 5_181155466_T_G,10_73803531_T_C
chromatin Gene_EXP:ENDOD1 5_80744593_A_C
chromatin Gene_EXP:ESYT2 10_73803641_A_G,19_4911043_A_C
chromatin Gene_EXP:EWSR1 20_42084724_T_C
chromatin Gene_EXP:EWSR1 11_75399545_A_G,11_75402507_AT_A,11_75422721_G_A,12_11030443_C_G,22_24879556_C_A
chromatin Gene_EXP:EXOSC4 3_61748865_T_C,17_21416455_C_G
chromatin Gene_EXP:EXOSC5 7_108023984_G_A
chromatin Gene_EXP:F8 1_175323536_A_T
chromatin Gene_EXP:FAM111A 13_113159942_A_G,2_108507561_T_G,16_1817242_T_C,10_11921140_T_G,8_7290003_A_C
chromatin Gene_EXP:FAM114A1 3_191357867_G_A,12_51745916_T_G
chromatin Gene_EXP:FAM117B 13_113159942_A_G,7_108023984_G_A,17_55774876_T_G,11_65547388_T_G,16_1817242_T_C
chromatin Gene_EXP:FAM126A 1_451649_A_AG,7_72942379_A_C
chromatin Gene_EXP:FAM174A 1_198735165_C_T
chromatin Gene_EXP:FAM214B 20_24959779_A_C
chromatin Gene_EXP:FAP 1_183963850_T_G,11_94082585_T_C,17_55774876_T_G
chromatin Gene_EXP:FASN 2_128268771_A_G
chromatin Gene_EXP:FKBP4 13_113325635_A_G
chromatin Gene_EXP:FUBP1 16_28169801_A_C
chromatin Gene_EXP:FUCA1 1_153341603_A_C,11_12162199_T_G
chromatin Gene_EXP:FUCA2 1_26457907_T_G,5_141432375_A_C,22_18847351_G_C,1_219210601_T_G,22_22643666_C_G
chromatin Gene_EXP:FUCA2 5_141432375_A_C,1_26457907_T_G,22_18847351_G_C,1_219210601_T_G,22_22643666_C_G
chromatin Gene_EXP:FUZ 10_73803641_A_G,17_6118065_A_G
chromatin Gene_EXP:FZD3 1_26457907_T_G
chromatin Gene_EXP:GAD1 9_128640817_A_G
chromatin Gene_EXP:GADD45B 11_12162199_T_G,12_51745916_T_G
chromatin Gene_EXP:GAL 2_66439901_A_C,9_37887606_C_T
chromatin Gene_EXP:GALNTL5 10_100352318_A_G,15_34255437_A_T
chromatin Gene_EXP:GBE1 19_47441156_T_G,10_11921140_T_G,16_58525116_G_T,5_181155466_T_G,19_9566733_T_G
chromatin Gene_EXP:GBP3 8_7290003_A_C,12_40313960_G_T,15_75524142_T_C
chromatin Gene_EXP:GEMIN5 1_46261223_G_A,8_42401781_A_G,9_104837455_A_G,15_72662708_A_C
chromatin Gene_EXP:GINM1 4_154328181_A_C,7_72942379_A_C,10_73803641_A_G,11_12162199_T_G
chromatin Gene_EXP:GLB1L2 2_113934259_C_T,7_108023984_G_A
chromatin Gene_EXP:GLIPR1 10_11921140_T_G,19_4911043_A_C
chromatin Gene_EXP:GLIS3 2_66439901_A_C,8_7290003_A_C,8_41957277_G_C,10_50311228_T_G,11_65547388_T_G
chromatin Gene_EXP:GLTP 1_149852603_A_G,2_61492168_C_A
chromatin Gene_EXP:GLTSCR2 8_12430448_C_T
chromatin Gene_EXP:GNAI2 1_149852603_A_G,1_150261398_T_G,17_55774876_T_G,17_77213881_T_G,5_181155466_T_G
chromatin Gene_EXP:GNS 11_1163029_C_G
chromatin Gene_EXP:GPANK1 1_152110682_A_C
chromatin Gene_EXP:GPC1 1_54243266_A_G,10_74988957_T_G,17_7797836_A_C,7_75364819_A_C,3_113344632_A_C
chromatin Gene_EXP:GPS1 1_111982463_G_A
chromatin Gene_EXP:GRPEL2 5_133233474_T_G,9_108900415_C_A,10_11921140_T_G
chromatin Gene_EXP:GSN 5_181155466_T_G,10_11921140_T_G,13_113159942_A_G,15_75524142_T_C,16_1817242_T_C
chromatin Gene_EXP:GTF3C2 7_128839939_T_G,7_159142364_T_G
chromatin Gene_EXP:GTPBP4 12_40313960_G_T
chromatin Gene_EXP:GUF1 1_213007133_T_G,5_181155466_T_G,11_12162199_T_G,11_65547388_T_G,17_55774876_T_G
chromatin Gene_EXP:H3F3B 13_113325635_A_G
chromatin Gene_EXP:HBQ1 8_7290003_A_C
chromatin Gene_EXP:HDAC2 14_55169342_TAAA_T,17_55774876_T_G,11_65547388_T_G,7_108023984_G_A,15_75524142_T_C
chromatin Gene_EXP:HEXB 11_12162199_T_G,11_65547388_T_G,15_75876091_T_G
chromatin Gene_EXP:HIC2 2_27774175_G_T,10_11921140_T_G,13_113325635_A_G,8_7290003_A_C,1_54243266_A_G
chromatin Gene_EXP:HIST1H3F 4_88731303_A_G,9_35398502_T_G
chromatin Gene_EXP:HIST3H2A 10_11921140_T_G,16_18379704_T_G,20_16044565_T_G
chromatin Gene_EXP:HMOX1 12_51745916_T_G
chromatin Gene_EXP:HMX1 2_240451099_C_T
chromatin Gene_EXP:HNRNPA0 16_55415_T_G,17_55774876_T_G
chromatin Gene_EXP:HNRNPA1L2 2_113934259_C_T,5_181155466_T_G,7_72942379_A_C,12_40313960_G_T,12_51745916_T_G
chromatin Gene_EXP:HNRNPC 14_55169342_TAAA_T,17_74350765_T_G,17_40348252_T_G,19_9566733_T_G,1_108718913_T_G
chromatin Gene_EXP:HNRNPU 15_65451964_A_G
chromatin Gene_EXP:HNRPDL 17_55774876_T_G
chromatin Gene_EXP:HPDL 6_41770599_T_G,8_7290003_A_C
chromatin Gene_EXP:HRH1 9_108900415_C_A
chromatin Gene_EXP:HS3ST3B1 5_141432375_A_C,15_42142087_A_C
chromatin Gene_EXP:HSPD1 17_55774876_T_G
chromatin Gene_EXP:IFNAR1 19_7740447_T_G,16_259458_T_G,1_154331414_T_G,1_64663808_A_C,15_84241166_A_C
chromatin Gene_EXP:IGSF9 16_87644643_G_A,13_113325635_A_G,8_7290003_A_C,2_113934259_C_T,5_181155466_T_G
chromatin Gene_EXP:IL11RA 10_11921140_T_G
chromatin Gene_EXP:ILF3 15_65451964_A_G,2_113934259_C_T,5_181155466_T_G,7_72942379_A_C,8_7290003_A_C
chromatin Gene_EXP:INTS2 20_42084724_T_C
chromatin Gene_EXP:IPO9 12_51745916_T_G
chromatin Gene_EXP:IQGAP1 3_128945112_G_A,5_181155466_T_G,8_122952205_T_G,13_113325635_A_G,19_9566733_T_G
chromatin Gene_EXP:ISL1 7_72942379_A_C,11_12162199_T_G
chromatin Gene_EXP:ITGA3 5_181155466_T_G
chromatin Gene_EXP:ITGB5 1_234373536_T_G,2_154854926_A_C,11_65547388_T_G,17_55774876_T_G
chromatin Gene_EXP:KANK1 11_12162199_T_G
chromatin Gene_EXP:KCNH2 5_38950065_A_T
chromatin Gene_EXP:KCNN4 8_7290003_A_C,10_11921140_T_G,1_15381304_A_C,5_181155466_T_G,20_45938939_T_G
chromatin Gene_EXP:KDM1A 1_26774532_T_C,5_181155466_T_G,22_42212334_A_C
chromatin Gene_EXP:KDM3B 16_71745407_G_T,16_72119226_C_G,16_72129067_G_T,16_72164743_G_A
chromatin Gene_EXP:KHDRBS1 5_181155466_T_G,12_6818898_A_C
chromatin Gene_EXP:KHSRP 2_54968084_G_A
chromatin Gene_EXP:KIF13A 10_79312556_A_G
chromatin Gene_EXP:KIF26A 7_159142364_T_G,10_11921140_T_G
chromatin Gene_EXP:KLHL23 10_79312556_A_G,13_113159942_A_G,13_113325635_A_G
chromatin Gene_EXP:LAMB2 12_40313960_G_T,17_7797836_A_C,19_1356451_T_G
chromatin Gene_EXP:LAMP1 2_154259039_T_G,10_11921140_T_G,1_99728613_A_C,7_72942379_A_C,7_32543154_A_C
chromatin Gene_EXP:LAMP2 6_33279455_T_G
chromatin Gene_EXP:LAPTM4B 1_24669287_T_G,2_131597280_C_G,13_19425701_C_A,19_29823727_A_C,19_3913876_A_C
chromatin Gene_EXP:LDHB 4_108762737_T_G,11_65547388_T_G,17_55774876_T_G,15_40767895_T_G,15_65451964_A_G
chromatin Gene_EXP:LGALS3 1_26774532_T_C,7_72942379_A_C,9_69516199_A_C,12_40313960_G_T
chromatin Gene_EXP:LIN28B 2_113934259_C_T,5_181155466_T_G,8_7290003_A_C
chromatin Gene_EXP:LMBR1L 7_72949311_A_C,12_109266204_T_G,20_35697711_A_C
chromatin Gene_EXP:LONRF1 1_26457907_T_G,15_42142087_A_C,22_21127217_C_G,22_22643666_C_G
chromatin Gene_EXP:LRPPRC 11_12162199_T_G,12_40313960_G_T
chromatin Gene_EXP:LRRC15 1_161042141_T_G
chromatin Gene_EXP:LY96 16_21205671_A_G
chromatin Gene_EXP:LYPD1 1_129285_G_A
chromatin Gene_EXP:LYST 8_7290003_A_C,16_55415_T_G
chromatin Gene_EXP:MAK16 12_40313960_G_T
chromatin Gene_EXP:MALT1 11_12162199_T_G,19_4911043_A_C,17_63435232_G_C,17_7797836_A_C,12_40313960_G_T
chromatin Gene_EXP:MAN2B2 17_55774876_T_G
chromatin Gene_EXP:MAP2K7 1_11243090_T_G,1_16734496_C_T,12_109952676_A_C,21_46245172_A_C
chromatin Gene_EXP:MAP4 3_10819431_A_G,1_54243266_A_G,16_81270082_T_G,7_72942379_A_C,8_94407601_A_C
chromatin Gene_EXP:MBTD1 2_113934259_C_T,11_65547388_T_G,12_57062993_T_G,15_65451964_A_G,17_55774876_T_G
chromatin Gene_EXP:MCF2 15_42142087_A_C
chromatin Gene_EXP:MCM10 2_170965958_A_C
chromatin Gene_EXP:MDN1 11_65547388_T_G
chromatin Gene_EXP:MED25 17_18282776_T_G,11_74492398_A_C,1_224418353_A_C,15_43716974_A_C,X_54813054_T_G
chromatin Gene_EXP:MED28 8_7290003_A_C
chromatin Gene_EXP:METAP2 2_208237181_GA_G
chromatin Gene_EXP:MICALL2 7_72942379_A_C,8_7290003_A_C,11_12162199_T_G,12_51745916_T_G,16_30953637_A_C
chromatin Gene_EXP:MMD 1_248441636_T_G,6_30705792_T_G,8_122952205_T_G
chromatin Gene_EXP:MOSPD2 11_12162199_T_G
chromatin Gene_EXP:MOXD1 5_181155466_T_G,11_12162199_T_G
chromatin Gene_EXP:MPST 1_150261398_T_G,5_181155466_T_G,17_18353665_C_T
chromatin Gene_EXP:MR1 1_234373536_T_G,10_79312556_A_G,15_84241166_A_C,19_7740447_T_G
chromatin Gene_EXP:MRPL21 22_22098988_G_T
chromatin Gene_EXP:MRPL48 5_181155466_T_G
chromatin Gene_EXP:MRPS2 5_1798678_A_C
chromatin Gene_EXP:MRPS21 12_40313960_G_T
chromatin Gene_EXP:MRPS31 1_112520503_A_G,11_65547388_T_G
chromatin Gene_EXP:MRPS35 7_108023984_G_A,7_108024001_C_T,7_108037539_G_A
chromatin Gene_EXP:MSN 8_7290003_A_C,10_73803641_A_G
chromatin Gene_EXP:MSRA 1_110340768_A_C
chromatin Gene_EXP:MTM1 2_105307612_A_C,7_72942379_A_C
chromatin Gene_EXP:MTMR7 1_20724406_A_C
chromatin Gene_EXP:MTPAP 1_150261398_T_G,9_128964364_CT_C,11_65547388_T_G
chromatin Gene_EXP:MTUS1 19_53998273_G_A,19_53999532_G_A
chromatin Gene_EXP:MVP 11_68780792_C_A,11_68785018_G_A,12_40313960_G_T,15_75876091_T_G
chromatin Gene_EXP:MYH9 1_15381304_A_C,9_69516199_A_C,10_11921140_T_G,13_113159942_A_G
chromatin Gene_EXP:MYO1E 2_113934259_C_T,2_157299566_T_G,8_41957277_G_C,12_51745916_T_G,15_40767895_T_G
chromatin Gene_EXP:MYOF 10_11921140_T_G,12_51745916_T_G,8_122952205_T_G,10_50311228_T_G,5_181155466_T_G
chromatin Gene_EXP:NAA25 7_108023984_G_A
chromatin Gene_EXP:NAGK X_2856636_A_C
chromatin Gene_EXP:NAP1L1 7_2269556_T_A
chromatin Gene_EXP:NBR2 7_142944295_A_G,19_3179506_A_C
chromatin Gene_EXP:NCL 7_108023984_G_A,11_65547388_T_G,17_55774876_T_G,13_113159942_A_G,19_3281403_A_C
chromatin Gene_EXP:NDUFAF4 1_234373536_T_G,11_65547388_T_G,15_65451964_A_G,15_75524142_T_C
chromatin Gene_EXP:NDUFB9 19_4911043_A_C
chromatin Gene_EXP:NELL2 1_26457907_T_G,5_141432375_A_C
chromatin Gene_EXP:NFKBIZ 6_47579334_T_TAA
chromatin Gene_EXP:NIPSNAP1 2_60761746_T_G,2_86027990_C_A,5_181155466_T_G,9_37887606_C_T,12_51745916_T_G
chromatin Gene_EXP:NMRK1 12_7433515_G_T,16_55415_T_G
chromatin Gene_EXP:NOL11 1_1918090_A_G,8_7290003_A_C
chromatin Gene_EXP:NOLC1 1_234373536_T_G
chromatin Gene_EXP:NOP14 9_36058818_G_T,17_3513849_GCA_G
chromatin Gene_EXP:NOP58 3_196782572_G_T
chromatin Gene_EXP:NPC1 6_106621398_T_C
chromatin Gene_EXP:NRARP 5_181155466_T_G
chromatin Gene_EXP:NSL1 10_11921140_T_G,11_12162199_T_G
chromatin Gene_EXP:NUCB2 10_11921140_T_G
chromatin Gene_EXP:NUDT16 1_26457907_T_G
chromatin Gene_EXP:NUP35 19_9566733_T_G
chromatin Gene_EXP:NUPR1 11_20049928_A_C,12_40313960_G_T
chromatin Gene_EXP:OPTN 2_61492168_C_A,2_113934259_C_T,20_24959779_A_C,2_10086095_C_A,15_84241166_A_C
chromatin Gene_EXP:OSGEPL1 12_40313960_G_T
chromatin Gene_EXP:PA2G4 12_40313960_G_T
chromatin Gene_EXP:PARP1 13_113159942_A_G
chromatin Gene_EXP:PATZ1 11_12162199_T_G
chromatin Gene_EXP:PAX6 1_234309145_T_G,7_5227302_G_C,7_72942379_A_C,1_54243266_A_G,12_44376791_T_A
chromatin Gene_EXP:PDP1 1_248441636_T_G
chromatin Gene_EXP:PDSS1 5_180624003_T_C,12_40313960_G_T
chromatin Gene_EXP:PEA15 8_7290003_A_C,5_181155466_T_G,10_50311228_T_G,11_12162199_T_G,2_169735166_A_C
chromatin Gene_EXP:PFDN2 1_200988322_T_G
chromatin Gene_EXP:PHF5A 15_82430191_A_C,1_54243266_A_G,5_140841707_A_C,11_12162199_T_G,17_737856_G_T
chromatin Gene_EXP:PHLDA2 2_237510900_CGT_C,3_195668457_T_C,20_62310091_T_G
chromatin Gene_EXP:PHOX2A 12_51745916_T_G
chromatin Gene_EXP:PLAUR 7_72942379_A_C,11_12162199_T_G,12_51745916_T_G
chromatin Gene_EXP:PLOD1 2_113934259_C_T
chromatin Gene_EXP:POC5 12_9304133_T_C,12_31094748_T_C,Y_11344922_A_G
chromatin Gene_EXP:POLD1 17_36104042_G_T,19_9566733_T_G
chromatin Gene_EXP:POLE 2_217847583_C_T
chromatin Gene_EXP:POLG2 19_4911043_A_C,22_22098988_G_T
chromatin Gene_EXP:POLR1C 16_14868419_C_A
chromatin Gene_EXP:POU2F1 12_51745916_T_G
chromatin Gene_EXP:PPAT 14_55169342_TAAA_T,1_46261223_G_A,6_56557393_C_T,8_27431326_A_G,5_141478412_T_C
chromatin Gene_EXP:PPIC 2_66439901_A_C
chromatin Gene_EXP:PPP1CC 1_185150475_G_A,10_11921140_T_G,11_124896232_A_G
chromatin Gene_EXP:PPP1R3C 1_172308705_AT_A
chromatin Gene_EXP:PQLC3 10_11921140_T_G,16_18379704_T_G
chromatin Gene_EXP:PRCC 2_105307612_A_C,4_9908299_G_A,19_8943580_T_G
chromatin Gene_EXP:PRIM1 2_218827668_A_C
chromatin Gene_EXP:PRMT1 1_26034759_T_G,5_181155466_T_G
chromatin Gene_EXP:PSMB9 10_11921140_T_G,11_12162199_T_G,16_55415_T_G,X_2856636_A_C
chromatin Gene_EXP:PTGES3 1_26457907_T_G,1_149813302_A_C
chromatin Gene_EXP:PTP4A3 10_11921140_T_G
chromatin Gene_EXP:PTRF 13_113159942_A_G,10_11921140_T_G,12_57178583_A_C,8_122952205_T_G,8_7290003_A_C
chromatin Gene_EXP:PXDC1 7_159142364_T_G,11_65547388_T_G,13_113159942_A_G
chromatin Gene_EXP:RAB27A 7_108023984_G_A,1_150261398_T_G,7_108024001_C_T,16_20737706_A_C,12_6818898_A_C
chromatin Gene_EXP:RAN 10_11921140_T_G,19_3281403_A_C
chromatin Gene_EXP:RANBP1 6_30705792_T_G
chromatin Gene_EXP:RARRES3 1_213007133_T_G,12_40313960_G_T,16_87644643_G_A
chromatin Gene_EXP:RBM27 19_48617887_T_G
chromatin Gene_EXP:RBMX 2_113934259_C_T
chromatin Gene_EXP:RCAN1 2_66439901_A_C,7_159142364_T_G,8_7290003_A_C,11_65547388_T_G
chromatin Gene_EXP:RHOC 1_149852603_A_G,5_181155466_T_G,13_113159942_A_G,17_55774876_T_G
chromatin Gene_EXP:RNF135 6_30705792_T_G
chromatin Gene_EXP:RNF44 8_12430448_C_T,10_11921140_T_G
chromatin Gene_EXP:RNPS1 6_26033581_T_TAAG
chromatin Gene_EXP:RPAP1 2_96842345_G_C
chromatin Gene_EXP:RPL11 10_72344856_T_A
chromatin Gene_EXP:RPL13A 4_145127510_C_T,12_57470756_A_G,15_45095024_A_C,19_44985182_T_G,20_47227145_T_G
chromatin Gene_EXP:RPL19 2_61492168_C_A
chromatin Gene_EXP:RPL22 8_12430448_C_T
chromatin Gene_EXP:RPL3 2_24067801_G_A
chromatin Gene_EXP:RPL30 8_12430448_C_T
chromatin Gene_EXP:RPL32 8_12430448_C_T
chromatin Gene_EXP:RPRD2 1_146969331_G_A,1_146975626_G_A,1_148117837_C_T
chromatin Gene_EXP:RPS11 4_145127510_C_T,8_12430448_C_T,17_28613683_A_C
chromatin Gene_EXP:RPS28 15_43578884_A_G,17_18282629_T_G
chromatin Gene_EXP:RPS5 8_12430448_C_T
chromatin Gene_EXP:RPUSD4 15_75524142_T_C
chromatin Gene_EXP:RRP12 5_13829939_G_A
chromatin Gene_EXP:RSL1D1 17_55774876_T_G
chromatin Gene_EXP:RSL24D1 9_69516199_A_C
chromatin Gene_EXP:RUVBL1 1_247814785_G_A,1_247815694_A_G
chromatin Gene_EXP:S100A6 7_72942379_A_C,7_159142364_T_G,8_7290003_A_C,8_30756677_T_G,10_11921140_T_G
chromatin Gene_EXP:SAFB 8_7290003_A_C,10_11921140_T_G,13_113159942_A_G,14_55169342_TAAA_T
chromatin Gene_EXP:SAMD4A 8_7290003_A_C
chromatin Gene_EXP:SAMD9 5_181155466_T_G,8_7290003_A_C,11_12162199_T_G
chromatin Gene_EXP:SAMM50 17_76009153_A_C
chromatin Gene_EXP:SART3 10_11921140_T_G,11_12162199_T_G
chromatin Gene_EXP:SAT1 12_40313960_G_T
chromatin Gene_EXP:SELRC1 12_40313960_G_T
chromatin Gene_EXP:SEPHS1 2_113934259_C_T
chromatin Gene_EXP:SERF2 12_52013974_A_C
chromatin Gene_EXP:SERINC3 2_105307612_A_C
chromatin Gene_EXP:SETDB1 10_11921140_T_G
chromatin Gene_EXP:SFPQ 8_30756677_T_G
chromatin Gene_EXP:SGCE 15_59682341_T_A
chromatin Gene_EXP:SH3GLB1 20_42084724_T_C
chromatin Gene_EXP:SHF 2_108507561_T_G,7_149432379_A_C
chromatin Gene_EXP:SLC10A3 13_113159942_A_G
chromatin Gene_EXP:SLC25A43 1_54243266_A_G,8_7290003_A_C,19_7627786_T_G
chromatin Gene_EXP:SLC29A3 8_7290003_A_C,8_122952205_T_G,19_19498524_A_C
chromatin Gene_EXP:SLC2A10 8_7290003_A_C
chromatin Gene_EXP:SLC35D1 16_18379704_T_G
chromatin Gene_EXP:SLC35F5 13_113159942_A_G,17_6118065_A_G
chromatin Gene_EXP:SLC39A13 6_30705792_T_G,7_108023984_G_A
chromatin Gene_EXP:SLC5A6 7_108023984_G_A,14_22844242_T_G
chromatin Gene_EXP:SLC6A15 17_55774876_T_G
chromatin Gene_EXP:SLC9A7 19_4911043_A_C
chromatin Gene_EXP:SMARCA4 5_181155466_T_G,8_7290003_A_C,11_65547388_T_G
chromatin Gene_EXP:SMARCB1 3_197683305_A_C,5_80744593_A_C,19_9566733_T_G
chromatin Gene_EXP:SMARCD2 17_27646578_A_C
chromatin Gene_EXP:SMCR7L 11_12162199_T_G
chromatin Gene_EXP:SMPD1 7_72942379_A_C,16_87644643_G_A
chromatin Gene_EXP:SNRPB 8_119240272_G_C,12_9165341_A_C,20_36185166_C_G
chromatin Gene_EXP:SRPX2 11_65547388_T_G
chromatin Gene_EXP:SRSF1 16_87644643_G_A
chromatin Gene_EXP:SRSF7 7_108023984_G_A
chromatin Gene_EXP:SRSF7 5_181333681_C_T
chromatin Gene_EXP:STAT2 13_113159942_A_G
chromatin Gene_EXP:SUMF1 12_121752129_T_G,7_151560601_A_C,20_3864330_A_C,5_80744593_A_C,14_88622642_G_T
chromatin Gene_EXP:SUPT4H1 1_13281477_A_G,1_247949628_T_C
chromatin Gene_EXP:SYNC 15_42142087_A_C
chromatin Gene_EXP:SYTL2 10_11921140_T_G
chromatin Gene_EXP:TACC1 7_72942379_A_C,11_12162199_T_G,12_51745916_T_G,16_55415_T_G,16_15664675_G_T
chromatin Gene_EXP:TADA1 10_11921140_T_G,18_41955194_A_G
chromatin Gene_EXP:TAF3 15_75876091_T_G
chromatin Gene_EXP:TAF5 6_33799054_A_G,7_108023984_G_A,19_3281403_A_C
chromatin Gene_EXP:TAP1 5_181155466_T_G,8_7290003_A_C,10_11921140_T_G,11_12162199_T_G,20_42084724_T_C
chromatin Gene_EXP:TBC1D2 1_185150475_G_A
chromatin Gene_EXP:TCEAL4 5_127331576_G_A
chromatin Gene_EXP:TFAP4 5_181155466_T_G,11_65547388_T_G
chromatin Gene_EXP:TFB2M 6_32002466_A_C
chromatin Gene_EXP:TGOLN2 2_105307612_A_C,7_72942379_A_C,8_7290003_A_C,19_7740447_T_G,19_11402175_A_C
chromatin Gene_EXP:THOC5 1_54243266_A_G,3_197683305_A_C,22_22098988_G_T
chromatin Gene_EXP:TIGD1 1_150261398_T_G,17_55774876_T_G
chromatin Gene_EXP:TMBIM1 1_208039626_T_G,17_51169925_C_T,6_30329265_T_C,16_55415_T_G,2_105307612_A_C
chromatin Gene_EXP:TMCO3 5_37175989_A_G,5_37182800_G_A,5_37187387_G_A
chromatin Gene_EXP:TMED9 11_12162199_T_G,13_113159942_A_G
chromatin Gene_EXP:TMEM145 10_11921140_T_G,11_34452090_T_G
chromatin Gene_EXP:TMEM177 9_108900415_C_A,12_40313960_G_T
chromatin Gene_EXP:TMEM184B 13_113159942_A_G
chromatin Gene_EXP:TMEM229A 6_30705792_T_G
chromatin Gene_EXP:TMEM45A 17_41725799_T_G,X_47247581_T_G
chromatin Gene_EXP:TMEM50B 6_30642116_A_G,10_27223356_T_C,12_40313960_G_T,15_84241166_A_C
chromatin Gene_EXP:TMEM97 1_150261398_T_G,12_6818898_A_C,17_55774876_T_G,20_33848655_A_C
chromatin Gene_EXP:TOMM20 16_18379704_T_G,16_87644643_G_A,17_55774876_T_G,20_42084724_T_C,10_11921140_T_G
chromatin Gene_EXP:TOP1MT 20_763790_T_G
chromatin Gene_EXP:TPMT 2_61492168_C_A,9_37887606_C_T,11_12162199_T_G
chromatin Gene_EXP:TRAM2 11_12162199_T_G,12_40313960_G_T,13_113159942_A_G
chromatin Gene_EXP:TRAP1 9_69516199_A_C
chromatin Gene_EXP:TRIM28 19_40695973_T_G
chromatin Gene_EXP:TRIP6 12_51745916_T_G
chromatin Gene_EXP:TSEN54 11_12162199_T_G,13_113325635_A_G
chromatin Gene_EXP:TTLL12 1_220067324_T_G
chromatin Gene_EXP:TUBA4A 7_159142364_T_G,11_65547388_T_G
chromatin Gene_EXP:TWSG1 12_51745916_T_G
chromatin Gene_EXP:UBA52 11_65547388_T_G,12_40313960_G_T,13_113159942_A_G
chromatin Gene_EXP:UBE2O 1_155747580_A_G,6_30705800_T_G,10_11921140_T_G,20_42084724_T_C
chromatin Gene_EXP:UBXN7 1_26457907_T_G,22_24252424_G_C
chromatin Gene_EXP:UEVLD 10_11921140_T_G,11_43920052_A_C,X_2856636_A_C
chromatin Gene_EXP:UPP1 2_61492168_C_A
chromatin Gene_EXP:USP6NL 2_237553681_A_G
chromatin Gene_EXP:UTP18 8_7290003_A_C
chromatin Gene_EXP:UTRN 2_105307612_A_C,7_108023984_G_A,17_80962613_A_C,19_4911043_A_C
chromatin Gene_EXP:VARS 15_75524142_T_C
chromatin Gene_EXP:VASH2 5_181155466_T_G
chromatin Gene_EXP:WASF1 2_108507561_T_G,10_43200831_A_G,16_55415_T_G
chromatin Gene_EXP:WDR12 6_29588459_T_G,7_149253814_T_G,1_154331414_T_G,12_40313960_G_T,3_142177436_A_G
chromatin Gene_EXP:WDR18 1_64663808_A_C
chromatin Gene_EXP:WDR3 5_88722571_GA_G,10_5909062_T_C
chromatin Gene_EXP:WDR75 2_190469793_G_C,1_154331414_T_G,3_196782572_G_T,7_149253814_T_G,18_14183954_G_T
chromatin Gene_EXP:WHAMM 2_113934259_C_T
chromatin Gene_EXP:WIPI1 1_155709773_T_G,2_127651579_A_C
chromatin Gene_EXP:WNK2 10_11921140_T_G
chromatin Gene_EXP:WWTR1 3_128945112_G_A,10_11921140_T_G,16_1817242_T_C
chromatin Gene_EXP:XPO5 11_65547388_T_G,15_75524142_T_C
chromatin Gene_EXP:YARS2 4_41631305_C_A,4_41632760_G_C
chromatin Gene_EXP:YEATS4 1_12001708_A_G,6_31966660_T_G,12_6818898_A_C,19_9566733_T_G
chromatin Gene_EXP:ZBED4 2_108507561_T_G,11_65547388_T_G
chromatin Gene_EXP:ZBTB39 16_30953637_A_C
chromatin Gene_EXP:ZBTB4 6_30705792_T_G,10_11921140_T_G,17_55774876_T_G
chromatin Gene_EXP:ZC3H8 11_12162199_T_G
chromatin Gene_EXP:ZNF124 2_170965958_A_C,13_113159942_A_G,17_55774876_T_G
chromatin Gene_EXP:ZNF22 2_97507111_G_A
chromatin Gene_EXP:ZNF33B 1_112520503_A_G
chromatin Gene_EXP:ZNF581 8_12430448_C_T
chromatin Gene_EXP:ZNF689 3_53183591_A_C
chromatin Gene_EXP:ZNF74 11_65547388_T_G,17_55774876_T_G,2_113934259_C_T,2_61492168_C_A,5_181155466_T_G
[표 17]에 제시된 FRH 들이 해당 유전자(gene) 발현과의 상관도(P-value) 및 약물과의 상관도(P-value)를 산출한 결과가 아래 [표 18]에 정리되어있다.
또한, [표 17]에 제시된 FRH들이 포함되어 발현된 유전자들 중 주요 유전자와 각각의 CHROMATIN 약물과의 상관도(P-value)를 산출한 결과가 도 32에 도시되어 있다.
이들 [표 18] 및 [도 32]로부터 [표 18] 및 [도 32]에 공통적으로 낮은 P-value값을 갖는 유전자(gene)에 포함된 FRH(s)가 CHROMATIN 약물 반응성을 판단하기 위한 바이오마커로 실효성이 높은 것으로 판단할 수 있다.
DrugPathway GENE Variants Var _Drug( pval ) Var _ Exp ( Pval )
chromatin SPR_1 chr2_72891611_A_C 1.13E-09 0.000101783
chromatin BCL9L_1 chr11_118897861_A_C 3.13E-08 0.034238861
chromatin ZDHHC7_1 chr16_84981848_T_G 1.25E-07 0.007398316
chromatin CCDC69_1 chr5_151185396_T_C 2.83E-07 0.005439839
chromatin DDX60_1 chr4_168220820_G_T 4.91E-07 0.047715445
chromatin RASSF5_1 chr1_206507640_A_C 6.00E-07 0.042432506
chromatin C21orf58_1 chr21_46302477_A_G 5.32E-06 0.028316032
chromatin KIAA0922_1 chr4_153466445_G_C 1.35E-05 0.014460739
chromatin NR2F2_1 chr15_96331144_C_T 1.41E-05 0.041165877
chromatin WWC2_1 chr4_183261395_G_T 2.29E-05 0.017749371
chromatin ERRFI1_1 chr1_8013331_A_G 3.34E-05 0.000188249
chromatin KIAA1191_1 chr5_176361895_T_C 4.29E-05 0.02279099
chromatin QSOX1_1 chr1_180196892_T_G 5.61E-05 0.048904626
chromatin NTN4_1 chr12_95683554_A_C 5.86E-05 0.007698614
chromatin KIFC3_1 chr16_57765532_T_G 6.78E-05 0.038497261
chromatin LPP_1 chr3_188484677_T_G 7.25E-05 0.027828249
chromatin TUFT1_1 chr1_151565936_G_A 8.20E-05 0.004559558
chromatin CDC14B_1 chr9_96496393_T_TACC 0.000102442 0.034844355
chromatin DTX1_1 chr12_113093500_A_T 0.000105094 0.02107386
chromatin P4HA2_1 chr5_132227207_C_T 0.000133282 0.048816114
chromatin ARHGAP25_1 chr2_68818005_T_G 0.000231771 0.004043302
chromatin TIMM13_1 chr19_2425296_G_C 0.000236058 0.025389471
chromatin CAST_1 chr5_96741643_A_C 0.000249549 0.007284203
chromatin PTPN12_1 chr7_77627576_G_C 0.000317226 0.012844299
chromatin MED28_1 chr4_17614675_T_G 0.000322999 0.029816577
chromatin SLC35F5_1 chr2_113723196_TA_T 0.000333219 0.009792442
chromatin TPBG_1 chr6_82364929_T_C 0.000334942 0.003828919
chromatin CD79B_1 chr17_63932334_A_C 0.000528438 0.048052988
chromatin DIRC2_1 chr3_122856322_A_G 0.000825084 0.013416691
chromatin UEVLD_1 chr11_18558312_C_A 0.000960879 0.026771319
chromatin LRP10_1 chr14_22875577_A_C 0.001001744 0.013008771
chromatin UGDH_1 chr4_39504307_CA_C 0.001468644 0.048378289
chromatin VMP1_1 chr17_59841357_A_C 0.001495454 0.00700708
chromatin DOT1L_1 chr19_2190948_TTGG_T 0.001590625 0.039142783
chromatin OSMR_1 chr5_38933647_C_T 0.001601244 0.048095084
chromatin CYR61_1 chr1_85581605_TA_T 0.001618999 0.000620768
chromatin EMP1_1 chr12_13211531_T_G 0.001632317 0.001600571
chromatin PRDM2_1 chr1_13781628_C_T 0.001853506 0.028812792
chromatin UBE2N_1 chr12_93411182_C_T 0.001919604 1.51E-06
chromatin PDE7A_1 chr8_65724444_TATAA_T 0.001930609 0.049491005
chromatin ZNF775_1 chr7_150397765_G_A 0.002410672 0.02103353
chromatin ACSS2_1 chr20_34920910_T_G 0.002415783 0.038456731
chromatin TNRC6C_1 chr17_78049826_A_C 0.002419277 0.037719795
chromatin OPTN_1 chr10_13108909_T_C 0.002658339 0.009854403
chromatin FHL2_1 chr2_105398737_G_C 0.002849654 0.020214714
chromatin TSR2_1 chrX_54440646_T_G 0.003023868 0.016676081
chromatin PON2_1 chr7_95406313_A_C 0.003172125 9.37E-06
chromatin RIN2_1 chr20_19990244_G_A 0.003495398 0.013004393
chromatin ACVR1_1 chr2_157780624_GA_G 0.003989606 0.003394881
chromatin ARRB2_1 chr17_4720324_T_G 0.004024916 0.04522165
chromatin STRBP_1 chr9_123266116_C_G 0.005108062 0.001078377
chromatin APLP2_1 chr11_130110790_G_A 0.006767893 0.002129537
chromatin PPM1D_1 chr17_60656555_C_G 0.007483948 0.004279928
chromatin MICALL2_1 chr7_1442358_T_G 0.008296918 0.00384944
chromatin SDC4_1 chr20_45330303_T_G 0.00885313 0.000496261
chromatin MAP4K1_1 chr19_38617327_T_G 0.009035501 0.013203631
chromatin DDX51_1 chr12_132144264_G_A 0.00950629 0.039746501
chromatin CD63_1 chr12_55725568_A_C 0.010191282 0.006277176
chromatin TSEN34_1 chr19_54192354_T_G 0.015320711 0.001848481
chromatin RND3_1 chr2_150487464_GA_G 0.016355986 0.009852344
chromatin DYNC1LI2_1 chr16_66723584_GTTT_G 0.020987801 0.00547115
chromatin ATG4D_1 chr19_10547046_A_G 0.025677384 0.001170719
chromatin TEAD4_1 chr12_3019250_C_T 0.025841261 0.001625407
chromatin SPATS2L_1 chr2_200329386_C_A 0.025958546 0.003348759
chromatin TCF3_1 chr19_1627423_T_C 0.04297822 0.006623288
chromatin GPX8_1 chr5_55164338_T_C 0.043500083 0.000150103
chromatin CHD7_1 chr8_60781091_A_C 0.049386713 0.009144258
chromatin IQCB1_1 chr3_121788568_C_T 0.049430015 1.56E-06
chromatin CD84_2 chr1_160549875_A_G,chr1_160550877_C_G 0.00011388443370850483,0.0007812325110491749 0.011914227680681896,0.04088607952168802
chromatin GSN_2 chr9_121300011_T_G,chr9_121321305_A_C 0.00014939533964484881,0.03316947281106813 0.027350252864946387,0.0036521684936499576
chromatin PTPRC_2 chr1_198703381_A_C,chr1_198752063_T_C 0.00016494389721910315,0.0013479983597789753 0.02703768662070396,0.04525193826667434
chromatin DAG1_2 chr3_49531399_T_G,chr3_49530812_A_G 0.00020026524182288077,0.006009115344867996 0.000829773140052924,0.031395065099950874
chromatin CLEC16A_3 chr16_11156556_C_A,chr16_11060913_G_A,chr16_11042191_C_G 0.0002094249249848047,6.263351817687237e-07,0.000591215275919509 0.00562768771681351,0.001657798405900209,0.0008509758531100063
chromatin SEMA3C_2 chr7_80748927_A_C,chr7_80758439_T_G 0.00023588106210457256,0.002402247845707725 0.04566908222348532,0.022537466343331126
chromatin MYO1E_3 chr15_59272288_G_C,chr15_59223315_G_A,chr15_59138181_A_C 0.0002531868313324391,0.017294701356675626,0.012353995820357604 0.006181875879725325,0.0073567891788311425,0.000506485287819266
chromatin FBRSL1_2 chr12_132582046_C_T,chr12_132490757_A_G 0.0002541174963279791,0.0016132414574028821 0.017168862085872382,0.014332097218830869
chromatin PLAUR_2 chr19_43665377_C_A,chr19_43665506_A_C 0.0004816822177162012,0.000329711238045009 0.013703989625456308,0.02821338934893095
chromatin UPP1_2 chr7_48108129_C_G,chr7_48108147_T_G 0.0005053096271809359,0.032569834532674265 0.0002337913556195707,0.0015081620173450355
chromatin TM4SF1_3 chr3_149375338_T_G,chr3_149375342_T_G,chr3_149375345_A_G 0.0006450924297222392,0.00041880937510606033,0.0045963625050391855 0.00025288036755393063,0.005766354533635817,0.02993773631668
chromatin ZNF430_4 chr19_21020746_C_T,chr19_21022725_C_T,chr19_21034405_A_G,chr19_21022773_T_G 0.0006475458714423392,0.0074498992574896375,0.001227492240630532,0.0008007999312255407 0.0014493947676260713,7.931044376997757e-06,0.043344266998276815,0.024171318376603662
chromatin CYTIP_2 chr2_157427544_C_T,chr2_157427198_A_G 0.000837855207497095,0.004314698497827655 0.016967272956506692,0.0066627404504453576
chromatin FAM129B_3 chr9_127531490_GA_G,chr9_127525143_T_G,chr9_127578821_C_G 0.000922821517572468,0.0002411893320187629,8.276570085958934e-05 0.031013612085774283,0.010661251800502545,0.0009666899162254512
chromatin SEC11C_2 chr18_59152698_T_C,chr18_59139887_T_G 0.0009260156067678403,0.049013482279269986 0.0022574597582570113,0.007830715004334495
chromatin SERPINB6_3 chr6_2955641_A_C,chr6_2955644_A_C,chr6_2959401_A_C 0.001043382693355795,0.024971781697072672,0.0010045092345408332 0.01355817950847752,0.003892754006925403,0.039976665559382514
chromatin HEXB_5 chr5_74696581_T_G,chr5_74696784_G_A,chr5_74715459_CT_C,chr5_74715716_T_A,chr5_74715716_T_TA 0.0011109425360834742,0.0004588063308077307,0.00032306189000466006,0.0012875359612772113,0.013801634858228495 0.0076182846696747,0.037654298343869685,0.0009700644073606587,0.0006894634360309071,0.008716125756790354
chromatin CHAF1A_5 chr19_4431899_C_T,chr19_4442339_C_T,chr19_4443049_T_C,chr19_4422720_A_G,chr19_4442532_T_C 0.0013371878989745694,4.704638650715319e-06,0.002601657035134123,0.00848724820837247,0.0008277326854784058 1.913287638550038e-06,2.142565869765625e-07,2.294297809586175e-06,0.024620616607439628,0.010330162535447171
chromatin DTNBP1_5 chr6_15522870_T_C,chr6_15662701_T_G,chr6_15524467_T_C,chr6_15637909_C_A,chr6_15651411_GA_G 0.00140727662017035,0.0007340285829190258,0.000563588210134313,0.0015365486679584585,0.012631556103580063 0.02838345350893315,0.001004314451212422,0.0038345211108275156,0.02038116210082405,0.0014349866138238813
chromatin NPC1_6 chr18_23533587_A_G,chr18_23531466_TG_T,chr18_23543332_G_GA,chr18_23556539_A_C,chr18_23551637_T_C,chr18_23540944_CT_C 0.001437129484746987,7.150026947753571e-05,0.0029007221429512673,0.0002201554381797956,0.00283655966462793,0.003557570436749789 0.049542946772028126,0.03680603821841593,0.0011845211365567286,0.011218938268584914,0.00977392034448968,0.040822963170832685
chromatin DCK_2 chr4_71023678_G_A,chr4_71023683_A_T 0.0025792753639569685,0.004519208391207111 0.0495745351142595,0.03292890320415958
chromatin MYOF_5 chr10_93402739_A_T,chr10_93341723_C_T,chr10_93456833_C_T,chr10_93359764_G_A,chr10_93379679_T_C 0.0031553117726987327,0.0003251886046767745,0.0012115888716542418,0.0011033881652818386,1.1152022033742226e-05 0.008275987890594253,1.0154009952651607e-05,4.5730649026336375e-05,0.04572104850464974,0.0006543495060757152
chromatin CNOT6L_4 chr4_77720488_T_G,chr4_77819455_A_C,chr4_77720486_A_G,chr4_77726534_A_C 0.003413275456645043,0.004884718330098437,1.3017900050261066e-05,0.013675885143940456 0.00045440611666765506,0.0041059419980858354,0.003812687853894012,0.002323583718729919
chromatin SNX24_2 chr5_122845530_G_A,chr5_123023772_TA_T 0.003825812212204896,0.005412166991196986 0.032851178784777335,0.010215103992736332
chromatin SQSTM1_4 chr5_179833153_C_T,chr5_179833213_G_A,chr5_179822433_T_C,chr5_179832842_G_C 0.004089948495769615,0.007896407107059047,1.0391418374918043e-11,5.901642675392869e-07 0.014656854055438881,0.015290841042493631,0.0024949336391905503,0.0024314650981475784
chromatin CTTN_7 chr11_70419876_A_C,chr11_70419880_T_C,chr11_70433755_A_G,chr11_70433765_G_C,chr11_70407283_C_T,chr11_70433037_T_G,chr11_70435435_C_T 0.004793877560857165,0.0029267237988671235,0.0002662301400632249,2.1853977605406948e-05,5.710606729324503e-07,0.00010373335018763256,0.002764146814493288 0.00030309409522359497,0.003131141961303907,0.02047999046614251,0.008528354106314544,0.005941149857145408,0.004388396641544275,0.013709818259161087
chromatin KDM2B_4 chr12_121580903_A_C,chr12_121579943_C_CA,chr12_121444386_T_G,chr12_121580252_TG_T 0.004804220239616889,5.298915204579247e-06,7.807472174797022e-08,0.024172279934987287 0.04290936139558865,0.01794421156168876,0.019501973878425127,0.004964292850525796
chromatin CTNNA1_4 chr5_138812304_T_G,chr5_138824633_A_C,chr5_138933920_C_T,chr5_138812289_C_G 0.005041441550878414,0.009914746459480685,0.00032076772718977635,0.013542487211798218 0.013339032203366944,0.004284224604488671,0.00010488952235634391,0.0010251811268691103
chromatin TRIOBP_2 chr22_37751927_A_C,chr22_37757383_C_G 0.0053165450762140245,0.0016386338499532257 0.008760146502383994,8.295724649894844e-05
chromatin EGR1_2 chr5_138467153_A_C,chr5_138466811_A_C 0.005590395913285018,0.00018684738505679937 0.006707694887573882,0.00027393305226194143
chromatin MYCBP2_8 chr13_77070727_G_A,chr13_77165156_A_T,chr13_77098982_T_G,chr13_77051091_G_A,chr13_77051098_A_C,chr13_77058230_T_G,chr13_77061586_T_C,chr13_77267898_T_G 0.008036895878308711,0.012181733375411912,0.0004449974043640469,0.0007742974469162077,0.004690941013903492,0.022811552981952272,0.0002327215378800939,0.004205585533754351 0.029852585169277374,0.00045980757332588846,0.0038229074053839733,0.00017518564876142542,4.397700485560215e-05,0.0032117224925540928,0.030373685856290068,0.00592396173483849
chromatin TCF4_6 chr18_55464257_C_A,chr18_55463971_TGTGTGTGA_T,chr18_55275657_A_G,chr18_55275664_A_G,chr18_55403517_A_C,chr18_55461237_G_T 0.008090959269238968,0.0056178520760126974,0.001559758175866868,0.012472558742737408,0.0011862271176169732,0.006912522905586032 0.032420073593804284,0.03333184670009802,0.0013930308437610063,0.00619762753769391,1.5397131093463103e-06,0.04572000946513434
chromatin LAMC1_3 chr1_183132309_A_C,chr1_183131203_C_T,chr1_183131172_CAA_C 0.008181813089040216,3.4320876665108484e-05,0.02745630451997897 0.01655294869349123,0.03400723316751987,0.002417084109353407
chromatin DCBLD2_2 chr3_98800637_G_A,chr3_98822022_G_A 0.00885632710582371,0.003195091628487625 0.02405283820151249,0.02321925017861924
chromatin FAM114A1_2 chr4_38905545_G_A,chr4_38905553_A_G 0.008914101428030875,9.057397575383816e-05 0.004385515653682114,0.0017226027017899913
chromatin RXRA_2 chr9_134379472_C_A,chr9_134432274_T_C 0.01212893284996885,0.0010613625702847742 0.008306707838893354,0.02628295923936911
chromatin TXNL4A_2 chr18_80033872_T_C,chr18_79988525_A_C 0.013055851849266827,0.0007334523399616647 0.0008431735834914795,0.0008431735834914795
chromatin PLOD1_3 chr1_11957799_T_G,chr1_11958607_A_C,chr1_11949823_T_G 0.016423562694112787,0.0001256608005905079,0.00021455234639659347 0.008642421166450967,0.04289731210522306,0.033198246352540164
chromatin ZBTB40_2 chr1_22508509_T_G,chr1_22490438_G_C 0.019306644087308318,0.0028404969140742 0.007412910007401148,0.034427044070664166
chromatin LAMB1_4 chr7_107937003_CT_C,chr7_107937011_T_C,chr7_107932321_G_T,chr7_107962914_G_C 0.02001404015878396,0.03127808008490267,2.518001172595479e-05,0.001938778625683203 0.0036685711722291453,0.0056496711183904105,0.008417008915963444,0.03562871053322305
chromatin ZNF407_2 chr18_74635526_T_C,chr18_74631665_A_C 0.02054827360868693,0.0027671214071800644 0.0030145474545959137,0.0007578348015755224
chromatin PLK2_2 chr5_58457156_TA_T,chr5_58459186_CA_C 0.02678606136810066,0.011492772698233265 0.0067079016563832035,0.009712841903254471
chromatin ITGAV_6 chr2_186622542_G_T,chr2_186637080_T_G,chr2_186637084_A_G,chr2_186602110_C_T,chr2_186665096_ATTT_A,chr2_186665096_ATTT_AT 0.02893229553935201,1.7690277512995773e-05,5.7650114136378393e-05,0.0008794014178128033,0.0009612996704148748,0.0001992070205841996 0.0007084667177580308,0.001139110475330106,0.032143834630956734,0.02901306245899837,0.02901306245899837,0.044847327779240435
chromatin TPP2_4 chr13_102649187_G_T,chr13_102654868_C_T,chr13_102663598_G_C,chr13_102663763_G_A 0.03448812010250688,0.0477208297438401,0.019367023504440688,0.03879139461694567 0.0003388682906380855,0.0002674729630147893,5.0196213345567326e-05,0.0001694198597404117
chromatin EGFR_2 chr7_55205133_G_A,chr7_55205662_A_C 0.03713506709789649,0.0018125796749231603 0.003745674667154008,0.0007797573368817686
chromatin FAM57A_2 chr17_733080_T_TCTC,chr17_733026_A_AGGGCC 0.039798318296646464,0.015321230586696297 0.00016240672631849488,4.5958865963508443e-05
chromatin RBFOX1_2 chr16_7676807_A_C,chr16_7653705_T_G 1.089283918433845e-06,0.009933638723622762 0.017746981967786752,0.040139058541755146
chromatin PLEC_10 chr8_143935900_T_G,chr8_143916360_A_G,chr8_143917054_T_G,chr8_143917234_T_G,chr8_143918739_A_C,chr8_143919099_A_G,chr8_143925385_A_C,chr8_143919088_C_G,chr8_143927138_G_A,chr8_143930017_C_T 1.2060887811693293e-09,0.0045339553290741135,0.000104533588224814,1.7757593439950334e-05,0.00011641011921845986,1.9686417676937634e-05,0.006102754107095385,0.01695040934478527,0.039180192965724406,0.017591680187249745 0.0004960012901022363,0.00910116635228719,0.025072704488480143,0.013279688389245713,2.138708286444241e-05,0.0010288222361061275,0.0062995698781779215,0.009415988048366521,0.008162873576760793,0.001268625363946227
chromatin ACTN1_2 chr14_68904620_A_G,chr14_68879945_C_A 2.2790061519900746e-05,0.002826959920374089 0.01924890787722053,0.03820518094606298
chromatin YES1_2 chr18_724697_A_C,chr18_732727_A_G 2.3090624801719088e-05,0.007129044591559579 0.008883311549914912,0.026256278963938562
chromatin SMARCC1_2 chr3_47662444_T_G,chr3_47735913_C_T 2.3383243293118917e-06,0.002421910157609216 0.0017680794934126945,0.01814701077813162
chromatin LMNA_2 chr1_156139242_AT_A,chr1_156138783_A_G 2.3951192128687798e-05,0.0022551444971150103 0.04237931129547261,0.040758441980734486
chromatin CCND1_2 chr11_69650913_A_G,chr11_69651969_C_G 2.86821845503723e-06,0.0004216841283241181 0.024298615321604846,0.021515769887785408
chromatin SMARCA4_3 chr19_11025539_C_G,chr19_11025639_C_T,chr19_11059900_G_C 3.0403566208171576e-05,9.60336281664007e-06,0.00028978302130045137 0.00029624992802644123,0.02706216606857304,0.035243495124704975
chromatin KMT2C_7 chr7_152273692_G_A,chr7_152235860_C_T,chr7_152145265_T_G,chr7_152152848_C_A,chr7_152177504_T_G,chr7_152236218_G_A,chr7_152152869_A_G 4.1091183934080156e-05,0.03814263508657298,0.010803753158495692,0.018128565763915704,0.001183790631102062,0.008327722660599219,0.017441444102837326 0.02044755694417402,0.00015664974968742393,0.0030671124260532785,0.00028670765106413883,0.0007976241891358237,0.0009326888762057726,0.008191480303636886
chromatin PXN_2 chr12_120219856_A_C,chr12_120219864_A_C 4.578278108445838e-05,0.0074220837424624425 0.0003630643828121584,0.0023389819820739933
chromatin BCOR_2 chrX_40052275_A_C,chrX_40074609_T_G 4.939704915952993e-09,0.0027449638737320047 0.00020414397606395237,0.02744186131378764
chromatin FLI1_2 chr11_128810729_A_G,chr11_128810736_G_C 5.306393173162265e-05,0.004212940238900314 1.6562593178924343e-05,1.4658089385344776e-05
chromatin LAMB2_4 chr3_49121431_A_C,chr3_49126013_T_G,chr3_49125146_T_G,chr3_49121239_T_G 5.5170807525836925e-05,0.03902097870402451,7.419230761410297e-05,0.003164093062093864 2.9470349723526757e-05,0.002569958840604656,0.002569958840604656,0.028556312248339717
chromatin HMGA2_2 chr12_65841991_CT_C,chr12_65838525_G_A 5.57550946086e-05,0.039914434884169736 0.032926686839147117,0.00575414262140414
chromatin ZNF708_3 chr19_21294577_C_T,chr19_21309149_T_A,chr19_21309260_G_A 5.694223127781568e-05,9.010844850080123e-06,0.0003481251422158083 0.007544201865148675,0.008126720123629898,4.891895383413758e-05
chromatin ASPH_2 chr8_61578734_T_G,chr8_61578968_A_C 6.56790692451237e-08,0.0009758798617439217 0.00027481062695969863,0.0029272870469332557
chromatin CCAR1_5 chr10_68737016_C_A,chr10_68736998_A_C,chr10_68747386_A_C,chr10_68749170_A_C,chr10_68747145_CT_C 8.229773536774104e-06,0.007146867657347806,0.0011117731660420908,0.0013852137674061765,0.003664158474067453 0.003954046326130957,0.005283569468845993,0.002868590533518923,0.044268019704288585,0.007417608363424872
chromatin DOCK1_3 chr10_127008567_ATAACT_A,chr10_127248024_G_T,chr10_127414990_T_G 9.077419985352092e-05,0.0002745710836507499,0.00705137247255559 0.0011610761862802675,0.020184142497530616,0.047170945666414485
EGFR signaling 약물에 대한 반응성 바이오 마커
Drug_Class Gene_exp 바이오마커 ( 발현조절변이세트 )
egfr Gene_EXP:ACLY 15_26976868_T_A
egfr Gene_EXP:ACSF2 2_71393433_A_G,2_71424561_G_GT,2_71428456_T_A,2_71433365_T_TC
egfr Gene_EXP:ADTRP 4_20727343_G_C
egfr Gene_EXP:AHI1 2_102664958_A_C
egfr Gene_EXP:AIM1 11_124396830_G_A
egfr Gene_EXP:AMN 12_52057489_T_C
egfr Gene_EXP:ANO5 12_9427796_G_T
egfr Gene_EXP:AP1M2 1_168044966_T_A,8_17562030_G_A,6_31112217_C_T,6_31138682_C_A,1_2491175_G_A
egfr Gene_EXP:APBB1 7_117548606_ATG_A
egfr Gene_EXP:ATP10B 3_123931600_TAA_TA,14_19303535_T_C,17_39709512_T_C
egfr Gene_EXP:ATP6V0B 17_78529723_C_G
egfr Gene_EXP:AVPI1 3_157413999_A_C
egfr Gene_EXP:BARX2 3_101857038_T_C
egfr Gene_EXP:C12orf57 1_103082763_C_G
egfr Gene_EXP:C16orf45 1_151848276_A_C,6_46140015_C_G,6_46161608_G_A,6_46167752_T_C,6_46168247_G_T
egfr Gene_EXP:C1orf116 3_129272155_T_C
egfr Gene_EXP:C3orf52 3_111919285_A_C,3_101857038_T_C,10_1020770_C_T
egfr Gene_EXP:CAMSAP3 12_14460981_T_A,19_9985806_C_T,19_9986005_G_A
egfr Gene_EXP:CAV1 10_133626829_C_T
egfr Gene_EXP:CCND3 7_151221500_CT_C,14_68477626_CT_C
egfr Gene_EXP:CDH3 7_140753336_A_T
egfr Gene_EXP:CDK13 1_26457907_T_G,22_30937565_T_G
egfr Gene_EXP:CDK6 6_31662176_A_G,6_31662464_C_T
egfr Gene_EXP:CEBPD 6_150926303_A_G
egfr Gene_EXP:CENPM 19_10793898_A_C
egfr Gene_EXP:CES2 8_17085328_C_T
egfr Gene_EXP:CHGB 15_67236036_T_G
egfr Gene_EXP:CHN1 17_81206909_A_C
egfr Gene_EXP:CLIP3 5_163482681_G_A
egfr Gene_EXP:CNPY4 17_48728228_G_A
egfr Gene_EXP:CRB3 20_32983679_C_T
egfr Gene_EXP:CRYBA2 17_19742625_A_C
egfr Gene_EXP:CYB561 17_75618277_G_A,17_75620366_A_T
egfr Gene_EXP:DAPP1 13_113835487_C_T,18_70325196_C_T,19_56053761_G_A
egfr Gene_EXP:DDR1 2_174801578_A_G,4_89936328_G_A
egfr Gene_EXP:DDX25 2_61492168_C_A,5_181155466_T_G,7_72942379_A_C,11_43920052_A_C,12_40313960_G_T
egfr Gene_EXP:DDX60L 6_143772215_C_T
egfr Gene_EXP:DENND5A 16_14764032_A_G
egfr Gene_EXP:DNMT3A 22_36566306_C_G
egfr Gene_EXP:DPY19L3 15_65564315_G_A,17_78425362_G_A,17_78427070_C_T
egfr Gene_EXP:DQX1 1_113907966_C_T
egfr Gene_EXP:DSC3 11_18285498_T_C,11_18311889_A_T
egfr Gene_EXP:DTX3L 4_185267219_TA_T
egfr Gene_EXP:DYNC1LI1 12_56346229_GAGA_G
egfr Gene_EXP:EGFR 1_16027940_A_T,1_16048568_C_G
egfr Gene_EXP:EMP3 16_14764032_A_G,17_75620366_A_T
egfr Gene_EXP:EPSTI1 2_226796327_T_C
egfr Gene_EXP:ERBB2 1_225042906_C_T,1_225085546_G_T
egfr Gene_EXP:ERO1L 6_47579334_T_TAA
egfr Gene_EXP:ESRP1 20_32983679_C_T
egfr Gene_EXP:EVPL 15_84798628_G_A
egfr Gene_EXP:FAM136A 1_16048568_C_G,16_50711362_A_C
egfr Gene_EXP:FAT2 19_15807367_G_T
egfr Gene_EXP:FGFBP1 2_65069680_A_C,17_81206909_A_C
egfr Gene_EXP:FRMD4B 20_32983679_C_T
egfr Gene_EXP:FXYD3 1_110407655_G_A,16_1210969_G_A,9_88647579_G_T,22_50625559_G_C,10_103724260_T_C
egfr Gene_EXP:FZD3 1_26457907_T_G
egfr Gene_EXP:GALNT3 3_7680310_G_A,6_150945502_T_G
egfr Gene_EXP:GBP1 3_55480738_A_T
egfr Gene_EXP:GJB2 1_44978366_G_A
egfr Gene_EXP:GJB3 6_129475475_C_T,17_7461905_T_G,20_32983679_C_T
egfr Gene_EXP:GJB5 6_129475475_C_T,16_16349121_A_G,20_32983679_C_T
egfr Gene_EXP:GJB6 1_44978366_G_A
egfr Gene_EXP:GLTP 2_182994745_T_C
egfr Gene_EXP:GNAQ 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T
egfr Gene_EXP:GNB3 X_135719129_C_T
egfr Gene_EXP:GPC1 1_54243266_A_G,10_74988957_T_G,7_75364819_A_C,17_7797836_A_C,3_113344632_A_C
egfr Gene_EXP:GPC1 3_184278425_C_T
egfr Gene_EXP:GPR87 19_15807367_G_T
egfr Gene_EXP:GRB7 7_152648922_C_T
egfr Gene_EXP:GRHL2 20_32983679_C_T
egfr Gene_EXP:GYLTL1B 7_5938011_C_CCA,7_5945090_C_T
egfr Gene_EXP:HSD17B10 5_24511259_C_T
egfr Gene_EXP:ICAM1 8_12358868_A_G
egfr Gene_EXP:IFIT3 18_50806833_C_G
egfr Gene_EXP:IFIT5 6_169632990_G_A,6_169665646_G_A
egfr Gene_EXP:IGSF9 11_27340812_T_G,14_21082261_T_G,19_12690012_T_G
egfr Gene_EXP:INADL 2_241246976_C_T,3_58285236_T_C,16_75166518_T_C
egfr Gene_EXP:ITGA6 9_111758806_C_T,12_6952191_A_C
egfr Gene_EXP:JAG2 1_1971961_T_G,7_48043449_T_G
egfr Gene_EXP:JSRP1 15_22573256_T_G
egfr Gene_EXP:KCTD18 9_60935641_T_G
egfr Gene_EXP:KLC3 20_32983679_C_T
egfr Gene_EXP:KLK6 4_48170201_C_T,4_48170249_G_A
egfr Gene_EXP:KLRG1 21_42543649_A_G,21_42565845_G_A
egfr Gene_EXP:KRT5 3_10200303_A_C
egfr Gene_EXP:KRT6A 22_50576781_G_C
egfr Gene_EXP:LAD1 11_118555347_C_A
egfr Gene_EXP:LAD1 19_12528668_A_C
egfr Gene_EXP:LAMC2 18_63659363_A_C,18_63659368_A_G
egfr Gene_EXP:LEPRE1 1_205849911_C_T,1_205849976_G_A,4_68337362_T_C,4_182680440_G_C,4_182680513_G_A
egfr Gene_EXP:LEPRE1 20_32983679_C_T
egfr Gene_EXP:LRRC1 1_156743766_G_A
egfr Gene_EXP:LRRC8A 5_173158713_A_G
egfr Gene_EXP:MAD2L2 7_117548606_ATG_A
egfr Gene_EXP:MAN1B1 19_57455681_G_T,19_57455765_G_A,19_57473550_A_G,19_57490144_T_A,19_57507480_A_G
egfr Gene_EXP:MCTP2 4_99216165_A_T
egfr Gene_EXP:MICALL1 22_36566306_C_G
egfr Gene_EXP:MLKL 17_80137479_A_T
egfr Gene_EXP:MMRN2 19_15807367_G_T
egfr Gene_EXP:MPHOSPH9 14_104949986_T_C
egfr Gene_EXP:MPP1 7_114663562_CT_C,9_33796659_C_T,9_33798019_A_G
egfr Gene_EXP:MYT1 2_217847583_C_T,2_217847883_G_A,2_217848003_A_G
egfr Gene_EXP:MZT1 10_31363289_T_C
egfr Gene_EXP:NCAPD3 17_8881770_A_C,17_8881775_C_T
egfr Gene_EXP:NR2F6 1_231795302_T_C,2_97167816_C_T,7_144232341_G_C,17_81460232_G_A,19_51014792_C_T
egfr Gene_EXP:NUDC 18_24064127_G_T
egfr Gene_EXP:OTUD1 3_128992964_T_G
egfr Gene_EXP:OVOL1 15_22608045_C_A
egfr Gene_EXP:P2RY2 5_169294_T_C,17_60211184_A_G
egfr Gene_EXP:P2RY6 2_71398637_G_A,2_71399439_CTA_C,2_71418498_G_GT,2_71424561_G_GT
egfr Gene_EXP:PAICS 19_50637249_G_A
egfr Gene_EXP:PARP12 22_36566306_C_G
egfr Gene_EXP:PARP9 4_185267219_TA_T
egfr Gene_EXP:PBX3 5_19503134_C_A,9_17273880_A_G,9_33062185_G_GA
egfr Gene_EXP:PCSK1N 15_74801109_A_C
egfr Gene_EXP:PDLIM1 11_124186080_G_A,11_124224942_C_A
egfr Gene_EXP:PDP1 4_87811722_A_G,15_25189495_C_T,15_25189608_A_G,15_25199636_G_A
egfr Gene_EXP:PEX13 10_98209718_A_C,10_98236016_C_T,10_98253681_C_T
egfr Gene_EXP:PIAS2 18_49837560_A_G,18_49837561_G_C
egfr Gene_EXP:PITPNM3 6_42916173_G_C
egfr Gene_EXP:PLD2 15_84407910_G_A
egfr Gene_EXP:PLEKHA1 16_89546571_ACC_AC
egfr Gene_EXP:PLP2 16_24862746_A_C
egfr Gene_EXP:PNPLA6 11_122808020_A_G,14_92651884_C_T,16_14764032_A_G
egfr Gene_EXP:PPP1R13L 7_33099535_G_A
egfr Gene_EXP:PPP1R14C 7_64336444_AT_A
egfr Gene_EXP:PPP1R14C 12_27658716_G_T
egfr Gene_EXP:PRAF2 16_14764032_A_G,16_46710765_T_A,16_54284260_C_A
egfr Gene_EXP:PRDM15 5_181333681_C_T
egfr Gene_EXP:PRSS8 18_77066283_A_G,18_77066289_G_A
egfr Gene_EXP:PTAFR 9_132827103_T_C
egfr Gene_EXP:PTBP3 11_89798633_CA_C
egfr Gene_EXP:PTGFRN 5_126804830_T_C,5_126836282_C_T,11_1250937_C_T
egfr Gene_EXP:PTGS2 11_86556636_G_A,11_86559642_C_T
egfr Gene_EXP:PTP4A3 X_92201459_T_G
egfr Gene_EXP:PTPRO 1_169725777_A_G,1_169727805_G_A
egfr Gene_EXP:PYHIN1 18_63399230_A_G
egfr Gene_EXP:RAB2B 15_20251568_G_A
egfr Gene_EXP:RASEF 2_11596179_G_A,2_131600094_A_G
egfr Gene_EXP:RHBDL2 5_100389692_A_C,5_150068208_G_A
egfr Gene_EXP:RHOV 1_1971961_T_G
egfr Gene_EXP:RIC8B 3_39412024_A_G
egfr Gene_EXP:RNF208 4_7815971_GT_G,19_11832898_G_A
egfr Gene_EXP:RNFT2 22_36566306_C_G
egfr Gene_EXP:ROR2 6_6305225_G_C,13_44436731_C_T
egfr Gene_EXP:RUNX1 9_33796659_C_T,9_33796705_C_G
egfr Gene_EXP:RXRA 15_30087620_G_A,15_32400109_G_A
egfr Gene_EXP:S100A11 11_124145287_C_T
egfr Gene_EXP:S100A7 15_80159671_C_T
egfr Gene_EXP:S100A8 19_7746529_A_C
egfr Gene_EXP:SDC1 14_70246869_T_G
egfr Gene_EXP:SEC61G 19_2073455_A_C
egfr Gene_EXP:SERINC3 2_25980839_T_G
egfr Gene_EXP:SERPINB13 6_43139226_A_C,20_32917383_C_T,20_32930492_A_G,20_32983679_C_T
egfr Gene_EXP:SERPINB5 22_50625559_G_C
egfr Gene_EXP:SFXN3 10_68691523_T_C
egfr Gene_EXP:SGCB 8_105802428_G_C,12_50109486_C_T
egfr Gene_EXP:SGTB 10_98209718_A_C,10_98236016_C_T,10_98253681_C_T
egfr Gene_EXP:SH2D3A 6_129475475_C_T
egfr Gene_EXP:SLC15A2 2_174801578_A_G
egfr Gene_EXP:SLC37A2 6_70302872_T_C
egfr Gene_EXP:SLC9A3R1 15_75783322_C_G
egfr Gene_EXP:SNAP25 2_71424561_G_GT
egfr Gene_EXP:SOX15 18_12840880_T_C
egfr Gene_EXP:SPAG1 3_151328520_G_A,17_50192542_A_G
egfr Gene_EXP:SSH3 3_7680310_G_A
egfr Gene_EXP:ST18 10_133626012_T_A,10_133626013_G_A
egfr Gene_EXP:ST6GALNAC2 4_54263987_G_A,6_31666781_A_G,6_136659286_G_A,6_150945502_T_G
egfr Gene_EXP:STRA13 12_878316_G_A
egfr Gene_EXP:SYNC 15_42142087_A_C
egfr Gene_EXP:TEAD3 18_166710_TTAAAA_T,18_166819_T_C,18_264012_G_A
egfr Gene_EXP:TEX30 10_31363289_T_C
egfr Gene_EXP:THBS1 15_65447029_G_A
egfr Gene_EXP:TIGD3 5_135888024_G_T
egfr Gene_EXP:TMPRSS15 21_39898596_C_A
egfr Gene_EXP:TMPRSS4 11_18484085_G_A
egfr Gene_EXP:TNFAIP8 17_16624481_C_A
egfr Gene_EXP:TNNT3 2_226796327_T_C
egfr Gene_EXP:TP63 20_32983679_C_T
egfr Gene_EXP:TRAF4 10_128101658_T_C
egfr Gene_EXP:TRIM21 18_50806833_C_G
egfr Gene_EXP:TRIM29 11_45181661_C_T,20_32983679_C_T
egfr Gene_EXP:TRIP6 17_78529677_G_C
egfr Gene_EXP:TSR2 8_109271027_T_C,8_109271124_T_G
egfr Gene_EXP:TTC3 12_66128870_G_A
egfr Gene_EXP:UBAP1 5_31510999_G_T
egfr Gene_EXP:UBASH3B 14_68477626_CT_C
egfr Gene_EXP:UFM1 8_7811967_A_G
egfr Gene_EXP:VIM 16_14764032_A_G
egfr Gene_EXP:VTI1B 2_225401003_CTGG_C
egfr Gene_EXP:WDR85 17_6755950_T_G
egfr Gene_EXP:WNT10A 6_129475475_C_T
egfr Gene_EXP:ZEB1 3_58285236_T_C,9_41905830_C_G
egfr Gene_EXP:ZFP82 3_33120406_C_T
egfr Gene_EXP:ZNF546 14_23360749_G_A,14_65267030_C_T,14_92651884_C_T
egfr Gene_EXP:ZNF750 19_15794719_C_A,19_15807367_G_T
[표 19]에 제시된 FRH 들이 해당 유전자(gene) 발현과의 상관도(P-value) 및 약물과의 상관도(P-value)를 산출한 결과가 아래 [표 20]에 정리되어있다.
또한, [표 19]에 제시된 FRH들이 포함되어 발현된 유전자들 중 주요 유전자와 각각의 EGFR 약물과의 상관도(P-value)를 산출한 결과가 도 33에 도시되어 있다.
이들 [표 20] 및 [도 33]로부터 [표 20] 및 [도 33]에 공통적으로 낮은 P-value값을 갖는 유전자(gene)에 포함된 FRH(s)가 EGFR 약물 반응성을 판단하기 위한 바이오마커로 실효성이 높은 것으로 판단할 수 있다.
DrugPathway GENE Variants Var _Drug( pval ) Var _ Exp ( Pval )
egfr CWC27_1 chr5_64977191_G_A 2.20E-08 0.002090721
egfr RNF217_1 chr6_125082793_A_C 3.96E-08 0.0374208
egfr PTGR1_1 chr9_111597344_C_A 8.25E-08 2.15E-05
egfr NTN4_1 chr12_95738117_A_G 1.53E-07 0.019702457
egfr ZNF276_1 chr16_89737928_T_C 1.72E-07 0.019670045
egfr THBS1_1 chr15_39587486_A_C 2.59E-07 0.031233094
egfr TRIM29_1 chr11_120115474_C_A 3.52E-07 0.011023929
egfr APBB1_1 chr11_6401118_A_C 7.48E-07 0.04449344
egfr RASA3_1 chr13_113981629_G_A 1.35E-06 0.009453296
egfr TMX3_1 chr18_68700489_TA_T 1.39E-06 0.003224589
egfr RRP1_1 chr21_43791417_C_A 1.65E-06 0.034182877
egfr SIT1_1 chr9_35650461_G_A 1.75E-06 0.019947873
egfr FRG1_1 chr4_189955114_T_C 2.25E-06 0.018901776
egfr GTF2IRD1_1 chr7_74512993_A_G 3.54E-06 0.006481631
egfr DCP1A_1 chr3_53342054_G_C 4.78E-06 0.003471409
egfr SNRNP70_1 chr19_49101556_A_C 5.20E-06 0.016599779
egfr DDX20_1 chr1_111756207_T_C 5.26E-06 0.008003234
egfr TJP2_1 chr9_69237088_T_C 5.58E-06 0.04386431
egfr RHOJ_1 chr14_63269236_T_G 6.18E-06 0.027885215
egfr CXCL2_1 chr4_74098975_A_C 7.13E-06 0.000838562
egfr CARD8_1 chr19_48212012_T_C 9.03E-06 0.00020501
egfr TRMT2A_1 chr22_20117296_A_C 9.03E-06 0.048556634
egfr CRIM1_1 chr2_36479368_G_C 9.53E-06 0.012444715
egfr ELF3_1 chr1_202010991_C_G 9.65E-06 0.017391595
egfr UHRF2_1 chr9_6482002_G_T 1.20E-05 0.007025127
egfr HDHD2_1 chr18_47115026_C_T 1.42E-05 1.48E-06
egfr ZBTB17_1 chr1_15944765_G_A 1.47E-05 0.010171388
egfr THRB_1 chr3_24143504_G_A 1.80E-05 0.026515077
egfr DHRS3_1 chr1_12568430_G_A 1.81E-05 0.043238329
egfr AGTPBP1_1 chr9_85672687_TA_T 1.94E-05 0.017580094
egfr DMTF1_1 chr7_87166631_TAG_T 1.97E-05 0.010040428
egfr CTBP2_1 chr10_124993226_T_G 2.02E-05 0.022707139
egfr BLK_1 chr8_11543171_G_A 2.24E-05 0.01145612
egfr EPCAM_1 chr2_47373742_AT_A 2.57E-05 0.033377716
egfr JUN_1 chr1_58782229_T_C 2.65E-05 0.037758558
egfr RBM5_1 chr3_50114164_G_T 2.77E-05 0.00111984
egfr CDKN2AIP_1 chr4_183445476_T_TGCACA 2.77E-05 0.002734488
egfr ZCCHC7_1 chr9_37302158_C_T 2.93E-05 0.022389727
egfr RAB8B_1 chr15_63262625_GTA_G 2.96E-05 0.020562837
egfr ODC1_1 chr2_10444350_A_C 2.98E-05 0.031377929
egfr CLTB_1 chr5_176397682_T_C 3.11E-05 0.006127908
egfr UIMC1_1 chr5_176906125_C_T 3.66E-05 0.014840456
egfr HCST_1 chr19_35903545_A_C 3.71E-05 0.031562304
egfr HSPA1B_1 chr6_31828722_C_G 3.82E-05 0.018774385
egfr MYL12B_1 chr18_3261766_G_T 4.16E-05 0.002628021
egfr RHBDF1_1 chr16_63885_G_GCC 4.21E-05 0.04101508
egfr UBE2N_1 chr12_93411182_C_T 4.29E-05 1.51E-06
egfr SVIL_1 chr10_29524582_A_G 4.44E-05 0.010981597
egfr CCDC28B_1 chr1_32202026_A_C 4.45E-05 0.031117706
egfr ADARB1_1 chr21_45182568_CT_C 4.48E-05 0.049945862
egfr PPP4R1_1 chr18_9549876_A_G 5.09E-05 0.004893788
egfr CHD1L_1 chr1_147294440_C_G 5.10E-05 0.048656291
egfr LRP5_1 chr11_68424878_T_G 5.20E-05 0.010363624
egfr RND3_1 chr2_150487464_GA_G 5.77E-05 0.009852344
egfr LONRF1_1 chr8_12731670_C_A 5.98E-05 0.001411904
egfr BCOR_1 chrX_40052275_A_C 6.09E-05 0.000204144
egfr CCT8_1 chr21_29070160_C_T 6.54E-05 0.02571665
egfr ZNF330_1 chr4_141232702_CTT_C 8.61E-05 0.012329326
egfr CEP128_1 chr14_80916501_C_A 8.82E-05 0.001156052
egfr SH2D3A_1 chr19_6760997_A_G 9.99E-05 0.028745239
egfr IRF6_1 chr1_209790735_C_T 0.000103095 0.008136801
egfr ITGAL_1 chr16_30484175_C_T 0.000109049 0.037227837
egfr UEVLD_1 chr11_18558312_C_A 0.000112934 0.026771319
egfr RNF141_1 chr11_10530725_T_C 0.000116417 0.011923468
egfr THRAP3_1 chr1_36288866_G_C 0.000117571 0.000131738
egfr PIAS4_1 chr19_4028785_C_T 0.000120052 0.024864531
egfr SLC22A5_1 chr5_132390655_C_A 0.000123083 0.004292176
egfr JAG1_1 chr20_10648877_T_C 0.00012714 0.02148436
egfr SPI1_1 chr11_47358510_A_C 0.000133865 0.03491009
egfr TECPR1_1 chr7_98223587_A_G 0.000136841 0.023100583
egfr ZC3HC1_1 chr7_130023656_C_T 0.000136956 0.010175357
egfr PDGFA_1 chr7_518698_G_C 0.000139135 0.000252407
egfr C16orf74_1 chr16_85741569_G_A 0.000148491 0.001823033
egfr DOT1L_1 chr19_2226677_G_A 0.00015451 0.006191812
egfr CD19_1 chr16_28937656_A_C 0.000155088 0.031114669
egfr P2RY2_1 chr11_73235099_G_C 0.000158117 0.045669577
egfr EHF_1 chr11_34661000_T_C 0.000158117 0.017992198
egfr EPS15L1_1 chr19_16392488_A_C 0.000158117 0.033272384
egfr AGTRAP_1 chr1_11750007_T_G 0.000159275 0.049159238
egfr LYRM7_1 chr5_131199511_CT_C 0.000164473 0.021278948
egfr EPAS1_1 chr2_46346944_T_G 0.000170063 0.018667654
egfr SIX4_1 chr14_60713618_C_T 0.000180476 0.049844478
egfr PROM2_1 chr2_95281185_T_G 0.000190311 0.033838771
egfr CAPN1_1 chr11_65186241_T_G 0.000194914 0.02936405
egfr SRRM1_1 chr1_24669380_C_A 0.000202713 0.019718891
egfr KLF3_1 chr4_38689006_A_C 0.000228896 0.015121455
egfr THSD4_1 chr15_71765130_A_C 0.000239788 1.95E-06
egfr GPR107_1 chr9_130129853_A_G 0.000243505 0.033022802
egfr TCERG1_1 chr5_146471685_A_C 0.000246294 0.042046343
egfr ATG4C_1 chr1_62805167_G_T 0.000259178 0.028589986
egfr SHQ1_1 chr3_72750552_C_T 0.000259737 0.005940284
egfr DSG2_1 chr18_31524751_A_G 0.000261765 0.009944093
egfr S100A14_1 chr1_153615226_C_T 0.000274681 0.01787459
egfr CLDN4_1 chr7_73830773_C_T 0.000293995 0.000682466
egfr OVOL2_1 chr20_18041767_A_G 0.000295117 0.047118131
egfr CREB1_1 chr2_207577759_AT_A 0.00029854 0.000463006
egfr BCLAF1_1 chr6_136278266_T_C 0.000301864 6.60E-05
egfr PKP2_1 chr12_32791480_G_T 0.000343509 0.006486331
egfr ADAM9_1 chr8_39082624_ATTT_A 0.000344695 0.022961
egfr POLA1_1 chrX_24743203_T_G 0.000351661 0.028975018
egfr FBXO10_1 chr9_37537560_G_A 0.000376887 0.024540631
egfr CHMP4B_1 chr20_33811394_C_G 0.000388769 0.00409862
egfr NOP56_1 chr20_2657708_GT_G 0.000405654 0.000313483
egfr WIPF1_1 chr2_174585550_T_G 0.000407518 0.000483959
egfr SCNN1A_1 chr12_6349108_G_C 0.00042455 0.003465155
egfr C11orf80_1 chr11_66828178_C_T 0.000427492 0.010017428
egfr ERP27_1 chr12_14914577_T_TGTGC 0.000433389 0.018734323
egfr JAG2_1 chr14_105151295_T_G 0.000452695 0.00756224
egfr SMARCC1_1 chr3_47693210_A_G 0.00046021 6.92E-05
egfr RNF138_1 chr18_32123591_T_C 0.000469129 0.018606829
egfr THYN1_1 chr11_134248640_G_T 0.000477172 0.042214253
egfr CYP24A1_1 chr20_54164725_T_C 0.000480706 0.013922674
egfr SH2D3C_1 chr9_127766923_A_C 0.000489816 0.042455713
egfr TGFA_1 chr2_70453242_T_G 0.000497539 0.011508647
egfr CXCL16_1 chr17_4738773_T_G 0.000507631 0.000457547
egfr AEN_1 chr15_88629905_A_C 0.000523617 0.014580971
egfr SLC37A1_1 chr21_42534616_T_G 0.00054592 0.025393921
egfr EPHA2_1 chr1_16148437_A_C 0.000564393 0.003022958
egfr BCS1L_1 chr2_218660859_A_G 0.000567546 0.011564609
egfr FBXO43_1 chr8_100137711_G_C 0.000602338 0.026281824
egfr ADAM22_1 chr7_88075657_C_T 0.000632153 0.041287227
egfr ADAMTSL1_1 chr9_18636052_G_T 0.000649915 0.010200615
egfr ATXN2L_1 chr16_28834263_C_T 0.000652099 0.023519932
egfr ZCCHC4_1 chr4_25313024_A_C 0.000669769 0.022993547
egfr BCL2_1 chr18_63318646_T_C 0.000676626 0.021320439
egfr EGR1_1 chr5_138466811_A_C 0.000686817 0.000273933
egfr HS3ST1_1 chr4_11399218_T_C 0.000704542 0.027639734
egfr LEF1_1 chr4_108078210_G_A 0.000716837 0.012727304
egfr SRSF7_1 chr2_38748190_GT_G 0.000734347 0.005863144
egfr KHSRP_1 chr19_6415784_T_C 0.000787917 0.003576751
egfr YPEL1_1 chr22_21704297_T_C 0.000796764 0.006311112
egfr TAPT1_1 chr4_16162866_G_A 0.000802167 0.000763967
egfr SNRK_1 chr3_43348277_C_T 0.000817875 0.00952899
egfr UGCG_1 chr9_111932206_A_G 0.000846657 0.012775358
egfr DBF4B_1 chr17_44709262_G_C 0.000856709 0.025236345
egfr HOOK1_1 chr1_59860373_C_G 0.000856894 0.041888498
egfr ITGB3BP_1 chr1_63572436_G_T 0.000871324 0.023830002
egfr DTX4_1 chr11_59205028_T_C 0.000886385 0.025332013
egfr PPP1R13L_1 chr19_45391868_T_C 0.000894105 0.005877508
egfr CBLC_1 chr19_44790103_A_C 0.000937082 0.025305244
egfr B4GALT4_1 chr3_119212822_G_T 0.000987069 8.97E-06
egfr HSBP1_1 chr16_83809462_C_T 0.000990234 0.008673739
egfr DTX1_1 chr12_113093500_A_T 0.001029524 0.02107386
egfr TMEM51_1 chr1_15219789_A_C 0.001061315 0.004570596
egfr ASAP2_1 chr2_9388476_A_C 0.001065564 0.013740425
egfr PPP2R3C_1 chr14_35096667_C_A 0.001070573 0.008848084
egfr WWC2_1 chr4_183280995_G_T 0.001131955 0.017164588
egfr DMKN_1 chr19_35505819_C_T 0.001187435 0.023762682
egfr EPHX1_1 chr1_225838589_T_G 0.001193048 0.015600736
egfr PRPF4B_1 chr6_4051933_C_A 0.001231599 0.023843897
egfr SNRNP40_1 chr1_31267793_A_G 0.001239539 0.0334327
egfr LTBP3_1 chr11_65543062_T_C 0.00124246 0.027887632
egfr BAG3_1 chr10_119651803_A_C 0.001254787 0.031179453
egfr ANKRD2_1 chr10_97572685_T_G 0.001261251 0.014732168
egfr ZNF451_1 chr6_57147971_C_A 0.001263762 0.000340137
egfr ME2_1 chr18_50920583_C_T 0.00130336 2.53E-06
egfr DLG5_1 chr10_77811963_T_G 0.001305738 0.016910687
egfr USP19_1 chr3_49111457_T_C 0.001383111 0.008511689
egfr PDCD11_1 chr10_103433899_A_G 0.001419074 0.023046171
egfr PDE1B_1 chr12_54577030_T_G 0.0014774 0.000907902
egfr LONP1_1 chr19_5707040_C_G 0.001478061 0.014919269
egfr KCNN3_1 chr1_154733143_A_C 0.001483801 0.012755172
egfr FSD1_1 chr19_4304543_G_C 0.001495716 0.036857163
egfr F2RL1_1 chr5_76832874_T_G 0.001535054 0.000269192
egfr XPO4_1 chr13_20787374_T_C 0.001546207 0.044182604
egfr TM4SF1_1 chr3_149375342_T_G 0.001551483 0.005766355
egfr NPAS1_1 chr19_47035965_T_G 0.001567313 0.037858765
egfr FAM78A_1 chr9_131260861_G_A 0.001574494 0.029873205
egfr SYTL2_1 chr11_85734802_A_C 0.001576085 0.007792297
egfr TMEM57_1 chr1_25431052_T_G 0.001577095 0.001041181
egfr TUBA1A_1 chr12_49186397_T_C 0.001584541 0.019746043
egfr ITPR3_1 chr6_33692820_C_T 0.001625448 0.001333145
egfr ATM_1 chr11_108317650_T_C 0.001633198 0.007926126
egfr SGTA_1 chr19_2769109_A_C 0.001653712 0.041785185
egfr LCORL_1 chr4_17883673_A_AAC 0.001662772 0.000314326
egfr MTDH_1 chr8_97660911_G_GATA 0.001694886 0.048360283
egfr IKBKB_1 chr8_42320656_T_C 0.00170984 2.52E-05
egfr HNRNPD_1 chr4_82355277_C_CA 0.001737277 0.049911299
egfr RAX_1 chr18_59272671_A_C 0.001739655 0.028250861
egfr ZNF775_1 chr7_150397902_A_C 0.001751147 0.01910485
egfr ALDH1A3_1 chr15_100885169_T_G 0.001758148 0.04003907
egfr GNAI2_1 chr3_50252193_A_C 0.001785905 0.005183043
egfr ZNF740_1 chr12_53187645_C_G 0.001788461 0.049202233
egfr NTM_1 chr11_132307846_G_T 0.001796239 0.000193861
egfr CHN1_1 chr2_174801578_A_G 0.001797358 0.038050415
egfr PAX5_1 chr9_36923611_G_A 0.001934236 0.014759026
egfr VAMP3_1 chr1_7781489_A_C 0.00200626 0.040313352
egfr STK4_1 chr20_44995009_C_T 0.002049488 5.24E-05
egfr USP24_1 chr1_55075675_C_A 0.002073268 0.008980628
egfr EXOSC10_1 chr1_11080567_C_A 0.002083377 0.019692529
egfr TINAGL1_1 chr1_31585380_T_G 0.002085646 0.037138102
egfr SPTLC3_1 chr20_13093456_G_T 0.002145546 0.024467108
egfr PLEKHA6_1 chr1_204257921_A_C 0.002162143 0.049362899
egfr PLXNC1_1 chr12_94219931_T_G 0.002163508 0.043558201
egfr CAPN2_1 chr1_223717830_G_A 0.0022465 0.020893773
egfr TJP1_1 chr15_29718124_TA_T 0.002277416 0.026903818
egfr ASPHD2_1 chr22_26442326_G_A 0.002296851 0.029916144
egfr IFT43_1 chr14_76082206_T_G 0.002305612 0.012552105
egfr CASK_1 chrX_41578463_T_G 0.002309184 0.043343775
egfr C21orf33_1 chr21_44144829_C_T 0.002316139 0.047114252
egfr AFAP1L2_1 chr10_114294856_CCTAA_C 0.00232372 0.037962739
egfr MEI1_1 chr22_41699656_A_C 0.002354824 0.019192604
egfr HAUS6_1 chr9_19080551_G_A 0.002357763 0.027262757
egfr LRRC8E_1 chr19_7899842_G_A 0.002381607 0.011668019
egfr SMARCB1_1 chr22_23787366_GGC_G 0.002396307 0.000127894
egfr DUT_1 chr15_48332272_A_C 0.002405318 0.00018263
egfr MON1A_1 chr3_49911902_A_G 0.002439566 0.010543368
egfr SASH1_1 chr6_148440274_CT_C 0.002448515 0.046157021
egfr MAP1S_1 chr19_17726640_A_C 0.002527497 0.022464441
egfr TOE1_1 chr1_45340381_G_A 0.002528538 0.048016234
egfr CNOT7_1 chr8_17242848_C_T 0.002530932 7.40E-11
egfr CD244_1 chr1_160836124_G_A 0.002583957 0.026316972
egfr EPM2AIP1_1 chr3_36992730_A_C 0.002610713 0.00113706
egfr PRSS16_1 chr6_27249457_C_T 0.002649855 0.041003068
egfr GPSM3_1 chr6_32192179_T_C 0.002655487 0.017253689
egfr UGDH_1 chr4_39527132_G_A 0.002672816 0.035973223
egfr AIG1_1 chr6_143060973_T_C 0.002697343 0.001184612
egfr PMS1_1 chr2_189864380_G_A 0.002709035 0.028805775
egfr PTGFR_1 chr1_78497752_G_A 0.002814073 0.008690688
egfr AGPAT2_1 chr9_136674614_A_G 0.002858165 0.022967509
egfr CBL_1 chr11_119278299_T_G 0.002995636 0.015544213
egfr RAB37_1 chr17_74694690_G_A 0.003050869 0.017656336
egfr GTPBP3_1 chr19_17338111_A_C 0.003059974 0.000709713
egfr HDAC4_1 chr2_239053232_A_C 0.003067942 0.036469606
egfr MBD3_1 chr19_1577118_C_T 0.003069952 0.001822739
egfr CEP170_1 chr1_243164906_G_A 0.003157617 0.005533907
egfr S100A16_1 chr1_153607964_A_G 0.003160582 0.026054854
egfr DCK_1 chr4_71022615_CT_C 0.003222902 0.021365647
egfr INF2_1 chr14_104713013_A_C 0.003224544 0.022440089
egfr MYO6_1 chr6_75870526_T_C 0.003249199 0.022167818
egfr CDS1_1 chr4_84635369_T_A 0.003299427 0.032630939
egfr CTDSPL_1 chr3_37980672_C_T 0.003333659 0.043268165
egfr EPB41L1_1 chr20_36187855_G_T 0.003410098 0.042407864
egfr FGR_1 chr1_27617489_T_A 0.003443717 0.014581374
egfr CAPRIN1_1 chr11_34051813_A_G 0.003553009 0.001206062
egfr FOXC1_1 chr6_1612184_TA_T 0.00358795 0.004712911
egfr ARHGEF6_1 chrX_136685627_G_A 0.003598733 0.001837929
egfr BCAR3_1 chr1_93674923_G_C 0.003606528 0.049870881
egfr BCL9L_1 chr11_118897861_A_C 0.003681075 0.034238861
egfr TMEM201_1 chr1_9610425_T_A 0.003707837 0.025977963
egfr RPS11_1 chr19_49496985_C_T 0.003720736 0.048243831
egfr GMEB1_1 chr1_28690201_G_T 0.003734863 0.005247117
egfr XRCC5_1 chr2_216109182_G_C 0.00380529 0.019360584
egfr IL13RA1_1 chrX_118776541_G_T 0.003874528 0.009303333
egfr PRR14_1 chr16_30651924_T_G 0.003882844 0.041861928
egfr SH2B3_1 chr12_111418260_C_G 0.003991404 0.00753988
egfr DTNBP1_1 chr6_15662698_A_G 0.00400197 0.006306033
egfr PADI1_1 chr1_17228910_T_G 0.004006843 0.013302935
egfr FAF1_1 chr1_50787989_A_G 0.004030148 0.030848308
egfr RAB11FIP5_1 chr2_73075763_G_GGCCT 0.004085081 0.024778824
egfr ZBTB40_1 chr1_22508509_T_G 0.004115308 0.00741291
egfr BLCAP_1 chr20_37517746_T_C 0.004121218 0.011965638
egfr KIF2A_1 chr5_62373627_T_G 0.004150384 0.036674489
egfr HCFC1_1 chrX_153963207_T_G 0.004154957 0.001579155
egfr HINFP_1 chr11_119121467_T_C 0.004250524 0.04539997
egfr PRDM2_1 chr1_13823349_T_A 0.004303676 0.011003429
egfr EIF4E_1 chr4_98902074_AT_A 0.004333629 0.008214508
egfr PARVG_1 chr22_44206294_C_G 0.004424 0.028583204
egfr COX18_1 chr4_73064835_G_A 0.004489575 0.009081073
egfr WDR33_1 chr2_127701640_C_G 0.004497758 0.006721664
egfr ARHGAP9_1 chr12_57474460_G_A 0.004523019 0.041357487
egfr GGCX_1 chr2_85550432_A_G 0.004614743 0.015128917
egfr ZNF182_1 chrX_47983350_T_G 0.004661316 0.045101518
egfr ANXA6_1 chr5_151117292_C_T 0.004727288 0.038173193
egfr RPL14_1 chr3_40457950_G_A 0.004955666 0.001218496
egfr FCHO2_1 chr5_73082876_ATT_A 0.004962427 0.029256929
egfr RAB28_1 chr4_13473790_TATC_T 0.004968595 0.040901005
egfr RNGTT_1 chr6_88769645_C_T 0.00502562 0.002545266
egfr NNT_1 chr5_43602611_T_C 0.005081886 0.030151517
egfr CLDN1_1 chr3_190308594_C_T 0.005105908 0.019956392
egfr NRN1_1 chr6_6003752_C_T 0.005133833 0.006175355
egfr ZNF423_1 chr16_49635837_A_C 0.005155281 0.015077717
egfr YES1_1 chr18_732727_A_G 0.00519113 0.026256279
egfr RAPGEF6_1 chr5_131433731_GA_G 0.005213959 0.0053626
egfr MGAT4B_1 chr5_179799918_A_G 0.005262946 0.044186289
egfr GATAD2B_1 chr1_153818250_T_C 0.005279052 0.026743921
egfr FCRL5_1 chr1_157518564_T_C 0.005397526 0.023539142
egfr ACSS2_1 chr20_34925819_A_C 0.00560253 0.016776881
egfr CTR9_1 chr11_10773884_CAAAAA_C 0.005625384 0.03664895
egfr INPP5B_1 chr1_37872885_G_T 0.005738649 0.010365859
egfr RPAIN_1 chr17_5421266_TTC_T 0.005740177 0.041469888
egfr RCHY1_1 chr4_75509142_T_A 0.00575286 7.00E-06
egfr RASSF7_1 chr11_562335_A_C 0.005935904 0.018138357
egfr NKX3-2_1 chr4_13541263_A_G 0.00596504 0.000419444
egfr IGFBP3_1 chr7_45917562_GT_G 0.006141827 0.045400401
egfr LTBR_1 chr12_6385217_T_C 0.006192879 9.81E-05
egfr GNG2_1 chr14_51950694_A_C 0.006226032 0.02637487
egfr NAP1L1_1 chr12_76084896_T_C 0.006264126 0.018182577
egfr GULP1_1 chr2_188589974_C_CT 0.006362476 0.004507263
egfr PXDC1_1 chr6_3727577_C_G 0.006364895 0.027367829
egfr WDR12_1 chr2_202897546_T_A 0.006402216 0.044170968
egfr TMBIM6_1 chr12_49742405_G_A 0.006435087 0.019471463
egfr PPM1D_1 chr17_60656452_CA_C 0.006580355 0.01692061
egfr RPA2_1 chr1_27907061_GA_G 0.006586873 0.02798096
egfr PRR3_1 chr6_30562126_T_G 0.006592704 0.005676599
egfr RBM28_1 chr7_128310614_C_A 0.006924451 0.019795754
egfr ENAH_1 chr1_225519569_GAAAA_G 0.007036997 0.048924277
egfr KIAA0922_1 chr4_153592379_A_G 0.0070597 0.048688528
egfr TRIM2_1 chr4_153276097_A_G 0.007183471 0.011894098
egfr ATP8B1_1 chr18_57731374_T_C 0.007320467 0.035819404
egfr QSOX1_1 chr1_180178802_A_G 0.007420273 0.008203943
egfr MB_1 chr22_35607296_C_G 0.007592955 0.045421658
egfr ORAI2_1 chr7_102433548_G_A 0.007786599 0.035889292
egfr WNT7B_1 chr22_45931386_G_A 0.007831858 0.025701725
egfr PIKFYVE_1 chr2_208330748_GT_G 0.007852983 0.009816454
egfr ARHGAP32_1 chr11_128972609_T_G 0.007895267 0.007875634
egfr SH3YL1_1 chr2_249571_C_T 0.007939764 0.043096755
egfr DEPDC5_1 chr22_31843912_CT_C 0.00801665 0.025230811
egfr VSIG10_1 chr12_118073908_T_G 0.008024404 0.001976122
egfr SLX4_1 chr16_3595722_A_C 0.008031231 0.013087513
egfr REEP3_1 chr10_63621980_A_G 0.008035335 0.03021965
egfr FARSB_1 chr2_222571709_T_C 0.00812224 0.037339824
egfr NDUFS3_1 chr11_47578800_A_G 0.00843631 0.008511324
egfr HIBADH_1 chr7_27538786_G_A 0.008437431 0.025866827
egfr SCLT1_1 chr4_128957191_A_C 0.008485976 0.015508556
egfr SLC20A2_1 chr8_42439475_C_T 0.008560526 0.001296999
egfr LMO7_1 chr13_75855483_C_A 0.008616687 0.000790188
egfr SREBF2_1 chr22_41897136_G_C 0.008665061 0.031235978
egfr SPAG1_1 chr8_100194395_C_A 0.008766072 0.025833604
egfr NCAM1_1 chr11_113270137_A_G 0.008796809 0.040540565
egfr ATP1B1_1 chr1_169111407_C_G 0.008822814 0.015890801
egfr PLXNB2_1 chr22_50281752_C_G 0.008850507 0.048268974
egfr PFAS_1 chr17_8269414_A_G 0.008856682 0.026137416
egfr CEP152_1 chr15_48762574_G_C 0.008866418 0.044026406
egfr GNRH1_1 chr8_25423267_A_G 0.009056061 0.039449902
egfr CARD10_1 chr22_37508612_T_C 0.009110799 0.021324272
egfr COL6A3_1 chr2_237351090_T_G 0.00914922 0.009459532
egfr RBM12B_1 chr8_93733158_G_T 0.009183374 0.012443278
egfr ITPKC_1 chr19_40737666_A_C 0.009205546 0.045257656
egfr ARHGAP31_1 chr3_119390922_C_T 0.009221747 0.042725387
egfr GRAMD1A_1 chr19_35022992_C_T 0.00930255 0.030347265
egfr SAE1_1 chr19_47131056_T_G 0.009443122 0.006083296
egfr MICALL1_1 chr22_37924607_T_G 0.009460572 0.025017274
egfr GABRB2_1 chr5_161336809_G_A 0.009484795 0.019276169
egfr SPINT2_1 chr19_38287977_A_G 0.009500965 0.018521267
egfr ATXN7_1 chr3_63990247_A_C 0.009623217 5.97E-05
egfr TATDN2_1 chr3_10248824_C_CT 0.009659313 0.000116552
egfr AP4E1_1 chr15_50968319_T_G 0.009752147 0.046599506
egfr CHST2_1 chr3_143121243_A_G 0.009892538 0.040099833
egfr PRKAG2_1 chr7_151560579_A_G 0.009896448 0.024618763
egfr C16orf45_1 chr16_15596596_T_G 0.009927037 0.04351851
egfr SULT2B1_1 chr19_48591514_T_G 0.009943382 0.006727275
egfr DSTN_1 chr20_17600864_A_G 0.009947784 0.000427203
egfr TPD52L2_1 chr20_63889961_A_C 0.010191021 0.005896198
egfr E2F2_1 chr1_23521217_C_G 0.010495212 0.008957912
egfr TSEN34_1 chr19_54192354_T_G 0.010854598 0.001848481
egfr FOXN3_1 chr14_89162512_A_C 0.011014558 0.001249668
egfr MND1_1 chr4_153408912_G_GTATATA 0.011263008 0.006400349
egfr ZDHHC5_1 chr11_57696028_T_C 0.01129582 0.000204877
egfr ARMCX4_1 chrX_101488321_C_G 0.011422104 0.008157752
egfr P2RY11_1 chr19_10115376_G_A 0.011466091 0.000105991
egfr C1orf198_1 chr1_230839028_T_C 0.011890625 0.008759206
egfr TPTE2_1 chr13_19425773_G_A 0.011929579 0.00812417
egfr TMEM206_1 chr1_212379769_G_C 0.01195192 0.000739419
egfr REEP5_1 chr5_112891583_T_A 0.012573055 0.001996089
egfr CNNM4_1 chr2_96798981_T_G 0.012933399 0.000393837
egfr GPR65_1 chr14_88011069_C_T 0.013002947 0.005376071
egfr ZDHHC7_1 chr16_84981848_T_G 0.013133304 0.007398316
egfr KCNAB3_1 chr17_7925552_G_A 0.013376003 0.008474756
egfr ASNSD1_1 chr2_189670812_C_T 0.013663903 0.004106264
egfr LY9_1 chr1_160814485_A_C 0.014209114 0.004017681
egfr SKIV2L2_1 chr5_55307994_T_C 0.01489715 0.008290134
egfr MADD_1 chr11_47325027_T_C 0.01504914 0.001497343
egfr ITPRIPL1_1 chr2_96325641_T_G 0.0151793 0.004828474
egfr SDC4_1 chr20_45330303_T_G 0.015973482 0.000496261
egfr SLC2A8_1 chr9_127398490_G_A 0.016168742 0.003968261
egfr CSF2RB_1 chr22_36923285_A_C 0.016450302 0.008060727
egfr WWTR1_1 chr3_149669685_C_T 0.016674011 0.040303211
egfr PEX10_1 chr1_2410431_A_C 0.017756279 7.19E-05
egfr SCMH1_1 chr1_41033845_T_G 0.01786284 0.006455807
egfr WNT10A_1 chr2_218882471_A_C 0.018148757 0.008633339
egfr SIRT4_1 chr12_120303510_G_GAA 0.018478224 0.002426212
egfr SLC25A43_1 chrX_119451980_A_G 0.018546868 0.000927303
egfr SLC35F5_1 chr2_113723196_TA_T 0.019332514 0.009792442
egfr PLEKHA5_1 chr12_19369550_A_AAAAG 0.019740309 0.004535622
egfr RASEF_1 chr9_82982805_CAGAG_C 0.019798987 5.81E-06
egfr RASSF2_1 chr20_4797919_T_G 0.019937429 0.007153311
egfr ANKRD44_1 chr2_197099965_G_A 0.020081182 0.009634061
egfr ZFYVE19_1 chr15_40812591_A_AAG 0.020142634 0.000177529
egfr TMEM2_1 chr9_71704688_T_G 0.02064031 0.00528138
egfr TMEM159_1 chr16_21174063_G_A 0.020994925 0.001734513
egfr PEX13_1 chr2_61045783_A_T 0.021004523 0.005293964
egfr BCAR1_1 chr16_75229126_T_A 0.021029307 0.004775721
egfr SLC25A38_1 chr3_39389590_G_A 0.021402491 5.21E-05
egfr ING5_1 chr2_241711916_A_C 0.021779734 0.000297693
egfr AHR_1 chr7_17339074_A_C 0.021825994 0.009928124
egfr ETV1_1 chr7_13900838_A_C 0.022234699 0.00028392
egfr FUS_1 chr16_31191353_T_G 0.022580325 0.000527105
egfr ELMO1_1 chr7_36986095_A_C 0.022675843 0.000582138
egfr FLI1_1 chr11_128772826_T_G 0.022696029 2.10E-08
egfr RBPJ_1 chr4_26321137_C_A 0.023026755 0.005948758
egfr TGM1_1 chr14_24260894_A_C 0.023877255 4.06E-05
egfr MAD2L2_1 chr1_11680485_C_A 0.024343193 0.005401081
egfr CCDC66_1 chr3_56613771_T_C 0.024734355 0.00694013
egfr E2F3_1 chr6_20402547_A_C 0.024779926 0.001096854
egfr TRIM47_1 chr17_75875198_A_C 0.025043777 0.006990418
egfr LACTB2_1 chr8_70657773_A_C 0.025193805 0.000265188
egfr S100A13_1 chr1_153619154_A_C 0.026872567 0.000285894
egfr PRKCZ_1 chr1_2059508_T_G 0.027355157 0.000553783
egfr KIAA0430_1 chr16_15601202_A_G 0.027767771 0.008344755
egfr PARP1_1 chr1_226377365_T_C 0.028078591 0.000660394
egfr VMP1_1 chr17_59841357_A_C 0.028144116 0.00700708
egfr TRPM7_1 chr15_50619668_AT_A 0.028234282 0.007696192
egfr RPL11_1 chr1_23695353_C_A 0.028842665 0.006999268
egfr RHPN2_1 chr19_33002924_G_A 0.02894401 0.001694408
egfr MAST3_1 chr19_18107675_A_T 0.028979003 0.002887665
egfr SACS_1 chr13_23354711_A_C 0.029483838 0.007436264
egfr ZBTB4_1 chr17_7463332_C_G 0.030579241 0.009123992
egfr SSH3_1 chr11_67309455_A_C 0.031167208 0.006068708
egfr STAU1_1 chr20_49153934_T_C 0.031695969 0.047157357
egfr PRSS22_1 chr16_2853046_G_C 0.032478102 0.003660773
egfr SRRD_1 chr22_26488073_G_A 0.03313164 0.001986837
egfr ITGB8_1 chr7_20399120_C_G 0.033295835 0.000193939
egfr FLII_1 chr17_18245630_C_G 0.033989678 0.00994433
egfr TMEM40_1 chr3_12769284_C_T 0.034416268 0.003842868
egfr SLC19A1_1 chr21_45512453_A_C 0.034642487 0.009916208
egfr FBN1_1 chr15_48425289_G_T 0.035154355 0.007224526
egfr TMC4_1 chr19_54160564_G_A 0.03557474 0.008695606
egfr TACC2_1 chr10_122132454_G_A 0.036645036 7.09E-05
egfr HEATR5A_1 chr14_31315848_T_C 0.037815962 0.000583004
egfr SLC25A24_1 chr1_108161212_C_T 0.038139179 0.001625377
egfr TMEM39B_1 chr1_32091713_A_C 0.038513492 0.008701631
egfr ANKRD22_1 chr10_88831974_A_C 0.039475145 0.00796284
egfr SFSWAP_1 chr12_131753058_C_G 0.039748632 0.004289964
egfr C1orf54_1 chr1_150279750_G_C 0.039956255 0.001281485
egfr SEPT10_1 chr2_109564377_G_T 0.040053757 0.00487648
egfr FOS_1 chr14_75280999_A_C 0.04011469 0.001488063
egfr AARS2_1 chr6_44301927_CAGG_C 0.041166243 0.004966986
egfr EMP1_1 chr12_13211531_T_G 0.041461108 0.001600571
egfr FBXO2_1 chr1_11648995_C_G 0.042445462 0.005932397
egfr UBE3A_1 chr15_25408653_C_A 0.044428109 0.002080316
egfr GPC1_1 chr2_240451007_T_G 0.044965723 0.007919222
egfr ACTN4_1 chr19_38728028_T_G 0.045229843 0.005408687
egfr EPB41L4B_1 chr9_109182980_T_C 0.045378555 0.002429073
egfr SERTAD3_1 chr19_40441466_GGATC_G 0.045415799 0.001465832
egfr WHSC1L1_1 chr8_38315857_G_C 0.046096872 0.004506209
egfr QRICH1_1 chr3_49076524_TAAA_T 0.046339149 0.007356338
egfr CAMSAP3_1 chr19_7618018_A_C 0.046801001 0.000416732
egfr TCHP_1 chr12_109907472_T_G 0.047094137 0.003720466
egfr TUFT1_1 chr1_151565936_G_A 0.048675231 0.004559558
egfr CHMP1A_1 chr16_89649256_C_T 0.048695701 0.003804631
egfr LAMB2_1 chr3_49125146_T_G 0.049754671 0.002569959
egfr PNRC2_1 chr1_23961290_GCTT_G 0.049756672 0.006024417
egfr MARVELD2_1 chr5_69419733_A_C 0.049786079 0.007668831
egfr SLC22A18_3 chr11_2919250_T_G,chr11_2903361_G_A,chr11_2919268_T_G 0.00010006113410040524,0.0011537278855378685,0.03948380156101269 0.003253241739951185,0.009485355002003664,0.004588734004408302
egfr SH3D19_3 chr4_151148254_TACACACACACACACAC_T,chr4_151122202_T_C,chr4_151148202_G_T 0.00010065962678441032,0.015768562077467373,0.0009087951468125592 0.016052772944150497,0.00026537095134489047,0.004030165987762314
egfr LARS2_5 chr3_45474156_T_C,chr3_45476267_G_A,chr3_45488909_G_A,chr3_45500591_T_C,chr3_45417241_A_G 0.00010374784857743111,3.7424426310272928e-06,1.2434210249182578e-07,6.432927229497336e-08,0.004689576487598519 1.1453239774161183e-13,9.671821420877082e-13,6.257680298053254e-14,4.345853387032865e-14,0.022164736928693304
egfr SRGAP1_2 chr12_64142411_T_C,chr12_64097222_GTT_G 0.00010959539878441124,0.0011886231256692465 0.006505852651723906,0.02613509690642953
egfr ALDH3A1_3 chr17_19742310_G_A,chr17_19748298_C_T,chr17_19740913_C_G 0.00011241479007533596,0.0023838380538555946,0.026511359318080838 0.016065461057378518,0.04852415829065191,0.0007153928676742558
egfr LPIN3_5 chr20_41345676_A_G,chr20_41358461_T_G,chr20_41358465_C_G,chr20_41340873_C_A,chr20_41350009_T_G 0.00011710984250539265,0.000846270947552816,0.0063262440202536815,7.192100726008128e-05,0.033798727519866234 0.001902884670314011,5.712471333190794e-05,6.891802498643105e-05,0.025739865299148755,0.0036707505113827256
egfr LAMB3_3 chr1_209626885_C_T,chr1_209626996_C_T,chr1_209630438_C_T 0.00012286163323842149,0.0001560650413956853,0.00010264198687506551 0.014463355479842403,0.005725629984184445,0.0254414675884508
egfr RAC1_2 chr7_6398689_A_C,chr7_6401802_T_G 0.00012312607987750062,0.022378677686989437 0.0005959472772163739,0.003141262984465143
egfr CERKL_2 chr2_181603835_A_C,chr2_181678048_T_G 0.00012332912254087272,0.00048702996607960313 8.976196985876391e-05,0.010552400468127526
egfr MTO1_2 chr6_73492090_C_T,chr6_73473277_C_CAGAT 0.0001242869571724915,0.027975699490295474 0.0009500421967262693,0.0034299441619718607
egfr SUMF1_2 chr3_4419885_G_A,chr3_3846683_A_C 0.00013129129316308624,0.007888292383663753 0.017506933739797337,0.0026519652256760252
egfr WDFY4_5 chr10_48946696_T_C,chr10_48774557_A_C,chr10_48823427_C_T,chr10_48826590_T_A,chr10_48709976_C_T 0.00014298234740370438,7.877438075749654e-06,0.006750199117687904,0.008731995024502738,0.0057882693531272345 0.03553981554074815,0.02592605078891659,0.041159506689191376,0.03934434383747865,0.036092320181802036
egfr DSC2_3 chr18_31091249_T_G,chr18_31093490_T_G,chr18_31080273_C_T 0.00014328639925920681,0.026176748525728964,0.004444668756137834 0.002053875263128439,3.7895626071773765e-05,1.9855794171946574e-05
egfr MBD1_4 chr18_50276088_C_A,chr18_50276601_A_G,chr18_50275492_T_G,chr18_50275430_G_A 0.00014793743904567252,0.01877342572270696,0.003092273916220477,0.0033406482616730533 0.002775832151787685,0.0007205116796968372,0.027183042271681262,0.047488972926164726
egfr KIAA1671_2 chr22_25029373_T_C,chr22_25170874_A_C 0.00015698694769979702,0.0006020288880688977 0.04147687852552058,0.03878706897291035
egfr MET_3 chr7_116740945_T_G,chr7_116757685_T_G,chr7_116740947_C_G 0.00016797515698396606,0.002832945772163542,0.002231117554658809 0.00017295700570667475,5.0554093231126755e-05,0.0012218666498089645
egfr RCBTB1_2 chr13_49585356_T_A,chr13_49533768_G_A 0.0001756869709333519,0.009455073314037034 0.02533885676009956,0.019692263494698818
egfr PPL_4 chr16_4883459_A_G,chr16_4894423_G_C,chr16_4901058_T_G,chr16_4891747_T_G 0.0001758787943382569,0.0007098905861696843,0.0005647077594982514,0.011689794335935037 0.009286392985327631,0.04550405331166151,0.01682150071796396,0.0032410422551606864
egfr TMEM63A_3 chr1_225856800_GC_G,chr1_225856891_C_T,chr1_225845173_C_T 0.00017631469170194104,0.0005047149993335916,1.5371108451049484e-05 0.04262290781357216,0.031894233309554584,0.039853481810337744
egfr KDM4B_5 chr19_5110783_A_G,chr19_5047680_G_A,chr19_5111856_C_T,chr19_5152376_T_C,chr19_5114105_T_G 0.00018149502531503815,0.0011449297013059851,3.0255655048228253e-05,0.0056532335440754155,0.005029743152006167 0.0038743952075057523,0.0010649511420676163,0.008640482718151363,0.012419815562589162,0.0315424322762135
egfr TAF4B_2 chr18_26286027_C_A,chr18_26293570_AT_A 0.0001933876544072626,0.0006065453361074753 0.005234163638807017,0.02416136973363145
egfr MAP2K7_3 chr19_7905750_A_G,chr19_7911231_T_C,chr19_7910579_A_C 0.00020437876506728577,5.172101478935253e-05,6.985639899444967e-05 0.026466975715454883,0.014436739312155004,0.014559538606612087
egfr EGFR_5 chr7_55160480_C_T,chr7_55170771_T_G,chr7_55205133_G_A,chr7_55181370_G_A,chr7_55205662_A_C 0.00020841604787297526,0.00045465182013688124,0.02209047666362801,0.00015707737069901731,0.0019734565993096485 0.042584839287283,0.004588325394927623,0.003745674667154008,0.030349772078527886,0.0007797573368817686
egfr MED4_2 chr13_48079728_CAAA_C,chr13_48077399_A_AT 0.00021592440051490123,0.00970359638804136 0.028274397927711425,0.04285821577494423
egfr PSMG1_2 chr21_39183425_G_C,chr21_39175728_T_C 0.00022608775731841645,0.012584465994979182 0.00513068025831651,0.006708397725563725
egfr SYMPK_3 chr19_45823908_G_A,chr19_45835234_G_A,chr19_45842628_T_C 0.0002277738548719044,7.560389488032653e-05,0.007665716537369837 0.03948007686982654,0.026714512477614062,0.0420060391850977
egfr CNKSR1_6 chr1_26180299_A_G,chr1_26181802_G_A,chr1_26181989_T_C,chr1_26183270_A_C,chr1_26184255_A_C,chr1_26180691_T_G 0.00022855371657961118,0.000553633072814145,0.004976293349453925,0.0012311577321858017,0.00011380023959208459,2.366839986118124e-05 0.0031268776228605263,0.042309660108738684,0.031585176815995236,0.007340521806393782,0.03620130672603948,0.0014019419704167026
egfr LGR4_3 chr11_27373900_C_T,chr11_27380156_G_A,chr11_27368981_G_A 0.00022889582425503487,0.00022889582425503487,7.68908468665983e-05 0.02925705779271898,0.02925705779271898,0.007261247877037425
egfr VTCN1_3 chr1_117157003_C_T,chr1_117172345_T_C,chr1_117172578_ATTT_A 0.0002510217205927707,8.944919469827468e-06,0.016016251707355836 0.03055768777478911,0.023227355162109414,0.001594504991034824
egfr CRBN_6 chr3_3151010_G_T,chr3_3152273_A_C,chr3_3154589_AT_A,chr3_3175444_AT_A,chr3_3179746_C_T,chr3_3150840_A_ATAAC 0.0002626503373527541,0.013274951670738794,7.062286693324899e-05,0.0004048382754165016,0.003012811333138018,3.124023410218089e-05 0.0018118056645904023,0.00018124433406194467,2.1732312542326866e-07,7.214198132928058e-05,1.1224125713318842e-06,3.115850854605648e-06
egfr SMCHD1_5 chr18_2707621_G_A,chr18_2724932_A_T,chr18_2763699_C_T,chr18_2656105_T_G,chr18_2795854_A_G 0.00026503656166190905,0.009320150621080624,0.0042306245640629115,0.025865035105419227,0.0001080554536414254 7.290016375189198e-05,0.03677531412547839,0.02250972081801197,3.289863234127764e-05,0.037011899642268684
egfr HDAC11_2 chr3_13496579_C_G,chr3_13496863_T_TG 0.00027757125208069643,0.00015267586088891374 0.0271728892750038,0.0149184097594151
egfr PIK3CD_4 chr1_9720778_T_G,chr1_9721354_C_G,chr1_9722498_C_T,chr1_9710297_C_T 0.00030314689537509136,7.877458405180158e-05,2.4181398805762395e-05,0.002966501395718009 0.0012148539768169404,0.04037203630033394,0.011926248274336807,0.011351289482054416
egfr GCDH_3 chr19_12891586_G_C,chr19_12891749_T_G,chr19_12899706_A_G 0.000306793254674835,0.0003686903209515677,0.009343822168831345 0.0326186066813529,0.03376530749875928,0.00026130883839357806
egfr SEC11C_2 chr18_59152698_T_C,chr18_59158845_T_C 0.00030911539588566946,0.00956493460787828 0.0022574597582570113,0.029955010760308976
egfr SAFB_2 chr19_5667193_AC_A,chr19_5668433_GT_G 0.0003098805881779707,0.044739771014985504 0.002063538258127222,0.0026106809691974946
egfr ATP6V1B2_3 chr8_20212278_G_C,chr8_20218183_C_A,chr8_20214681_A_G 0.0003172005709671975,1.980177091110716e-06,7.277973285376886e-05 0.001539493748390498,0.02168738622123026,0.025450124159694176
egfr PUS3_4 chr11_125896149_C_A,chr11_125896278_A_C,chr11_125896309_G_C,chr11_125896312_C_T 0.00031902172789162014,0.0016768215144890312,0.00019026344698916655,0.0006367828673033801 0.02249427642441209,0.03343255062895107,0.0192679955094738,0.02546202950317841
egfr XDH_2 chr2_31383804_G_A,chr2_31398732_T_C 0.00033628525023115955,0.007506095065621764 0.04221528923752448,0.006330815240399064
egfr WDR7_4 chr18_56679573_T_G,chr18_56781547_G_A,chr18_56815915_A_G,chr18_57027330_A_ACGGC 0.00034150498667130327,3.859660027634848e-06,0.002362739963128272,0.006245785108127786 1.7583606026050092e-08,0.0071713352600959014,0.003286339206119661,0.04783850584421885
egfr GJB2_2 chr13_20189503_C_T,chr13_20189241_T_C 0.00035796332888395017,0.008815817126700895 0.005240901157790961,0.03930064243744275
egfr NFATC1_5 chr18_79486406_T_G,chr18_79486978_G_A,chr18_79449015_A_G,chr18_79451175_T_C,chr18_79467476_A_G 0.0003603073768446487,5.049273733042917e-05,0.02785434119032008,0.02220634088861789,0.0002507020345223831 0.018612271205492262,0.026732897678207176,0.0006549922975230749,0.0005874163668026321,0.003817175702412812
egfr TMEM141_2 chr9_136791905_T_C,chr9_136791680_A_G 0.0004169452454367874,3.984588209897019e-05 0.03333885281311693,0.020229651998436324
egfr GON4L_3 chr1_155750010_A_G,chr1_155813972_C_T,chr1_155826993_A_G 0.0004229050700030183,0.009903573910672052,0.002653632924091959 0.014960076537640884,0.0034455240142541605,0.03840390796922083
egfr THOC1_4 chr18_218753_C_A,chr18_259800_G_GA,chr18_264012_G_A,chr18_260303_A_C 0.00043864187590166915,3.026788938964173e-05,6.794818264684467e-06,0.0036079810571773866 0.01174777561883113,0.04550027828580569,0.038030003830584136,0.031572528408919984
egfr MOCOS_3 chr18_36268700_A_ATACAT,chr18_36195408_G_A,chr18_36195416_C_T 0.00045986586717034416,0.0014799368107284092,0.001731239408871138 3.5975000177046293e-13,0.007257645332317387,0.011340791435594116
egfr TBC1D1_2 chr4_37920795_A_T,chr4_38102880_CA_C 0.000488440493483436,0.0003703609091265926 0.005935046245136817,0.0040311926239692975
egfr MYOF_6 chr10_93402739_A_T,chr10_93335910_A_G,chr10_93341723_C_T,chr10_93349980_G_A,chr10_93456833_C_T,chr10_93379679_T_C 0.0005166123667663002,0.008644559399569549,0.030314897647199957,0.007378711399757192,0.014254715712501044,0.03684609798869681 0.008275987890594253,0.013383779511641422,1.0154009952651607e-05,0.013694532403103154,4.5730649026336375e-05,0.0006543495060757152
egfr RBBP5_4 chr1_205096605_G_T,chr1_205105296_C_T,chr1_205121757_C_G,chr1_205101436_A_G 0.0005227440198400762,0.00526416157273805,0.0030657012636972646,0.0013099169827028106 0.015139833707904771,0.008644227461685475,0.012113677398994695,0.04046396583686459
egfr CLASP2_2 chr3_33577059_G_GA,chr3_33684322_GA_G 0.0005299045117610777,0.035952102365944434 0.0005875510468728085,0.0001503619637647613
egfr PHACTR1_2 chr6_13206050_C_T,chr6_12749854_G_C 0.0005337924756049767,0.004317442990912475 0.00039532970764163586,0.035334891294853864
egfr ANAPC4_3 chr4_25396670_G_C,chr4_25396674_T_G,chr4_25405734_A_G 0.0005663311621920986,0.0013075373037905336,0.0465779350486673 0.000361328058170187,0.03220079967613157,0.0019550422066677508
egfr PSMD5_2 chr9_120820914_A_G,chr9_120824459_T_G 0.0005809565738534683,0.0007453253514985393 0.02520354146772891,0.030923039758435706
egfr ABCC3_4 chr17_50677651_A_G,chr17_50687493_T_G,chr17_50677654_A_G,chr17_50661130_G_A 0.0006252991041556168,0.01577297864138986,0.003896335000953405,0.0010188260367160796 0.031817085633522264,0.0088751921752167,0.04421726142800319,0.010430910480796323
egfr PDS5A_8 chr4_39826222_A_G,chr4_39908552_GA_G,chr4_39920322_A_G,chr4_39928282_TCA_T,chr4_39874433_GT_G,chr4_39902522_ATT_A,chr4_39922752_TAA_T,chr4_39849438_CAA_C 0.0006804734038066716,0.0008478404674630213,0.0026866381085943365,0.00132808107004332,0.004772686052629922,0.0001500621143076567,0.007431666608049384,0.000683239660165417 0.013430761436295064,0.011566738826207195,0.012551712088653194,0.04498488242774648,0.0069892257136405615,0.002775620894064112,0.00845393532716467,0.015679705858385958
egfr ARID1B_3 chr6_157084627_G_A,chr6_157084796_G_A,chr6_156779262_G_GCGC 0.0006899056725067633,0.00012305812201489173,0.003772804433314189 0.002480449952777213,0.003319459056638543,0.0297382920893214
egfr ATP6V1D_2 chr14_67347484_T_C,chr14_67347517_C_T 0.0006971003770886628,0.004311412775348075 0.0458931703260112,0.04673425843690365
egfr TSPAN15_2 chr10_69506088_T_G,chr10_69506076_T_C 0.0007322830521084773,0.005306461981362982 0.002401654647845401,0.00014212528801531312
egfr MLH1_3 chr3_37007142_A_G,chr3_37012077_A_G,chr3_37042249_A_G 0.000740971042730754,0.00173625605182141,0.0001471514352872128 0.0011032555560560838,0.0188504234858543,0.00278116952700519
egfr MCPH1_10 chr8_6563013_A_G,chr8_6414878_G_T,chr8_6415022_A_C,chr8_6442011_A_G,chr8_6444662_G_C,chr8_6621439_C_G,chr8_6621761_G_T,chr8_6643023_C_T,chr8_6643230_C_G,chr8_6445504_G_A 0.0007930301578494862,0.00783515709942311,0.0010653421345075958,0.01109994940299345,0.01748605668447073,0.014338437252537204,0.004071842491061435,0.0006919647053001271,0.012376440045340064,4.6837103256950894e-05 0.013491192511465546,0.00030214631498362885,1.4308699249286362e-06,0.000801511853950485,0.0006599247173344139,0.00022140087416861568,6.162352636469756e-05,4.2830362262517274e-05,0.0016916243554951818,0.00023822828634849838
egfr APLP2_2 chr11_130110790_G_A,chr11_130141602_T_C 0.0008186783504663072,0.005144250183511083 0.0021295365540794004,0.003817157441436617
egfr GDF11_2 chr12_55743444_T_G,chr12_55743453_A_G 0.0008261007388543191,0.03983988128537546 0.0038399667498981156,0.009308695658692865
egfr DHRS1_2 chr14_24296416_G_A,chr14_24296478_G_A 0.0008309168215997886,0.0004203355659529219 0.0011625249597744401,0.0009759887418146756
egfr HMBOX1_2 chr8_29019076_C_G,chr8_29049138_T_G 0.0008669919525569822,0.03171806222754735 0.004301459569275475,0.002544858829830765
egfr FAM129B_3 chr9_127525147_A_C,chr9_127531490_GA_G,chr9_127578821_C_G 0.0008771327036108232,0.0021288478614580747,0.0022519852618096852 0.020053464930431048,0.031013612085774283,0.0009666899162254512
egfr SQRDL_3 chr15_45676245_C_G,chr15_45659211_A_T,chr15_45659215_T_A 0.0008907771597097484,0.0020094614120517293,0.009204846533756823 0.014234174047984662,0.023564046281648054,0.01334902621156353
egfr PAWR_3 chr12_79621127_A_T,chr12_79621127_A_C,chr12_79690012_G_C 0.0008953392161992621,4.018282599405261e-05,0.00946824676498348 0.00916697548400727,0.004195646894367022,0.04023621560178265
egfr ZMYM4_2 chr1_35386039_A_G,chr1_35398970_A_G 0.0009255268514009688,0.0010268025209398274 0.047414902378186935,0.03220211892803819
egfr PNISR_3 chr6_99400577_G_T,chr6_99400380_A_T,chr6_99400680_T_C 0.0009649647745143484,0.0007159697124499053,0.04773876660712681 0.00024058514444646938,0.04850971607266792,4.045878429706501e-05
egfr KCTD1_2 chr18_26455686_TTTTG_T,chr18_26455824_G_A 0.0009651254517760071,0.00044897282981570764 0.011878660133524677,0.022677959399150814
egfr YEATS4_4 chr12_69360050_G_A,chr12_69360067_T_C,chr12_69365771_AT_A,chr12_69359732_G_C 0.0009657838134951767,0.010865427433622845,0.00010196861904854136,0.004781622790417561 0.00020734016607029562,9.576513142549652e-05,0.005769237544482665,0.00015854860163792644
egfr MYH14_4 chr19_50257459_C_G,chr19_50268152_A_C,chr19_50223372_A_C,chr19_50210705_A_C 0.0009907478792200786,0.00031027234534027856,0.009603188672713292,8.610623849100771e-05 0.003155642857162157,0.02679430539669753,0.04503905394492344,0.01011266806040028
egfr TNRC6B_3 chr22_40246081_G_A,chr22_40322746_C_G,chr22_40270313_CTT_C 0.0010055560691593062,0.007906209412661305,0.009164202590452458 0.0005779404176446281,0.0047436478866502065,0.0364705418337816
egfr INTS9_7 chr8_28780706_C_T,chr8_28787754_C_T,chr8_28793781_A_C,chr8_28793783_A_C,chr8_28835266_C_T,chr8_28775581_A_C,chr8_28775811_A_C 0.0010081741289715016,0.004592362992120706,0.0005120698884621372,0.0002773767656391789,0.02714848429874154,0.00020236348372473448,2.4854306942254155e-05 3.2138156864211546e-07,5.188443093736729e-09,4.024976616918393e-06,2.0930318384840388e-05,1.818850464108077e-06,3.257318543578891e-07,0.018623738854211223
egfr SLC9A2_2 chr2_102708404_T_C,chr2_102683152_T_C 0.0010228970665369316,0.0005020081620733607 0.009615984790689362,0.009480536166577638
egfr CABYR_2 chr18_24159761_T_C,chr18_24143046_A_T 0.0010567833091170056,0.0014968601112293539 0.005047158957377522,0.04396847891686953
egfr GTF3A_3 chr13_27435783_G_C,chr13_27434894_G_C,chr13_27424632_T_C 0.0011190222584791265,0.004681955550098893,0.007918207229892667 6.8305505569380366e-06,4.651074413645253e-05,0.009084963551764854
egfr C17orf80_2 chr17_73243051_A_T,chr17_73243095_T_G 0.0011654886198261731,0.004494422448579687 0.010085515976883222,0.004743723689710052
egfr SMU1_3 chr9_33042147_G_GC,chr9_33048282_A_C,chr9_33062151_T_C 0.0011669696398791268,7.696816352170192e-06,0.01499894245869885 0.04706645923394905,0.031220105263435657,0.0036210535474734524
egfr APP_3 chr21_25881669_T_G,chr21_25982373_C_A,chr21_26053118_T_G 0.0011674640267523098,9.245713138747127e-05,0.004308340981093568 0.0009005203285702301,0.013334900192842466,0.04036723851049838
egfr SF3A2_2 chr19_2247907_A_C,chr19_2248684_C_T 0.0012266864812599976,0.002990131415570729 0.0030981828107111728,0.0468855780292127
egfr MCM3AP_14 chr21_46242985_CA_C,chr21_46245202_GAAGA_G,chr21_46254361_G_A,chr21_46256797_G_A,chr21_46257020_T_C,chr21_46258860_A_G,chr21_46261213_T_C,chr21_46265873_T_C,chr21_46266025_A_G,chr21_46266238_C_T,chr21_46266260_T_C,chr21_46272884_C_T,chr21_46275481_C_G,chr21_46285323_T_C 0.0012527393891514607,0.00036535930217642055,0.0024609384326425487,0.04643229751040803,2.118510728826028e-05,2.887414182548247e-06,1.05276826358399e-07,0.00025970635193207507,0.0005620952054741439,5.716570824504117e-07,2.4174995461629513e-07,0.005818667124032619,0.0467983305638919,8.653902898907501e-05 0.0002736694696369044,1.7616074069549246e-05,1.3003369428929314e-06,2.3123117180340123e-05,2.0562643179742515e-06,8.354163607590267e-05,0.00029806921327546384,5.3648509797744586e-06,1.5227506753175702e-05,7.251148442399709e-05,0.00010743801329645878,1.1615547532865214e-07,1.858126949270524e-05,3.8129306546053804e-06
egfr CLIP4_2 chr2_29160508_G_A,chr2_29167435_A_G 0.001256177781998004,0.0032393618837062445 0.004054702946614456,0.02363327883448803
egfr TSC22D1_3 chr13_44574373_G_T,chr13_44574380_T_G,chr13_44573675_A_G 0.001377124084836583,0.015722049040498624,0.02470162730235456 0.0064804726533923464,0.0020304861527569297,5.907708401459935e-06
egfr PKP3_3 chr11_403980_G_A,chr11_404317_C_T,chr11_397331_G_C 0.0013876622699982295,0.016481995505848203,3.1228708373215485e-07 0.018674886861837936,0.009799627021991927,0.04880244320980319
egfr CASP8AP2_4 chr6_89867828_C_A,chr6_89846678_CT_C,chr6_89854793_T_G,chr6_89867387_T_G 0.0013957399418989352,0.0012351347166879073,0.01485793169450881,0.029929799896047743 0.004638447540709211,0.00012650141154496166,0.0049509957510286366,0.007919221858804896
egfr SUGP1_3 chr19_19297181_T_G,chr19_19320614_T_G,chr19_19321154_G_T 0.001497727430536191,0.0019392453885837852,1.1604792778575085e-06 0.004713359874536658,0.0005015062282813169,2.8690586178505662e-05
egfr MTMR14_2 chr3_9701714_TGGAG_T,chr3_9688859_C_T 0.0015228522402605245,0.0034777774244127892 0.0064175485415249155,0.007328897092709648
egfr RIOK2_2 chr5_97167674_T_C,chr5_97179013_C_G 0.0015264299232640686,0.0009434563320843556 0.018107759921786072,0.01839083931192911
egfr HCLS1_5 chr3_121631746_C_A,chr3_121642799_G_A,chr3_121642940_G_A,chr3_121647276_C_T,chr3_121647530_A_G 0.001531370286315401,0.007140010061027548,0.0056491920403494,0.0056491920403494,0.0033035345652737084 0.008666157872154578,0.028236059065420614,0.02925717871219745,0.02925717871219745,0.035251625940568736
egfr USP20_2 chr9_129868385_TGAC_T,chr9_129868775_T_C 0.001542609843192008,0.006644626432996628 0.028200134219961023,0.0362382211673806
egfr OGT_3 chrX_71555839_AT_A,chrX_71555852_A_G,chrX_71556880_G_A 0.0015512975406232336,0.0006090442157279421,3.794330620993244e-05 0.03251106613283236,0.03051485289420325,0.02757062507023744
egfr ILF3_4 chr19_10677068_C_G,chr19_10683073_A_G,chr19_10683954_G_T,chr19_10689074_T_C 0.0015595887966999382,0.0008443307208163777,0.0014177004651836508,0.006992884477782401 0.02905299869911714,0.023662506952371584,0.024462171404793464,0.04401306590016355
egfr AKAP17A_6 chrX_1593528_G_T,chrX_1593824_T_C,chrX_1593829_A_C,chrX_1593416_T_G,chrX_1599467_G_A,chrX_1601004_C_G 0.0016145426205006856,0.006626142886833432,0.0006549722036186197,1.3622821646377586e-09,1.4367220837077828e-05,0.0013113963664485734 1.7500984806304813e-06,0.004424305821371996,0.031339887946813465,0.0002164120997390045,0.0019808227552202268,0.022975239267281157
egfr HLA-DPB1_25 chr6_33084838_T_C,chr6_33086094_A_G,chr6_33086100_G_A,chr6_33086430_A_G,chr6_33086431_C_T,chr6_33086458_T_G,chr6_33086503_T_C,chr6_33086504_G_A,chr6_33086525_T_C,chr6_33084940_A_C,chr6_33084942_G_A,chr6_33084946_C_G,chr6_33084959_G_A,chr6_33086548_G_C,chr6_33086623_T_C,chr6_33086627_A_G,chr6_33086636_T_G,chr6_33086637_T_A,chr6_33084934_T_C,chr6_33086390_G_A,chr6_33086399_T_A,chr6_33086400_T_C,chr6_33086554_T_C,chr6_33086565_T_A,chr6_33084918_T_G 0.0016170360777901915,0.035517335536449965,0.03859616732889496,0.0050484605719981115,0.006920322099559346,0.04723136941351201,0.01042058063158112,0.01982161136592692,0.004676661817713314,9.909297446240884e-05,0.00013864663028350917,0.0002553757712440544,0.00010148054048444211,0.0005733999890735651,0.001447191231242919,0.0006504207970493822,0.0014159972834331574,0.0011151099996242373,1.670066308093462e-07,0.002181120675090949,0.001551134422399547,0.001551134422399547,0.00018558558739674276,0.00027961484945332547,0.04098305035004495 0.01738899621763897,0.0071970972262367875,0.0015085198751619124,0.009855204235078744,0.009159540445250336,0.0034148006003537623,0.0007725393378843376,0.00046914802311591013,0.0002211234236168895,0.01812705600921171,0.02551712776803155,0.02768815887474311,0.01961732896362046,0.00424548612011435,0.03272474670019398,0.034386513937956574,0.03829938821939845,0.02718298788851184,0.0008766728067700178,0.0010412174325617669,0.00027430911944352433,0.00027430911944352433,0.007068880728833383,0.0015589855961860727,0.0023729962607638784
egfr ERBB2_7 chr17_39723335_A_G,chr17_39725167_A_G,chr17_39727303_T_G,chr17_39723531_A_C,chr17_39728154_A_C,chr17_39709434_A_C,chr17_39728753_A_G 0.0016350878443782172,4.136237081824547e-05,0.046602377151608726,0.0033861558195955052,0.0037588249676302338,0.03412502593916668,0.0037443415073794024 0.030443197190865717,0.016249088634527818,0.0009745478853255011,0.014043142620610086,0.002489169967351341,0.005151661954164628,0.0238332618696792
egfr CNOT10_5 chr3_32773739_A_T,chr3_32705030_A_G,chr3_32717271_G_A,chr3_32727933_TAA_T,chr3_32704796_GT_G 0.0016526003311275095,0.0001231320148601887,0.00017728596732259782,0.009536795008099045,0.003991838672618705 0.0019461949221222566,0.0007110070373588129,0.0032142136890770555,0.009535253937430231,0.00725632017358903
egfr BTAF1_3 chr10_91959744_A_G,chr10_91959746_A_G,chr10_92024732_G_GTTTTTTTGTT 0.0016639394777511788,0.017417232932444852,0.002725136934144748 0.0011854132574195902,0.002486161819230707,0.02294891315626264
egfr KDM2B_2 chr12_121579961_G_A,chr12_121444386_T_G 0.0016808767205032673,0.0018129427277068664 0.04715734536774355,0.019501973878425127
egfr OSBPL8_3 chr12_76371622_A_G,chr12_76459031_C_T,chr12_76389816_G_A 0.001685976661542144,0.0019376612844524102,0.00034069060776455845 0.010145024239484482,0.023570151478943115,0.01081801975958232
egfr SPATS2L_4 chr2_200477598_G_T,chr2_200412421_T_G,chr2_200477943_T_G,chr2_200473083_GAA_G 0.0017077762924250339,0.005542406637614594,0.008957206491580714,0.02371288438579117 0.021972245787165747,0.03547678698863923,0.016080388811817628,0.0009052273948575811
egfr KMT2C_2 chr7_152273692_G_A,chr7_152177504_T_G 0.0017215770748878,0.0257040166730586 0.02044755694417402,0.0007976241891358237
egfr C3_8 chr19_6679370_G_T,chr19_6679500_C_T,chr19_6679552_T_C,chr19_6693625_A_G,chr19_6710771_G_T,chr19_6713164_G_C,chr19_6713251_G_A,chr19_6718376_G_C 0.0017242987096359706,0.011130009901872313,0.01112305118572054,0.03308700773309592,0.0007547726119911367,2.8401856724118085e-05,9.337374703033051e-05,0.00015757450123976866 0.021139612203482698,0.001328408206242609,0.0024788445051524576,0.009567716450671235,0.00949274728217466,0.015144191214707904,0.01135067374028043,0.013151961372936128
egfr NFX1_3 chr9_33290534_A_G,chr9_33290690_G_C,chr9_33344254_T_A 0.0017340354418381332,0.00213071003554307,0.0008944872419168263 0.004533123491706767,0.03459515757598255,0.005356381351212509
egfr KATNAL2_4 chr18_46963135_T_TGC,chr18_46969062_T_TGC,chr18_47028569_T_TGC,chr18_47069438_A_T 0.0017826363249020844,0.0002158210829164119,0.002959998960433205,1.0166082620431142e-06 0.023566439092900897,0.042581318341999685,0.01792891562738572,0.04594422713064072
egfr PLRG1_8 chr4_154538042_A_T,chr4_154539961_T_C,chr4_154540535_A_C,chr4_154540996_A_T,chr4_154544383_A_G,chr4_154545783_T_C,chr4_154546035_A_G,chr4_154548807_G_GA 0.0017837327552204187,0.0022747756662197635,0.013232282684609756,0.006089524083842604,0.023466965037692716,0.011286717487280188,0.015766497021373137,0.001132424851953552 0.0025156591482322463,0.003876861205834139,0.008064183834782563,0.004736898325652559,0.004629934695328492,0.00625636632504058,0.006403275082048386,0.0051675452547446255
egfr EDN1_2 chr6_12295840_T_G,chr6_12295843_T_G 0.00181409210724337,0.0002763328454078789 0.024241257142762068,0.012273310260196891
egfr RABEP1_2 chr17_5381248_TAA_T,chr17_5361621_C_T 0.0018150712755665734,0.004152920156402154 0.007056745600928623,0.01880219353285387
egfr RUNX3_2 chr1_24907301_T_G,chr1_24907326_T_G 0.001835528705698884,0.0008816631461578386 0.0479402881785652,0.03367486268556343
egfr ARID3A_2 chr19_929678_G_A,chr19_965056_A_C 0.001844502898018781,0.0038221459346221604 0.0024448512910076343,0.038475803182823655
egfr SETD2_6 chr3_47037622_G_A,chr3_47083895_G_A,chr3_47084411_A_C,chr3_47084426_CT_C,chr3_47101417_TCC_T,chr3_47121171_A_G 0.0018886443163515503,0.0005724676673950148,0.0018507014329319895,0.002298087295161151,0.0018577181187481573,0.000573845912909288 0.000977617083994294,0.008205866594339892,0.008011204119723829,0.009083566444260623,0.0015764712914139378,0.0002475067417184235
egfr MYO1E_4 chr15_59272288_G_C,chr15_59223315_G_A,chr15_59178167_C_T,chr15_59138181_A_C 0.0019255092745879315,0.027929898310990055,0.00031389151980896725,0.04411515555617615 0.006181875879725325,0.0073567891788311425,0.014590984354000915,0.000506485287819266
egfr SUGP2_5 chr19_19024510_A_G,chr19_19025732_C_T,chr19_18994964_G_A,chr19_19026233_T_A,chr19_19010089_T_G 0.001983285518752092,0.002941993796204625,0.01284029709782453,0.0020741831309949127,0.0008037924072482433 0.040831519054544435,0.008182273259557721,0.005749298256034085,0.007605074821863024,0.027745888328438603
egfr KLHL18_3 chr3_47319581_T_G,chr3_47344095_C_A,chr3_47322481_G_T 0.0021891626387678365,0.0006911454072889093,0.0001458644297550943 0.013218876001835087,0.0063137500959640856,0.018113274866617776
egfr TYSND1_2 chr10_70138599_C_T,chr10_70140172_G_A 0.002210990629147794,0.0039640911222843436 0.009659099597965872,0.027700702531791875
egfr EIF1B_5 chr3_40309993_C_T,chr3_40311393_C_T,chr3_40311934_CAG_C,chr3_40311768_T_G,chr3_40309649_C_G 0.0022271726409335488,7.503385234156634e-05,3.177548305907501e-05,2.1365604310883664e-06,0.006831469965345718 0.005496962588873379,0.0028348307389023737,0.0036905138907599726,3.949648255514959e-06,0.04857611284248277
egfr C14orf79_2 chr14_104991443_T_G,chr14_104992803_A_C 0.0022393155386724074,0.009479451263550959 1.7720854995940125e-07,7.586102006604381e-07
egfr SLC52A3_2 chr20_761203_A_G,chr20_763790_T_G 0.002271842149158581,0.0019785326127115858 0.0003747217630289052,0.003089764091274667
egfr HDAC5_2 chr17_44087216_A_G,chr17_44077102_A_G 0.0022775299741103626,0.009100177186215046 0.03161998848113075,0.021561030479614426
egfr TCF7L2_4 chr10_112951117_C_T,chr10_113165703_A_C,chr10_113165557_GA_G,chr10_113141157_T_G 0.0023062734857754803,0.006196689121801137,0.00015949311848004983,0.01042058063158112 0.01060529288873283,0.008309178089758909,0.04233413143117931,0.004504822920252362
egfr DSP_2 chr6_7577915_A_C,chr6_7581379_A_G 0.002345981327408041,0.02625851263459552 0.0018316675069518392,0.005935959963292785
egfr GAS7_3 chr17_9943314_G_A,chr17_9943407_C_A,chr17_9940079_A_C 0.0024862474118096554,0.02161659825841676,0.01209844734945125 0.014304203615809547,0.007643530014898026,0.02182596122662912
egfr ARHGEF5_5 chr7_144365079_A_C,chr7_144371121_T_C,chr7_144371117_T_G,chr7_144364997_T_C,chr7_144365475_T_C 0.0024945926126355923,0.02354548207827752,0.006211748094610735,0.002934715516170928,1.727507617843059e-06 0.02343547139067424,0.007520412833757487,3.130275501973943e-06,0.02778730920062768,0.003065464879158348
egfr PTPRU_3 chr1_29275579_A_C,chr1_29310715_T_G,chr1_29255395_A_C 0.002539773248455689,0.0077226993558171956,0.0009778041944005973 0.007805553893565897,0.021084479691732515,0.046498222792818684
egfr TTC39A_2 chr1_51288088_T_G,chr1_51295930_G_T 0.002570863553329518,3.4909921895622464e-05 0.0009000808652072745,0.009859747746545187
egfr KRT15_3 chr17_41516910_C_A,chr17_41518370_T_G,chr17_41518744_A_C 0.002573274763251264,0.011567941016623695,0.003420135618507444 0.005435309336568784,0.004600527769071169,0.020891294013713143
egfr UBXN8_5 chr8_30744093_TC_T,chr8_30744288_C_T,chr8_30751256_A_G,chr8_30751544_T_G,chr8_30751561_A_T 0.002591192476579632,0.0006909486125387932,0.02443874890142141,0.03582659928743899,0.03582659928743899 1.0603773748192244e-05,4.865545060608271e-05,6.152112049146202e-05,3.811929186552625e-05,3.811929186552625e-05
egfr SMARCA4_3 chr19_11003321_G_T,chr19_11010261_C_T,chr19_11026459_T_C 0.002630441388397466,0.010463060303081006,0.010088756192701873 0.010970724428159849,0.007818649393052565,0.008366105586796981
egfr PSMD6_2 chr3_64018733_C_CA,chr3_64023832_T_C 0.0026976125076584256,0.009878175034845338 0.010870617478385693,0.0044822108745555264
egfr CCDC18_7 chr1_93226524_AAT_A,chr1_93232665_C_G,chr1_93180876_T_C,chr1_93221838_T_C,chr1_93239253_G_A,chr1_93226314_TG_T,chr1_93180563_T_G 0.0027123682464393244,0.0016657739488188466,0.0033797977817805816,0.0015978624867728733,0.002134999320804664,0.013590020119742256,0.003793743444563949 0.04835531632243841,0.0045740699346053185,0.00032147121850177287,0.0017542576026547778,0.0017542576026547778,0.003812032810040999,0.0440564257256616
egfr MKRN2_2 chr3_12572367_T_C,chr3_12576770_C_T 0.0027864675750747985,7.698740851570175e-06 0.0004133954800997532,0.00023875055451781275
egfr POU2F2_2 chr19_42122415_A_C,chr19_42116791_T_G 0.002831354927429977,0.00132487414614545 0.0009318465407261826,0.03195305321524156
egfr CSNK1G2_2 chr19_1941300_C_CG,chr19_1978367_A_C 0.002838297409364801,0.002057750736247525 0.0019266812436141687,0.04165592627236607
egfr NADK_4 chr1_1754601_G_T,chr1_1755504_T_C,chr1_1755523_C_T,chr1_1757030_C_G 0.0029196774804306136,0.0022487075080235863,0.0010425578675322944,0.004582127513664698 0.031872533533518106,0.005752610352558396,0.0031781335571060463,0.03556781287056178
egfr CD151_2 chr11_837662_TG_T,chr11_835877_C_T 0.003028852216804449,0.04104019245722205 3.3851264417503082e-06,0.005759250847020773
egfr ATP5A1_9 chr18_46098069_T_C,chr18_46086016_C_T,chr18_46086895_T_C,chr18_46086986_C_A,chr18_46087562_T_C,chr18_46088355_G_T,chr18_46090014_T_C,chr18_46098295_T_G,chr18_46090084_G_T 0.0030434677700528394,0.0004952827031339936,0.007810554102540824,0.000648733348082285,0.013897849420604671,0.002385765549363269,0.0010062790676919331,0.005315177457540565,0.01959258956571804 0.0003047097440701736,0.0142075393191002,0.036323160579493724,0.013872652612254888,0.0036567482317310593,0.02085147005163321,0.01507674177782532,0.03454712220311499,0.007087269321528623
egfr ACTR8_2 chr3_53876892_G_GT,chr3_53876872_GA_G 0.003050264516832101,0.008934315374097621 5.979539416096826e-07,0.005988354207232076
egfr KDM4C_3 chr9_7105548_G_C,chr9_7170165_G_A,chr9_7174813_T_A 0.003056285777006115,3.848309807154845e-06,0.028252899669062883 0.04853749604959928,0.04549941716484139,0.006907446061910031
egfr AZI2_2 chr3_28331971_C_CA,chr3_28340396_A_T 0.0031048857689516462,0.003592307504254993 0.014552320913166257,0.004305743220750069
egfr SERTAD4_2 chr1_210241533_TC_T,chr1_210241536_T_C 0.003132119859215549,0.009639231593611885 0.019963608830813308,0.006491338228956634
egfr USP15_4 chr12_62302696_T_G,chr12_62383784_G_T,chr12_62404146_G_T,chr12_62335441_G_C 0.0031338510061822643,0.014094139089898441,0.0031672583932668176,0.002293994252085232 0.00033081922207003954,0.0033557619531166464,0.00033479875073063453,0.039619833047337696
egfr DOCK1_3 chr10_127012556_G_A,chr10_127444251_G_A,chr10_127248024_G_T 0.0031585127425178675,0.027688640963832358,0.0004879172723173928 0.004938898221400919,0.007801850145866487,0.020184142497530616
egfr ITGB4_4 chr17_75736347_G_A,chr17_75739839_G_A,chr17_75742534_T_C,chr17_75754823_A_C 0.003162157220078509,0.008328692436238487,0.007894779942929558,0.009860822677928005 0.01217344559335353,0.002457354260511787,0.01159864028497844,0.005496381411893582
egfr ZDHHC17_2 chr12_76843188_G_A,chr12_76815330_A_G 0.0032793703796479517,0.0004434027342669209 0.011228793208829205,0.0047926477879100746
egfr STEAP4_2 chr7_88282586_G_A,chr7_88283906_C_T 0.003287923696320924,0.0091566014690908 0.020956268813510096,0.020511289316670928
egfr SON_2 chr21_33553093_A_C,chr21_33553095_T_C 0.003287986051022628,0.0002182856164179604 0.023262781799198717,0.04085529307129965
egfr SUZ12_2 chr17_31937449_T_G,chr17_31937443_C_G 0.0032919118028606463,5.6901277653871055e-05 0.001414433092115542,0.02301260051890533
egfr ZNF708_5 chr19_21294577_C_T,chr19_21309149_T_A,chr19_21309260_G_A,chr19_21294601_T_G,chr19_21310453_A_T 0.003305225750188495,0.0035049021956979373,0.004520698246333428,0.0002495831365867789,0.0067675270617948155 0.007544201865148675,0.008126720123629898,4.891895383413758e-05,0.0371668734968966,0.010566885319869566
egfr NPAT_3 chr11_108173261_C_T,chr11_108188273_T_C,chr11_108222481_A_T 0.003344965508099712,0.00917775939993597,0.039703241026176714 0.002496786878352684,0.04574657942913745,0.0037813176541691743
egfr HSPG2_4 chr1_21848107_A_G,chr1_21857246_A_G,chr1_21854055_T_C,chr1_21885485_A_C 0.003347609104205378,0.0006068526113653472,0.003704007084337551,0.00357256954025205 0.02697977272492986,0.03734459078034153,0.0018455746031783011,0.028105372966297285
egfr TOP2B_6 chr3_25618603_G_GT,chr3_25620066_T_TA,chr3_25630287_C_T,chr3_25632344_A_C,chr3_25632600_C_A,chr3_25638247_T_C 0.0033763968792717173,0.008450908635462133,0.0012336549489001688,0.00024044846753362568,0.0010363758807633305,0.0007533307901546944 0.009406841430847504,0.006029442482514222,0.011303133266640238,0.01883862996744124,0.018119501937010576,0.00877690000990295
egfr MUC16_3 chr19_8894929_A_T,chr19_8979498_T_G,chr19_8957088_C_T 0.0034029575974152395,0.00041258558252529193,0.001514661605616884 0.03041637790901308,0.002432253712629655,0.03213344574711092
egfr TMEM144_3 chr4_158244471_A_C,chr4_158253356_T_G,chr4_158253361_T_G 0.0034876691228988683,0.0005647077594982514,0.0008326481477321537 8.607739077270522e-05,6.799118981257274e-05,0.0018072956471693355
egfr SDC1_2 chr2_20204203_T_G,chr2_20202279_A_C 0.003538404752618725,0.0156379764488537 0.012274967718012342,0.005607450656810002
egfr RBM6_7 chr3_50054242_G_T,chr3_50054246_C_T,chr3_50054250_C_T,chr3_50054257_G_T,chr3_50054263_T_G,chr3_50075177_T_G,chr3_50066484_G_A 0.0035570559373772188,0.00580221866025999,6.528791603289091e-07,0.001554315699435568,0.0007276852324929738,0.008508212434548797,0.002518709860742996 0.0124136469122058,0.0004024483543288937,3.272618868931358e-05,5.8729619078742086e-05,0.00033057063887385755,0.000930075295183941,0.014325869585835831
egfr FIP1L1_2 chr4_53377738_T_C,chr4_53414538_G_GA 0.003618394551763958,0.000808630514933739 0.020612870650917825,0.014620279830838013
egfr BAZ1A_6 chr14_34773800_G_A,chr14_34761774_C_T,chr14_34761902_A_T,chr14_34771458_C_G,chr14_34780118_A_G,chr14_34862082_G_A 0.003674207621815091,0.00048794862757524084,0.0004529362621637724,0.00048794862757524084,0.0004529362621637724,0.0008633899521319537 0.020819109086183382,0.029434275834813995,0.038030144241646684,0.029434275834813995,0.038030144241646684,0.029434275834813995
egfr ABLIM1_2 chr10_114468289_G_T,chr10_114613516_C_T 0.003679575880821695,2.068694569003633e-05 0.013324532381057309,0.007365229118612223
egfr KCTD11_3 chr17_7356629_G_T,chr17_7356036_T_C,chr17_7353417_T_G 0.003754571069046404,0.00017366868689943718,0.0012390848435611386 0.04600482755406116,0.034157938547959045,0.0012683162409826913
egfr MICALL2_5 chr7_1442358_T_G,chr7_1448634_T_G,chr7_1438692_G_A,chr7_1438940_G_A,chr7_1434765_T_C 0.0037969325863282813,0.03384278289950645,0.029060946696468106,0.029060946696468106,0.0032003913710269877 0.003849439864891702,0.00957207447144348,0.001706040259270731,0.001706040259270731,0.009156797658911076
egfr RFC1_4 chr4_39304977_A_C,chr4_39317086_A_G,chr4_39327482_G_A,chr4_39366034_T_C 0.003804607068014229,0.002653298567768597,3.2670263647126826e-05,0.042208647376131 0.0020300192179148733,0.00027426635734190813,0.008638827908989666,0.0022061266378501725
egfr AP1M2_5 chr19_10572926_C_T,chr19_10579645_C_T,chr19_10587097_A_G,chr19_10587125_G_T,chr19_10579014_TC_T 0.0038087692058226532,8.991675208563765e-05,1.1792724900645332e-05,5.261102684897293e-05,0.001877531631940374 0.02140839327697613,0.010527568877864577,0.0015316982164778213,0.023908631854345174,0.00821632833656041
egfr RPS23_2 chr5_82278173_C_T,chr5_82278363_C_T 0.003957786808705407,0.0008315075457503006 7.911328672036997e-05,2.402875788954321e-05
egfr BARX2_2 chr11_129436792_A_C,chr11_129436677_C_T 0.004015743982394933,3.8908364285059496e-05 0.0011297752143511178,0.006988734279853065
egfr LRRC1_3 chr6_53913863_T_G,chr6_53920478_C_A,chr6_53899709_T_G 0.004131339558552957,0.0030469251357492584,1.3663885062737747e-07 0.02863343366704425,0.016849492489466617,0.0009777953947081833
egfr POGZ_3 chr1_151423306_T_C,chr1_151407350_A_C,chr1_151459156_T_C 0.0041738932600083895,8.993795886819927e-07,0.008612349643764727 0.020015181832936737,0.02909488569964382,0.009809035888391762
egfr PRKCI_2 chr3_170275187_CTTT_C,chr3_170263168_CAAAAA_C 0.00425052374891476,0.002760121279997125 0.00012798467543814748,0.021989752739530143
egfr PGBD1_2 chr6_28296652_T_G,chr6_28298177_A_T 0.004288328285551539,0.00932669296817631 0.005702673764439882,0.020264770709017343
egfr LGALS8_3 chr1_236537373_GAGC_G,chr1_236539197_AGTTT_A,chr1_236551447_T_C 0.00435552243438307,0.02490692830672263,0.005408439057885871 0.0007287918934518675,0.002689054589007359,0.013132223069499007
egfr CYP4F11_7 chr19_15913852_G_C,chr19_15914366_C_T,chr19_15924707_G_A,chr19_15927524_G_A,chr19_15927580_G_T,chr19_15929482_A_G,chr19_15929663_T_C 0.004494422448579687,0.004118655653677505,0.009014030424870815,0.007737694175519336,0.005296914283554929,0.006573618747648885,0.0045029584577228 0.01037304937937457,0.022954596803030098,0.0124267741256932,0.011141708950444295,0.011312909542474079,0.016341169913201302,0.013422572430360932
egfr ZNF24_3 chr18_35337816_G_GA,chr18_35337680_T_C,chr18_35344446_G_A 0.004517003572403403,0.00020451573869716152,0.02552298264953765 0.012709161524744772,0.04404021168973007,0.008269738810110396
egfr ANKS6_2 chr9_98796162_G_A,chr9_98778486_A_C 0.0045700537784898465,0.009257993261520582 0.047044500480316616,0.03370066145919663
egfr POLR2B_6 chr4_56995192_C_T,chr4_57010789_G_A,chr4_57015549_G_A,chr4_57025073_G_A,chr4_57005234_AT_A,chr4_57023798_AT_A 0.004738473697291275,0.00020500907676743697,0.0003428363180097953,0.00033030198738810576,0.000896266309671023,0.010078450270635015 0.00041802227600176717,0.03709404459710368,0.03851787302536296,0.03254648423802934,0.03704331970217288,0.007472844031288456
egfr CDC42BPB_3 chr14_102939620_T_G,chr14_102952453_T_G,chr14_102945931_T_C 0.0049774861882444345,0.0002680622756333545,0.004938189506165365 4.775637628078603e-05,0.003315245095495249,0.001918499391114136
egfr WDR62_3 chr19_36058788_C_T,chr19_36084743_G_A,chr19_36094002_C_T 0.005088637492213912,0.016915078735087723,0.007443859285838674 0.0005331846126391098,0.000415677937125236,0.0005211199976091131
egfr PLCB2_2 chr15_40298884_T_G,chr15_40297623_G_A 0.005308041472208479,0.0013941969299030182 0.025458039339188058,0.04960868971387879
egfr ZEB1_4 chr10_31461157_A_C,chr10_31521191_A_C,chr10_31521414_A_T,chr10_31461247_AT_A 0.005342806393282525,0.01137703502325166,0.0014780611664163069,5.800757504246017e-05 0.013618649263675358,0.006377825075174489,0.011119739548999731,0.0019400920584000448
egfr NDUFAF4_2 chr6_96891399_CA_C,chr6_96896910_G_A 0.005489763925784804,0.0005269475943804068 0.01909002509011261,0.009369364198285348
egfr PHIP_9 chr6_78947674_G_A,chr6_78954723_T_C,chr6_78955031_T_C,chr6_78955493_T_A,chr6_78969860_A_G,chr6_78985312_C_T,chr6_78998206_C_T,chr6_79043075_T_C,chr6_78947709_T_C 0.005530164992886238,0.00548954353554207,0.01455660590235654,1.6913729880297845e-05,0.0035647193470514853,0.005289398736036421,0.001837097400913216,0.004209432623363282,0.02442132743404569 0.0010048550446085317,0.00648756713202656,0.0009432749408838033,0.009594339103514994,0.0017203137452171692,0.0007527047164367361,0.006763071535609179,0.0016364259457283912,0.0006553233953188175
egfr C6orf203_2 chr6_107044172_C_T,chr6_107051038_GTTTTC_G 0.005594780806642859,0.010350958813062314 1.8543097341742985e-05,4.7416804336943046e-05
egfr RIOK1_2 chr6_7390137_G_T,chr6_7410502_GT_G 0.0056620989198510035,0.009940460227242327 0.004558417307934729,0.0007644747214841657
egfr STX2_3 chr12_130796169_T_C,chr12_130821769_C_G,chr12_130827084_G_A 0.0057763908603848755,0.0026232291323331123,0.0017127068028307182 0.03019238327054641,0.01065610617547119,0.004236660791662807
egfr DOCK9_6 chr13_98797273_A_G,chr13_98888796_T_A,chr13_98848509_C_T,chr13_98902701_G_A,chr13_98883901_TA_T,chr13_98977850_C_T 0.005927598026328671,1.199291147137571e-06,0.00025790841294325934,0.0030628908663900517,0.003688722979152048,1.1373148571396284e-05 0.006004783016582045,0.01781055671478815,0.005840989451706359,0.025244747630348088,0.020609371467392473,0.01526774575825921
egfr ADAM15_4 chr1_155056046_G_A,chr1_155058081_A_C,chr1_155058900_C_T,chr1_155053372_T_G 0.005983172351155387,0.003608774130493322,0.02011005006826893,0.013070176515727179 0.02587883400458268,0.038829781369162535,0.006114928575864872,0.005438593481843924
egfr ZNF430_3 chr19_21020746_C_T,chr19_21033730_G_A,chr19_21022725_C_T 0.006039060973644978,0.0017404412233575466,0.0032443389741318627 0.0014493947676260713,3.875366882434858e-05,7.931044376997757e-06
egfr SLC41A2_2 chr12_104866497_A_G,chr12_104805360_A_C 0.006042414055759166,0.003878181222682689 0.04584324420776458,0.01814258498012539
egfr ARHGAP5_2 chr14_32092970_T_C,chr14_32154828_T_C 0.006122997092230283,0.00899034241039037 0.000109609141495362,0.0028505632724505807
egfr CTSB_5 chr8_11848168_C_G,chr8_11853379_G_C,chr8_11847933_G_T,chr8_11852665_T_C,chr8_11848361_G_A 0.006170091093918575,0.013883502523880249,0.013105854756963943,9.23481096080534e-05,0.0030280965583678638 0.010885538500044391,0.006363373856765906,0.00949712914495799,0.00465817682934427,0.02101769256107376
egfr INTS10_7 chr8_19824136_G_A,chr8_19825034_A_G,chr8_19825081_A_G,chr8_19832122_T_C,chr8_19823225_T_C,chr8_19823468_C_T,chr8_19820404_G_A 0.006249656348718163,9.755626466214517e-05,0.0032595992956769558,1.3994534854585697e-05,0.01825573585413804,0.0007017951945376175,0.0019656324021710553 0.004251571736144285,0.006724158153343274,0.02600076241538477,0.015595096037435119,0.0063513471360198154,0.004329630966639476,0.012844960200188478
egfr CHAF1A_3 chr19_4406163_G_A,chr19_4442339_C_T,chr19_4422720_A_G 0.0064074940660708,3.653207387854824e-06,1.4819698101788669e-05 0.0008752119921859383,2.142565869765625e-07,0.024620616607439628
egfr MDC1_2 chr6_30711769_A_C,chr6_30704316_T_G 0.006463206071893797,0.0019882207404644673 0.0020262441930086923,0.0013599597266763966
egfr DYRK1A_3 chr21_37420484_TGGG_T,chr21_37506256_A_C,chr21_37505200_T_G 0.006470184695707864,0.007166152604563953,0.0018009306683812387 0.004141112427822946,0.023367448843283026,0.006729513952629108
egfr SMPDL3B_2 chr1_27949055_T_G,chr1_27956116_T_G 0.00686332660241626,0.005864140422713154 0.0015905760666496795,0.0137996143213625
egfr EVPL_2 chr17_76023471_A_C,chr17_76023459_T_G 0.007000637494837062,0.0007672223327735785 0.005291001652021031,0.010508474240463184
egfr TOM1L1_5 chr17_54914767_TA_T,chr17_54930294_T_G,chr17_54936619_A_G,chr17_54936871_A_ATTAAG,chr17_54949462_TAAAAG_T 0.007038383297527345,0.0050109411285773646,0.00021710780579647815,0.00028231096361921765,0.00012667235189768908 0.04878127910267323,0.03275406093703293,0.014250045450198362,0.01731618533169237,0.009468652758198769
egfr PPP6R2_6 chr22_50437806_T_C,chr22_50444323_CT_C,chr22_50438097_C_G,chr22_50439767_G_A,chr22_50444161_G_A,chr22_50435068_C_T 0.007051784222833177,0.023269327181446267,3.439001444964778e-05,7.581666224780631e-05,3.643039740627613e-05,0.0008291832461198612 0.0008491344323951777,6.519259302157606e-08,0.02539141451283096,0.0453099522882128,0.048741469250829166,0.04553862958411738
egfr DAB2IP_2 chr9_121772524_T_G,chr9_121760326_A_C 0.0070915742180131395,0.007778717869708281 0.02191587566106909,0.01751891495836218
egfr WRN_8 chr8_31096749_C_T,chr8_31124455_G_T,chr8_31141606_C_T,chr8_31167122_C_T,chr8_31068263_T_G,chr8_31096728_GT_G,chr8_31081188_G_A,chr8_31154721_C_G 0.0071839350828315045,1.9744778112725726e-06,3.7195190403966525e-05,0.0005948019596535545,1.4689350346055224e-05,0.009117602293234885,4.455137121499956e-06,0.015467137724934844 0.015593392890488516,0.0002318154176456728,0.000309347551379363,0.008293074145156037,0.01874901447901884,0.0010432049093381938,0.02919802325158393,0.008229549817641594
egfr SEC63_2 chr6_107876794_A_G,chr6_107876670_C_A 0.007209006342709896,0.0019416198580565237 0.0015670897229372802,0.02957724273333363
egfr MAU2_6 chr19_19336127_G_A,chr19_19338794_G_A,chr19_19338877_G_T,chr19_19342712_T_G,chr19_19342751_C_A,chr19_19344019_G_A 0.007212671514055286,0.000960361991019274,0.0009059794395416026,0.0008876467494768484,0.0008876467494768484,0.001002378802893851 3.528738486135461e-07,1.9278481053706903e-06,3.174590417336852e-07,1.942933711490239e-07,1.942933711490239e-07,3.6691446641905493e-07
egfr CDCP1_3 chr3_45091085_A_T,chr3_45091145_T_C,chr3_45095296_A_G 0.007224118191596861,0.003521903825993761,7.820303910973087e-07 0.01528693636083844,0.0025128061409562703,0.034457598045182634
egfr NKTR_2 chr3_42630618_G_C,chr3_42636885_C_A 0.007397151891706983,0.004629789663279317 0.0027059941965995107,3.766470432445502e-05
egfr GSN_3 chr9_121321305_A_C,chr9_121326911_A_C,chr9_121282717_C_T 0.00754758939906495,9.99197364773904e-05,0.008701863324990747 0.0036521684936499576,0.014858234163842209,0.04144642618836994
egfr MTR_3 chr1_236885200_A_G,chr1_236897645_CT_C,chr1_236812798_T_G 0.007571674596968512,0.00019121697493807043,0.006559116282295972 0.013876029031175869,0.019195378846888603,0.028819324921187783
egfr DNAH1_4 chr3_52395506_T_G,chr3_52398167_T_C,chr3_52375405_A_G,chr3_52394972_C_A 0.007807586400497246,5.188940804112937e-07,0.028701683809333287,0.04830043674512241 0.020152041638368784,0.04601002692990365,0.006840623405991567,0.005200470677837818
egfr NDUFS7_6 chr19_1388539_C_T,chr19_1389518_C_A,chr19_1390758_C_A,chr19_1391101_A_C,chr19_1387920_T_G,chr19_1387934_A_G 0.007902298175424828,0.01802139597834927,0.005968824663343653,2.816150837753928e-07,0.0031818920109542336,0.02651542479567508 0.004445598304300863,0.004267266689815653,0.007929745168935362,0.02277060279294577,0.0061684138287453226,0.0002841985871883526
egfr TLN1_4 chr9_35711809_G_T,chr9_35712826_G_A,chr9_35700530_A_AGTTT,chr9_35707057_C_T 0.008212937465719947,4.3027034258145176e-05,6.892028990051384e-06,1.5583116688212289e-06 0.03705209858981909,0.019628446580987526,0.03215388610263167,0.026823292872806558
egfr PARPBP_3 chr12_102164766_G_C,chr12_102165930_A_C,chr12_102195841_T_TTAAAAA 0.008239841603573375,0.048432585939195916,0.009577111829889028 9.259289657162176e-05,0.0008692851756599481,4.1069065265654646e-06
egfr FZD6_2 chr8_103300204_A_G,chr8_103318860_G_C 0.008531191339496548,0.00031326302687667253 0.02679919317294273,0.01810032651868897
egfr ITPR1_10 chr3_4651972_C_T,chr3_4673329_A_C,chr3_4712028_A_G,chr3_4814550_G_A,chr3_4645814_T_A,chr3_4652327_G_A,chr3_4653996_G_A,chr3_4717319_C_T,chr3_4652159_T_G,chr3_4516699_C_T 0.00859416859519535,0.0036591352908788796,0.002472562485621646,0.0007540687837519184,1.174056333280529e-06,1.6973582056331476e-05,0.00018073915749960563,0.025102582779245618,0.0060202139881954326,0.01485572695651343 0.02221500748211688,0.028276024726866744,0.031417032356405285,0.020003750528966732,0.02165052204755015,0.04826424992681114,0.04219875731949733,0.00956347809995603,0.032544122080128725,0.04748127629652489
egfr LAMA5_11 chr20_62307035_T_C,chr20_62308863_T_C,chr20_62315711_A_C,chr20_62325178_T_C,chr20_62327158_G_A,chr20_62327540_T_G,chr20_62310033_T_G,chr20_62327738_A_C,chr20_62332572_T_G,chr20_62327734_A_C,chr20_62345568_A_G 0.008632920752406494,0.014295751572041776,0.02909024968748458,3.555862255130917e-08,2.9240346346210547e-06,0.00712140384613043,1.5666190990300454e-05,0.019613193736301028,0.03355260503997278,0.034148373295335904,1.0743773421509558e-05 0.008839994985818419,0.003401604212977075,0.0003409731985327621,0.010970601799299722,0.037454561614064526,0.04839717926265442,0.00011553533752570969,0.00016041497097470358,0.00634985461358608,0.00014957483336764524,0.02125937044218393
egfr MAPRE2_2 chr18_35132001_G_GT,chr18_35070377_A_G 0.008697538540744818,0.0008936827603968188 0.027950082818089944,0.013874344261478143
egfr PCM1_14 chr8_17938873_A_G,chr8_17938874_C_T,chr8_17947156_G_A,chr8_17957171_G_C,chr8_17962063_C_T,chr8_17962252_A_G,chr8_17972247_C_CAA,chr8_17993739_C_A,chr8_18010736_C_A,chr8_18014089_T_A,chr8_18014110_A_C,chr8_18027462_G_A,chr8_18027582_T_C,chr8_17963329_A_C 0.008797381653836422,0.008797381653836422,8.592105380343799e-09,9.956680768337928e-13,6.195811157969624e-08,1.8937727055349602e-07,0.012906783621554044,0.00024859599240286334,0.0005752822575338514,1.5559989504674227e-05,2.7991275648315256e-08,1.0617795138512517e-06,1.3096196909220091e-08,0.013270249004941498 0.0286880097933444,0.0286880097933444,0.005755604603604279,0.003664181277087841,0.003941798080137453,0.000146676782393952,0.003377252281952908,0.0004892784845984415,0.01725609483145887,0.00016889400218637822,0.0005696202104790463,5.9466930864771254e-05,0.0032089265919612235,0.004113314671783447
egfr LAMC2_2 chr1_183207851_G_T,chr1_183207864_G_T 0.0090311817049441,0.0010913836051824374 0.02500420336879176,0.034260068788679536
egfr FAT1_2 chr4_186706505_TAAAAAA_T,chr4_186628213_A_C 0.009108698459398929,0.008101657943453211 0.02585265305545377,0.01860566173117391
egfr SQSTM1_3 chr5_179833009_G_A,chr5_179822433_T_C,chr5_179832842_G_C 0.0096926694417795,0.004856219591816439,0.0277352874184494 0.03979973429187952,0.0024949336391905503,0.0024314650981475784
egfr CCDC25_3 chr8_27736133_T_C,chr8_27740525_GA_G,chr8_27740655_A_G 0.009721303652590912,0.0012870249285031976,0.019736174159448082 0.012214514779241077,3.013644227200994e-08,0.009242113446549792
egfr PTGFRN_2 chr1_116949272_C_G,chr1_116985006_T_C 0.009786238032301352,0.0007152254747991232 0.04386987327886,0.015007302908998025
egfr CUEDC1_2 chr17_57872703_C_T,chr17_57873465_G_A 0.010263213673294223,0.0029406902030506186 0.0013582824059236026,0.00965828204249475
egfr POLR3D_5 chr8_22247989_T_C,chr8_22247116_G_A,chr8_22247770_T_C,chr8_22250473_A_G,chr8_22245170_T_G 0.010361813952662016,0.040760845043798406,0.010265363996485286,0.010265363996485286,0.03202227743017228 0.0015081231813274575,0.0005996811951877831,0.0014851724380103976,0.0014851724380103976,0.0034846025589736784
egfr MDN1_10 chr6_89661483_G_A,chr6_89662267_C_T,chr6_89680724_C_A,chr6_89712908_G_C,chr6_89728912_G_T,chr6_89745710_T_C,chr6_89819438_A_G,chr6_89819440_C_G,chr6_89819446_A_G,chr6_89656810_T_C 0.011142557737209857,0.019733545814518076,0.00671054318104286,0.009319633314546674,0.029067614736169964,0.014718502010945343,0.03726926768860217,4.658109373380921e-05,0.00043794075690144836,0.001077236984005633 8.702195141061847e-05,4.241840867716095e-05,3.792323014139115e-05,0.002381685713249437,0.003051989681616468,0.0024784505977437274,0.002315253787970113,0.00030565312846269634,0.0005358395597195241,0.045388379703494304
egfr ZNF407_5 chr18_74635526_T_C,chr18_74881076_C_G,chr18_74881080_A_C,chr18_75064165_G_A,chr18_74881141_G_A 0.01132130975657727,0.03691411059827635,0.002564188916256107,0.00027018930993972406,0.0024107982547803396 0.0030145474545959137,0.009890224680183182,0.03975077518004473,0.0037574487440396095,0.018926593122392126
egfr C18orf21_2 chr18_35977490_T_C,chr18_35973023_A_G 0.011570265284110644,0.04350573719131977 8.814319140246499e-05,0.009001638536085271
egfr DNHD1_2 chr11_6566998_G_A,chr11_6502909_T_C 0.01157615377505105,0.024706472106323003 0.003441011845932656,0.0051368432267910715
egfr KCNQ5_2 chr6_72622312_C_G,chr6_73194868_A_C 0.011667048329227513,0.008556892857902195 0.005821769162034106,0.002035847347947271
egfr USP7_3 chr16_8916969_T_TA,chr16_8921401_T_C,chr16_8919178_A_G 0.011921515809972538,0.0007259106255980508,0.00985787434616614 0.007935686984078177,0.03489258945527392,0.01271404693174776
egfr KRT19_2 chr17_41524128_T_G,chr17_41524420_C_T 0.012145831162385651,0.02329208372328466 0.006794604788851329,0.0075159453943370955
egfr CHD4_2 chr12_6598281_A_C,chr12_6596093_T_C 0.0122076861217219,0.004382346617449564 0.0023450404288739924,0.005341196474657028
egfr TRIO_5 chr5_14270972_A_C,chr5_14380924_T_A,chr5_14287139_AT_A,chr5_14485052_GTTTT_G,chr5_14304660_GA_G 0.01228372579415868,3.324291735916414e-05,0.01866091088461598,0.0021188750196952637,0.001000539371629746 0.0041763005884629285,0.009266068007448034,4.1269944199248776e-05,0.00011802420018250479,0.0066869864395857175
egfr NR2F6_3 chr19_17232488_A_G,chr19_17240807_T_C,chr19_17240813_T_C 0.012426826069594731,0.008405600723765323,0.0104569397340928 0.0005711072972571918,0.006907234943082266,1.728226736131038e-05
egfr HNRNPH1_2 chr5_179621204_T_C,chr5_179614784_GAAAAA_G 0.012466319116509934,0.03611121611218025 0.0008981889773064157,0.009729395921872941
egfr POLDIP3_2 chr22_42585672_T_C,chr22_42585502_A_C 0.012811765150489051,0.04394982419601543 3.6252104008481515e-06,0.004353728585767742
egfr CASKIN2_4 chr17_75501358_G_A,chr17_75501713_T_C,chr17_75503616_T_C,chr17_75508335_T_C 0.01313679969802845,0.0005650477736965628,0.0014275310574789414,0.004128633364054907 0.002427426610400476,0.00023272703416067725,0.00689117538932749,0.024705224854909082
egfr ZNF557_3 chr19_7083618_A_G,chr19_7083750_A_G,chr19_7074861_G_A 0.014332802500416091,0.016198364111666076,0.009991664044269358 1.6329734686551152e-07,4.640996358288638e-07,0.019872633283012617
egfr BPTF_2 chr17_67825365_C_T,chr17_67911547_C_G 0.01437455334956587,0.027807620738219758 2.5754103071800682e-05,0.006958200054189394
egfr UGGT2_3 chr13_95833163_A_G,chr13_95853698_T_C,chr13_95860933_T_C 0.015116310313098947,0.037400522782126695,0.007496186466991611 0.000224596103770692,0.0011686091908779301,0.002068524896740717
egfr FNDC3B_3 chr3_172362611_AT_A,chr3_172328905_GT_G,chr3_172286041_CTTTT_C 0.015509630370521969,0.002266663581871069,0.0003779941256659541 0.0007669696976411361,1.7757436099968484e-05,0.031871180713847265
egfr CLIP1_3 chr12_122328152_A_C,chr12_122328157_C_T,chr12_122328162_C_T 0.01554438347868009,0.004768276278894758,0.002667521200669866 0.002481037749459045,0.041472618812521435,0.048511002649469816
egfr TNKS_6 chr8_9680125_G_A,chr8_9720284_A_AT,chr8_9720294_C_A,chr8_9735571_A_C,chr8_9751720_A_C,chr8_9766458_A_C 0.015553063070783985,0.021640953132470588,0.009525586921605824,0.006640140033620625,0.006977786341777385,0.032727629530903864 1.1196019412041484e-09,6.428366457977679e-07,9.234432766615335e-08,4.809045747636942e-06,0.019396751254115357,9.650265166072016e-07
egfr NAA15_2 chr4_139349721_G_A,chr4_139349435_AT_A 0.01573160679440035,0.003429044586968857 0.0002098904518747522,0.002911064627846368
egfr RANBP3_5 chr19_5928023_T_G,chr19_5928174_T_C,chr19_5915583_A_G,chr19_5925847_A_C,chr19_5978199_C_T 0.01583040778996785,4.474815722770587e-05,5.7769976083466666e-05,0.0026896515436457035,0.007526230369901563 0.009045897483820205,0.0004179910655369823,0.03657225828634877,0.013386174688145538,0.043887995871297616
egfr CCP110_6 chr16_19536035_A_G,chr16_19536181_C_T,chr16_19545945_C_T,chr16_19541861_T_C,chr16_19536052_C_A,chr16_19548016_T_G 0.016159655378318708,0.04502177918333454,0.008022125809200288,4.851993209582035e-06,0.0004153878057481152,0.025513237898367132 0.00016378049017362915,0.0005567133937571787,0.0006179187799490345,0.015929257083152543,0.0007996357401027085,0.009536820248258198
egfr ANXA11_2 chr10_80166029_C_T,chr10_80161797_T_C 0.016605419991514502,0.0051164435438795204 0.007800123858178394,0.0013053025194313356
egfr PLEC_5 chr8_143935900_T_G,chr8_143916360_A_G,chr8_143918739_A_C,chr8_143929244_A_C,chr8_143934289_T_G 0.01665471808934805,0.0034243187807631525,0.0018067465091272969,0.0008521926558447601,0.0001319263889148404 0.0004960012901022363,0.00910116635228719,2.138708286444241e-05,0.04249632659180479,0.008202162742211878
egfr PDHB_5 chr3_58429863_C_A,chr3_58427942_G_T,chr3_58430808_C_T,chr3_58431043_T_TTTA,chr3_58431689_C_T 0.016694590509161198,0.0034915452482365546,0.0014468501934601355,0.00012132584593612988,0.0014468501934601355 1.9636106867401007e-06,9.607912469556515e-06,1.1215690852590127e-06,4.480434017438887e-06,1.1215690852590127e-06
egfr ABHD12_3 chr20_25307869_C_T,chr20_25297964_G_A,chr20_25301097_T_C 0.017594886478281925,0.043687457267011516,0.004129132243776882 8.56668297363822e-06,0.00227969505884927,0.0004270759204191932
egfr TRAPPC8_10 chr18_31858057_A_C,chr18_31913653_A_G,chr18_31900873_G_A,chr18_31900876_C_A,chr18_31867505_T_G,chr18_31907633_T_A,chr18_31846589_A_C,chr18_31871211_T_A,chr18_31901115_GT_G,chr18_31858058_CT_C 0.01811627325789324,0.0017149077087971164,0.007882909715425471,0.0003097530865800165,0.0017696529343949547,0.003408008625421304,0.0025767772792916893,0.020052128513604172,0.0014872998913138286,0.009626844127190594 0.006180390175955454,0.009898646981541573,3.5402082656175115e-05,2.004341589623153e-05,0.00036773660587014015,0.0008596942505949141,0.0019258630221215085,0.0005317253240119541,0.03754796616685669,0.003048367023556882
egfr NARF_2 chr17_82488071_A_G,chr17_82485433_G_A 0.018611831902577654,0.0032741374426950077 0.0015678226483248074,0.03776328708562675
egfr RPL9_3 chr4_39454772_G_A,chr4_39458104_T_C,chr4_39457622_A_G 0.01872028096022281,0.038040018913816906,0.013766563241610607 0.004161577416808298,0.004570198384291764,4.793806278603332e-07
egfr SENP7_2 chr3_101347873_T_A,chr3_101513249_C_A 0.01892010828896953,0.027162288974149237 4.432034386075619e-05,0.00843965290168897
egfr HERC1_4 chr15_63666001_A_C,chr15_63666004_T_C,chr15_63754569_A_C,chr15_63706823_T_C 0.018947416114520832,0.012801946597404643,0.009094911651776984,0.0001905333488051304 0.0009552551098417773,0.0050390069990103115,0.007343118479360836,0.005050957906342418
egfr DOCK11_2 chrX_118627539_A_C,chrX_118580020_T_G 0.019238892996198773,0.002446966159681028 0.00012436903410890539,0.02379391735060052
egfr KLF5_3 chr13_73063987_G_T,chr13_73062772_A_AGTGT,chr13_73063986_TG_T 0.019354403860496208,0.037567154465037694,0.006314572274949971 0.008502737493358522,0.0008455054702052634,0.045197394376435635
egfr FERMT1_2 chr20_6119441_A_G,chr20_6076305_T_G 0.01953104506649206,1.5328575507414378e-05 0.003951008923557318,0.005589077504505465
egfr CGGBP1_2 chr3_88056114_A_C,chr3_88058700_T_G 0.019690640293771062,0.0001488078729312028 0.0013325718879930134,7.124415972693971e-06
egfr CEP85L_4 chr6_118511157_T_C,chr6_118565452_T_C,chr6_118565798_G_T,chr6_118652790_A_G 0.019951442705337254,3.4006295145334306e-05,0.006640489210238536,0.005690521125333515 0.0019936945989450267,0.031500707148776626,0.011376444437361329,0.01248838915032558
egfr TCF4_7 chr18_55585157_G_A,chr18_55464257_C_A,chr18_55463971_TGTGTGTGA_T,chr18_55275657_A_G,chr18_55403517_A_C,chr18_55461237_G_T,chr18_55234488_T_G 0.02005132938992895,9.139603483849228e-07,0.003907248287482544,0.04979553061082194,0.027277557605803925,0.004036463102105114,0.0005592100190603741 0.002362550141751555,0.032420073593804284,0.03333184670009802,0.0013930308437610063,1.5397131093463103e-06,0.04572000946513434,0.005926553123167896
egfr DQX1_2 chr2_74518953_C_T,chr2_74519195_A_T 0.02016550460713128,0.02345411840768387 0.001543466936969916,0.0012259823356569838
egfr UBR5_3 chr8_102327653_A_C,chr8_102288240_T_C,chr8_102311353_A_G 0.02158342295983112,0.000182245886028422,0.002891650419980013 0.0014448817758050778,0.041616237854309936,0.00926532742682097
egfr UBR7_2 chr14_93227076_C_T,chr14_93227060_C_A 0.021764228343538142,0.00036547494521639036 5.580051554471299e-12,0.004489348973894868
egfr PRDM15_6 chr21_41804523_A_G,chr21_41857170_C_CT,chr21_41878737_C_T,chr21_41878845_C_CG,chr21_41879218_C_A,chr21_41860296_C_G 0.022209828018085867,0.0016831430872538335,0.001963497325920565,4.181886700329235e-07,0.0008539747138144563,0.003762939149636617 0.0024789131706555692,0.04559041805735448,0.004333100546220035,0.0014981405701937028,0.007033127481264185,0.003918924565748825
egfr HPS4_3 chr22_26464303_G_C,chr22_26466187_C_A,chr22_26466246_T_C 0.023338960947810374,0.0034082024391394804,0.008599880725164986 0.00049975228288003,0.013660798942983977,0.013660798942983977
egfr KIF13A_2 chr6_17759921_G_T,chr6_17779691_GA_G 0.02351576585497226,0.0016700241845674759 0.005082432403932738,0.03874282920193672
egfr SLC35B4_8 chr7_134294793_A_T,chr7_134294800_C_T,chr7_134294826_A_G,chr7_134295043_T_C,chr7_134296475_G_A,chr7_134299375_A_G,chr7_134300126_G_A,chr7_134304791_A_G 0.02373113198705864,0.01698627709999008,0.006372984518535906,0.02196618128109366,0.0003440877501955943,0.006567115319239084,3.4006295145334306e-05,0.005046500727253695 0.007700956159853255,0.0033988992551489622,0.003846947305778054,0.003846947305778054,0.0005322435434420271,0.004732359355015072,0.00026123770283039777,0.0007109966209961128
egfr L3MBTL2_6 chr22_41213686_C_T,chr22_41221314_G_C,chr22_41217184_C_T,chr22_41217299_C_T,chr22_41221156_T_TG,chr22_41214238_A_G 0.02384699817673188,0.036506965435244586,0.00046243520821700383,0.0014542660494230402,0.0048712846790899276,0.009223190722677185 0.0010787186334203051,0.0001832674707524145,0.0038205423576211455,0.004209694792725524,4.2157738222413464e-06,0.04965109007915304
egfr RAI14_6 chr5_34810866_G_A,chr5_34811689_T_C,chr5_34812303_A_G,chr5_34812384_A_G,chr5_34814795_A_G,chr5_34826376_A_C 0.02398248389974741,0.003021738485801497,0.03016889098915158,0.04699754955019005,0.007276272312251042,0.03015590631046501 0.005930385895234786,0.02067007422009637,0.008963944637711066,0.0075054618188784596,0.002646842318515723,0.006485048570616563
egfr ARHGEF10L_2 chr1_17632421_T_G,chr1_17581112_C_T 0.02441616386812752,0.008405600723765323 0.00740919250255517,0.019746113249432044
egfr WFS1_2 chr4_6300580_T_G,chr4_6301666_T_G 0.024665242803626187,0.008957131401361508 0.0005139212842413073,0.005931412638336574
egfr TPP2_5 chr13_102645085_CT_C,chr13_102649187_G_T,chr13_102629949_C_G,chr13_102634223_C_T,chr13_102645085_CTT_C 0.024741402723073853,0.028415295283801194,0.001061432461116305,0.03296472481201721,0.00032041277623460525 0.0017617933204615989,0.0003388682906380855,2.491492385425685e-05,0.0010859815068279958,0.04128722708381896
egfr DPY19L3_3 chr19_32480317_C_T,chr19_32482171_C_T,chr19_32457979_A_AT 0.02575962131883935,0.041529928834727996,8.068330723796263e-08 0.00488668851811109,0.00656763144792808,0.0003669711749463792
egfr SYNE1_13 chr6_152149487_A_G,chr6_152310394_A_C,chr6_152302141_A_G,chr6_152350340_A_C,chr6_152350418_A_G,chr6_152350784_G_GA,chr6_152350840_A_G,chr6_152354719_A_G,chr6_152373049_T_C,chr6_152416413_T_G,chr6_152352408_C_CT,chr6_152326359_G_A,chr6_152167902_T_G 0.02589202251594358,0.0068225672761204,0.018111885168250186,0.001534088782688901,0.00015349542079229654,0.003947934300958396,0.009039115199453142,0.0032281218393380826,0.034085027891066176,0.0074217808535962425,0.0003084243419514754,0.04013949097321684,0.007925318609942202 0.0022312687521415984,0.000300569048618415,0.000916091757381376,0.04334315784101184,0.025133645776259043,0.015037738599618973,0.049886685026608805,0.04777964311542563,0.003302156741579197,0.012499408296212235,0.002950466518563949,0.002843434249435789,0.025194372743123864
egfr BAIAP2L1_2 chr7_98312162_T_G,chr7_98310492_T_G 0.02645273506751201,0.017881464475754172 0.002108350377110309,3.1631490207583316e-05
egfr CXXC1_4 chr18_50283881_C_G,chr18_50283981_A_G,chr18_50282775_A_C,chr18_50285505_A_G 0.02700492420991353,0.00030830634455756233,0.00020363998830215009,0.024668590953954232 0.0054045514118498715,0.0069760254674185035,0.00041677651706905364,1.2396826716404366e-06
egfr ITGB5_3 chr3_124769064_T_G,chr3_124796789_C_T,chr3_124809087_T_G 0.027271474201973192,0.0030628908663900517,0.02459057498205289 0.0006588536356118503,0.03655295537599197,5.4585187494895796e-05
egfr BRD4_2 chr19_15255220_T_G,chr19_15264730_T_G 0.02738257500091704,0.0024688743871748233 0.003128882089479218,0.012931811845921107
egfr TUBGCP6_3 chr22_50218683_C_T,chr22_50226183_A_G,chr22_50216669_A_G 0.02873848846989375,1.7193787546395546e-05,0.001425645880342349 0.0032493001194240914,0.004608803965780261,0.0053976890998902035
egfr SH2D4A_2 chr8_19373444_G_GTA,chr8_19373444_G_A 0.029078590360841292,0.0012205889084294006 0.0029847738366696104,0.03439931765423256
egfr UPP1_3 chr7_48088999_G_A,chr7_48108129_C_G,chr7_48108147_T_G 0.029144965782620207,0.015833254501378846,0.01682115524692246 0.0003765748447247093,0.0002337913556195707,0.0015081620173450355
egfr WDR48_5 chr3_39068755_C_T,chr3_39069649_C_A,chr3_39066494_T_A,chr3_39077046_G_A,chr3_39052175_T_A 0.030420442989910295,0.044145461001922535,5.492585713676155e-05,0.00014207366024108895,0.015418219237359813 0.00013091692663621323,1.1291180538837308e-09,0.030704581537927867,0.04365312343408456,0.002516254064872987
egfr PDS5B_5 chr13_32741072_A_T,chr13_32758091_C_T,chr13_32675925_C_A,chr13_32710010_G_T,chr13_32652145_GT_G 0.030726392282429425,0.00123879071402958,0.0006856670147522433,0.002121608222392312,0.0007921211551638221 0.001639201016530517,0.0023301391981286807,0.004241708828197667,0.017388913859398773,0.002787725341881676
egfr AHNAK2_13 chr14_104948863_G_C,chr14_104950348_C_G,chr14_104952007_T_G,chr14_104952054_C_T,chr14_104954590_A_G,chr14_104955559_A_C,chr14_104949306_T_C,chr14_104950948_C_T,chr14_104946565_A_C,chr14_104949318_G_C,chr14_104953856_A_C,chr14_104944923_A_G,chr14_104945888_T_G 0.0308328381135858,0.016748316074642184,0.03839823545317707,0.03874915731384604,0.0072096008154851265,1.5768275144985015e-05,0.006402387188591212,0.006209224175079767,0.02197650841839336,0.005813098445302893,0.024214266407806717,0.0185888935199706,0.0006623043768660483 0.0037872773041585602,0.0010008042001551844,4.242877237542688e-05,4.758634079373864e-05,0.044213954062984784,0.00506490504122054,0.005256944789299486,0.009057439080581924,0.006657596405885244,0.015474300784924832,0.003500316527332319,0.004782218518041667,0.009471254952683202
egfr PSIP1_4 chr9_15469426_TA_T,chr9_15472613_GA_G,chr9_15478664_T_C,chr9_15473904_C_CA 0.03090002089985741,0.010885733995064931,0.0036412739882121493,0.019522544533840024 0.0021167351616768765,0.002781333210996778,0.04454350703768868,0.047598542315053116
egfr ANK3_2 chr10_60140286_C_G,chr10_60140292_G_T 0.031415751059474716,0.004915637551152243 0.006334167714527676,0.025015110862319518
egfr PLEK_3 chr2_68380987_A_C,chr2_68388306_A_G,chr2_68380161_C_G 0.0317726416239668,0.008640427676032429,0.003025481684231003 0.0018651167043750433,0.012112306050675708,0.004442991541746456
egfr HMGB1_2 chr13_30463652_C_G,chr13_30465849_T_C 0.03226480417721332,0.0001648093940653516 0.0005823170484383475,1.5385023502599213e-07
egfr ACTN1_2 chr14_68890121_A_G,chr14_68904620_A_G 0.032894585296185316,0.002540635063275344 0.0030504600602986385,0.01924890787722053
egfr FAM193A_2 chr4_2662705_A_G,chr4_2659865_A_C 0.033419216681695084,0.04113816735227994 0.006119225115333783,0.002421422710409682
egfr ALS2CL_3 chr3_46688267_C_G,chr3_46671861_C_A,chr3_46683906_C_A 0.03379224538431711,2.315014453759593e-05,0.005940717099935289 0.0010458636942191153,0.016517080453509674,0.048512125386189216
egfr SMARCA5_3 chr4_143521582_C_T,chr4_143514027_G_A,chr4_143513907_T_G 0.03389913212461259,0.0005336701932334038,0.00047650766195259835 0.009752627346239709,0.0006586181076668231,0.004556295949163353
egfr TMBIM1_4 chr2_218278506_G_A,chr2_218278604_T_C,chr2_218279426_G_A,chr2_218282145_T_C 0.03396031249525595,0.02844679337110864,0.0068961961974542295,0.0018492744109954121 0.002273449490648745,0.0012042001777173455,0.0022480783740468167,0.030530266212098117
egfr ZNF236_5 chr18_76959812_T_C,chr18_76968158_T_C,chr18_76968252_C_T,chr18_76936580_G_T,chr18_76968514_A_G 0.034863364756142684,0.00544264119615534,0.007385442293655849,1.258127500782992e-05,0.001396157570840323 0.004671655781344212,3.359123080186937e-06,3.816383122507129e-05,2.2508576141383803e-05,0.00014020410621502926
egfr DMAP1_3 chr1_44213884_A_G,chr1_44219323_T_C,chr1_44214487_A_C 0.03508585380179657,0.0001543183975019544,0.000996146741984629 2.797176359518221e-05,0.04898236049763705,0.041077293102317024
egfr GIT2_2 chr12_109951210_A_C,chr12_109952676_A_C 0.038020170939281527,0.044654978525331915 0.0015711134341594402,0.0073535263645836966
egfr PBRM1_4 chr3_52642049_CA_C,chr3_52642048_AC_A,chr3_52642050_A_T,chr3_52658412_CTT_C 0.03826328245790342,0.003417708183485354,0.003417708183485354,0.004371631368875628 0.0014123627803440367,0.00010786476378721626,0.00010786476378721626,0.04797045127180218
egfr SEMA4B_3 chr15_90230550_C_T,chr15_90219735_T_G,chr15_90223369_T_C 0.0382907038385724,0.00014017436078508742,0.003606528003523896 0.003576989974401659,0.0196110620734337,0.012423711849739305
egfr CDH1_2 chr16_68823310_T_G,chr16_68810107_C_G 0.03866739925480673,2.3568872507011226e-05 0.0025541666878341144,0.0045199561560194616
egfr PAK4_3 chr19_39176740_T_C,chr19_39178411_T_C,chr19_39178960_A_ATG 0.03964657176847531,0.0031968419187330646,0.00031366512220605466 0.0005253339462112416,0.012050619287225093,0.04112372072532399
egfr KDM5A_2 chr12_310904_G_A,chr12_323658_C_A 0.040083104628847975,0.03485434053230182 8.99232571405919e-08,4.775460326696479e-06
egfr CHMP7_4 chr8_23249152_A_G,chr8_23260130_T_C,chr8_23260642_T_C,chr8_23255149_C_T 0.040858161657175214,0.0021955959993491484,0.001347026932454516,0.005979199546716722 0.00985156252549634,0.007951126415472621,0.005852678740537498,2.528028640474925e-05
egfr FASTKD1_2 chr2_169557305_CA_C,chr2_169557305_CAA_C 0.04142328785089491,0.016746895905411573 0.00016945881737810868,0.003864236188058555
egfr MRPL39_5 chr21_25587877_T_G,chr21_25588774_T_C,chr21_25594005_A_G,chr21_25603938_A_G,chr21_25607316_G_A 0.04194490101459973,0.01937493996228174,0.01845646940649424,0.02800309093409305,0.00630118834188515 5.7418126731545284e-08,3.6929628125728576e-08,2.5701269842959545e-08,1.0577675519010665e-08,3.688861166466308e-08
egfr PON2_2 chr7_95406313_A_C,chr7_95406317_T_C 0.04295809677939748,0.03518057074232925 9.367508145310504e-06,9.041805671182428e-07
egfr ATP9A_2 chr20_51608625_A_C,chr20_51627544_T_G 0.0453107586125816,0.0033064577154371753 0.0016205979394364285,0.046011362965187
egfr SYNE2_3 chr14_64189964_AT_A,chr14_64022731_CT_C,chr14_64122119_G_A 0.04554515566635235,0.0259958042872378,0.005029743152006167 6.34029580306576e-05,0.003556496243260812,0.031891035954103614
egfr EXD2_2 chr14_69236592_C_T,chr14_69236597_G_T 0.045815872520569866,0.007261223228798206 0.006743325380355538,0.009984452523516405
egfr USP22_9 chr17_21002832_G_C,chr17_21002938_C_T,chr17_21002944_A_G,chr17_21005012_T_C,chr17_21018179_C_T,chr17_21021210_G_A,chr17_21021307_T_C,chr17_21028347_G_T,chr17_21043080_T_C 0.04602479247359704,0.008276359973551,0.0003145539245206166,0.00013159988064048868,0.00017641068386537028,0.00018037842009303046,0.002766843921558569,0.00965100020152009,0.0021915580128042123 5.2405530742318296e-05,0.0001522332352001979,0.0010200867803667195,0.0002608036035294038,0.0002258154609608441,0.00012857609143244398,4.777859944106238e-06,0.001140393407840919,0.01642994041963463
egfr R3HDM1_2 chr2_135621624_GT_G,chr2_135661361_A_C 0.04643229751040803,0.01096218490346052 0.007933574405897037,0.00075038338644858
egfr LAIR1_2 chr19_54364274_T_C,chr19_54364717_T_C 0.04672350230262375,0.015465209925053043 0.008257714587898193,0.006617848488520711
egfr EVL_5 chr14_100126634_T_G,chr14_100132827_G_A,chr14_100126622_G_A,chr14_100132645_T_G,chr14_100135917_A_C 0.047372429474904484,0.0016660544745078804,0.004134369004838065,0.00016640135361204822,0.0031029134247096963 4.756430435799507e-06,0.00563219201718044,0.01997007957497231,0.026704266687616097,0.006469582595095918
egfr RNF123_2 chr3_49714152_C_T,chr3_49700145_G_T 0.047756940070976237,1.1366734297895966e-06 0.00816572334990732,0.0037608177292696564
egfr DNMT1_2 chr19_10162649_G_A,chr19_10143809_G_C 0.04804143143713783,0.022663915935835485 0.0013474327860987167,0.0054179883970128856
egfr BTBD16_4 chr10_122275013_G_T,chr10_122275188_T_C,chr10_122285973_C_T,chr10_122291060_G_A 0.04876523124872777,0.04476796806488366,0.00874169822078938,0.03049550442980961 0.0003520007001970831,0.00020893956494733148,0.0013169765604353282,0.0026073441109972398
egfr FUCA2_2 chr6_143504166_C_A,chr6_143507227_A_G 0.049200639651661375,0.029895339238934462 0.00639339868461808,0.0054745403112583324
egfr PPIP5K2_3 chr5_103201499_T_G,chr5_103201584_A_G,chr5_103201656_T_C 0.04957254295359858,0.00015517194478671765,9.016600091479696e-05 0.00015030812167049831,0.020151832289907558,0.029631285544831236
egfr TIMM44_3 chr19_7932571_A_G,chr19_7932574_T_G,chr19_7932577_T_G 1.3167297251695571e-05,0.0003422957438462025,0.0005904858316322034 0.02845639919448445,0.006688970144575634,0.006057634937627619
egfr MEX3C_2 chr18_51196847_C_T,chr18_51196775_CGCCGCCGCG_C 1.329885109524148e-10,0.0022225090338153708 5.249784413332885e-07,0.01963887463995091
egfr MTUS1_3 chr8_17754377_G_A,chr8_17755366_A_G,chr8_17721812_A_C 1.3576985363683765e-05,1.972258766974004e-08,0.02629101974751153 0.001701316781434502,0.026616233857667596,0.002181030051469235
egfr CTSH_2 chr15_78922969_A_C,chr15_78939184_A_AG 1.4037598311677378e-05,0.0001924278188105154 0.010345021977573308,0.0344244477250216
egfr IL18_3 chr11_112150193_T_G,chr11_112155193_G_C,chr11_112155192_T_C 1.461260124702572e-05,7.96641505141555e-07,0.03134154150698633 0.012472744364369587,0.011978242096605442,0.007248539214372238
egfr ZNF654_2 chr3_88139270_G_A,chr3_88140191_T_C 1.4751691487034687e-06,2.0819038805248358e-07 0.0018019171147236148,0.0019048877551503765
egfr ZNF589_6 chr3_48241161_TGCGC_T,chr3_48241205_A_G,chr3_48257949_T_C,chr3_48268338_C_G,chr3_48286239_T_C,chr3_48286261_G_A 1.6889590876869102e-06,1.1715920482680521e-06,7.920379942105592e-05,2.8491798121821795e-05,1.5027613326502343e-05,7.796162715352446e-06 0.0007986098597650371,0.0010457901523321454,4.006095509659407e-05,0.0020191705610664206,0.001627877596998014,0.0011919391649323414
egfr EPS15_6 chr1_51361249_T_C,chr1_51405766_G_GACTC,chr1_51440277_CTGTG_C,chr1_51463832_TA_T,chr1_51472751_T_G,chr1_51461237_G_A 1.6925862398730225e-06,4.1443509369940415e-05,0.031894015484001656,3.0950467922083264e-06,0.02951071302033457,0.01032478965873057 0.0002615744055786565,0.0005725418098281438,0.00017362501014406024,0.0002615744055786565,0.0045422702652321255,0.0029577065864897127
egfr ZNF266_2 chr19_9413509_A_G,chr19_9420011_TG_T 1.7177250175637761e-06,0.04040969628183889 2.6110373221371133e-14,0.004948136499581445
egfr BCAM_2 chr19_44820881_G_A,chr19_44811510_C_T 1.7938533698319987e-05,0.0006276370995178965 0.006588412083819078,0.021875016141096045
egfr C3orf38_3 chr3_88150029_T_C,chr3_88150035_T_TC,chr3_88150148_T_C 1.7996666116084316e-06,0.00014178936922186315,2.595905755446793e-06 6.57647003118834e-05,4.649030455483649e-05,7.105213671060247e-05
egfr ERICH1_8 chr8_659132_C_G,chr8_657766_C_G,chr8_658018_C_T,chr8_666590_T_A,chr8_673593_G_A,chr8_715858_C_T,chr8_659879_A_C,chr8_659039_G_A 1.8121573621263876e-05,0.0010420319235614432,0.04660176454698252,0.004834244365989843,0.007260620745344446,0.04859602375702362,0.0025352106440479803,0.002455544576447661 0.0054140514901705895,0.043640948824396286,0.0013028832620993098,0.018154111038570942,0.01865482112843118,0.00034437810537597347,0.0461414202945825,0.014420687330437538
egfr LSR_2 chr19_35267372_G_GGGA,chr19_35267177_A_C 1.823380047726112e-06,0.03651632235421607 0.0021105674130373147,0.0028831204631532326
egfr PIK3C3_3 chr18_41955191_C_G,chr18_41955194_A_G,chr18_42043978_A_G 1.9440372522869497e-06,0.0006320335833085862,0.023735103370508225 1.065744821934887e-06,0.0001342557450694381,0.00031280032152652704
egfr TAF3_4 chr10_7824594_T_C,chr10_8013652_G_C,chr10_8013913_G_A,chr10_8014532_C_T 2.0664435570944493e-05,0.004655883072306037,0.00943383216960874,0.0009463104379838767 0.03748233778862958,0.008249411816346357,0.004857051949006447,0.0014732747867095904
egfr FNBP1_2 chr9_129909080_T_TG,chr9_129923982_A_G 2.1184979283245958e-05,5.268485267589101e-05 0.013989753243576588,0.019443664939858312
egfr SACM1L_14 chr3_45719623_G_C,chr3_45722143_A_G,chr3_45722754_A_G,chr3_45723052_T_C,chr3_45731250_T_C,chr3_45731280_G_A,chr3_45732240_G_A,chr3_45737644_A_T,chr3_45705344_A_G,chr3_45706937_G_A,chr3_45713257_G_A,chr3_45712995_C_A,chr3_45689454_T_G,chr3_45739488_A_G 2.2026676208492585e-06,9.443816831049491e-07,0.0022018800476893614,3.5837125763699036e-08,4.4397997289151143e-07,1.2227532248856571e-06,1.3468374724431254e-06,7.150800554712763e-07,0.013551678428059705,0.0062092789567569535,0.0035804098855498063,0.005851841559996625,0.0028202119918153247,0.030877901512994674 2.7990310927885382e-05,2.6591646486392756e-05,0.006779520290921261,3.962907852818685e-05,1.1237814806460453e-05,4.359294069545172e-05,5.1558332133000766e-05,3.496973226569382e-05,0.0006684767742569695,7.302437009455565e-05,9.003284436221187e-05,0.005848457401461229,0.03994336344384322,5.7399601602553275e-06
egfr TXNL1_3 chr18_56602813_A_T,chr18_56626612_C_T,chr18_56651278_A_T 2.210469276189849e-06,0.022001595468935316,0.02149358538709261 4.0417773765221675e-09,2.767068005468822e-10,1.7102012334179478e-05
egfr PTPN3_2 chr9_109436866_A_G,chr9_109406452_T_G 2.248398882883789e-05,0.008436388558613016 0.022560149794550868,0.025748841495573487
egfr LAMA3_9 chr18_23861753_C_T,chr18_23915519_T_C,chr18_23946123_C_T,chr18_23949758_G_A,chr18_23954737_C_A,chr18_23954739_C_T,chr18_23939340_A_C,chr18_23713905_CT_C,chr18_23846109_T_G 2.2546401848550504e-07,0.0006963202810397933,1.582829210028338e-05,1.6534066895813288e-06,2.6769400746243374e-05,1.9933398900670928e-05,0.0008881294144847822,3.0126882423530804e-05,3.5426816292959363e-05 0.033914720695717084,0.013114315448110179,0.03066224880164858,0.025703076793439833,0.042551605063568684,0.030472466536971138,0.013225085724631118,0.01613050085470659,0.04009682047166014
egfr MTMR9_3 chr8_11284836_T_G,chr8_11309724_G_A,chr8_11322815_A_C 2.349458678158868e-06,0.0004653758499732343,0.008022838484344897 2.4088220462781546e-11,0.0074905636429132404,0.008917788804222488
egfr ITGA6_4 chr2_172427981_A_G,chr2_172427985_C_T,chr2_172484735_A_G,chr2_172490965_G_T 2.55642040821661e-05,1.1751587238624405e-05,0.002854965230943433,0.025550057038402886 0.021886276374067117,0.023752544661456654,5.351259734935356e-06,0.007174810273459709
egfr KRI1_8 chr19_10557707_T_C,chr19_10558277_G_A,chr19_10560316_C_T,chr19_10565667_A_T,chr19_10565747_G_A,chr19_10561817_C_T,chr19_10562664_C_T,chr19_10565811_G_GCC 2.6474598014609052e-05,9.523794655306364e-05,0.00011786607794266038,0.0001616270444439651,3.4012624242046115e-05,1.477271100442178e-06,1.0798436673597302e-06,6.316959826240111e-06 0.00012897741560140272,3.792910022705542e-05,2.0569928046658807e-05,2.711645177509063e-07,3.211054485740389e-07,1.8153836897508705e-05,0.0002329401807770252,0.0008450486067550477
egfr GBP3_2 chr1_89007941_G_A,chr1_89011034_A_T 2.713567196210831e-05,0.047917709012617486 1.221534419837023e-06,2.259902209453749e-08
egfr FGFR2_2 chr10_121487530_T_C,chr10_121520352_C_T 2.796050535454376e-05,9.346629403777272e-05 0.015364585786772819,0.004955596968571121
egfr TNRC6C_2 chr17_78049826_A_C,chr17_78067796_A_G 2.865420177578161e-05,0.003859622145256892 0.03771979541922566,0.03295200627528048
egfr PDGFRB_2 chr5_150135511_G_A,chr5_150129967_A_C 2.9565587793102473e-05,0.0011142332419287124 0.007951396082365123,0.010884978116376998
egfr ASPH_2 chr8_61578734_T_G,chr8_61638365_TA_T 3.0349566769525607e-06,0.014784455717628972 0.00027481062695969863,0.0033421074285719613
egfr MRPS25_2 chr3_15065217_A_C,chr3_15065038_A_C 3.231333497421803e-05,0.03913000849637771 0.0017607662142123156,0.008302391831822605
egfr CNIH4_2 chr1_224356827_A_G,chr1_224379302_G_A 3.345540294148141e-05,1.3298114540105321e-05 8.270232693194595e-06,0.004957072960670954
egfr STAT5B_2 chr17_42212246_T_A,chr17_42218217_T_TG 3.457612678303974e-05,0.009108698459398929 0.049805612849012526,0.041598649064757576
egfr NRF1_5 chr7_129690176_C_G,chr7_129709261_G_A,chr7_129710330_A_C,chr7_129711604_C_G,chr7_129717099_T_G 3.514964941916984e-05,0.0012574856804500286,0.0029569614211133396,0.0009106050710647207,0.0008333980926761285 0.0008588680251565,0.0020358531276104324,0.001863531871592876,0.00048643171799331433,0.006420212881434713
egfr C21orf58_2 chr21_46302477_A_G,chr21_46322980_A_AG 3.600317129022087e-06,0.000178616399448272 0.028316032350682373,0.0464048927112107
egfr EBF1_2 chr5_159099526_TA_T,chr5_159099526_T_TA 3.7020844162640586e-06,0.0061991425888554795 6.309766911659592e-06,0.009920112112628023
egfr PCNT_10 chr21_46438359_T_C,chr21_46440304_C_T,chr21_46442711_A_G,chr21_46444647_CTTT_C,chr21_46444900_C_T,chr21_46444910_G_C,chr21_46355631_G_C,chr21_46425893_A_C,chr21_46444675_T_G,chr21_46444677_T_G 3.8924131898677556e-05,0.00010294155569212726,0.00442543345514155,0.0007255960816556072,2.666879695038341e-05,2.666879695038341e-05,0.045239341586552524,0.0052653795831940926,0.011583428163992472,0.0012373038631552345 0.0007850146452497258,0.0011784720417395535,0.0010237263069919882,0.01824823490083048,0.00036147873774628185,0.00036147873774628185,0.0004512031541319047,0.01998375792506145,0.009046665740785187,0.01284951528238673
egfr RFT1_3 chr3_53104238_T_C,chr3_53120116_ATTAACTGCAC_A,chr3_53120127_T_G 4.1039519054300644e-05,0.010916191776172972,0.0009241739865608092 0.019143884189355254,0.0012736601162827682,0.0003755806923286365
egfr NGLY1_4 chr3_25733865_A_C,chr3_25736073_G_T,chr3_25764388_T_C,chr3_25732334_A_C 4.193690016854428e-05,1.0629890346566115e-06,0.00018111373229034528,0.000337635257557846 0.004048589804059987,0.0001003348545752524,0.008193558074218642,0.0008517116761761035
egfr SHPRH_2 chr6_145955343_T_G,chr6_145922945_GT_G 4.197525341776357e-06,0.02497921302813516 0.0019437040989644704,0.0032085441168495693
egfr PSAP_4 chr10_71817510_G_A,chr10_71820222_G_A,chr10_71823763_G_C,chr10_71825769_A_G 4.253559292570684e-05,1.4584188008395623e-05,0.0007450217858733059,7.15024619363838e-07 0.005989723973244358,0.004815444492138627,0.005093191498317171,0.001137729147313085
egfr EPG5_4 chr18_45907942_A_G,chr18_45860332_T_G,chr18_45967161_TG_T,chr18_45949582_G_A 4.41056482155363e-05,0.0325761410753079,5.0265150457437094e-08,0.0009686733993730644 0.00018099150138285703,5.454441871402812e-06,0.0031405068156816515,0.04928013785599337
egfr GRB7_2 chr17_39746744_A_C,chr17_39737973_T_C 4.445333626793725e-06,3.7814817628535414e-05 0.015646545098240962,0.0275943135807812
egfr TBC1D5_5 chr3_17233681_G_C,chr3_17238034_T_C,chr3_17258641_A_C,chr3_17428395_ATG_A,chr3_17238102_T_G 4.500069192335354e-07,5.287266410953234e-06,1.0934340959097885e-06,0.00038136339583758066,0.0015374412890621536 0.034850654424783314,0.048246561657752436,0.034850654424783314,9.180133184684152e-05,0.00428366923460265
egfr TTLL3_5 chr3_9825941_C_T,chr3_9826893_A_G,chr3_9829346_T_G,chr3_9832986_G_A,chr3_9835303_G_A 4.506908857236149e-08,9.62440960091469e-07,6.721794266994746e-08,3.966565971028462e-07,0.047234941799100816 0.004512931116648239,0.009182452462015591,0.0016666988915567758,0.005845443747610279,0.00549007437147901
egfr HAUS1_4 chr18_46118343_C_T,chr18_46123257_C_G,chr18_46122767_C_T,chr18_46118217_A_T 4.791384820535998e-09,9.485176947904584e-06,0.0008672645013724843,0.00028116915718734436 0.0017369506644946814,0.009435638863427392,0.00147832294217736,0.0031860563996751264
egfr FGD4_3 chr12_32640343_A_C,chr12_32640545_A_C,chr12_32582270_A_C 4.811506604588182e-07,0.027930843946287982,0.032681639982183666 0.0008756223675282764,0.0092856233481216,0.0015384650399147507
egfr PPDPF_2 chr20_63522320_T_G,chr20_63521771_A_C 5.287951236043515e-05,0.00689972604034751 0.043695255169413805,0.0005655672033991309
egfr ITGA2_2 chr5_53091493_C_T,chr5_53042183_A_C 5.4531358390517686e-05,0.03919199794742103 0.043791975990725485,0.0012604443318972665
egfr SLC44A3_5 chr1_94839884_A_G,chr1_94865029_A_C,chr1_94857210_T_G,chr1_94857357_C_G,chr1_94892383_G_T 5.602338522082008e-05,0.046411065532556,0.007150508797521116,0.017457449518246654,0.009632517735858792 0.038972716080465035,0.008550555716824466,0.016460335501241437,0.008036938687219244,0.029740691948763408
egfr USP4_5 chr3_49284594_T_A,chr3_49305742_G_A,chr3_49324936_C_T,chr3_49335612_A_G,chr3_49302213_T_A 5.782019897669962e-06,7.19205729889027e-06,1.709904241092868e-05,7.19205729889027e-06,5.51522445922424e-05 0.0014702427553570136,0.0018428609815186782,0.0024991863535684788,0.0018428609815186782,0.0003850173954240535
egfr CCDC12_4 chr3_46922012_T_C,chr3_46923707_C_G,chr3_46941247_T_C,chr3_46923591_T_G 5.914685515407129e-06,0.0018228664081414493,0.005309522612383735,0.004983454832882268 0.030142804350997518,0.03284103078371856,0.032410896819240385,0.04034475330385405
egfr TRIOBP_4 chr22_37723206_G_A,chr22_37734378_A_C,chr22_37765828_T_TG,chr22_37750578_C_T 5.971478816203375e-05,0.00027985715683595134,0.00029261375791339014,0.0030808446512811693 0.0051569691660451255,0.009407307485487609,0.022947122514129482,0.01009941891139795
egfr RAF1_2 chr3_12603508_C_T,chr3_12606048_T_TG 6.128646872671697e-07,0.0039523881023646075 0.0022616226810353037,8.653379217936721e-05
egfr FMNL1_5 chr17_45241411_G_C,chr17_45241412_C_G,chr17_45243751_T_G,chr17_45232440_T_G,chr17_45244864_G_C 6.171874985510183e-05,0.00015929956646855425,0.003538404752618725,0.004784366369409091,3.9901595948387376e-05 0.0020906187745857413,0.0076474907511281205,0.013884774496511404,0.006430399709476225,0.0024365462048673877
egfr RIPK4_2 chr21_41746606_T_G,chr21_41746170_T_C 6.423837221659731e-05,0.00010177497615683857 0.014247426375762309,0.03297049438127817
egfr AGPAT5_2 chr8_6724964_A_C,chr8_6757085_A_G 6.429038885162565e-07,0.00364477408851887 1.266950151869815e-06,0.001321765776974001
egfr USP48_3 chr1_21703696_T_C,chr1_21706077_T_G,chr1_21706735_G_A 6.450311033122228e-05,0.00028299304853152363,0.00012669514216415802 0.007845997236531468,0.01309954874203597,0.004449445235290158
egfr AP1M1_8 chr19_16206608_T_TG,chr19_16226612_T_C,chr19_16227721_G_A,chr19_16228258_G_A,chr19_16228904_C_T,chr19_16233717_C_G,chr19_16234288_T_C,chr19_16228794_T_G 6.528413032668653e-05,0.0064557081074910596,0.0024361725049911105,0.01837918810861549,0.025114292331133558,6.165054004198194e-05,0.002051667150159714,0.0008804072022582094 0.0008868669473225051,0.01491435109247843,0.00492438514382162,0.0030213758122107693,0.00454785100704076,6.396974124132157e-05,0.007302514064743812,0.008904488847639608
egfr DAZAP1_2 chr19_1432575_T_C,chr19_1432578_A_C 6.972933286419396e-09,0.00010616832462214354 0.008783799588482919,0.004625103934387489
egfr PACSIN3_2 chr11_47180569_G_A,chr11_47182508_A_C 7.134768403726839e-05,0.04020981298829434 0.021285924311691296,0.004000006496631303
egfr R3HCC1_4 chr8_23288582_A_G,chr8_23291465_G_T,chr8_23293365_T_G,chr8_23290051_G_A 7.2991599811489e-05,5.994421359171259e-05,0.012526023152146196,0.010041573920909331 0.02377854438814787,0.02377854438814787,9.39093538138813e-05,0.0033896878620269183
egfr SERPINB5_10 chr18_63486810_T_C,chr18_63487155_C_T,chr18_63489373_G_C,chr18_63493054_T_C,chr18_63493152_T_C,chr18_63503267_T_C,chr18_63503488_T_C,chr18_63503549_A_G,chr18_63503234_G_A,chr18_63504446_A_T 7.512909343200293e-07,1.61367941078967e-12,0.0017661748524282887,0.00358191163139034,1.15283914089761e-08,3.707481964958598e-05,3.699707858963291e-05,1.4974781606492456e-10,8.547425345240158e-05,0.001617719369677095 0.002310192116365421,0.0001900079796436893,0.0024982561142762962,0.004570527834506507,2.6119929305428517e-05,0.004811319593060203,0.00038813827261946135,0.0001894559075360232,0.008723212833525323,0.023248521588281557
egfr U2AF1_2 chr21_43107500_A_C,chr21_43107485_A_C 7.700487442691808e-05,0.0006563940756543221 3.5456060624197415e-05,0.0031649133811599275
egfr LLGL2_4 chr17_75569181_T_A,chr17_75558442_C_G,chr17_75573695_C_CCT,chr17_75575074_T_C 7.971949158890872e-06,3.785506483286314e-07,0.0064833437780985005,0.00395910816955325 0.018355040177942674,0.0004418073280201704,0.047670437975331784,0.004283559000108913
egfr PPFIA1_4 chr11_70365468_A_G,chr11_70375250_G_T,chr11_70337631_C_G,chr11_70331778_TCAAAAA_T 8.1777600824213e-05,2.2154751602898654e-10,0.007683460638024795,2.733195536548977e-07 0.01601938240153477,1.0104020665663723e-05,0.008528354106314544,0.002219921170959074
egfr STAG3_2 chr7_100197862_A_C,chr7_100182660_G_A 8.238419261021031e-05,0.008737491145039442 0.0017528283507844654,0.035261037489752685
egfr MYO5B_13 chr18_49837561_G_C,chr18_49875910_A_C,chr18_49937217_A_G,chr18_49954290_G_A,chr18_49847096_G_A,chr18_49849562_C_G,chr18_49849733_C_G,chr18_49880543_A_G,chr18_49880568_T_C,chr18_49929553_C_T,chr18_49929610_GA_G,chr18_49954528_T_C,chr18_49962255_A_G 8.380774951798238e-06,0.006905476699523033,2.4263131433880795e-10,1.7494996128043332e-06,5.5387782704635815e-05,3.8985071268389133e-07,7.81858565470932e-07,1.54439656564615e-07,2.371423829111085e-08,8.182928222668989e-13,1.4176493799349745e-07,2.0981325041460703e-11,3.691444258026264e-11 0.03791686668587351,0.011592306302894794,0.0007689742137758647,0.011825548378506088,0.024802045476053625,0.0005688441791387698,0.0007265409595720793,0.010189243521059816,0.00680321425888459,7.83580041933832e-07,0.004868666362089778,9.442141848800156e-05,0.00020102188598339758
egfr ZNF441_2 chr19_11767280_T_G,chr19_11778532_C_T 8.6437303626739e-08,3.655373741478951e-07 0.00119501780413069,0.007941778018462287
egfr FAM83H_3 chr8_143728128_T_G,chr8_143725596_G_C,chr8_143730455_T_G 9.215742981089235e-05,0.005987749784597274,0.0009621524329080232 0.005904909381665708,0.003207570177222234,0.011128551580065676
egfr KCNAB2_4 chr1_6085319_C_T,chr1_6095272_T_C,chr1_6085347_G_A,chr1_6094357_C_T 9.311243022811629e-05,0.0002214464879819671,0.007488052354416149,0.0004024482530986694 0.04271710391545418,0.04289813943359165,0.010697792728178102,0.030197643178852058
egfr MMP15_4 chr16_58038249_C_T,chr16_58042518_A_G,chr16_58045261_G_A,chr16_58037634_A_C 9.375120301838935e-05,1.005487978512005e-05,0.00013842386491697844,0.035127559966572304 0.006545735139458929,0.008269298799745639,0.016496855574598585,3.732680793190984e-05
egfr PKNOX1_3 chr21_43028653_G_C,chr21_43028665_G_A,chr21_43029807_G_A 9.45086875135022e-05,9.45086875135022e-05,0.0028391505331848486 0.02993846952653303,0.02993846952653303,0.04630035756513505
egfr CNOT6L_3 chr4_77720488_T_G,chr4_77720486_A_G,chr4_77726534_A_C 9.499774295611595e-07,0.0011515987198065605,1.5337206523072135e-05 0.00045440611666765506,0.003812687853894012,0.002323583718729919
egfr C1orf109_4 chr1_37683521_C_T,chr1_37689469_G_GGT,chr1_37689593_G_C,chr1_37684175_A_G 9.499906971175951e-07,3.357943291134777e-07,2.4786643546299445e-07,0.03129818295251388 0.0019238150218027989,0.005985910424044681,0.004025869106193675,0.0047335795687796075
egfr MAP7_2 chr6_136361034_G_A,chr6_136411526_G_A 9.631600220201912e-05,0.00020915694169969668 0.004233710215813943,0.03701019146859175
ERK MAPK signaling 약물에 대한 반응성 바이오 마커
Drug_Class Gene_exp 바이오마커 ( 발현조절변이세트 )
erk_mapk Gene_EXP:MARCH4 6_151015603_C_G
erk_mapk Gene_EXP:MARCH9 14_30910985_T_G
erk_mapk Gene_EXP:SEPT59 1_26457907_T_G
erk_mapk Gene_EXP:ABCA5 6_151015603_C_G
erk_mapk Gene_EXP:ABCA5 17_50677651_A_G,17_78529677_G_C
erk_mapk Gene_EXP:ABCB10 3_52786995_A_G
erk_mapk Gene_EXP:ABHD3 17_68269074_G_C
erk_mapk Gene_EXP:ABHD6 12_67294938_G_A
erk_mapk Gene_EXP:ACCS 11_44107740_C_A,7_135196179_C_T,9_61066407_C_T
erk_mapk Gene_EXP:ACN9 2_3465735_T_C
erk_mapk Gene_EXP:ACSF2 2_71393433_A_G,2_71424561_G_GT,2_71428456_T_A,2_71433365_T_TC
erk_mapk Gene_EXP:ACSS2 8_143538013_T_C
erk_mapk Gene_EXP:ACVR2B 14_92931686_G_C,14_92931733_G_A
erk_mapk Gene_EXP:ADAT2 5_141490949_A_G,17_41827392_A_C
erk_mapk Gene_EXP:ADCY7 16_15664876_A_C
erk_mapk Gene_EXP:ADCYAP1 12_96909915_A_C
erk_mapk Gene_EXP:ADNP2 9_41294004_C_A
erk_mapk Gene_EXP:AFAP1L2 2_39717176_T_G
erk_mapk Gene_EXP:AGPAT2 21_25714604_C_A
erk_mapk Gene_EXP:AGTRAP 2_178769706_G_T
erk_mapk Gene_EXP:AHI1 2_102664958_A_C
erk_mapk Gene_EXP:AIM1 11_124396830_G_A
erk_mapk Gene_EXP:ALDH3A1 21_41825867_C_T
erk_mapk Gene_EXP:ALG6 1_26457907_T_G
erk_mapk Gene_EXP:ALG9 14_76498312_C_T
erk_mapk Gene_EXP:AMD1 1_103003299_TA_T,5_7817145_GA_G,11_36280860_GA_G,15_22573938_CT_C
erk_mapk Gene_EXP:AMIGO2 19_2109072_C_T,19_2109158_T_C,19_2121317_C_T,19_2123329_A_G
erk_mapk Gene_EXP:ANKMY1 12_103753400_C_A
erk_mapk Gene_EXP:ANKRD22 17_81206909_A_C
erk_mapk Gene_EXP:ANKRD28 1_26457907_T_G
erk_mapk Gene_EXP:ANKRD46 5_124701240_T_G
erk_mapk Gene_EXP:ANO1 4_36121402_A_G
erk_mapk Gene_EXP:ANO4 9_41294004_C_A
erk_mapk Gene_EXP:ANO5 12_9427796_G_T
erk_mapk Gene_EXP:ANPEP 2_182063828_G_C,3_75338856_G_A
erk_mapk Gene_EXP:AP1S2 1_13225346_G_A,1_13345267_G_A,12_67294938_G_A
erk_mapk Gene_EXP:AP2S1 10_68572309_C_T
erk_mapk Gene_EXP:AP3M2 17_8888776_G_A
erk_mapk Gene_EXP:APBB1 7_117548606_ATG_A
erk_mapk Gene_EXP:APEH 15_70699666_A_G
erk_mapk Gene_EXP:APOC1 5_54519891_G_C
erk_mapk Gene_EXP:ARHGAP22 5_41008678_A_G,5_41009140_C_T,11_130470775_T_C
erk_mapk Gene_EXP:ARID1B 1_169953900_G_GT
erk_mapk Gene_EXP:ARL3 2_182063828_G_C
erk_mapk Gene_EXP:ARL6IP6 2_178707495_G_T,4_51995319_G_T,17_42806693_T_C,17_43189040_A_C
erk_mapk Gene_EXP:ARPC1A 9_39118208_G_T,9_41938349_G_T,9_61081995_G_T
erk_mapk Gene_EXP:ARRB1 16_46710765_T_A
erk_mapk Gene_EXP:ARSD 1_101786406_G_A
erk_mapk Gene_EXP:ARVCF 10_133626829_C_T,15_71256598_T_C
erk_mapk Gene_EXP:ASB8 19_35904227_A_C
erk_mapk Gene_EXP:ASGR2 6_138499187_A_G,10_38696926_C_T
erk_mapk Gene_EXP:ASH2L 9_33796659_C_T,9_33796705_C_G,9_33797971_T_A,9_33797993_G_A,9_33797994_C_T
erk_mapk Gene_EXP:ASTN1 7_152816454_C_T
erk_mapk Gene_EXP:ATG4D 19_12392240_G_A,19_12392282_A_G,19_12393278_A_G,19_12431541_A_G,19_12433052_A_G
erk_mapk Gene_EXP:ATG7 7_140753336_A_T,16_84170124_G_C
erk_mapk Gene_EXP:ATHL1 3_125578903_AT_A
erk_mapk Gene_EXP:ATP11A 2_85880864_T_C,3_132388903_G_A,9_128288585_G_C
erk_mapk Gene_EXP:ATP1A1 1_26457907_T_G
erk_mapk Gene_EXP:ATP2B3 1_26457907_T_G,17_7604041_A_C
erk_mapk Gene_EXP:ATP6V0B 1_9850602_T_G
erk_mapk Gene_EXP:ATP6V0B 17_78529723_C_G
erk_mapk Gene_EXP:ATP6V1G1 19_35904227_A_C
erk_mapk Gene_EXP:AVPI1 3_157413999_A_C
erk_mapk Gene_EXP:AXL 4_42616004_T_TA,4_42616121_A_G
erk_mapk Gene_EXP:AXL 14_73713060_A_C
erk_mapk Gene_EXP:AZU1 2_135023465_C_T,2_135133038_G_C,11_129905704_C_T
erk_mapk Gene_EXP:B3GNT8 3_74301846_T_C,17_7771466_C_T,17_7801487_C_G
erk_mapk Gene_EXP:BAALC 15_67236036_T_G
erk_mapk Gene_EXP:BANP 9_33270750_G_T
erk_mapk Gene_EXP:BARD1 9_133405414_T_G
erk_mapk Gene_EXP:BAZ2A 6_83940645_G_T
erk_mapk Gene_EXP:BHLHE22 1_26457907_T_G,22_21127217_C_G
erk_mapk Gene_EXP:BIRC7 17_78507511_T_C,17_78510525_G_A
erk_mapk Gene_EXP:BLCAP 4_48609132_A_G
erk_mapk Gene_EXP:BMP7 5_119530001_T_C
erk_mapk Gene_EXP:BPNT1 2_100964113_G_A,2_100977729_C_T
erk_mapk Gene_EXP:BST1 3_75338856_G_A
erk_mapk Gene_EXP:C10orf11 1_13344015_T_C
erk_mapk Gene_EXP:C10orf76 2_169557387_G_GA
erk_mapk Gene_EXP:C11orf74 2_216109160_C_A,2_237751320_TAA_T,13_49377006_T_C,16_21520152_G_A,16_21533198_T_C
erk_mapk Gene_EXP:C12orf49 21_29056427_GTAC_G
erk_mapk Gene_EXP:C12orf57 1_103082763_C_G
erk_mapk Gene_EXP:C14orf142 11_66055499_T_G
erk_mapk Gene_EXP:C16orf59 2_217847583_C_T,2_217847883_G_A
erk_mapk Gene_EXP:C17orf53 2_131597280_C_G,17_6998597_A_C,19_39885857_T_G
erk_mapk Gene_EXP:C17orf75 6_32183680_C_G
erk_mapk Gene_EXP:C1orf198 18_6985656_C_T
erk_mapk Gene_EXP:C1orf198 3_98581510_A_C,5_1079483_A_C,12_121263747_T_G,20_6215106_T_C
erk_mapk Gene_EXP:C1QTNF1 4_106337071_G_A
erk_mapk Gene_EXP:C2CD2L 1_158255229_C_G
erk_mapk Gene_EXP:C3AR1 7_147977856_A_T
erk_mapk Gene_EXP:C5orf34 7_22511655_A_C
erk_mapk Gene_EXP:C5orf54 19_10499560_A_G
erk_mapk Gene_EXP:C9orf123 9_41898374_T_G
erk_mapk Gene_EXP:C9orf50 6_30713139_C_T
erk_mapk Gene_EXP:C9orf69 2_9954891_G_GT,2_9996464_T_C
erk_mapk Gene_EXP:CA2 1_156378043_T_A
erk_mapk Gene_EXP:CABP7 1_46344858_A_G
erk_mapk Gene_EXP:CACNA2D2 15_67236036_T_G
erk_mapk Gene_EXP:CACNG4 6_5771301_A_C,7_140753336_A_T,16_11174168_A_G
erk_mapk Gene_EXP:CAMK2D 2_100964113_G_A,2_100977729_C_T,11_45181661_C_T
erk_mapk Gene_EXP:CAMK4 7_127596284_C_G
erk_mapk Gene_EXP:CAND2 X_101102205_C_G,X_101102212_T_C,X_101102428_CT_C
erk_mapk Gene_EXP:CASP8 17_75904383_G_C
erk_mapk Gene_EXP:CATSPER1 7_140753336_A_T
erk_mapk Gene_EXP:CAV1 10_133626829_C_T
erk_mapk Gene_EXP:CBLN2 1_170016655_A_G
erk_mapk Gene_EXP:CCDC136 9_131430074_C_T,19_11301321_TA_T
erk_mapk Gene_EXP:CCDC14 7_33357933_C_A,9_33529025_G_T
erk_mapk Gene_EXP:CCDC142 9_85773919_A_G
erk_mapk Gene_EXP:CCNF 19_9566733_T_G
erk_mapk Gene_EXP:CD151 11_828784_A_G,11_840477_A_G,11_840319_C_T,11_838110_C_T,11_837582_G_A
erk_mapk Gene_EXP:CD151 3_3845163_G_C,3_3845235_C_T
erk_mapk Gene_EXP:CD44 8_132137720_G_A
erk_mapk Gene_EXP:CD55 5_113384951_C_A
erk_mapk Gene_EXP:CD59 6_151015603_C_G
erk_mapk Gene_EXP:CD72 2_138288359_C_T
erk_mapk Gene_EXP:CD97 4_8036186_A_G,5_141193109_A_G,7_108514148_A_C,12_108517007_T_G,17_80137479_A_T
erk_mapk Gene_EXP:CDC25A 14_55169342_TAAA_T,19_9566733_T_G
erk_mapk Gene_EXP:CDCP1 22_24253656_C_G
erk_mapk Gene_EXP:CEBPD 6_150926303_A_G
erk_mapk Gene_EXP:CECR2 15_30596563_A_G
erk_mapk Gene_EXP:CENPM 19_10793898_A_C
erk_mapk Gene_EXP:CEP104 20_14326307_G_T
erk_mapk Gene_EXP:CEP41 13_36365551_C_T
erk_mapk Gene_EXP:CES2 8_17085328_C_T
erk_mapk Gene_EXP:CHGB 15_67236036_T_G
erk_mapk Gene_EXP:CHI3L2 3_7691039_AT_A,5_146267624_CT_C
erk_mapk Gene_EXP:CHID1 1_53250744_G_A,1_85071819_T_A,15_78922969_A_C,15_78939184_A_AG
erk_mapk Gene_EXP:CHN1 17_81206909_A_C
erk_mapk Gene_EXP:CHST8 11_5901136_G_A
erk_mapk Gene_EXP:CITED4 3_75338856_G_A
erk_mapk Gene_EXP:CLCNKA 10_31363289_T_C
erk_mapk Gene_EXP:CLEC11A 5_179863845_T_G,16_46710765_T_A
erk_mapk Gene_EXP:CLIP3 5_163482681_G_A
erk_mapk Gene_EXP:CLSPN 15_62651935_A_G,15_62657955_G_C
erk_mapk Gene_EXP:CMBL 11_117203393_G_A
erk_mapk Gene_EXP:CMIP 16_85071785_A_G
erk_mapk Gene_EXP:COL4A5 3_38092947_A_G
erk_mapk Gene_EXP:COMT 8_143538172_T_C,8_143538914_T_G
erk_mapk Gene_EXP:COPS8 11_69072603_C_T,11_124023539_A_G,11_124023038_C_T,16_57082546_T_C,16_57081660_C_T
erk_mapk Gene_EXP:CORO2A 12_67294938_G_A
erk_mapk Gene_EXP:CPNE8 X_24055660_C_A
erk_mapk Gene_EXP:CRNKL1 19_49365896_G_C
erk_mapk Gene_EXP:CRYBA2 17_19742625_A_C
erk_mapk Gene_EXP:CSF2 X_73845822_T_G
erk_mapk Gene_EXP:CSRNP1 2_95859892_G_T,8_7952044_T_C
erk_mapk Gene_EXP:CTGF 10_99533046_A_G
erk_mapk Gene_EXP:CTRB2 4_37433902_C_T,17_32933237_C_T,17_32934364_G_A
erk_mapk Gene_EXP:CTSL1 10_120866541_C_T,17_75130604_T_G,10_62069760_A_C,7_6857531_A_G,X_52907336_A_C
erk_mapk Gene_EXP:CTSL1 10_120866541_C_T,10_62069760_A_C,X_52907336_A_C,20_57610424_A_C,17_75130604_T_G
erk_mapk Gene_EXP:CTSL1 17_75130604_T_G,10_62069760_A_C,10_120866541_C_T,7_6857531_A_G,20_57610424_A_C
erk_mapk Gene_EXP:CXCL2 12_883063_C_T,12_895996_T_C
erk_mapk Gene_EXP:CXCL2 X_89922110_G_C
erk_mapk Gene_EXP:CXXC1 2_119254595_G_A,3_112199369_A_G
erk_mapk Gene_EXP:CYP4F22 22_21127217_C_G
erk_mapk Gene_EXP:DCTD 8_7429219_C_T
erk_mapk Gene_EXP:DDO 1_154732996_T_G
erk_mapk Gene_EXP:DDOST 7_36335190_G_A,4_133154998_T_C,1_147255938_G_A,7_74535081_T_C,6_10415074_C_G
erk_mapk Gene_EXP:DDR1 2_174801578_A_G,4_89936328_G_A
erk_mapk Gene_EXP:DDX60L 6_143772215_C_T
erk_mapk Gene_EXP:DGAT1 3_38905381_A_T,3_38910262_T_C,11_18484005_G_A
erk_mapk Gene_EXP:DKK3 11_24729296_G_A
erk_mapk Gene_EXP:DLC1 2_182063828_G_C,20_56366031_C_T
erk_mapk Gene_EXP:DLG2 1_26457907_T_G,22_18847351_G_C,22_21127217_C_G
erk_mapk Gene_EXP:DNMT3A 22_36566306_C_G
erk_mapk Gene_EXP:DOCK4 7_140753336_A_T,9_76227464_A_G
erk_mapk Gene_EXP:DOCK5 5_32053643_T_C
erk_mapk Gene_EXP:DOCK9 2_87800520_G_A,17_80065379_A_G
erk_mapk Gene_EXP:DOK6 18_12840880_T_C
erk_mapk Gene_EXP:DPP9 22_21127217_C_G
erk_mapk Gene_EXP:DPY19L3 15_65564315_G_A,17_78425362_G_A,17_78427070_C_T
erk_mapk Gene_EXP:DPYSL4 2_217847583_C_T,2_217847883_G_A,2_217848003_A_G,2_217842134_T_C,2_217847379_A_G
erk_mapk Gene_EXP:DPYSL5 1_26457907_T_G,22_21127217_C_G
erk_mapk Gene_EXP:DQX1 1_113907966_C_T
erk_mapk Gene_EXP:DTL 2_29239654_G_A
erk_mapk Gene_EXP:DTX3L 4_185267219_TA_T
erk_mapk Gene_EXP:DUSP5 6_32183680_C_G
erk_mapk Gene_EXP:DYSF 1_25390874_C_G,20_14326307_G_T
erk_mapk Gene_EXP:E2F4 17_3727947_A_G
erk_mapk Gene_EXP:EBP 14_91475998_T_A
erk_mapk Gene_EXP:EBPL 19_7640893_A_C
erk_mapk Gene_EXP:ECE1 7_100105324_G_A,7_101031028_C_T,17_49510638_C_T,20_32983679_C_T,12_50400904_T_G
erk_mapk Gene_EXP:ELK3 14_21082261_T_G
erk_mapk Gene_EXP:ELL2 6_32183680_C_G
erk_mapk Gene_EXP:ELOVL1 1_203683316_A_G,1_203698281_T_C
erk_mapk Gene_EXP:EMILIN2 5_179863845_T_G
erk_mapk Gene_EXP:ENC1 1_26457907_T_G,15_69422319_A_C
erk_mapk Gene_EXP:ENDOD1 1_201000288_T_G
erk_mapk Gene_EXP:ENG 3_186558604_C_T,22_29806785_G_C
erk_mapk Gene_EXP:EPB41 11_1758992_A_C
erk_mapk Gene_EXP:EPS8L1 2_206143951_C_CT,2_206144039_C_A,2_206160720_T_C,2_206176329_T_C
erk_mapk Gene_EXP:ERAP2 5_96986715_C_T,5_96917400_T_C,5_97003398_AC_A,5_97027703_C_T,5_96908881_A_C
erk_mapk Gene_EXP:ERAP2 5_96986715_C_T,5_96917400_T_C,5_97003398_AC_A,5_96908881_A_C,5_96895179_A_ATT
erk_mapk Gene_EXP:ERC2 22_36566306_C_G
erk_mapk Gene_EXP:EREG 17_50677651_A_G
erk_mapk Gene_EXP:ERH 6_47579334_T_TAA
erk_mapk Gene_EXP:ERMAP 10_111079134_C_A,4_25662622_G_A,2_160137837_C_T,2_182063828_G_C,2_160138253_A_G
erk_mapk Gene_EXP:ERO1L 6_47579334_T_TAA
erk_mapk Gene_EXP:ERRFI1 17_41820457_A_C
erk_mapk Gene_EXP:EVL 7_33264495_A_G
erk_mapk Gene_EXP:EVPL 15_84798628_G_A
erk_mapk Gene_EXP:EXOG 11_102186007_C_T,16_89792351_C_T
erk_mapk Gene_EXP:EXOSC8 2_127651579_A_C,6_30705792_T_G,6_73622013_G_C,6_73635330_C_T
erk_mapk Gene_EXP:EXT2 7_100959168_T_C,7_100959203_T_C
erk_mapk Gene_EXP:EZH2 1_26457907_T_G,22_18847351_G_C
erk_mapk Gene_EXP:FAM102A 20_10639738_A_G
erk_mapk Gene_EXP:FAM111B 19_49044175_A_G
erk_mapk Gene_EXP:FAM114A1 2_217847583_C_T
erk_mapk Gene_EXP:FAM124A 1_26457907_T_G,1_219210601_T_G
erk_mapk Gene_EXP:FAM63A 16_84779142_A_C
erk_mapk Gene_EXP:FAM83H 2_219489820_G_A,6_56701823_T_C
erk_mapk Gene_EXP:FBN2 3_52520584_A_C
erk_mapk Gene_EXP:FBXO10 7_72961358_G_A,7_73180651_C_T,7_75212025_G_A,7_75403732_C_T,17_63918839_T_A
erk_mapk Gene_EXP:FBXO21 17_47835431_A_G,5_176575304_A_C,10_37162775_G_C,2_223598038_G_T,2_130173628_A_C
erk_mapk Gene_EXP:FBXO33 8_143538013_T_C
erk_mapk Gene_EXP:FCER1G 10_47353252_A_G
erk_mapk Gene_EXP:FCGR2A 10_18500795_T_G
erk_mapk Gene_EXP:FCRLB 12_49974763_C_G,1_183239405_G_A,10_102365533_A_G,2_118982373_A_G,X_52907336_A_C
erk_mapk Gene_EXP:FEZ2 X_108735142_T_G
erk_mapk Gene_EXP:FGF9 13_32131648_A_G
erk_mapk Gene_EXP:FGFBP1 2_65069680_A_C,17_81206909_A_C
erk_mapk Gene_EXP:FHL3 11_65543121_A_C
erk_mapk Gene_EXP:FHL3 1_50200843_C_T
erk_mapk Gene_EXP:FHOD1 2_219250419_G_C,16_48167297_T_G,6_34872273_T_G,21_46245169_G_A,10_96386941_T_G
erk_mapk Gene_EXP:FKBP3 3_10301192_C_T,15_22715140_G_C
erk_mapk Gene_EXP:FRAT2 1_215813880_T_C,1_215838019_T_C
erk_mapk Gene_EXP:FYN X_120253978_C_CTGA
erk_mapk Gene_EXP:GAL 22_20751638_T_G
erk_mapk Gene_EXP:GAL3ST3 1_26457907_T_G
erk_mapk Gene_EXP:GALNT10 13_99295007_C_T,13_99314037_A_G
erk_mapk Gene_EXP:GALNT6 X_154465468_T_C
erk_mapk Gene_EXP:GATA2 2_182063828_G_C
erk_mapk Gene_EXP:GATA6 8_1678462_A_C,14_24330372_C_G
erk_mapk Gene_EXP:GBP1 3_55480738_A_T
erk_mapk Gene_EXP:GJB1 10_127125690_A_C,10_127127749_A_G
erk_mapk Gene_EXP:GLIPR1 16_55398_G_T
erk_mapk Gene_EXP:GLT25D1 5_135888024_G_T
erk_mapk Gene_EXP:GLTP 2_182994745_T_C
erk_mapk Gene_EXP:GLUL 16_46710765_T_A
erk_mapk Gene_EXP:GMPR 2_182063828_G_C
erk_mapk Gene_EXP:GNAO1 10_133626013_G_A
erk_mapk Gene_EXP:GNGT2 19_49189116_C_G
erk_mapk Gene_EXP:GPC1 3_184278425_C_T
erk_mapk Gene_EXP:GPC2 5_141432375_A_C
erk_mapk Gene_EXP:GPR18 2_1542589_G_T
erk_mapk Gene_EXP:GPR87 19_15807367_G_T
erk_mapk Gene_EXP:GPX1 12_49974763_C_G,2_85665590_T_G,19_38802052_C_G,6_43512063_C_G,11_117913802_T_G
erk_mapk Gene_EXP:GPX1 19_38802052_C_G,6_43512063_C_G,11_117913802_T_G,12_49974763_C_G,2_85665590_T_G
erk_mapk Gene_EXP:GRB10 7_51028450_A_G,12_56425138_C_T
erk_mapk Gene_EXP:GSN 11_129905704_C_T
erk_mapk Gene_EXP:GSN 2_170993697_G_A
erk_mapk Gene_EXP:GSTA4 17_80065379_A_G
erk_mapk Gene_EXP:GSTO1 1_109507591_A_C
erk_mapk Gene_EXP:HADHB 19_48942517_C_T,19_48944320_G_A,19_48944456_G_A
erk_mapk Gene_EXP:HBEGF 9_61862148_G_A
erk_mapk Gene_EXP:HBEGF 4_38137040_C_T
erk_mapk Gene_EXP:HDAC6 13_45503246_G_A
erk_mapk Gene_EXP:HEBP1 2_182063828_G_C
erk_mapk Gene_EXP:HERC4 Y_11344982_T_A
erk_mapk Gene_EXP:HFM1 17_36013794_G_A
erk_mapk Gene_EXP:HIBADH 1_485270_G_A
erk_mapk Gene_EXP:HIPK1 X_12976206_T_G
erk_mapk Gene_EXP:HIST1H2BG 14_77243033_A_C
erk_mapk Gene_EXP:HIST1H2BK 5_150396348_A_C,6_132814681_A_G
erk_mapk Gene_EXP:HIST2H2BE 6_132814681_A_G
erk_mapk Gene_EXP:HK1 16_74886293_G_A
erk_mapk Gene_EXP:HMGA1 20_49248835_G_A,20_49270147_G_A
erk_mapk Gene_EXP:HNMT 1_1756186_T_C
erk_mapk Gene_EXP:HOXA1 11_3410400_C_T
erk_mapk Gene_EXP:HR 2_87128802_G_A
erk_mapk Gene_EXP:HS3ST1 19_17422317_A_G
erk_mapk Gene_EXP:HS3ST4 1_26457907_T_G,12_52771095_C_G
erk_mapk Gene_EXP:HSD17B10 5_24511259_C_T
erk_mapk Gene_EXP:IBA57 1_21472921_G_A,10_50850592_T_TTG,17_76280234_G_A
erk_mapk Gene_EXP:ICAM1 8_12358868_A_G
erk_mapk Gene_EXP:ID4 4_9334816_T_C
erk_mapk Gene_EXP:IER5L 9_34623341_A_G
erk_mapk Gene_EXP:IFI35 12_15589379_GA_G
erk_mapk Gene_EXP:IFIT3 18_50806833_C_G
erk_mapk Gene_EXP:IFIT5 6_169632990_G_A,6_169665646_G_A
erk_mapk Gene_EXP:IGF2BP2 1_39522547_C_T
erk_mapk Gene_EXP:IKBIP 5_141636680_A_C
erk_mapk Gene_EXP:IL13RA1 1_26457907_T_G
erk_mapk Gene_EXP:IL15RA 22_36566306_C_G
erk_mapk Gene_EXP:IL15RA 7_126902472_G_A
erk_mapk Gene_EXP:IL17RB 19_44506064_G_T
erk_mapk Gene_EXP:IL31RA 4_20727343_G_C
erk_mapk Gene_EXP:INSR 10_43845624_CATTGATT_C
erk_mapk Gene_EXP:IRF1 3_177032946_G_C
erk_mapk Gene_EXP:IRX2 1_2562891_G_A,7_140753336_A_T,12_14460981_T_A
erk_mapk Gene_EXP:ISG20 5_179863845_T_G
erk_mapk Gene_EXP:ITGA3 2_217847583_C_T,2_217847883_G_A,2_217848003_A_G
erk_mapk Gene_EXP:ITGA6 7_74046648_T_G
erk_mapk Gene_EXP:ITGAV 3_180647255_T_TA
erk_mapk Gene_EXP:ITGB1 1_13345267_G_A
erk_mapk Gene_EXP:ITGB4 9_88647579_G_T,20_32983679_C_T
erk_mapk Gene_EXP:ITGBL1 1_26457907_T_G
erk_mapk Gene_EXP:ITM2A 1_26457907_T_G
erk_mapk Gene_EXP:ITPRIPL1 22_36800827_G_A,22_36800927_C_A
erk_mapk Gene_EXP:ITPRIPL1 2_24209270_T_C
erk_mapk Gene_EXP:JAKMIP2 21_10605542_G_A
erk_mapk Gene_EXP:JAKMIP2 22_21127217_C_G
erk_mapk Gene_EXP:KCNJ11 2_217847583_C_T,2_217847883_G_A,2_217848003_A_G,2_217848559_G_A
erk_mapk Gene_EXP:KCNK6 17_81206909_A_C
erk_mapk Gene_EXP:KCNMB2 18_50806833_C_G
erk_mapk Gene_EXP:KCTD7 11_63646490_AAAAT_A,11_63719914_T_C,12_128669441_G_A
erk_mapk Gene_EXP:KDM1B 15_65447029_G_A
erk_mapk Gene_EXP:KDM3A 9_61211264_T_G
erk_mapk Gene_EXP:KHK 2_217847583_C_T,2_217848003_A_G
erk_mapk Gene_EXP:KHSRP 7_151377210_A_G
erk_mapk Gene_EXP:KIAA1239 7_83961536_T_C
erk_mapk Gene_EXP:KIAA1377 19_2896950_T_C
erk_mapk Gene_EXP:KIAA1456 1_26457907_T_G,3_52520584_A_C,15_25177023_G_C,22_21127217_C_G,22_22643666_C_G
erk_mapk Gene_EXP:KIDINS220 5_50403159_C_A
erk_mapk Gene_EXP:KIFC3 1_207545558_G_A,1_207564114_G_A
erk_mapk Gene_EXP:KLHDC3 15_82759440_C_T
erk_mapk Gene_EXP:KLK6 4_48170201_C_T,4_48170249_G_A
erk_mapk Gene_EXP:KRT10 2_97196659_G_A,7_92671549_C_T
erk_mapk Gene_EXP:LAPTM4B 20_56366031_C_T
erk_mapk Gene_EXP:LCK 1_220110770_GT_G,7_73465568_GA_G,2_161993434_TA_T,6_46668819_GT_G,5_64507681_TA_T
erk_mapk Gene_EXP:LCK 7_73465568_GA_G,1_220110770_GT_G,2_161993434_TA_T,6_46668819_GT_G,5_64507681_TA_T
erk_mapk Gene_EXP:LCN9 22_42070262_A_C
erk_mapk Gene_EXP:LEF1 6_136108863_GA_G,11_63382198_CA_C,9_100450496_GT_G,1_151694350_CT_C,13_37746457_TAA_TA
erk_mapk Gene_EXP:LGALS1 4_8036186_A_G
erk_mapk Gene_EXP:LGALS12 7_128804766_A_G,7_128805316_G_A,14_63384641_T_C
erk_mapk Gene_EXP:LGALS8 13_98000593_A_G
erk_mapk Gene_EXP:LIG1 2_217847583_C_T,2_217848003_A_G
erk_mapk Gene_EXP:LIMS1 8_138630731_T_C
erk_mapk Gene_EXP:LIN7A 13_45541596_C_A
erk_mapk Gene_EXP:LINGO1 1_26457907_T_G,11_66624536_A_C,22_21127217_C_G,22_22643666_C_G
erk_mapk Gene_EXP:LMO3 1_26457907_T_G
erk_mapk Gene_EXP:LPP 1_26457907_T_G
erk_mapk Gene_EXP:LRCH2 19_1825787_T_TA
erk_mapk Gene_EXP:LRFN5 10_3165440_A_G
erk_mapk Gene_EXP:LRP10 1_26457907_T_G,12_52771095_C_G,22_22643666_C_G
erk_mapk Gene_EXP:LRP3 9_77415913_G_T,1_165249397_C_G,3_75338856_G_A,6_159214911_T_G,7_81974555_G_GAA
erk_mapk Gene_EXP:LRP3 1_165249397_C_G,9_77415913_G_T,3_75338856_G_A,6_159214911_T_G,7_81974555_G_GAA
erk_mapk Gene_EXP:LRPAP1 7_36335190_G_A,22_39052745_T_C
erk_mapk Gene_EXP:LRRC4C 12_52771095_C_G
erk_mapk Gene_EXP:LRRN1 4_654142_G_A,10_26492426_T_C,14_67347493_A_C
erk_mapk Gene_EXP:MAD2L2 7_117548606_ATG_A
erk_mapk Gene_EXP:MAN1B1 19_57455681_G_T,19_57455765_G_A,19_57473550_A_G,19_57490144_T_A,19_57507480_A_G
erk_mapk Gene_EXP:MAP2K6 6_151015603_C_G
erk_mapk Gene_EXP:MAP4 7_33099535_G_A
erk_mapk Gene_EXP:MBLAC1 3_179365291_C_T
erk_mapk Gene_EXP:MCFD2 1_161518073_C_T,1_161518227_T_C
erk_mapk Gene_EXP:MDFIC 14_64588098_C_T
erk_mapk Gene_EXP:MEF2A 22_24321550_G_A
erk_mapk Gene_EXP:MEIG1 17_2334690_C_A
erk_mapk Gene_EXP:MET 10_133626012_T_A,10_133626013_G_A
erk_mapk Gene_EXP:MFSD10 4_9230731_G_C
erk_mapk Gene_EXP:MFSD12 12_67294938_G_A
erk_mapk Gene_EXP:MFSD5 10_93374837_C_T,10_96386941_T_G,12_9153310_A_C
erk_mapk Gene_EXP:MGLL 1_26457907_T_G,22_21127217_C_G,22_22643666_C_G
erk_mapk Gene_EXP:MICAL2 6_151015603_C_G
erk_mapk Gene_EXP:MICAL2 12_88053784_G_C,12_88054289_A_AT,12_88077197_T_G
erk_mapk Gene_EXP:MICALL1 22_36566306_C_G
erk_mapk Gene_EXP:MICALL2 2_182063828_G_C
erk_mapk Gene_EXP:MLC1 1_26457907_T_G,7_72941936_T_C
erk_mapk Gene_EXP:MLKL 17_80137479_A_T
erk_mapk Gene_EXP:MMP14 1_16580833_G_T
erk_mapk Gene_EXP:MMP14 15_99729430_G_C
erk_mapk Gene_EXP:MMRN2 19_15807367_G_T
erk_mapk Gene_EXP:MPP1 7_114663562_CT_C,9_33796659_C_T,9_33798019_A_G
erk_mapk Gene_EXP:MRPS26 8_119240272_G_C
erk_mapk Gene_EXP:MRPS34 3_180647255_T_TA
erk_mapk Gene_EXP:MSI2 22_43972861_C_T
erk_mapk Gene_EXP:MSRB3 3_52520584_A_C,22_37816755_A_G
erk_mapk Gene_EXP:MYH9 1_26457907_T_G,22_21127217_C_G
erk_mapk Gene_EXP:MYH9 22_36566306_C_G
erk_mapk Gene_EXP:MYL6B 11_284257_G_A
erk_mapk Gene_EXP:MYLK 1_203181080_G_A
erk_mapk Gene_EXP:MYO1E 15_25170856_G_A,X_153670877_G_T
erk_mapk Gene_EXP:MYO1F 10_18500795_T_G
erk_mapk Gene_EXP:MYOF 1_26457907_T_G,5_141432375_A_C
erk_mapk Gene_EXP:MYT1 2_217847583_C_T,2_217847883_G_A,2_217848003_A_G
erk_mapk Gene_EXP:N6AMT1 17_6755950_T_G
erk_mapk Gene_EXP:NAP1L2 2_227244910_T_TG,5_7817145_GA_G
erk_mapk Gene_EXP:NBN 5_38425215_C_G
erk_mapk Gene_EXP:NCAPD3 17_8881770_A_C,17_8881775_C_T
erk_mapk Gene_EXP:NDUFA13 17_78803816_A_G
erk_mapk Gene_EXP:NEXN 11_124397016_A_G
erk_mapk Gene_EXP:NFE2 2_182063828_G_C
erk_mapk Gene_EXP:NFE2L3 5_113434330_T_G,22_32394994_C_G,X_119791251_A_C
erk_mapk Gene_EXP:NFKBIZ 6_47579334_T_TAA
erk_mapk Gene_EXP:NIP7 9_33529025_G_T,9_122724363_T_G
erk_mapk Gene_EXP:NKAIN2 1_169804019_T_C
erk_mapk Gene_EXP:NMNAT3 6_99568464_G_C
erk_mapk Gene_EXP:NOL4 1_26270944_G_A
erk_mapk Gene_EXP:NOTCH2 20_63940084_T_G
erk_mapk Gene_EXP:NPW 1_26457907_T_G,3_52520584_A_C,15_69422319_A_C
erk_mapk Gene_EXP:NRP1 3_180647255_T_TA,15_68718780_C_T
erk_mapk Gene_EXP:NSMAF 1_117088769_T_C
erk_mapk Gene_EXP:NT5E 1_169804019_T_C
erk_mapk Gene_EXP:NUCB2 8_26370124_A_G
erk_mapk Gene_EXP:NUDC 18_24064127_G_T
erk_mapk Gene_EXP:NUP188 17_73203001_T_G
erk_mapk Gene_EXP:NXNL2 12_54002598_T_G
erk_mapk Gene_EXP:OAF 9_83976942_T_C,9_83978162_A_T
erk_mapk Gene_EXP:OGDHL 9_114169165_T_C
erk_mapk Gene_EXP:OPHN1 12_54002598_T_G
erk_mapk Gene_EXP:ORMDL3 2_178769706_G_T,19_49044101_A_G
erk_mapk Gene_EXP:OSBPL11 10_122336520_T_C,10_122336546_A_C,17_4896602_C_T
erk_mapk Gene_EXP:OSBPL5 2_232380431_T_C
erk_mapk Gene_EXP:OSCAR 20_23444001_C_T
erk_mapk Gene_EXP:P2RY6 2_71418498_G_GT,2_71424561_G_GT
erk_mapk Gene_EXP:P2RY6 2_71398637_G_A,2_71399439_CTA_C,2_71418498_G_GT,2_71424561_G_GT
erk_mapk Gene_EXP:P4HB 2_71427045_G_A
erk_mapk Gene_EXP:PANK3 8_8786072_C_G,8_8797513_C_T
erk_mapk Gene_EXP:PAPD4 19_54274840_G_A
erk_mapk Gene_EXP:PAPSS2 17_7388330_T_G
erk_mapk Gene_EXP:PARP12 22_36566306_C_G
erk_mapk Gene_EXP:PARP9 4_185267219_TA_T
erk_mapk Gene_EXP:PAWR 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T
erk_mapk Gene_EXP:PAX3 12_67294938_G_A,11_4573507_G_GT,11_5489193_ATCT_A,3_14181724_C_T,22_31267999_C_T
erk_mapk Gene_EXP:PCBP4 1_247588807_A_G
erk_mapk Gene_EXP:PCDH7 11_64284449_A_C
erk_mapk Gene_EXP:PCLO 1_56949637_G_A,1_56956838_C_T
erk_mapk Gene_EXP:PCSK1N 15_74801109_A_C
erk_mapk Gene_EXP:PDIA5 2_43676215_T_C,11_18534402_T_C
erk_mapk Gene_EXP:PDLIM1 11_124186080_G_A,11_124224942_C_A
erk_mapk Gene_EXP:PDLIM4 3_111845992_A_G
erk_mapk Gene_EXP:PDLIM7 16_84872374_G_C
erk_mapk Gene_EXP:PDP1 4_87811722_A_G,15_25189495_C_T,15_25199636_G_A,15_25185507_G_A,15_25194819_G_A
erk_mapk Gene_EXP:PEG10 10_46549870_A_G
erk_mapk Gene_EXP:PELI2 9_114169457_C_T,17_68420216_C_T
erk_mapk Gene_EXP:PHACTR2 5_146013801_C_T
erk_mapk Gene_EXP:PHC2 20_32983679_C_T
erk_mapk Gene_EXP:PHF21B 11_124382822_G_A,11_124382854_G_A
erk_mapk Gene_EXP:PIAS2 18_49837560_A_G,18_49837561_G_C
erk_mapk Gene_EXP:PIDD 8_73322989_C_A
erk_mapk Gene_EXP:PIEZO1 8_143649856_G_A,12_122781141_A_G,21_25592836_G_A,21_25592893_T_C,21_25597391_T_C
erk_mapk Gene_EXP:PIGB 15_59207967_A_G,15_59207979_A_G,15_59207981_C_G,15_59207987_T_C
erk_mapk Gene_EXP:PIK3CB 2_42288248_A_G,5_16474706_T_G
erk_mapk Gene_EXP:PITX1 10_43373649_C_A
erk_mapk Gene_EXP:PLA2G7 10_21612326_CT_C
erk_mapk Gene_EXP:PLAGL1 7_93426338_G_A,11_118551711_A_G,14_104792556_A_G,16_28902389_G_T
erk_mapk Gene_EXP:PLEKHN1 8_378251_A_G
erk_mapk Gene_EXP:PLK2 1_26457907_T_G
erk_mapk Gene_EXP:PLSCR5 9_111444272_T_G
erk_mapk Gene_EXP:PLXNA3 1_113114916_G_A
erk_mapk Gene_EXP:PNPLA8 17_21300996_G_T,17_21301003_T_C,17_21301006_A_G
erk_mapk Gene_EXP:POC1A 22_46638059_A_C
erk_mapk Gene_EXP:POLE 2_217847583_C_T
erk_mapk Gene_EXP:POLE4 2_218618671_A_C,19_9611315_T_C,1_220001162_G_T,X_119085370_C_A,16_72107293_C_G
erk_mapk Gene_EXP:PPM1K 5_179863845_T_G
erk_mapk Gene_EXP:PPP1R13L 7_33099535_G_A
erk_mapk Gene_EXP:PPP1R1A 1_26457907_T_G,5_141432375_A_C
erk_mapk Gene_EXP:PPP1R1B 1_109626825_A_C,6_53899709_T_G,7_99012221_A_C
erk_mapk Gene_EXP:PPP2R3C 5_97179013_C_G
erk_mapk Gene_EXP:PPP6R1 17_43829748_T_G
erk_mapk Gene_EXP:PPT1 11_85898919_C_T
erk_mapk Gene_EXP:PRAM1 2_178769706_G_T,2_232380380_A_G,7_128805316_G_A
erk_mapk Gene_EXP:PRDM15 1_26457907_T_G
erk_mapk Gene_EXP:PRDM15 5_181333681_C_T
erk_mapk Gene_EXP:PREP 22_32225632_C_T
erk_mapk Gene_EXP:PREX1 9_34371054_A_C
erk_mapk Gene_EXP:PRSS35 1_26457907_T_G
erk_mapk Gene_EXP:PRSS57 9_33796659_C_T
erk_mapk Gene_EXP:PSTPIP2 2_182063828_G_C,6_143760631_C_A,6_143772215_C_T
erk_mapk Gene_EXP:PTBP2 15_59682341_T_A
erk_mapk Gene_EXP:PTCHD4 11_4102115_C_G,11_4112087_C_A,11_4132537_A_G,11_4138236_G_A
erk_mapk Gene_EXP:PTGFRN 5_126804830_T_C,5_126836282_C_T,11_1250937_C_T
erk_mapk Gene_EXP:PTGR1 19_45698914_C_T
erk_mapk Gene_EXP:PTGS2 11_86556636_G_A,11_86559642_C_T
erk_mapk Gene_EXP:PTP4A3 X_92201459_T_G
erk_mapk Gene_EXP:PTPN12 14_99909370_C_T
erk_mapk Gene_EXP:PTPRO 1_169725777_A_G,1_169727805_G_A
erk_mapk Gene_EXP:PTPRR 22_46283967_C_T
erk_mapk Gene_EXP:PTX3 7_140753336_A_T,14_21082261_T_G
erk_mapk Gene_EXP:PURG 5_141432375_A_C
erk_mapk Gene_EXP:PVRL2 17_999610_T_C
erk_mapk Gene_EXP:QDPR X_153569278_T_C
erk_mapk Gene_EXP:RAB21 2_29239654_G_A
erk_mapk Gene_EXP:RAB2B 15_20251568_G_A
erk_mapk Gene_EXP:RAB31 3_75338856_G_A
erk_mapk Gene_EXP:RAB31 6_32027037_A_C,X_81277112_A_C
erk_mapk Gene_EXP:RAB39B 8_2102806_A_G
erk_mapk Gene_EXP:RABGAP1 3_10260372_A_G,17_20204460_T_C,17_20205876_C_T,17_20357788_A_G
erk_mapk Gene_EXP:RAD1 7_22511655_A_C
erk_mapk Gene_EXP:RAI14 5_94871301_T_G,14_21082261_T_G
erk_mapk Gene_EXP:RALGPS1 7_100098747_C_G
erk_mapk Gene_EXP:RAP2A 10_31363289_T_C
erk_mapk Gene_EXP:RASA3 1_159858338_A_G,9_89037499_A_T,9_138176986_A_G,13_49892902_CT_C,13_49892908_G_C
erk_mapk Gene_EXP:RBKS 7_140126550_T_A
erk_mapk Gene_EXP:RBM11 1_26457907_T_G,5_141432375_A_C,19_624780_A_G,8_109483107_T_G,12_52771095_C_G
erk_mapk Gene_EXP:RBM11 1_26457907_T_G,19_624780_A_G,5_141432375_A_C,8_109483107_T_G,22_18847351_G_C
erk_mapk Gene_EXP:RBM18 10_131944182_G_C
erk_mapk Gene_EXP:RCAN2 3_57289142_A_G
erk_mapk Gene_EXP:REEP5 14_77243033_A_C
erk_mapk Gene_EXP:REP15 8_69638689_A_C
erk_mapk Gene_EXP:RFX3 7_67238251_A_AT
erk_mapk Gene_EXP:RGS2 18_12978734_C_G
erk_mapk Gene_EXP:RIC8B 3_39412024_A_G
erk_mapk Gene_EXP:RIN3 6_38782929_A_G
erk_mapk Gene_EXP:RNF145 15_65447029_G_A
erk_mapk Gene_EXP:RNF207 9_134036501_T_G,16_68564104_A_G
erk_mapk Gene_EXP:RNF24 5_179863845_T_G
erk_mapk Gene_EXP:RNFT2 22_36566306_C_G
erk_mapk Gene_EXP:ROPN1L 2_200876848_T_C,16_33978977_C_T
erk_mapk Gene_EXP:ROR2 6_6305225_G_C,13_44436731_C_T
erk_mapk Gene_EXP:RPL39L 17_61465729_T_C
erk_mapk Gene_EXP:RPS6KA4 17_11923796_C_A
erk_mapk Gene_EXP:RRM1 2_217847583_C_T
erk_mapk Gene_EXP:RSBN1 2_127286836_G_C
erk_mapk Gene_EXP:RUFY1 17_73212821_T_C
erk_mapk Gene_EXP:RUNDC3B 4_68236279_G_GA
erk_mapk Gene_EXP:RXRA 15_30087620_G_A,15_32400109_G_A
erk_mapk Gene_EXP:S100A11 11_124145287_C_T
erk_mapk Gene_EXP:S100A8 12_11091570_G_A
erk_mapk Gene_EXP:S1PR2 1_204261453_G_A,3_54386725_A_G
erk_mapk Gene_EXP:SBNO2 2_26503884_G_A
erk_mapk Gene_EXP:SCAPER 2_68528704_T_C
erk_mapk Gene_EXP:SCO2 X_14581235_C_G,X_14581237_T_G,X_55487442_C_G
erk_mapk Gene_EXP:SDC1 1_26457907_T_G,3_52520584_A_C
erk_mapk Gene_EXP:SDPR 15_23364667_T_G
erk_mapk Gene_EXP:SEC24D 1_13345267_G_A
erk_mapk Gene_EXP:SEMA4B 7_92469651_G_A
erk_mapk Gene_EXP:SEMA6A 7_44801523_C_T
erk_mapk Gene_EXP:SEMA7A 22_24253656_C_G
erk_mapk Gene_EXP:SERINC3 2_25980839_T_G
erk_mapk Gene_EXP:SERPINB8 6_69361281_G_A
erk_mapk Gene_EXP:SERPINE1 1_17240836_G_T,X_156025548_C_T
erk_mapk Gene_EXP:SFXN3 15_42878595_A_G,15_42952501_A_G
erk_mapk Gene_EXP:SGCB 17_40035671_A_G
erk_mapk Gene_EXP:SGCE 5_149320388_T_C,10_46549870_A_G,10_46550021_C_T,10_46550133_C_A,10_46550822_T_C
erk_mapk Gene_EXP:SGMS1 1_26457907_T_G,22_22643666_C_G
erk_mapk Gene_EXP:SGPP1 1_153645034_CT_C
erk_mapk Gene_EXP:SGTB 9_74785802_T_C
erk_mapk Gene_EXP:SH2B3 1_155661475_T_C,14_64052317_A_G,14_64070939_G_A,19_43359267_G_A
erk_mapk Gene_EXP:SH2B3 14_21082261_T_G
erk_mapk Gene_EXP:SH3BGR 19_44985176_A_G
erk_mapk Gene_EXP:SIAH3 1_26457907_T_G,15_69422319_A_C
erk_mapk Gene_EXP:SIK1 4_61979670_G_C,12_49752390_C_CT,17_32049442_G_A
erk_mapk Gene_EXP:SLAIN1 1_26457907_T_G,22_21127217_C_G
erk_mapk Gene_EXP:SLC19A3 1_26457907_T_G
erk_mapk Gene_EXP:SLC24A6 19_53237569_T_C,19_53251483_T_C
erk_mapk Gene_EXP:SLC25A14 3_146194390_T_G,3_151199213_T_G,14_45020416_A_G
erk_mapk Gene_EXP:SLC26A1 1_237511850_A_AG
erk_mapk Gene_EXP:SLC30A4 3_39068885_T_TA,3_39078124_T_C,22_39032391_C_G
erk_mapk Gene_EXP:SLC34A1 2_230498537_TA_T
erk_mapk Gene_EXP:SLC35D2 7_100996137_C_A,7_100996138_G_A,7_101004057_C_A,7_101004058_G_A
erk_mapk Gene_EXP:SLC35F1 1_26457907_T_G
erk_mapk Gene_EXP:SLC37A2 6_70302872_T_C
erk_mapk Gene_EXP:SLC38A1 7_114653804_G_T
erk_mapk Gene_EXP:SLC39A13 7_140753336_A_T,17_35259011_T_G,14_21082261_T_G,3_48790461_T_G,11_85724752_T_C
erk_mapk Gene_EXP:SLC39A3 1_28690201_G_T,16_400140_C_CAG
erk_mapk Gene_EXP:SLC39A9 19_50977584_C_G,X_52862616_A_G,X_55624568_T_C
erk_mapk Gene_EXP:SLCO5A1 1_26457907_T_G
erk_mapk Gene_EXP:SLFN12 1_241723452_T_C,1_241723462_A_G
erk_mapk Gene_EXP:SLITRK3 1_26457907_T_G,12_52771095_C_G
erk_mapk Gene_EXP:SLITRK3 8_378251_A_G
erk_mapk Gene_EXP:SMAP2 3_75665457_C_T
erk_mapk Gene_EXP:SMC2 15_62657955_G_C
erk_mapk Gene_EXP:SNAP25 2_71424561_G_GT
erk_mapk Gene_EXP:SNAPC3 15_71256598_T_C
erk_mapk Gene_EXP:SNRPG 7_12377736_T_C
erk_mapk Gene_EXP:SNX29 3_54386725_A_G
erk_mapk Gene_EXP:SP140L 19_9857463_G_A
erk_mapk Gene_EXP:SPOPL 5_35876172_A_G
erk_mapk Gene_EXP:SRSF7 5_181333681_C_T
erk_mapk Gene_EXP:SSFA2 17_14207114_G_T
erk_mapk Gene_EXP:SSH3 3_7680310_G_A
erk_mapk Gene_EXP:ST18 10_133626012_T_A,10_133626013_G_A
erk_mapk Gene_EXP:STAG2 3_10819431_A_G
erk_mapk Gene_EXP:STEAP1 17_50677651_A_G
erk_mapk Gene_EXP:STEAP2 4_25676577_A_G
erk_mapk Gene_EXP:STYXL1 19_2097371_G_C
erk_mapk Gene_EXP:SUCLG2 3_160423378_C_T
erk_mapk Gene_EXP:SYNGR1 1_149055998_GA_G,19_52434956_A_G
erk_mapk Gene_EXP:TAF3 1_75148689_A_T
erk_mapk Gene_EXP:TAGLN2 19_10562664_C_T
erk_mapk Gene_EXP:TBXAS1 1_13104901_G_A,1_13116020_T_C
erk_mapk Gene_EXP:TEAD3 18_166710_TTAAAA_T,18_166819_T_C,18_264012_G_A
erk_mapk Gene_EXP:TERF2IP 8_41690230_G_A
erk_mapk Gene_EXP:TES 4_190026474_T_A,4_190026475_G_A,10_133626013_G_A
erk_mapk Gene_EXP:TEX30 10_31363289_T_C
erk_mapk Gene_EXP:TFPI 6_47579334_T_TAA
erk_mapk Gene_EXP:TGFB1I1 1_149813302_A_C
erk_mapk Gene_EXP:TGM2 19_2118693_C_T
erk_mapk Gene_EXP:THAP9 11_62392198_A_C,5_76209739_T_G,20_23990353_G_A,10_102365533_A_G,10_37162765_A_C
erk_mapk Gene_EXP:THBS1 15_65447029_G_A
erk_mapk Gene_EXP:THEMIS 6_75240393_TA_T,20_2493490_GA_G
erk_mapk Gene_EXP:TICAM1 5_50403159_C_A
erk_mapk Gene_EXP:TIGD3 5_135888024_G_T
erk_mapk Gene_EXP:TIMELESS 2_218827668_A_C,20_48700966_A_C
erk_mapk Gene_EXP:TIMP1 19_9985806_C_T
erk_mapk Gene_EXP:TLN1 6_24595848_C_G
erk_mapk Gene_EXP:TM4SF19 4_119292875_T_G
erk_mapk Gene_EXP:TMEM150A 10_88602550_CT_C
erk_mapk Gene_EXP:TMEM151B 9_67920363_C_T
erk_mapk Gene_EXP:TMEM173 1_201199371_G_A,1_201200426_T_G
erk_mapk Gene_EXP:TMEM43 2_230875561_A_G
erk_mapk Gene_EXP:TMEM64 7_126902472_G_A
erk_mapk Gene_EXP:TMEM71 8_12358868_A_G,12_20861205_C_G
erk_mapk Gene_EXP:TMEM74 15_67236036_T_G
erk_mapk Gene_EXP:TMEM92 8_1565648_A_G,9_61104415_C_T
erk_mapk Gene_EXP:TMEM9B 1_26457907_T_G,11_120298301_A_C
erk_mapk Gene_EXP:TMPRSS13 12_110537085_T_C
erk_mapk Gene_EXP:TMPRSS4 11_18484085_G_A
erk_mapk Gene_EXP:TNFAIP8 17_16624481_C_A
erk_mapk Gene_EXP:TNFRSF1A 6_71969190_A_G,15_34381982_T_C,15_34528203_T_C,16_46710765_T_A
erk_mapk Gene_EXP:TNFRSF1A 11_125747422_A_G
erk_mapk Gene_EXP:TNIP1 5_154823483_T_G,15_32616231_T_G
erk_mapk Gene_EXP:TNIP2 7_33099535_G_A
erk_mapk Gene_EXP:TNS3 7_47967711_A_T
erk_mapk Gene_EXP:TOM1L1 5_32053643_T_C,11_117136643_A_G,11_117207940_T_C
erk_mapk Gene_EXP:TOX2 1_116133184_T_G
erk_mapk Gene_EXP:TP53I11 7_45648634_G_A
erk_mapk Gene_EXP:TP53I3 12_124966731_T_C
erk_mapk Gene_EXP:TPCN1 1_240245489_G_A
erk_mapk Gene_EXP:TPD52L2 9_134036501_T_G
erk_mapk Gene_EXP:TRIM21 18_50806833_C_G
erk_mapk Gene_EXP:TRIM26 11_129905704_C_T
erk_mapk Gene_EXP:TRIP10 14_20381224_T_G
erk_mapk Gene_EXP:TRIP11 1_230792766_C_G
erk_mapk Gene_EXP:TRIP6 17_78529677_G_C
erk_mapk Gene_EXP:TRMT2A 17_76280234_G_A
erk_mapk Gene_EXP:TSPAN32 2_182063828_G_C,4_147906782_T_C,22_45322160_A_G,9_32472897_A_G,8_22585148_A_G
erk_mapk Gene_EXP:TSPO 19_53224139_T_C
erk_mapk Gene_EXP:TSPYL2 2_42288248_A_G,11_33881066_C_A
erk_mapk Gene_EXP:TSR2 8_109271027_T_C,8_109271124_T_G
erk_mapk Gene_EXP:TTC1 5_155013898_A_G
erk_mapk Gene_EXP:TTC17 10_43164088_C_T,11_18534354_C_G
erk_mapk Gene_EXP:TTC3 12_66128870_G_A
erk_mapk Gene_EXP:TUBB 1_101786406_G_A
erk_mapk Gene_EXP:TUBE1 14_68909906_G_A,14_68910058_T_C,14_68910093_G_A
erk_mapk Gene_EXP:TXLNB 20_56366031_C_T
erk_mapk Gene_EXP:TXNL4A 11_124397016_A_G
erk_mapk Gene_EXP:UBA2 22_21634235_C_T
erk_mapk Gene_EXP:UBA7 21_42543649_A_G
erk_mapk Gene_EXP:UBAP1 5_31510999_G_T
erk_mapk Gene_EXP:UBE2H 2_9279286_C_T
erk_mapk Gene_EXP:USP21 22_22643666_C_G
erk_mapk Gene_EXP:USP30 5_70495058_G_T,6_57924451_G_T,X_71592597_A_T
erk_mapk Gene_EXP:USP9X 13_19026335_C_A
erk_mapk Gene_EXP:VANGL2 6_13182486_T_G
erk_mapk Gene_EXP:VCL 10_97936313_A_C
erk_mapk Gene_EXP:VIM 13_99295007_C_T,13_99314037_A_G
erk_mapk Gene_EXP:VIT 1_176944072_A_T
erk_mapk Gene_EXP:VPRBP 3_128945112_G_A
erk_mapk Gene_EXP:VPS37C 3_160416453_CT_C,5_146267624_CT_C,12_15623289_TA_T,13_37746457_TA_T
erk_mapk Gene_EXP:WASF3 15_67165360_A_G
erk_mapk Gene_EXP:WDR41 2_217818534_A_G
erk_mapk Gene_EXP:WFDC2 2_97152499_A_C,2_97152524_G_T,2_97152525_C_G,2_97152527_G_T,2_97152546_G_C
erk_mapk Gene_EXP:WHAMM 15_59207967_A_G,15_59207979_A_G,15_59207981_C_G,15_59207987_T_C
erk_mapk Gene_EXP:WIPI1 1_26457907_T_G
erk_mapk Gene_EXP:WNK3 2_86119057_G_A
erk_mapk Gene_EXP:WT1 9_33796659_C_T,9_33796705_C_G,9_33798019_A_G
erk_mapk Gene_EXP:YES1 1_16580833_G_T
erk_mapk Gene_EXP:ZBTB8OS 10_63177655_C_T,10_63217126_T_G,11_118198037_T_C,19_54632388_T_A,19_54632531_T_C
erk_mapk Gene_EXP:ZC3H12C 20_18452633_T_G
erk_mapk Gene_EXP:ZCCHC11 22_36566306_C_G
erk_mapk Gene_EXP:ZDHHC5 7_101136942_T_G,16_89729370_A_C
erk_mapk Gene_EXP:ZFHX2 9_27567147_C_T
erk_mapk Gene_EXP:ZFP82 3_33120406_C_T
erk_mapk Gene_EXP:ZHX3 7_72926354_C_T
erk_mapk Gene_EXP:ZMYND11 2_100964113_G_A
erk_mapk Gene_EXP:ZNF223 8_7564464_G_A
erk_mapk Gene_EXP:ZNF239 10_35032587_A_C
erk_mapk Gene_EXP:ZNF250 5_135888024_G_T
erk_mapk Gene_EXP:ZNF292 20_1445690_A_C,5_141193109_A_G,2_130342165_A_C,10_62069760_A_C,1_89935566_A_C
erk_mapk Gene_EXP:ZNF292 20_1445690_A_C,2_130342165_A_C,1_89935566_A_C,5_141193109_A_G,10_62069760_A_C
erk_mapk Gene_EXP:ZNF302 11_87157236_A_T
erk_mapk Gene_EXP:ZNF331 18_36818951_C_T
erk_mapk Gene_EXP:ZNF345 1_153772281_T_G,6_53654807_C_T
erk_mapk Gene_EXP:ZNF420 6_53654807_C_T
erk_mapk Gene_EXP:ZNF594 19_12433052_A_G
erk_mapk Gene_EXP:ZNF93 17_47361586_C_T,17_47402080_A_C
erk_mapk Gene_EXP:ZSCAN16 7_26185482_G_A
erk_mapk Gene_EXP:ZSCAN18 14_64741308_T_C
erk_mapk Gene_EXP:ZYX 11_129905704_C_T
[표 21]에 제시된 FRH 들이 해당 유전자(gene) 발현과의 상관도(P-value) 및 약물과의 상관도(P-value)를 산출한 결과가 아래 [표 22]에 정리되어있다.
또한, [표 21]에 제시된 FRH들이 포함되어 발현된 유전자들 중 주요 유전자와 각각의 ERK_MAPK 약물과의 상관도(P-value)를 산출한 결과가 도 34에 도시되어 있다.
이들 [표 22] 및 [도 34]로부터 [표 22] 및 [도 34]에 공통적으로 낮은 P-value값을 갖는 유전자(gene)에 포함된 FRH(s)가 ERK_MAPK 약물 반응성을 판단하기 위한 바이오마커로 실효성이 높은 것으로 판단할 수 있다.
DrugPathway GENE Variants Var _Drug( pval ) Var _ Exp ( Pval )
erk_mapk INHBE_1 chr12_57456335_T_G 5.77E-14 0.023018015
erk_mapk SMAP1_1 chr6_70773272_G_A 1.18E-08 0.029985176
erk_mapk SPRY4_1 chr5_142319698_T_G 6.07E-08 0.000420223
erk_mapk THEM4_1 chr1_151909409_A_C 8.56E-08 0.035981352
erk_mapk SERPINB1_1 chr6_2837820_C_G 1.44E-07 0.008676416
erk_mapk EIF2B3_1 chr1_44926782_G_C 7.36E-06 0.00572911
erk_mapk DUSP6_1 chr12_89350540_G_A 8.18E-06 0.001102792
erk_mapk TOLLIP_1 chr11_1295591_A_C 1.13E-05 0.041990571
erk_mapk CDC5L_1 chr6_44387945_G_A 0.000100417 0.000850114
erk_mapk PAPD7_1 chr5_6746131_C_G 0.000186035 0.046879537
erk_mapk ABHD2_1 chr15_89199849_C_A 0.000373834 0.002565266
erk_mapk PLEKHM1_1 chr17_45436185_C_G 0.002692591 0.035787973
erk_mapk SMC6_1 chr2_17731999_A_C 0.003115924 0.045907596
erk_mapk RNF38_1 chr9_36400965_C_G 0.004214532 0.007012003
erk_mapk METTL16_1 chr17_2415256_G_C 0.007239539 0.043637945
erk_mapk PARP2_5 chr14_20351190_T_A,chr14_20354336_G_T,chr14_20344985_T_C,chr14_20354983_A_C,chr14_20354994_T_C 0.0003461397642250317,0.008144629651779057,1.6511185678613746e-06,9.423861936900617e-06,4.248961897732616e-05 0.0026213592391782425,0.0343587058197046,0.0388723494826529,0.009448771221863612,0.035110640891692815
erk_mapk CRYL1_6 chr13_20439533_A_G,chr13_20439514_CA_C,chr13_20404113_C_G,chr13_20404176_A_C,chr13_20489466_A_C,chr13_20512438_C_G 0.0007457569282103447,0.04490288969730257,5.4112288097843236e-05,0.0004125161353078136,7.340308839823958e-10,0.0008144017559447111 0.02254568941445808,0.006925654927699,0.014412490268573512,0.0358490969666835,0.0036810252474824734,0.0005690585314639865
erk_mapk MBD2_2 chr18_54222304_G_C,chr18_54224621_A_C 0.0009174927734817775,0.003370522943374522 0.041746449937120685,0.0024467066581282037
erk_mapk NUCKS1_3 chr1_205727543_G_A,chr1_205720599_G_C,chr1_205719615_A_C 0.0019226380117114328,5.15182042228384e-07,5.169743185885884e-06 0.007966391204853542,0.0020116543690140926,1.829062095579077e-05
erk_mapk TMEM8A_4 chr16_377516_T_C,chr16_374277_G_A,chr16_377010_C_T,chr16_375326_T_G 0.0022458300017618115,0.0004991219763661549,0.008152821570691773,0.00033905970470333573 0.02280191742379471,0.008448241096869875,0.02464199505583077,0.03164430214292932
erk_mapk MCM8_5 chr20_5950428_T_C,chr20_5954739_T_C,chr20_5967525_G_A,chr20_5963301_T_G,chr20_5983067_T_G 0.002650766144390827,0.0020883309843753076,7.538671246466503e-12,0.0005138671174250025,0.00032159758644408336 0.02450503355623649,0.0030061115573713558,0.02006455848870967,0.0209284066776318,0.012878505995892143
erk_mapk COPS3_3 chr17_17280719_G_T,chr17_17249049_GAA_G,chr17_17280660_A_C 0.0027601645216709264,0.0055818454987667495,0.009754104106729505 0.019538058668087298,0.04875712280071096,0.02319033941785423
erk_mapk NEDD1_2 chr12_96937308_A_C,chr12_96936634_A_G 0.004287874507177774,0.0016187072229015974 0.019399114812349873,0.02229964139566365
erk_mapk HDAC6_3 chrX_48803171_T_G,chrX_48817284_T_G,chrX_48817251_CAA_C 0.007173863496387051,0.0004972749557463768,0.0027277691674834114 0.008701773238861378,3.6233113107314475e-06,0.00929153924222002
erk_mapk MRPL39_6 chr21_25592759_G_A,chr21_25601549_G_T,chr21_25603910_C_T,chr21_25603925_C_T,chr21_25604009_G_A,chr21_25599683_T_C 0.007753577611892022,0.0015571108862256187,0.005054758659783033,0.00740873550689033,0.005591788896050463,0.03750113388472616 0.033844596383331746,0.005711821633941189,0.043198910460816656,0.020407458243495952,0.026357543170222462,0.002961561939886723
erk_mapk ZBTB8OS_2 chr1_32621836_G_A,chr1_32634036_A_G 0.010623328091650126,0.005807902867508034 0.00035085154745507385,0.001609648081432905
erk_mapk SNRPC_3 chr6_34767901_T_C,chr6_34767875_CT_C,chr6_34767875_C_CT 0.016258858934554518,0.0255807459946655,0.008409734593854818 0.0021977163744789038,0.005833052025345314,0.047890724740450176
erk_mapk SH3TC2_5 chr5_149010200_G_A,chr5_149026823_T_C,chr5_149040673_A_C,chr5_149040676_A_C,chr5_149004975_C_T 0.036452606469764885,7.993368579087101e-05,1.313354358475822e-12,1.6742742304793365e-07,3.0188094863269486e-08 0.005163368200425915,0.02459748424962984,0.04603790254373362,0.03254802106345967,0.01898788013634638
erk_mapk NUP188_7 chr9_128970680_G_T,chr9_128981422_CT_C,chr9_128999694_A_C,chr9_128993243_C_G,chr9_129003287_A_C,chr9_128952722_CAAAA_C,chr9_128981422_CTT_C 0.03889727834709586,5.679744903985549e-07,0.00015792708806478532,0.00011477857081826123,0.006528287639189813,1.3483326927899365e-05,0.001011406252669107 0.006235319995753044,0.0026090470755132837,0.04562376131737803,0.034372383646284414,0.006351306341421021,0.030396670064505107,0.0486576378436576
erk_mapk PDCD5_2 chr19_32581360_T_C,chr19_32581212_C_G 1.0613555124907784e-06,0.01707686442489131 1.930613826710712e-05,0.00963168433129465
erk_mapk PCDH1_5 chr5_141865023_A_C,chr5_141864261_A_C,chr5_141864335_T_G,chr5_141854096_T_G,chr5_141864895_A_C 1.146087693284126e-13,2.954523514000492e-06,1.2399540998886776e-05,6.010776449757326e-05,1.3125365237964413e-06 0.00022379266342278662,0.0017861354200376558,0.02539846277902666,0.023845011173266668,0.014684779508972238
erk_mapk ARL6IP6_3 chr2_152718606_T_G,chr2_152718941_T_G,chr2_152718947_T_G 2.1444201135699293e-06,3.4179740940841686e-10,5.150737082224498e-05 1.916382486428584e-05,0.0014347496711839814,0.0018772601891545288
erk_mapk TPP1_3 chr11_6616021_T_G,chr11_6619456_A_C,chr11_6616207_T_G 3.898164047661344e-05,6.206193500590457e-06,7.13357999675385e-06 0.03721832122361987,0.0021180587349231865,0.022734527785541702
erk_mapk SLC35B2_2 chr6_44253096_A_C,chr6_44255584_T_G 4.1264755521968e-08,2.206940612751773e-06 0.045514675788588387,0.0354190738183241
erk_mapk ETV5_6 chr3_186057145_T_G,chr3_186057158_T_G,chr3_186105591_G_A,chr3_186064432_A_G,chr3_186057367_T_G,chr3_186057421_A_C 4.28224233645744e-14,2.8538105380699127e-12,3.537860306738235e-07,3.53456731728789e-05,8.933112160257351e-07,2.0618345030808515e-05 0.000899440048018852,5.426858809490545e-05,0.008678217049363252,0.012387170842740151,0.01078700094209001,0.04370939373064901
erk_mapk DUSP4_2 chr8_29340229_A_C,chr8_29337473_A_C 4.4035389796360024e-07,0.0013351841168008725 0.01853773742959819,0.013684370845169195
erk_mapk ST3GAL4_3 chr11_126408340_T_G,chr11_126406566_A_C,chr11_126424657_A_G 4.582342844339244e-12,1.1939071093750443e-06,6.212889562458534e-09 7.802484819683297e-05,0.006286854884921811,0.03738872157996522
erk_mapk SKP2_3 chr5_36183922_T_C,chr5_36168236_A_G,chr5_36168246_T_G 4.974059042110084e-09,2.3219549423702208e-12,1.6076332463417848e-08 0.008092624659189506,0.01597032245832584,0.022784487945753537
erk_mapk GPBP1_3 chr5_57230956_G_A,chr5_57231420_T_C,chr5_57251232_G_A 4.99115882517327e-06,1.8819931578981247e-06,2.491196233571318e-05 0.038048986044057084,0.04556667822911722,0.018325268985280727
erk_mapk CMTM7_2 chr3_32441841_T_G,chr3_32454197_C_G 5.20316947282785e-11,1.865488768400554e-06 0.022587609002975642,0.027278626571090647
erk_mapk LRP5_2 chr11_68429633_T_G,chr11_68448944_A_C 8.179359573414423e-10,2.733681134387847e-06 0.01579807768279053,0.024681714140317668
erk_mapk ETV4_2 chr17_43544973_A_C,chr17_43533230_T_G 8.216801793356959e-07,9.218453009083366e-06 0.025227174262734704,0.0007956602344066278
IGFR 약물에 대한 반응성 바이오 마커
Drug_Class Gene_exp 바이오마커 ( 발현조절변이세트 )
igfr Gene_EXP:ABAT 3_51381020_A_G,3_197683305_A_C,16_24930679_T_G,19_18216930_A_C
igfr Gene_EXP:ACVR1B 1_26457907_T_G
igfr Gene_EXP:ACVR1B 2_113934259_C_T,5_181155466_T_G,10_79312556_A_G,11_12162199_T_G,12_6818898_A_C
igfr Gene_EXP:ADAM9 3_165019547_G_T,11_12162199_T_G,10_11921140_T_G,5_181155466_T_G,12_51745916_T_G
igfr Gene_EXP:ADRB1 1_26457907_T_G
igfr Gene_EXP:AGBL5 1_224250187_A_G
igfr Gene_EXP:ANXA1 13_113159942_A_G,16_1817242_T_C,10_11921140_T_G,2_113934259_C_T,5_181155466_T_G
igfr Gene_EXP:ANXA5 5_181155466_T_G,9_69516199_A_C,12_51745916_T_G,13_113325635_A_G
igfr Gene_EXP:ASPH 2_105307612_A_C
igfr Gene_EXP:ATL3 13_113159942_A_G
igfr Gene_EXP:ATXN7L3B 15_65451964_A_G,2_108507561_T_G,12_57062993_T_G,2_113934259_C_T,5_181155466_T_G
igfr Gene_EXP:B4GALT1 11_65547388_T_G,13_113159942_A_G
igfr Gene_EXP:BCL7A 10_11921140_T_G,11_12162199_T_G,13_113159942_A_G
igfr Gene_EXP:BHLHE41 2_113934259_C_T
igfr Gene_EXP:BLVRB 15_20566681_C_G
igfr Gene_EXP:BSN 13_113159942_A_G,16_1817242_T_C
igfr Gene_EXP:C12orf23 16_72119226_C_G
igfr Gene_EXP:C12orf29 4_173528913_A_G,10_79312556_A_G,12_40313960_G_T,15_65451964_A_G
igfr Gene_EXP:C14orf93 20_42084724_T_C
igfr Gene_EXP:C2orf43 7_108023984_G_A,12_109800676_G_A,19_3281403_A_C,20_42084724_T_C
igfr Gene_EXP:C2orf44 7_108023984_G_A,7_108024001_C_T,11_65547388_T_G,14_55169342_TAAA_T
igfr Gene_EXP:CACNA2D2 17_76472531_A_C
igfr Gene_EXP:CCT2 12_40313960_G_T
igfr Gene_EXP:CD44 2_113934259_C_T,12_40313960_G_T,12_51745916_T_G,15_75524142_T_C
igfr Gene_EXP:CELSR1 13_98883961_C_T
igfr Gene_EXP:CENPV 5_181155466_T_G
igfr Gene_EXP:CEP68 8_12430448_C_T,13_113159942_A_G,17_55774876_T_G
igfr Gene_EXP:CIB1 1_149852603_A_G,1_150261398_T_G,13_113159942_A_G,16_1817242_T_C
igfr Gene_EXP:CLASP2 9_37887606_C_T,16_1817242_T_C
igfr Gene_EXP:CMPK1 16_18379704_T_G
igfr Gene_EXP:COQ10B 1_149852603_A_G,13_113159942_A_G
igfr Gene_EXP:CRABP1 7_72942379_A_C,9_69516199_A_C,12_40313960_G_T
igfr Gene_EXP:CSRP3 6_33801120_A_G
igfr Gene_EXP:DAP 12_51745916_T_G
igfr Gene_EXP:DCLRE1A 1_219979389_T_A
igfr Gene_EXP:DLG2 1_26457907_T_G,22_18847351_G_C,22_21127217_C_G
igfr Gene_EXP:DNMT3A 2_113934259_C_T,7_72942379_A_C,11_12162199_T_G
igfr Gene_EXP:DOK4 13_113159942_A_G
igfr Gene_EXP:DPP9 22_21127217_C_G
igfr Gene_EXP:DST 22_22643666_C_G
igfr Gene_EXP:E2F6 1_248122139_G_T,1_248122185_A_G,12_109800676_G_A
igfr Gene_EXP:EGFL7 22_22643666_C_G
igfr Gene_EXP:ELF4 2_108507561_T_G,8_28850143_T_G,13_113159942_A_G,16_30953637_A_C
igfr Gene_EXP:ELOVL1 9_37887606_C_T,13_113159942_A_G,16_1817242_T_C
igfr Gene_EXP:ELOVL5 11_12162199_T_G
igfr Gene_EXP:EML5 19_3281403_A_C
igfr Gene_EXP:FAM111A 16_1817242_T_C,13_113159942_A_G,2_108507561_T_G,10_11921140_T_G,8_7290003_A_C
igfr Gene_EXP:FBXO32 11_12162199_T_G,12_40313960_G_T
igfr Gene_EXP:FBXO41 5_427675_T_C,13_113159942_A_G,16_1817242_T_C
igfr Gene_EXP:FEV 2_71515762_T_C,2_105307612_A_C,13_113159942_A_G,16_1817242_T_C
igfr Gene_EXP:GAB2 1_451649_A_AG
igfr Gene_EXP:GARNL3 12_123632291_G_A
igfr Gene_EXP:GAS8 13_39724501_TA_T
igfr Gene_EXP:GATA2 13_113159942_A_G
igfr Gene_EXP:GBP1 11_12162199_T_G
igfr Gene_EXP:GDPD1 9_69516199_A_C
igfr Gene_EXP:GINM1 4_154328181_A_C,7_72942379_A_C,10_73803641_A_G,11_12162199_T_G
igfr Gene_EXP:GLCCI1 13_113159942_A_G,16_1817242_T_C
igfr Gene_EXP:GLIS3 2_66439901_A_C,8_7290003_A_C,8_41957277_G_C,10_50311228_T_G,11_65547388_T_G
igfr Gene_EXP:GPC2 5_141432375_A_C
igfr Gene_EXP:GTF2H5 3_165019547_G_T,16_15664675_G_T
igfr Gene_EXP:GTF2IRD1 13_99295924_C_A,16_4823959_A_C
igfr Gene_EXP:GTF3C2 7_128839939_T_G,7_159142364_T_G
igfr Gene_EXP:H2AFY2 1_213007133_T_G,10_11921140_T_G,11_12162199_T_G
igfr Gene_EXP:HEG1 1_54243266_A_G,11_12162199_T_G
igfr Gene_EXP:HOXD8 20_42084724_T_C
igfr Gene_EXP:HPCAL4 12_123194624_A_ATT
igfr Gene_EXP:ICA1 1_451649_A_AG
igfr Gene_EXP:IL10RB 11_65547388_T_G
igfr Gene_EXP:IMP4 10_133626801_G_T
igfr Gene_EXP:IQGAP1 3_128945112_G_A,5_181155466_T_G,8_122952205_T_G,13_113325635_A_G,19_9566733_T_G
igfr Gene_EXP:JAKMIP2 22_21127217_C_G
igfr Gene_EXP:JPH1 1_26457907_T_G,19_32643405_T_C
igfr Gene_EXP:KANK1 11_12162199_T_G
igfr Gene_EXP:KDELR1 17_62447686_C_T,19_57475779_A_C,X_49304797_C_G
igfr Gene_EXP:KHDRBS1 5_181155466_T_G,12_6818898_A_C
igfr Gene_EXP:KIDINS220 1_113549504_C_T,2_113934259_C_T
igfr Gene_EXP:KIF26A 7_159142364_T_G,10_11921140_T_G
igfr Gene_EXP:KIF3B 11_1017789_A_C
igfr Gene_EXP:KLHL18 4_174304301_G_A,13_110205476_C_T
igfr Gene_EXP:KLHL23 1_26457907_T_G,5_141432375_A_C
igfr Gene_EXP:LDLRAP1 16_55415_T_G
igfr Gene_EXP:LRPPRC 11_12162199_T_G,12_40313960_G_T
igfr Gene_EXP:MAPK8IP2 6_25669441_G_A
igfr Gene_EXP:MAST1 10_11921140_T_G
igfr Gene_EXP:MBTD1 2_113934259_C_T,11_65547388_T_G,12_57062993_T_G,15_65451964_A_G,17_55774876_T_G
igfr Gene_EXP:METAP2 2_208237181_GA_G
igfr Gene_EXP:MFHAS1 3_132507473_C_CT
igfr Gene_EXP:MSN 8_7290003_A_C,10_73803641_A_G
igfr Gene_EXP:MSRA 1_110340768_A_C
igfr Gene_EXP:MSTN 12_65210914_C_T
igfr Gene_EXP:MT2A 3_128945112_G_A,15_75524142_T_C,22_42212334_A_C,13_113159942_A_G,10_11921140_T_G
igfr Gene_EXP:MYRIP 7_36620896_CATGA_C
igfr Gene_EXP:NCEH1 6_151015603_C_G
igfr Gene_EXP:NEK6 10_50311228_T_G,11_12162199_T_G,13_39724512_C_T
igfr Gene_EXP:NFIX 10_101004037_A_C,12_109800676_G_A
igfr Gene_EXP:NINL 1_26457907_T_G,22_22643666_C_G
igfr Gene_EXP:NOTCH2 11_65547388_T_G,13_113159942_A_G
igfr Gene_EXP:NPC1 6_106621398_T_C
igfr Gene_EXP:NRTN 1_149813302_A_C
igfr Gene_EXP:OSTM1 11_12162199_T_G
igfr Gene_EXP:PAIP1 1_112659795_G_A
igfr Gene_EXP:PHOX2A 12_51745916_T_G
igfr Gene_EXP:PIP4K2A X_65956423_C_T
igfr Gene_EXP:PLAUR 7_72942379_A_C,11_12162199_T_G,12_51745916_T_G
igfr Gene_EXP:PLEKHF2 7_108023984_G_A
igfr Gene_EXP:PLIN3 11_12162199_T_G
igfr Gene_EXP:PLK2 1_26457907_T_G
igfr Gene_EXP:PLOD2 2_66439901_A_C
igfr Gene_EXP:PPIC 2_66439901_A_C
igfr Gene_EXP:PRICKLE2 11_65547388_T_G
igfr Gene_EXP:PRNP 12_51745916_T_G
igfr Gene_EXP:PSMB8 8_7290003_A_C,10_11921140_T_G,11_12162199_T_G,X_2856636_A_C
igfr Gene_EXP:PSMB9 10_11921140_T_G,11_12162199_T_G,16_55415_T_G,X_2856636_A_C
igfr Gene_EXP:PXDC1 7_159142364_T_G,11_65547388_T_G,13_113159942_A_G
igfr Gene_EXP:RHBDD2 1_26457907_T_G,22_30937565_T_G
igfr Gene_EXP:RHOC 1_149852603_A_G,5_181155466_T_G,13_113159942_A_G,17_55774876_T_G
igfr Gene_EXP:RPL13 20_42084724_T_C
igfr Gene_EXP:RUFY3 11_65547388_T_G
igfr Gene_EXP:RUNX2 11_12162199_T_G,15_75268724_T_G
igfr Gene_EXP:SAT1 12_40313960_G_T
igfr Gene_EXP:SESN1 8_93815432_A_C
igfr Gene_EXP:SLC10A3 13_113159942_A_G
igfr Gene_EXP:SLC25A43 1_54243266_A_G,8_7290003_A_C,19_7627786_T_G
igfr Gene_EXP:SMARCAD1 6_30705792_T_G,11_65547388_T_G,12_40313960_G_T,15_65451964_A_G,17_55774876_T_G
igfr Gene_EXP:SMARCB1 3_197683305_A_C,5_80744593_A_C,19_9566733_T_G
igfr Gene_EXP:SOAT1 2_61492168_C_A,5_38950065_A_T,5_181155466_T_G,12_40313960_G_T,17_51169925_C_T
igfr Gene_EXP:SOCS1 13_24501721_C_T
igfr Gene_EXP:SQSTM1 1_26774532_T_C,11_12162199_T_G,13_39724512_C_T
igfr Gene_EXP:SRSF7 7_108023984_G_A
igfr Gene_EXP:STAC3 12_65210914_C_T,14_22105305_C_A,15_62835784_G_A,X_299277_G_T
igfr Gene_EXP:STMN4 13_113159942_A_G,16_1817242_T_C,16_30953637_A_C
igfr Gene_EXP:STOX2 11_65547388_T_G,13_113159942_A_G,16_1817242_T_C,17_44212322_A_G
igfr Gene_EXP:SYT4 1_247949628_T_C
igfr Gene_EXP:TAP1 5_181155466_T_G,8_7290003_A_C,10_11921140_T_G,11_12162199_T_G,20_42084724_T_C
igfr Gene_EXP:TATDN3 2_87757451_T_TAA
igfr Gene_EXP:TDRD3 5_154409518_C_G
igfr Gene_EXP:TEKT2 1_26457907_T_G
igfr Gene_EXP:TET1 2_188994726_T_G,12_51745916_T_G,15_40767895_T_G,17_55774876_T_G
igfr Gene_EXP:TFPI 1_213007133_T_G,16_1817242_T_C
igfr Gene_EXP:TMBIM1 1_208039626_T_G,6_30329265_T_C,17_51169925_C_T,16_55415_T_G,7_72942379_A_C
igfr Gene_EXP:TMED9 11_12162199_T_G,13_113159942_A_G
igfr Gene_EXP:TMEM145 10_11921140_T_G,11_34452090_T_G
igfr Gene_EXP:TPMT 2_61492168_C_A,9_37887606_C_T,11_12162199_T_G
igfr Gene_EXP:TRMT61B 12_124473081_C_T
igfr Gene_EXP:TSSC1 2_113934259_C_T
igfr Gene_EXP:TTC9B 3_128945112_G_A,13_113159942_A_G,16_1817242_T_C,16_30953637_A_C
igfr Gene_EXP:UBXN7 1_26457907_T_G,22_24252424_G_C
igfr Gene_EXP:UST 4_70722781_C_T
igfr Gene_EXP:VPS36 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T,9_33798019_A_G
igfr Gene_EXP:WASF1 2_108507561_T_G,10_43200831_A_G,16_55415_T_G
igfr Gene_EXP:WDR35 12_109800676_G_A
igfr Gene_EXP:WNT5A 11_65547388_T_G
igfr Gene_EXP:WWOX 22_21127217_C_G
igfr Gene_EXP:ZBTB34 3_165019547_G_T
igfr Gene_EXP:ZNF195 2_113934259_C_T,12_40313960_G_T,12_51745916_T_G
igfr Gene_EXP:ZNF704 11_120836935_C_T
igfr Gene_EXP:ZNF74 17_55774876_T_G,11_65547388_T_G,5_181155466_T_G,2_113934259_C_T,1_234373536_T_G
igfr Gene_EXP:ZNFX1 11_125626705_T_G
[표 23]에 제시된 FRH 들이 해당 유전자(gene) 발현과의 상관도(P-value) 및 약물과의 상관도(P-value)를 산출한 결과가 아래 [표 24]에 정리되어있다.
또한, [표 23]에 제시된 FRH들이 포함되어 발현된 유전자들 중 주요 유전자와 각각의 IGFR 약물과의 상관도(P-value)를 산출한 결과가 도 35에 도시되어 있다.
이들 [표 24] 및 [도 35]로부터 [표 24] 및 [도 35]에 공통적으로 낮은 P-value값을 갖는 유전자(gene)에 포함된 FRH(s)가 IGFR 약물 반응성을 판단하기 위한 바이오마커로 실효성이 높은 것으로 판단할 수 있다.
DrugPathway GENE Variants Var _Drug( pval ) Var _ Exp ( Pval )
igfr SEPT6_1 chrX_119618658_T_G 1.08E-09 0.00240717
igfr EPHA2_1 chr1_16148437_A_C 2.39E-08 0.003022958
igfr VRK1_1 chr14_96853031_T_G 3.01E-06 0.034233405
igfr ACTR3_1 chr2_113934245_G_T 4.92E-06 0.01245207
igfr FOS_1 chr14_75280999_A_C 6.24E-06 0.001488063
igfr FCHO2_1 chr5_73082876_ATT_A 1.08E-05 0.029256929
igfr RAC1_1 chr7_6401802_T_G 2.22E-05 0.003141263
igfr CXCR5_1 chr11_118886492_C_G 6.30E-05 0.044645013
igfr KCNQ5_1 chr6_72622312_C_G 8.39E-05 0.005821769
igfr ACSS2_1 chr20_34920910_T_G 8.92E-05 0.038456731
igfr CRLF3_1 chr17_30792416_T_G 0.000107788 0.014789711
igfr TSEN34_1 chr19_54192354_T_G 0.000113175 0.001848481
igfr GTF2IRD1_1 chr7_74512993_A_G 0.000122837 0.006481631
igfr CECR1_1 chr22_17188516_G_C 0.000127223 0.003052868
igfr MAP4K1_1 chr19_38617327_T_G 0.000134054 0.013203631
igfr PAPSS2_1 chr10_87727355_T_G 0.000165034 0.012652487
igfr LAMC1_1 chr1_183131172_CAA_C 0.000221332 0.002417084
igfr TBX21_1 chr17_47742656_A_C 0.000232988 0.004538883
igfr PNRC2_1 chr1_23961703_G_C 0.000287734 0.015853081
igfr HSPG2_1 chr1_21885485_A_C 0.00029294 0.028105373
igfr CD72_1 chr9_35610848_A_C 0.000296281 0.049937736
igfr KLF3_1 chr4_38689006_A_C 0.000348148 0.015121455
igfr ZNRF3_1 chr22_29048501_A_C 0.000348188 0.024970519
igfr ASAP2_1 chr2_9399979_T_G 0.000416146 0.021780475
igfr CCDC69_1 chr5_151185396_T_C 0.000422551 0.005439839
igfr EPS15_1 chr1_51472751_T_G 0.000562256 0.00454227
igfr CBR1_1 chr21_36071267_G_C 0.000703843 0.005777456
igfr CST3_1 chr20_23634133_A_C 0.000813367 0.047435887
igfr IGF1R_1 chr15_98934682_T_G 0.00081535 0.004668174
igfr MEI1_1 chr22_41699656_A_C 0.000847426 0.019192604
igfr PTPN6_1 chr12_6946697_T_C 0.000924277 0.002400753
igfr PMEPA1_1 chr20_57700062_A_G 0.000939285 0.036764657
igfr WASL_1 chr7_123692324_GA_G 0.001014849 0.000396379
igfr ARHGAP15_1 chr2_143228433_T_C 0.001096444 0.039221572
igfr CLDN12_1 chr7_90413108_T_G 0.00113931 0.004520847
igfr UACA_1 chr15_70669470_GA_G 0.001211403 0.03571568
igfr TRIM2_1 chr4_153276097_A_G 0.001260338 0.011894098
igfr RCC2_1 chr1_17413487_C_A 0.001306044 0.02349276
igfr CD48_1 chr1_160711863_GA_G 0.001708644 0.04718285
igfr GLCE_1 chr15_69261053_A_G 0.001722968 0.004293961
igfr C21orf91_1 chr21_17793434_T_G 0.001758128 0.044828498
igfr SIGLEC10_1 chr19_51417063_T_G 0.00177184 0.045299996
igfr NCKAP1_1 chr2_182967372_CA_C 0.001831659 0.004822611
igfr CD86_1 chr3_122103557_A_C 0.001895858 0.046671667
igfr ERRFI1_1 chr1_8013331_A_G 0.001920351 0.000188249
igfr PTPRC_1 chr1_198703381_A_C 0.001955402 0.027037687
igfr CTDSPL_1 chr3_37957127_T_G 0.002306486 0.04933152
igfr TAF4B_1 chr18_26286027_C_A 0.00252716 0.005234164
igfr CDC42BPB_1 chr14_102939620_T_G 0.002756257 4.78E-05
igfr CTBP2_1 chr10_125026073_A_G 0.002878802 0.03391949
igfr RASAL3_1 chr19_15458567_G_C 0.003342618 0.038134018
igfr HLA-DOB_1 chr6_32813293_A_C 0.003408106 0.048853006
igfr WAS_1 chrX_48691219_A_C 0.00381355 0.02612273
igfr HBS1L_1 chr6_134965300_CA_C 0.004012929 0.010966837
igfr FCRL5_1 chr1_157518564_T_C 0.004367637 0.023539142
igfr UHRF2_1 chr9_6482002_G_T 0.004387102 0.007025127
igfr SPR_1 chr2_72891611_A_C 0.005381455 0.000101783
igfr DHX32_1 chr10_125867071_T_C 0.006025442 0.015306739
igfr DAG1_1 chr3_49531399_T_G 0.006122816 0.000829773
igfr RAVER2_1 chr1_64768580_T_G 0.007604338 0.049067483
igfr KIAA0922_1 chr4_153635457_C_T 0.007681106 0.042172485
igfr ITGAV_1 chr2_186637080_T_G 0.0079744 0.00113911
igfr MSL3_1 chrX_11772199_A_C 0.00797531 0.040182738
igfr LAPTM5_1 chr1_30733959_T_C 0.008095451 0.005337526
igfr TPBG_1 chr6_82364929_T_C 0.009219323 0.003828919
igfr CD52_1 chr1_26320120_TAA_T 0.009857578 0.041028395
igfr APOBEC3G_1 chr22_39086265_G_T 0.009915615 0.042244805
igfr ZNF107_1 chr7_64708051_G_A 0.010400777 0.013846694
igfr PALLD_1 chr4_168691310_GT_G 0.011706523 0.009714355
igfr WTAP_1 chr6_159753424_T_G 0.01384856 0.00215073
igfr HCLS1_1 chr3_121634273_T_G 0.019280657 2.45E-06
igfr AVPI1_1 chr10_97677649_A_G 0.021081758 0.001581419
igfr FAM129B_1 chr9_127578987_C_T 0.021421759 0.016089528
igfr SH3RF1_1 chr4_169096709_G_A 0.024084182 0.008799276
igfr DR1_1 chr1_93361899_T_A 0.025156433 4.48E-05
igfr CTTNBP2NL_1 chr1_112457049_C_A 0.028077079 0.00620874
igfr PPP3CC_1 chr8_22539268_TC_T 0.032546359 0.004572653
igfr WIPF1_1 chr2_174585550_T_G 0.037854213 0.000483959
igfr RNGTT_1 chr6_88769645_C_T 0.04013553 0.002545266
igfr CUEDC1_1 chr17_57873465_G_A 0.046175827 0.009658282
igfr TMEM106A_2 chr17_43216747_A_C,chr17_43216763_T_C 0.00010599595448116978,0.0011257303404920308 0.0005249300563644175,0.0005036765332449491
igfr ARHGAP9_2 chr12_57474996_G_A,chr12_57474460_G_A 0.00010627135291362362,0.0006872861852919692 0.036897912823510064,0.04135748735535435
igfr ARHGAP25_3 chr2_68775067_A_G,chr2_68818005_T_G,chr2_68818023_T_G 0.00011953760418312583,1.4150706205617486e-06,0.0059084060389890105 0.04538887525617117,0.0040433016624282225,0.00032630206809361283
igfr LMNA_2 chr1_156134461_T_G,chr1_156139242_AT_A 0.00013744315797654898,0.021258069595818274 0.029742625031540286,0.04237931129547261
igfr DAGLA_2 chr11_61734985_A_C,chr11_61728297_A_C 0.00016688573126791192,8.09952511657234e-05 0.004132304336839055,0.025660366426589504
igfr NR2F6_2 chr19_17240636_T_G,chr19_17232479_A_C 0.0002005112664246795,0.004658617789678825 0.0007905076911971658,0.04560309985715085
igfr PLEKHA1_2 chr10_122406608_C_A,chr10_122426897_T_G 0.0002168843436880945,0.005333013480801039 0.013835632948640248,0.02718721223708819
igfr APP_2 chr21_25881669_T_G,chr21_25881706_A_T 0.00025836883792981226,0.012490170798802495 0.0009005203285702301,0.007363278374314075
igfr ATP1B1_2 chr1_169127312_A_G,chr1_169131404_A_C 0.0002769045008439269,0.0004647954716516378 0.009381431280957959,0.04764456683437238
igfr IL10RA_2 chr11_117999603_A_C,chr11_117999569_T_G 0.0003635149788055047,0.002791509228208489 0.033136103226175016,0.042909053419655285
igfr ERICH1_7 chr8_658279_A_G,chr8_659132_C_G,chr8_659777_T_G,chr8_666991_A_G,chr8_673593_G_A,chr8_659879_A_C,chr8_664843_G_C 0.00036987702944603015,5.389836081615414e-05,0.042347501906470714,0.03423827293146818,0.002457155038695027,0.005217531740497581,0.03193881349739397 0.004174871941240723,0.0054140514901705895,0.007294372779032101,0.0012649483439199085,0.01865482112843118,0.0461414202945825,0.005281332497371782
igfr ITGB5_4 chr3_124769064_T_G,chr3_124809087_T_G,chr3_124817591_T_G,chr3_124859372_A_C 0.0004279586059829587,0.0005503781084358106,2.8998064871450438e-05,0.007293322508081707 0.0006588536356118503,5.4585187494895796e-05,0.004666117329251896,6.144253538463827e-06
igfr RFTN1_4 chr3_16357670_G_A,chr3_16369972_C_G,chr3_16433938_A_G,chr3_16316966_A_C 0.0005124144917873522,0.0007740692582134723,0.02739900235302105,1.3310696006188425e-05 0.014764917085914387,4.009218111239421e-08,9.30606513108498e-07,0.008243705342181723
igfr RBFOX2_4 chr22_35759903_A_G,chr22_35746471_A_C,chr22_35761128_GA_G,chr22_35745982_A_C 0.0005772251529531363,0.0026032665751075587,0.0005990432899641425,0.00370365047461572 0.0021501446732444386,0.003606660377686972,0.04845122900481105,0.009865449869643949
igfr VSIG10_3 chr12_118095590_T_G,chr12_118073908_T_G,chr12_118095640_G_C 0.0006180518934147943,0.000288504312752602,0.003668316042902092 0.013058144491121623,0.0019761216603789984,0.03443934455659579
igfr PLEKHG3_2 chr14_64741663_T_G,chr14_64743474_T_G 0.0007814263254356411,0.001157048611523175 5.022222887595109e-05,0.0004341351157000161
igfr ATP11A_7 chr13_112832759_A_G,chr13_112871823_T_C,chr13_112860417_A_C,chr13_112810736_A_C,chr13_112856140_A_C,chr13_112832768_A_C,chr13_112860332_A_C 0.0007951918344761818,0.0005482830943215422,0.0008173410245384687,0.00028609539850556404,0.0005652380914145368,0.01755140978606275,0.0026211055327575693 0.03593739412008719,0.030074291108272512,0.013638179892540932,0.02325523862538697,0.008605914805152383,0.0022773790348338983,0.006067631423556552
igfr RUNX3_2 chr1_24907301_T_G,chr1_24907326_T_G 0.0008468237773895464,0.006925491973632575 0.0479402881785652,0.03367486268556343
igfr CTTN_3 chr11_70419876_A_C,chr11_70419880_T_C,chr11_70407283_C_T 0.000966697322875658,3.5345921815367516e-05,0.005641133258474765 0.00030309409522359497,0.003131141961303907,0.005941149857145408
igfr CCDC28A_2 chr6_138785343_A_C,chr6_138792859_T_C 0.0013622718680866052,0.005185054082793079 0.011499421256994664,0.046299906365056015
igfr CD63_3 chr12_55725557_A_C,chr12_55725568_A_C,chr12_55727027_A_C 0.0015370519252913715,4.143328592583745e-05,0.0004442658715243917 0.006833645667760305,0.006277176385590093,0.0005016030317793939
igfr SCARB2_2 chr4_76179751_A_C,chr4_76179754_T_C 0.0016868597515864868,0.0015619118205883007 0.009508010711643462,0.003674712454161551
igfr TJP1_4 chr15_29737354_A_C,chr15_29761137_A_C,chr15_29761418_A_C,chr15_29718609_T_G 0.001722668303128766,0.001802650233952311,0.0039948883415691075,0.0004981143114140755 0.03635480241931981,0.005695684405240236,0.0032087876676378537,0.035918560945748516
igfr CD84_2 chr1_160549875_A_G,chr1_160550877_C_G 0.0018095916002787247,0.0007689474612337844 0.011914227680681896,0.04088607952168802
igfr IKZF1_3 chr7_50368194_A_C,chr7_50382645_A_C,chr7_50387420_G_C 0.0018105241430139086,0.014707321465940356,0.001698752501804824 0.008403541889994377,0.009343110426337882,0.005840601801883746
igfr LCP1_3 chr13_46143111_T_C,chr13_46143326_T_G,chr13_46143333_A_T 0.0018838737568387656,0.0030138622548272647,0.002533014213361492 0.004087453394348643,0.0014213406956657436,0.005160539969200112
igfr FAM177A1_2 chr14_35081207_T_C,chr14_35081218_T_C 0.0021562993680550448,0.0011900365723686852 0.020934419309292008,0.02682119468565008
igfr WDR91_2 chr7_135211631_T_C,chr7_135187272_A_C 0.0024692334154964657,0.032950442555311085 5.806021129546451e-05,0.006217596359933296
igfr KLHL6_3 chr3_183492078_A_C,chr3_183508233_G_T,chr3_183508495_A_C 0.0026331756981726236,0.022647868110278375,7.774725762863598e-05 0.03828309904439229,0.005722620392157443,0.025101287121564474
igfr ZNF543_2 chr19_57329179_A_G,chr19_57328339_A_C 0.002905904571144909,0.0017155256244295665 0.0030296713890405878,0.0008395371531401164
igfr PLEK_6 chr2_68380987_A_C,chr2_68380990_A_C,chr2_68386526_T_G,chr2_68388306_A_G,chr2_68388311_A_G,chr2_68395610_G_T 0.0029347945425916644,0.002463266314490245,0.0008850637706738338,9.333617954680645e-06,0.0006950651263355477,0.0073361864658662125 0.0018651167043750433,0.004434568689990568,0.0232360676072928,0.012112306050675708,0.028732570109628937,0.04207168924285536
igfr KDM4C_2 chr9_6990364_G_T,chr9_7103596_C_T 0.0029959320396048127,0.031190087077651845 0.01165227785409256,0.0003043755324224803
igfr STAG3_6 chr7_100197862_A_C,chr7_100197337_A_T,chr7_100197348_T_C,chr7_100201126_G_C,chr7_100180467_A_G,chr7_100202616_A_T 0.003032352954227882,0.0003006428065929603,0.0015227072304436168,7.395320763427399e-05,2.7805601294277643e-05,0.0008727651283899594 0.0017528283507844654,0.0366941229125814,0.023320205307304158,0.027602097077102532,0.04660308396540184,0.020109594472644786
igfr WDFY4_2 chr10_48733932_A_G,chr10_48709976_C_T 0.00343399726598083,0.014958425459696244 0.04160917875360734,0.036092320181802036
igfr PEX3_2 chr6_143462894_AT_A,chr6_143468044_A_T 0.0038068988591272368,0.004816984657632503 0.01772831437707046,0.001265609891969809
igfr FERMT3_2 chr11_64207498_T_G,chr11_64220073_T_G 0.004734854868796705,0.0003860702269228193 6.601869405274685e-06,0.034308160983635066
igfr ARHGAP5_3 chr14_32092970_T_C,chr14_32154828_T_C,chr14_32092963_G_C 0.00497062236861118,0.0024371349542205195,0.03352695059876293 0.000109609141495362,0.0028505632724505807,0.007275592799482284
igfr NGLY1_3 chr3_25733762_T_C,chr3_25736073_G_T,chr3_25732334_A_C 0.0050051985544428655,0.00013354579539043645,0.00040433124284776166 0.0004571643127465467,0.0001003348545752524,0.0008517116761761035
igfr NCKAP1L_3 chr12_54532103_A_T,chr12_54509948_A_C,chr12_54542688_G_C 0.005115130095563281,0.006142923665719964,0.003395761947631717 0.006178462220094093,0.01506335399115959,0.04657402586559346
igfr DCK_2 chr4_71023692_C_A,chr4_71022615_CTT_C 0.00551147320732032,0.003204858946259472 0.03456399228988244,0.04731976901534782
igfr CNOT10_2 chr3_32705030_A_G,chr3_32717271_G_A 0.005986207049477181,0.010027593265925021 0.0007110070373588129,0.0032142136890770555
igfr ZNF430_2 chr19_21033730_G_A,chr19_21022773_T_G 0.0060011071152059935,0.001269711279469131 3.875366882434858e-05,0.024171318376603662
igfr DIRC2_2 chr3_122795117_A_C,chr3_122856322_A_G 0.006254194164645703,0.003207873756680403 0.006533610459085206,0.013416690563532
igfr DENND1C_2 chr19_6469618_A_C,chr19_6466439_T_G 0.0067186287718049645,0.0016600261620732227 0.03949757317188018,0.022653353998851232
igfr MRPL39_3 chr21_25592788_C_A,chr21_25601549_G_T,chr21_25599683_T_C 0.007244177399862964,0.02581153853071456,0.006446955687932745 0.0040263096113157286,0.005711821633941189,0.002961561939886723
igfr POLH_2 chr6_43587207_T_G,chr6_43587205_A_G 0.007282790737761695,0.004119102235979657 0.002197498680435875,0.0001905626583652103
igfr LTBP3_4 chr11_65547976_T_G,chr11_65547974_A_G,chr11_65541348_A_C,chr11_65543270_A_C 0.008230993013661442,0.002905381602762654,3.41563836791927e-05,0.000404704876316852 0.0010020580443514707,0.013780067605462305,0.02423580877660449,0.030868539513201374
igfr CCND1_2 chr11_69650913_A_G,chr11_69643258_A_C 0.009099246706999426,0.0062885656582625715 0.024298615321604846,0.0008578909246964013
igfr CTNNA1_4 chr5_138812304_T_G,chr5_138933920_C_T,chr5_138932696_A_G,chr5_138812295_G_A 0.009367597372283164,6.3503870330673816e-06,0.025253708380473885,0.0007665667912501635 0.013339032203366944,0.00010488952235634391,0.007557173168109447,0.014548265287747147
igfr WDR7_2 chr18_56679573_T_G,chr18_56781547_G_A 0.00936770621562205,0.0029337854053434692 1.7583606026050092e-08,0.0071713352600959014
igfr RCL1_5 chr9_4844704_T_C,chr9_4844778_A_C,chr9_4849647_T_C,chr9_4860917_G_GT,chr9_4860980_G_A 0.01015934986765833,0.008166765063815772,0.013723578341305795,0.006228375621470136,0.0009546809601140933 0.001687161016128972,0.0053342789487147045,0.004306767506877943,1.3652309819438526e-05,0.014590769537426704
igfr ZCCHC14_5 chr16_87414470_A_C,chr16_87411666_T_C,chr16_87412604_T_G,chr16_87412609_T_G,chr16_87407905_T_G 0.01093006007749231,0.004904074942282202,0.0043682847900583565,0.00032200703750807235,0.00016922609654741882 0.007871655864135534,0.012673355773035487,0.00292819630706063,0.0093411624607831,0.04674575207321762
igfr TOM1L1_3 chr17_54937096_G_T,chr17_54937101_G_T,chr17_54947274_A_C 0.011389249245863157,0.02378503173158879,6.37493870407225e-05 0.0005351253630963304,4.7382046214109506e-05,0.0003719570020930906
igfr SVIL_2 chr10_29532000_A_C,chr10_29486218_G_T 0.014203541816552456,3.6685991514458535e-06 0.005199248570547408,0.02127330473082788
igfr TEAD4_2 chr12_3019250_C_T,chr12_3022032_A_C 0.02289390603064881,0.0001066489771189534 0.0016254072731388984,0.0001892435681560084
igfr ARHGAP30_2 chr1_161052161_T_G,chr1_161069551_T_G 0.026797750313656932,0.0002673414213531623 0.0011705834898046734,0.030642225735204174
igfr FMNL1_3 chr17_45232440_T_G,chr17_45238511_T_G,chr17_45238503_C_G 0.02756877460315332,0.0011473580213809565,0.0021134470829949274 0.006430399709476225,1.3130360508344227e-05,0.014111760701313713
igfr CD151_3 chr11_836023_C_T,chr11_836227_A_G,chr11_835877_C_T 0.031310628277621426,0.01189492161114428,0.0465236859230004 0.004311678571283407,0.001633994415617101,0.005759250847020773
igfr MBD2_2 chr18_54204938_G_A,chr18_54224621_A_C 0.032527518290623295,0.02387217907579878 0.007481293790069707,0.0024467066581282037
igfr ACAP1_2 chr17_7350305_C_T,chr17_7343627_T_G 0.03440244080220003,9.989468867792128e-05 0.009955377908509965,0.02484432576482206
igfr RHPN2_4 chr19_33002924_G_A,chr19_33044231_A_G,chr19_33044540_A_C,chr19_33011638_C_G 0.03758598191114063,6.498164345874758e-05,0.0019234652198936038,0.0005607094271426628 0.001694407500706198,0.0003445437417821702,0.0007353894363862997,0.0002119158667786005
igfr RASSF2_3 chr20_4797919_T_G,chr20_4784304_T_C,chr20_4784247_T_G 0.037902749156553485,0.011694257494444695,0.00032929741865870437 0.007153311060028534,0.0020239510039769416,0.0013542591543729706
igfr MYO1G_4 chr7_44965836_A_C,chr7_44970706_A_C,chr7_44964431_G_T,chr7_44979051_A_C 0.04191223689634028,0.01979144289427551,0.00017645318680118606,0.041733273291402466 0.007221347246269528,0.002699507313002306,0.005180419499391653,0.0010403929060933288
igfr PIK3CD_4 chr1_9720778_T_G,chr1_9720785_A_G,chr1_9719895_T_G,chr1_9718938_A_G 1.0253516427976307e-05,0.0046476512085552105,0.00011802831952668278,0.006759908616419049 0.0012148539768169404,0.0398063487615097,0.0044497374818740715,0.04703097613769788
igfr PTGR1_2 chr9_111594107_A_G,chr9_111578959_GAA_G 1.5065359948490627e-06,0.005936401163136037 0.00764869645742515,0.03809849817293055
igfr SH3D19_3 chr4_151122202_T_C,chr4_151148202_G_T,chr4_151175208_T_G 2.2029420860104835e-05,0.0016057485146252267,0.0049299501495510155 0.00026537095134489047,0.004030165987762314,0.036616308047703286
igfr DTNBP1_2 chr6_15662698_A_G,chr6_15662701_T_G 2.9366152452741533e-06,0.0006517798782510246 0.0063060334020981846,0.001004314451212422
igfr ZNRD1_3 chr6_30062280_G_A,chr6_30062358_G_A,chr6_30062412_T_A 3.654974597084793e-05,1.1618445697892011e-05,0.0003334426304369216 0.006713962039550535,0.011500969330972352,0.02821821301850212
igfr SPATS2L_7 chr2_200329386_C_A,chr2_200412288_CT_C,chr2_200329511_A_C,chr2_200412421_T_G,chr2_200412425_T_G,chr2_200477943_T_G,chr2_200473083_GAA_G 4.207550681496029e-05,0.0004415561732387749,2.0249110903712733e-05,6.324482115669083e-05,0.00042055460201680485,1.4403669192542887e-05,0.007061797305907755 0.0033487592228469143,0.011019446375268936,0.02491924164389806,0.03547678698863923,0.024316311222524558,0.016080388811817628,0.0009052273948575811
igfr ELOVL5_4 chr6_53295600_A_G,chr6_53295602_T_G,chr6_53291875_T_C,chr6_53291854_T_G 4.333948606334787e-05,9.154580881914281e-06,0.002303807174924029,0.010895023484809672 0.0008036056664569972,0.0007993551420952537,0.0030362229822457412,0.005396507263205953
igfr AGER_6 chr6_32183680_C_G,chr6_32183336_A_C,chr6_32180626_G_C,chr6_32182537_A_C,chr6_32182532_A_C,chr6_32180983_T_G 4.3474785520824183e-07,0.0008401867950240421,0.00012577188862559035,7.864018103130946e-05,0.0001383347487645318,0.0006412069737516832 0.026487158302874552,0.0008365781303084246,0.018710849801424196,0.024237923466307005,0.005092878554310726,0.028565251544064637
igfr KLHL18_3 chr3_47319581_T_G,chr3_47344095_C_A,chr3_47319585_T_G 5.8893512793953086e-05,0.003560559459732024,0.0014314792247920815 0.013218876001835087,0.0063137500959640856,0.0442868915202707
igfr RBM6_6 chr3_50054242_G_T,chr3_50054246_C_T,chr3_50054250_C_T,chr3_50054257_G_T,chr3_50054263_T_G,chr3_50066429_G_T 9.610797412978416e-06,0.0004692267600390496,0.001169115137001947,0.016014825049119413,0.00038946159538077817,6.545113568163317e-06 0.0124136469122058,0.0004024483543288937,3.272618868931358e-05,5.8729619078742086e-05,0.00033057063887385755,0.0016854676901857401
mitosis 약물에 대한 반응성 바이오 마커
Drug_Class Gene_exp 바이오마커 ( 발현조절변이세트 )
mitosis Gene_EXP:ACTN2 1_26457907_T_G,22_18847351_G_C,22_21127217_C_G
mitosis Gene_EXP:ACTR3B 19_5680513_A_C
mitosis Gene_EXP:ACVR1B 1_26457907_T_G
mitosis Gene_EXP:ACVR2B 20_10639627_G_A
mitosis Gene_EXP:ADA 13_113524119_TGTCA_T,13_113510211_T_C,13_113495576_T_C,13_113503637_G_T,13_113539563_C_T
mitosis Gene_EXP:ADRB1 1_26457907_T_G
mitosis Gene_EXP:AEBP1 6_72148713_GTT_G,13_24781827_GTT_GT,13_37746457_TAA_TA,20_34750522_TA_T,17_64858885_TA_T
mitosis Gene_EXP:AKAP7 1_26457907_T_G
mitosis Gene_EXP:ANO4 9_41294004_C_A
mitosis Gene_EXP:ARHGAP19 22_22643666_C_G
mitosis Gene_EXP:ARID1A 7_21862122_CT_C,11_63382198_CA_C
mitosis Gene_EXP:ARID2 1_26457907_T_G
mitosis Gene_EXP:AS3MT 7_20786651_GA_G,1_225419673_GA_G,5_95507014_TA_T,9_120989554_CT_C,2_11192112_CT_C
mitosis Gene_EXP:ATG4A 2_61492168_C_A,2_113934259_C_T,9_35398502_T_G,9_108900415_C_A,16_87644643_G_A
mitosis Gene_EXP:ATP2B3 1_26457907_T_G,17_7604041_A_C
mitosis Gene_EXP:ATP6V0A1 11_63382198_CA_C
mitosis Gene_EXP:ATXN7L3B 15_65451964_A_G,2_108507561_T_G,12_57062993_T_G,2_113934259_C_T,1_213007133_T_G
mitosis Gene_EXP:BCL11B 1_26457907_T_G,5_141432375_A_C,22_22643666_C_G
mitosis Gene_EXP:BDKRB1 22_22643666_C_G
mitosis Gene_EXP:C10orf25 17_39270861_TA_T
mitosis Gene_EXP:C17orf85 19_54909178_GA_G,1_52789915_CT_C,2_15396385_GA_G,6_7595008_AT_A,9_100450496_GT_G
mitosis Gene_EXP:C1orf54 8_22080213_T_C
mitosis Gene_EXP:C8orf33 1_152805392_A_G,1_152805488_G_A
mitosis Gene_EXP:CARHSP1 13_24781827_GTT_GT,14_68477626_CT_C
mitosis Gene_EXP:CCDC80 16_53649037_C_T
mitosis Gene_EXP:CCND3 7_151221500_CT_C,14_68477626_CT_C
mitosis Gene_EXP:CD44 1_26457907_T_G,1_149813302_A_C,6_151015603_C_G
mitosis Gene_EXP:CDC42EP3 22_21283300_G_C
mitosis Gene_EXP:CDK13 1_26457907_T_G,22_30937565_T_G
mitosis Gene_EXP:CDK2AP2 13_113159942_A_G
mitosis Gene_EXP:CEBPD 6_150926303_A_G
mitosis Gene_EXP:CEP85 1_109669334_C_T
mitosis Gene_EXP:CEP95 11_12162199_T_G,17_55774876_T_G
mitosis Gene_EXP:CFLAR 5_60605865_GA_G,7_28494789_G_T,9_130489245_A_T
mitosis Gene_EXP:CIB1 15_25177023_G_C
mitosis Gene_EXP:CLEC11A 5_179863845_T_G,16_46710765_T_A
mitosis Gene_EXP:CNTROB 13_97982483_AT_A,2_61498915_TA_T,3_37337179_CT_C,10_70860377_CT_C,5_64507681_TA_T
mitosis Gene_EXP:CRMP1 1_26457907_T_G,22_21127217_C_G
mitosis Gene_EXP:CRY1 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T,9_33798019_A_G,19_1057777_GA_G
mitosis Gene_EXP:CUX2 22_21127217_C_G
mitosis Gene_EXP:CXCL10 1_15726998_G_A,1_15729869_G_A
mitosis Gene_EXP:CYP2J2 1_26457907_T_G,5_141432375_A_C,15_42142087_A_C
mitosis Gene_EXP:CYP4F22 22_21127217_C_G
mitosis Gene_EXP:DENND4A 7_151221500_CT_C,19_1057777_GA_G,19_51416180_GA_G
mitosis Gene_EXP:DOCK10 18_76968158_T_C
mitosis Gene_EXP:DPCD 15_42211755_GA_G
mitosis Gene_EXP:DPP9 22_21127217_C_G
mitosis Gene_EXP:DTD1 2_15396385_GA_G,5_77411610_TA_T,10_113620724_G_A,11_63382198_CA_C
mitosis Gene_EXP:E2F5 8_22080213_T_C
mitosis Gene_EXP:ELOVL1 1_203683316_A_G,1_203698281_T_C
mitosis Gene_EXP:ENPP3 1_26457907_T_G,22_22643666_C_G
mitosis Gene_EXP:EPC1 19_6744459_C_G,19_42723940_A_C
mitosis Gene_EXP:ESF1 2_231163667_A_C,10_37197397_A_C,11_124877210_T_G,20_26081320_C_T
mitosis Gene_EXP:EVI2A 1_26457907_T_G
mitosis Gene_EXP:EVI2B 10_46462341_C_A
mitosis Gene_EXP:EWSR1 14_68477626_CT_C,17_39270861_TA_T
mitosis Gene_EXP:FAM114A1 2_217847583_C_T
mitosis Gene_EXP:FAM69A 4_105679196_A_C
mitosis Gene_EXP:FANCF 2_61492168_C_A
mitosis Gene_EXP:FEZF1 1_26457907_T_G,22_22643666_C_G
mitosis Gene_EXP:FLII 3_52520584_A_C
mitosis Gene_EXP:FLT3 2_110841381_C_T
mitosis Gene_EXP:FUCA2 1_26457907_T_G,5_141432375_A_C,22_18847351_G_C,1_219210601_T_G,22_22643666_C_G
mitosis Gene_EXP:FZD3 1_26457907_T_G
mitosis Gene_EXP:GBE1 1_26457907_T_G,22_22643666_C_G
mitosis Gene_EXP:GCNT1 1_26457907_T_G,22_22643666_C_G
mitosis Gene_EXP:GDPD1 9_69516199_A_C
mitosis Gene_EXP:GNA15 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T,9_33798019_A_G
mitosis Gene_EXP:GNAQ 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T
mitosis Gene_EXP:GPC2 5_141432375_A_C
mitosis Gene_EXP:H2AFY2 22_22643666_C_G
mitosis Gene_EXP:HEATR5A 4_106236542_TA_T,9_120989554_CT_C,3_9977055_TA_T,7_151221500_CT_C,7_77937691_AT_A
mitosis Gene_EXP:HIBADH 1_485270_G_A
mitosis Gene_EXP:HNRNPA0 7_20786651_GA_G,11_33353067_AT_A,20_34750522_TA_T,6_152444591_GA_G,15_42211755_GA_G
mitosis Gene_EXP:HOOK1 1_26457907_T_G
mitosis Gene_EXP:HYI 6_99568464_G_C,19_1057777_GA_G,15_34915209_AT_A,15_42211755_GA_G,7_151221500_CT_C
mitosis Gene_EXP:IFI30 14_77435415_G_GA
mitosis Gene_EXP:IKBIP 5_141636680_A_C
mitosis Gene_EXP:IMP4 10_133626801_G_T
mitosis Gene_EXP:INTS2 20_42084724_T_C
mitosis Gene_EXP:ITGA3 2_217847583_C_T,2_217847883_G_A,2_217848003_A_G
mitosis Gene_EXP:JAKMIP2 22_21127217_C_G
mitosis Gene_EXP:KANSL2 1_26457907_T_G,12_94248247_C_T
mitosis Gene_EXP:KDM1A 1_53923844_G_GT,1_53966346_G_A
mitosis Gene_EXP:KDM3B 6_43052450_G_A,6_43054205_C_T,6_43055633_T_C,11_117776746_C_G
mitosis Gene_EXP:KHSRP 4_119158232_G_A
mitosis Gene_EXP:KIAA1958 1_26457907_T_G
mitosis Gene_EXP:KIF15 15_100152748_G_A
mitosis Gene_EXP:KIF3B 11_1017789_A_C
mitosis Gene_EXP:KLHL25 3_129433338_GT_G,6_43525297_GT_G,13_97982483_AT_A,6_70861991_TA_T,16_30280420_GA_G
mitosis Gene_EXP:LGALS1 1_26457907_T_G,11_62825464_G_C,22_22643666_C_G
mitosis Gene_EXP:LGALS3 1_26457907_T_G,9_83001013_C_A,5_141432375_A_C,1_149813302_A_C,7_100760409_A_C
mitosis Gene_EXP:LIMS2 6_72148713_GTT_G,11_63382198_CA_C,3_196805277_CT_C,13_24781827_GTT_GT,13_37746457_TAA_TA
mitosis Gene_EXP:LMBR1L 7_72949311_A_C,12_109266204_T_G,20_35697711_A_C
mitosis Gene_EXP:LONRF1 1_26457907_T_G,15_42142087_A_C,22_21127217_C_G,22_22643666_C_G
mitosis Gene_EXP:LPAR6 12_131908770_A_C,X_136033510_GA_G
mitosis Gene_EXP:LRRC4B 16_3543521_G_A,16_3590476_C_T,16_3606556_G_A,22_21127217_C_G
mitosis Gene_EXP:MBTD1 2_113934259_C_T,11_65547388_T_G,12_57062993_T_G,15_65451964_A_G,17_55774876_T_G
mitosis Gene_EXP:MCF2 15_42142087_A_C
mitosis Gene_EXP:MSL2 5_64507681_TA_T,7_73465568_GA_G,8_73582883_GA_G,13_37746457_TAA_TA,13_37746457_TA_T
mitosis Gene_EXP:MYH9 1_26457907_T_G,22_21127217_C_G
mitosis Gene_EXP:MYL9 1_26457907_T_G
mitosis Gene_EXP:MYOM2 1_26457907_T_G
mitosis Gene_EXP:NASP 1_109669334_C_T
mitosis Gene_EXP:NBR2 7_142925619_A_G,7_142944295_A_G,19_3179506_A_C
mitosis Gene_EXP:NCKAP1L 1_26457907_T_G
mitosis Gene_EXP:NELL2 1_26457907_T_G,5_141432375_A_C
mitosis Gene_EXP:NINL 11_33353067_AT_A,13_24781827_GTT_GT,13_37746457_TAA_TA,13_37746457_TA_T
mitosis Gene_EXP:NNT 10_73696978_G_A
mitosis Gene_EXP:NPW 1_26457907_T_G,3_52520584_A_C,15_69422319_A_C
mitosis Gene_EXP:NRIP1 20_2817118_AG_A
mitosis Gene_EXP:NRM 11_4082830_A_C
mitosis Gene_EXP:NUDT10 1_26457907_T_G
mitosis Gene_EXP:NUDT16 1_26457907_T_G
mitosis Gene_EXP:NUP205 17_7604041_A_C
mitosis Gene_EXP:PATZ1 17_39270861_TA_T
mitosis Gene_EXP:PAWR 9_33797971_T_A,9_33797993_G_A,9_33797994_C_T
mitosis Gene_EXP:PCDH17 1_26457907_T_G,5_141432375_A_C
mitosis Gene_EXP:PDS5B 19_5654163_A_C
mitosis Gene_EXP:PELI2 11_63382198_CA_C,13_37746457_TAA_TA,18_21530536_TA_T,6_152444591_GA_G,19_11301321_TA_T
mitosis Gene_EXP:PIDD 19_7937889_G_A
mitosis Gene_EXP:PLEKHA4 7_2269556_T_A
mitosis Gene_EXP:PMP22 22_22117666_G_A,22_22117820_G_A
mitosis Gene_EXP:POU3F1 1_26457907_T_G,22_22643666_C_G
mitosis Gene_EXP:POU3F2 1_26457907_T_G,1_205381583_C_G,1_219210601_T_G,3_52520584_A_C,5_141432375_A_C
mitosis Gene_EXP:POU4F1 X_149503442_T_G
mitosis Gene_EXP:PPAPDC2 7_44964464_T_C,7_45064532_G_A
mitosis Gene_EXP:PRKAR2A 13_37746457_TAA_TA,18_74804139_CT_C,13_37746457_TA_T,7_73465568_GA_G,12_107746489_GT_G
mitosis Gene_EXP:PRKCA 14_39074610_T_TAAG
mitosis Gene_EXP:PTK7 2_202765379_CT_C
mitosis Gene_EXP:QSER1 1_15381304_A_C,13_79521022_A_T
mitosis Gene_EXP:RAB32 1_26457907_T_G,5_141477711_A_G,15_92992967_C_T
mitosis Gene_EXP:RAB9B 5_133070239_CT_C,11_63382198_CA_C,10_67956845_TA_T,13_37746457_TAA_TA,18_21530536_TA_T
mitosis Gene_EXP:RAD54L 1_109669334_C_T
mitosis Gene_EXP:RAP1GAP 1_26457907_T_G
mitosis Gene_EXP:RAVER2 1_26457907_T_G
mitosis Gene_EXP:RBM10 6_163478762_CT_C,7_77937691_AT_A,8_108228149_GA_G
mitosis Gene_EXP:RBM11 1_26457907_T_G,19_624780_A_G,8_109483107_T_G,5_141432375_A_C,12_52771095_C_G
mitosis Gene_EXP:RBM15B 5_75576972_GA_G,8_73582883_GA_G,10_67956845_TA_T,11_63382198_CA_C
mitosis Gene_EXP:RBM27 19_48617887_T_G
mitosis Gene_EXP:RCOR1 1_176702776_TGAGAGAGA_T
mitosis Gene_EXP:REPS2 1_32780201_C_G,1_32817174_C_A,16_67140459_A_G,16_67146210_G_C
mitosis Gene_EXP:RHBDD2 1_26457907_T_G,22_30937565_T_G
mitosis Gene_EXP:RHOC 1_26457907_T_G,5_141432375_A_C,22_22643666_C_G
mitosis Gene_EXP:RHOC 1_149852603_A_G,5_181155466_T_G,13_113159942_A_G,17_55774876_T_G
mitosis Gene_EXP:RIPK2 11_63382198_CA_C,6_152444591_GA_G,5_75576972_GA_G,10_67956845_TA_T,5_64507681_TA_T
mitosis Gene_EXP:RNF219 2_68528704_T_C,10_31363289_T_C,16_60358945_T_C
mitosis Gene_EXP:RPAIN 10_68691523_T_C
mitosis Gene_EXP:RPL19 2_61492168_C_A
mitosis Gene_EXP:RUNX1 9_33796659_C_T,9_33796705_C_G
mitosis Gene_EXP:RUNX1 1_26457907_T_G
mitosis Gene_EXP:SEC61G 19_2073455_A_C
mitosis Gene_EXP:SELRC1 12_40313960_G_T
mitosis Gene_EXP:SGSM2 2_63842143_GA_G,4_84631729_G_T,7_77256452_A_G,13_97982483_AT_A,16_84054421_T_C
mitosis Gene_EXP:SIRT4 1_26457907_T_G,11_120298301_A_C,15_89806436_T_G,19_32862451_C_T,19_32864163_A_G
mitosis Gene_EXP:SLAIN1 1_26457907_T_G,22_21127217_C_G
mitosis Gene_EXP:SLC25A29 5_70067144_CA_C,7_28494775_GT_G,11_63382198_CA_C,12_25215659_AT_A,21_32744756_GA_G
mitosis Gene_EXP:SLFN11 1_215675245_T_C
mitosis Gene_EXP:SMARCE1 6_38951533_A_G
mitosis Gene_EXP:SNRPB 8_119240272_G_C,12_9165341_A_C,20_36185166_C_G
mitosis Gene_EXP:SNX3 1_248441636_T_G
mitosis Gene_EXP:SOX4 6_152444591_GA_G,13_37746457_TAA_TA,17_39270861_TA_T
mitosis Gene_EXP:SPNS3 9_33796705_C_G
mitosis Gene_EXP:SRSF1 16_87644643_G_A
mitosis Gene_EXP:SRSF7 5_181333681_C_T
mitosis Gene_EXP:SSR3 8_26634739_T_G,16_23445257_T_C
mitosis Gene_EXP:STAG2 3_10819431_A_G
mitosis Gene_EXP:STMN1 1_109668049_G_T,1_109669334_C_T
mitosis Gene_EXP:STOML2 5_154027084_C_T,5_154033830_C_T,5_154053173_T_C
mitosis Gene_EXP:STOX1 9_67192757_GA_G
mitosis Gene_EXP:SWT1 1_26457907_T_G,8_109483107_T_G
mitosis Gene_EXP:SYNC 15_42142087_A_C
mitosis Gene_EXP:TFCP2 19_55796171_G_T
mitosis Gene_EXP:TFPI 6_47579334_T_TAA
mitosis Gene_EXP:TGS1 12_52771095_C_G
mitosis Gene_EXP:THEM4 2_53919250_GA_G,13_37746457_TAA_TA,18_74804139_CT_C,1_108982799_TA_T,1_74576942_TA_T
mitosis Gene_EXP:THOC1 1_44804312_T_G,8_68625531_T_G,17_5474687_A_C
mitosis Gene_EXP:TMEM81 19_7056560_G_T
mitosis Gene_EXP:TPMT 2_61492168_C_A,9_37887606_C_T,11_12162199_T_G
mitosis Gene_EXP:TRAM2 1_26457907_T_G,22_21127217_C_G
mitosis Gene_EXP:TRPM4 1_26457907_T_G,22_21127217_C_G,22_22643666_C_G
mitosis Gene_EXP:TTF1 8_28850105_GA_G,11_63382198_CA_C,6_152444591_GA_G,7_73465568_GA_G,13_37746457_TAA_TA
mitosis Gene_EXP:TYMS 9_5557708_T_C
mitosis Gene_EXP:UBASH3B 14_68477626_CT_C
mitosis Gene_EXP:UBE2H 2_9279286_C_T
mitosis Gene_EXP:UBXN7 1_26457907_T_G,22_24252424_G_C
mitosis Gene_EXP:USF1 1_225419673_GA_G,9_120989554_CT_C,20_34750522_TA_T,6_99369823_GA_G,17_46332538_GT_G
mitosis Gene_EXP:VAX1 1_26457907_T_G,22_21127217_C_G
mitosis Gene_EXP:VPS37D 7_72941936_T_C,1_26457907_T_G
mitosis Gene_EXP:ZC4H2 1_225419673_GA_G,9_120989554_CT_C,13_24781827_GTT_GT,13_37746457_TAA_TA,19_1057777_GA_G
mitosis Gene_EXP:ZCCHC5 22_22643666_C_G
mitosis Gene_EXP:ZDHHC17 1_26457907_T_G
mitosis Gene_EXP:ZDHHC17 1_248638477_A_T
mitosis Gene_EXP:ZFP82 11_1243593_T_C
mitosis Gene_EXP:ZNF195 2_113934259_C_T,12_40313960_G_T,12_51745916_T_G
mitosis Gene_EXP:ZNF22 2_97507111_G_A
mitosis Gene_EXP:ZNF367 12_48679260_CA_C
mitosis Gene_EXP:ZNF37A 5_55968325_C_G,17_60426085_G_C,18_6958610_T_C,1_89014072_G_A,2_96841990_T_C
mitosis Gene_EXP:ZNF445 9_33796659_C_T
mitosis Gene_EXP:ZNF84 22_46326503_T_C,22_46328661_T_C
mitosis Gene_EXP:ZNF862 1_26457907_T_G,22_22759034_G_A
mitosis Gene_EXP:ZSCAN2 2_61492168_C_A
[표 25]에 제시된 FRH 들이 해당 유전자(gene) 발현과의 상관도(P-value) 및 약물과의 상관도(P-value)를 산출한 결과가 아래 [표 26]에 정리되어있다.
또한, [표 25]에 제시된 FRH들이 포함되어 발현된 유전자들 중 주요 유전자와 각각의 MITOSIS 약물과의 상관도(P-value)를 산출한 결과가 도 36에 도시되어 있다.
이들 [표 26] 및 [도 36]로부터 [표 26] 및 [도 36]에 공통적으로 낮은 P-value값을 갖는 유전자(gene)에 포함된 FRH(s)가 MITOSIS 약물 반응성을 판단하기 위한 바이오마커로 실효성이 높은 것으로 판단할 수 있다.
DrugPathway GENE Variants Var _Drug( pval ) Var _ Exp ( Pval )
mitosis CYR61_1 chr1_85581605_TA_T 5.27E-05 0.000620768
mitosis MYB_1 chr6_135201764_A_C 0.000110474 0.008038119
mitosis MYH9_1 chr22_36302635_A_C 0.000236116 0.040823397
mitosis SNX24_1 chr5_123023772_TA_T 0.00028033 0.010215104
mitosis CHAF1A_1 chr19_4442532_T_C 0.000284751 0.010330163
mitosis CASP8AP2_1 chr6_89846678_CT_C 0.000313931 0.000126501
mitosis MTF2_1 chr1_93137118_TA_T 0.000462823 0.036903175
mitosis EGFR_1 chr7_55170771_T_G 0.000668389 0.004588325
mitosis ACVR1_1 chr2_157799371_CA_C 0.000905558 0.016548442
mitosis MED12_1 chrX_71132797_T_C 0.000941588 0.024279673
mitosis TRA2B_1 chr3_185921167_T_C 0.001087771 0.003158761
mitosis CYB5R3_1 chr22_42619486_G_T 0.001094814 0.002582708
mitosis NFX1_1 chr9_33303208_A_G 0.001100893 0.023431449
mitosis UACA_1 chr15_70669470_GA_G 0.001412253 0.03571568
mitosis MOK_1 chr14_102304907_T_C 0.001776612 0.001629205
mitosis RNF138_1 chr18_32123591_T_C 0.001798779 0.018606829
mitosis NMT2_1 chr10_15119275_A_C 0.002227268 0.015194231
mitosis DLG2_1 chr11_83980458_A_G 0.002667354 0.014824348
mitosis RIN2_1 chr20_19990244_G_A 0.002695061 0.013004393
mitosis DHX15_1 chr4_24540080_CT_C 0.003782084 0.012007783
mitosis CD276_1 chr15_73702902_T_G 0.00386155 0.020273648
mitosis HDAC2_1 chr6_113944423_T_C 0.004344928 0.041935697
mitosis PIAS4_1 chr19_4039058_G_C 0.005375712 0.037776153
mitosis ARHGAP15_1 chr2_143216291_G_A 0.005719356 0.035966273
mitosis STRBP_1 chr9_123266116_C_G 0.006459968 0.001078377
mitosis MYO1C_1 chr17_1484178_C_T 0.007569353 0.007802374
mitosis EPB41_1 chr1_29015578_GA_G 0.007616579 0.046541231
mitosis PRDM2_1 chr1_13823349_T_A 0.00796288 0.011003429
mitosis MDM4_1 chr1_204536848_GA_G 0.008010095 0.021420681
mitosis C1R_1 chr12_7091679_A_C 0.00873535 0.0246229
mitosis RGS16_1 chr1_182600365_T_G 0.009039587 0.036240935
mitosis KIFC3_1 chr16_57765532_T_G 0.009062011 0.038497261
mitosis NOTCH2_1 chr1_119922384_T_A 0.009876287 0.022769433
mitosis PRPF38A_1 chr1_52416794_T_G 0.012365097 0.004382879
mitosis U2AF1_1 chr21_43093000_GT_G 0.018718881 0.003527509
mitosis FNDC3B_1 chr3_172328905_GT_G 0.019450759 1.78E-05
mitosis ITPRIPL1_1 chr2_96325641_T_G 0.024457637 0.004828474
mitosis PRKCB_1 chr16_24174494_CT_C 0.029704271 0.000670802
mitosis GMEB1_1 chr1_28702335_T_A 0.031116839 0.003887013
mitosis IL6ST_1 chr5_55960635_CT_C 0.045023867 0.00567988
mitosis SRGAP1_1 chr12_64142411_T_C 0.046097342 0.006505853
mitosis DNMT1_1 chr19_10162649_G_A 0.048749303 0.001347433
mitosis NPC1_2 chr18_23540944_CT_C,chr18_23539283_G_A 0.00011218638512848764,6.166244499849825e-05 0.040822963170832685,0.020956228007299703
mitosis KDM2B_2 chr12_121579943_C_CA,chr12_121534367_T_A 0.0002469480356989407,0.00024928370737718086 0.01794421156168876,0.01671856514998881
mitosis MET_3 chr7_116740945_T_G,chr7_116757685_T_G,chr7_116795676_T_G 0.00037055097855276256,0.003772251227706767,0.04454843008676103 0.00017295700570667475,5.0554093231126755e-05,0.0006156874780574698
mitosis WWTR1_2 chr3_149669685_C_T,chr3_149669894_G_A 0.0006147608436462098,0.0050779807840600905 0.040303211258058205,0.014886977556994025
mitosis RPRD2_2 chr1_150470594_A_C,chr1_150473591_C_T 0.0006254084658607492,0.029513176305296374 0.04999439760188915,0.008299610316019734
mitosis PHIP_9 chr6_78946845_A_T,chr6_78965984_A_G,chr6_78947674_G_A,chr6_78954723_T_C,chr6_78955493_T_A,chr6_78969860_A_G,chr6_78985312_C_T,chr6_78998206_C_T,chr6_79043075_T_C 0.0007025290839441325,0.0008446291153155781,0.010121938819521418,0.017201835088518632,0.014930588444064525,0.02454094082336056,0.009915783788926756,0.0023583595976247713,0.011026610846676282 0.0325055100647953,0.0325055100647953,0.0010048550446085317,0.00648756713202656,0.009594339103514994,0.0017203137452171692,0.0007527047164367361,0.006763071535609179,0.0016364259457283912
mitosis USP37_2 chr2_218485635_CAAAA_C,chr2_218455538_T_G 0.0008931966771009113,0.00047307780771944745 0.04869664909579453,0.006248282014078397
mitosis RRAS_3 chr19_49636811_C_T,chr19_49636835_G_A,chr19_49636989_C_A 0.0012180086241795427,0.0008453114718541902,0.00389443225116509 0.011066495702872568,0.008806050890865063,0.010977696307794636
mitosis SHPRH_7 chr6_145910334_C_A,chr6_145922445_C_T,chr6_145923607_A_G,chr6_145947487_T_A,chr6_145948270_A_C,chr6_145955343_T_G,chr6_145922945_GT_G 0.0015751671472739686,0.008305307007300559,0.003356044877090312,0.00413644978183887,0.009574107378650136,0.0002467850170635296,0.0028322412885894953 0.0007641881109242402,0.0008695206428685066,0.0004025103622500861,0.0002754715942379004,0.020534325332750382,0.0019437040989644704,0.0032085441168495693
mitosis LAMB2_2 chr3_49132472_A_C,chr3_49126013_T_G 0.0017423458459882547,0.041025181157896495 0.0019625130257961386,0.002569958840604656
mitosis THRAP3_2 chr1_36288866_G_C,chr1_36282396_ATTT_A 0.0020512788997300887,0.0016248690625818355 0.0001317384338547229,0.04220913139330165
mitosis CTNNA1_2 chr5_138932696_A_G,chr5_138932714_T_G 0.002692413567981528,0.005472909098268261 0.007557173168109447,0.0016091365079487266
mitosis TAPT1_2 chr4_16162866_G_A,chr4_16202603_GA_G 0.002918386893883101,0.000914379509289869 0.000763966557961968,0.0004886648390188492
mitosis SLC35F5_3 chr2_113717856_GA_G,chr2_113742699_CA_C,chr2_113723196_TA_T 0.003014076668232333,0.005012402765669162,0.0170410099009839 0.01701812431912492,6.159712513106605e-06,0.009792441988171948
mitosis CCAR1_3 chr10_68737016_C_A,chr10_68747145_CT_C,chr10_68760969_CT_C 0.00325467857819848,0.025692165325181263,0.0016743825966123902 0.003954046326130957,0.007417608363424872,0.007417608363424872
mitosis TADA1_2 chr1_166858437_T_C,chr1_166869276_TA_T 0.003257661220538658,0.007643004397209361 0.012600985482671512,0.00358370659710894
mitosis SAFB_2 chr19_5668433_GT_G,chr19_5653276_T_G 0.0039066263073592,0.0014480393694902619 0.0026106809691974946,0.018733735357902476
mitosis LEPROTL1_2 chr8_30105682_AT_A,chr8_30156243_A_C 0.005708636597504029,0.014522072472209685 0.02256500634957293,3.3209275234199355e-06
mitosis SQSTM1_3 chr5_179833009_G_A,chr5_179822433_T_C,chr5_179832842_G_C 0.005980563650762417,9.139203270628232e-06,0.04751023288058377 0.03979973429187952,0.0024949336391905503,0.0024314650981475784
mitosis PLEC_10 chr8_143935900_T_G,chr8_143916360_A_G,chr8_143917054_T_G,chr8_143918739_A_C,chr8_143919099_A_G,chr8_143975295_A_G,chr8_143919088_C_G,chr8_143925285_C_T,chr8_143927138_G_A,chr8_143930017_C_T 0.006797512530240399,0.023847093097519808,0.003689478164571844,0.04007075765894598,0.03700251313887589,0.004544202282444686,0.03720602259473315,0.00047050570860322235,4.768364655899894e-05,0.0001893462141118206 0.0004960012901022363,0.00910116635228719,0.025072704488480143,2.138708286444241e-05,0.0010288222361061275,0.039226625991533134,0.009415988048366521,0.005460087145469642,0.008162873576760793,0.001268625363946227
mitosis CTSA_2 chr20_45893486_C_CT,chr20_45894873_G_C 0.006806775220314732,0.009189197205389115 0.0011092438036515453,2.1137755776974608e-05
mitosis RND3_2 chr2_150471770_GA_G,chr2_150487464_GA_G 0.006850825677580675,0.002608896214858801 0.004413096667547799,0.009852344084866441
mitosis DOCK1_3 chr10_127409601_G_A,chr10_127248143_T_C,chr10_127248024_G_T 0.0069346786852210966,0.001954876992257982,0.00010052759289672492 0.021839153568346648,0.030500963727912844,0.020184142497530616
mitosis MYOF_2 chr10_93341723_C_T,chr10_93379679_T_C 0.007420864833221702,0.007547951219247403 1.0154009952651607e-05,0.0006543495060757152
mitosis PDS5B_2 chr13_32758091_C_T,chr13_32675925_C_A 0.0075589035603876795,0.0017607048342993868 0.0023301391981286807,0.004241708828197667
mitosis HEXB_3 chr5_74696784_G_A,chr5_74715459_CT_C,chr5_74715716_T_A 0.007745014587458687,4.786425040147315e-06,8.479985392616748e-06 0.037654298343869685,0.0009700644073606587,0.0006894634360309071
mitosis TANC1_2 chr2_159136061_C_T,chr2_159174959_G_C 0.00802472531176929,0.006460757964179747 0.017357470848779515,0.02749828370491698
mitosis ASPH_2 chr8_61642872_G_A,chr8_61638365_TA_T 0.009092096160092012,2.1941312888430133e-05 9.242250914202104e-05,0.0033421074285719613
mitosis GSN_2 chr9_121326794_T_G,chr9_121318750_T_C 0.009209877230841344,0.005427091425517584 0.014858234163842209,0.01549301533305157
mitosis ZNF292_3 chr6_87258847_A_G,chr6_87260583_C_G,chr6_87257934_G_C 0.0095880085401273,0.002653056510702511,0.037301685006945806 0.03664575782437445,0.02762172574455939,1.3565314335396872e-05
mitosis DTNBP1_2 chr6_15662660_G_A,chr6_15651411_GA_G 0.016540725603977957,0.0034858875216863218 0.005994085134454578,0.0014349866138238813
mitosis SUGP2_2 chr19_19025732_C_T,chr19_19008374_A_C 0.023033529177264773,0.0007995182905667767 0.008182273259557721,0.003040780848236827
mitosis ARID1B_5 chr6_157084627_G_A,chr6_157084796_G_A,chr6_156935454_GT_G,chr6_156779132_C_G,chr6_157206255_A_C 0.023572130650620228,0.0065953837312734045,0.00024483625735866694,0.0017474661626312965,0.008386743713695547 0.002480449952777213,0.003319459056638543,0.031030935390966245,0.0436791475273224,0.02302848816217332
mitosis DAZAP1_3 chr19_1432575_T_C,chr19_1432578_A_C,chr19_1421326_T_G 0.025717426655995912,0.012380456372647609,0.005697517435006497 0.008783799588482919,0.004625103934387489,0.03399063425366008
mitosis FAM76B_2 chr11_95786079_T_C,chr11_95787545_T_C 0.026712661661121014,0.007093482411673812 0.008842917440325095,0.006738523037696958
mitosis CNTRL_3 chr9_121175323_T_C,chr9_121167492_C_T,chr9_121123912_AT_A 0.02777922136116125,0.03429035595633583,0.009987376618823514 0.008182636643218607,0.0016137010941682265,0.04001035208622377
mitosis IQCB1_4 chr3_121788384_A_T,chr3_121807190_T_G,chr3_121781663_A_T,chr3_121781662_C_A 0.02873631298848243,0.04311975747619515,0.0034541658078948746,0.0008249500332497977 0.0011523884052119758,0.0035712731344638405,0.03680371502100786,0.031208890653500118
mitosis RRBP1_2 chr20_17636886_T_C,chr20_17643440_G_A 0.03507251839152679,0.01991260739356573 1.9056892828600246e-06,0.0037236305333221867
mitosis ZNF84_2 chr12_133048690_A_T,chr12_133048009_C_G 0.037210990330289934,0.040160599243354515 0.0028259388562976405,0.008314464537214374
mitosis MYCBP2_2 chr13_77098982_T_G,chr13_77061586_T_C 0.03744183774757608,0.00310540257860121 0.0038229074053839733,0.030373685856290068
mitosis CALD1_3 chr7_134933124_A_G,chr7_134891710_CTT_C,chr7_134941283_GAAA_G 1.0681523332046643e-06,0.0055155972985149685,0.0008159520917689481 0.034156156662500686,0.006749784168432884,0.007042501841739691
mitosis RBMX_5 chrX_136874303_G_C,chrX_136874308_C_T,chrX_136876571_C_A,chrX_136880660_G_A,chrX_136879426_ATG_A 5.449363562924237e-05,3.4887046700057416e-07,6.172396284131506e-05,0.0054727241117358974,0.005573036956662709 0.0383480406291467,0.029837740684056712,0.015245783387880662,0.03540981223032282,0.0056729536604581
mitosis POLR2B_3 chr4_57005538_CA_C,chr4_57023798_AT_A,chr4_57024870_CT_C 5.482928793734288e-06,0.02167722586394588,0.0009543180256774695 0.018564114826717992,0.007472844031288456,0.0012756499136273938
mitosis SECISBP2_3 chr9_89319872_A_G,chr9_89325866_A_T,chr9_89348180_T_G 6.195560569127674e-05,0.0006584940331716795,0.0021577193257759702 0.020014055406942226,0.00642217291639139,0.01739212501206905
mitosis FBXO41_2 chr2_73258961_C_G,chr2_73264474_A_C 7.08184621839895e-05,0.008886058285019023 0.010646018841909207,0.014910469893708134
mitosis TSPAN4_2 chr11_844057_C_G,chr11_865650_C_G 8.251559449584364e-05,0.0042898689776822594 0.04166717005266338,0.02401170518473186
한편, 도 23에는 [표 1]에서 정리한 6개 암타입과 [표 14]에서 정리한 6개 약물타입에 대한 약물의 동반진단을 위한 바이오마커 검출에 사용되는 검사칩을 제작하는 방법이 도시되어 있다.
도 23에 도시된 바와 같이, 제1단계에서, [표 1] 및 [표 14]에 특정된 암타입 및 약물타입에 대한 각 바이오마커들에 대한 진단칩을 제작하거나, 상기 암타입 및 약물타입에 대한 모든 바이오마커만들거나 혹은 전체 을 모두 하나의 칩을 제작하고, 환자로부터 약물타입 또는 암타입과 관련된 FRH 마커에 대하여, 도 18의 도시된 실시예(혈액암의 약물타입 중의 하나인 EGFR pathway) 약물반응과 연관이 높은 한 세트의 FRH 및 특정암에 연관성이 높은 전체 FRH를 사용하여, 도 20의 Linear Regression 예측모델을 생성하는 형식으로 약물반응성을 예측할 수 있다. 따라서, 본 특허에서 정리한 12개 암타입(CancerClass) 및 18개 약물타입(DrugClass)에 특이한 FRH 바이오마커들을 이용하여 다양한 암 및 암약물 동반진단 칩을 도 23처럼 제작하여 활용할 수 있다.
최종적으로, 본 발명을 요약하면, 본 발명은 기능 하플로타입 정보를 활용하여 약물반응성 예측 모델을 계산하기 위해, 검사 대상 유전체로부터 수집된 염기서열에서 다수의 변이들을 활용하여 기능 하플로타입 들을 계산하는 단계와: 기능 하플로타입과 약물반응성 정보간의 선형 회귀 모델의 해를 계산하는 단계와; 이러한 해를 이용하여 효과적으로 암 약물 중에 민감성이 높은 암 약물을 필터링하는 가상임상(In Silico Clinical Trial)을 위한 약물 반응성 예측 방법에 관한 것이다.
용어의 설명
본 발명에서 약물타입(DrugClass)에 대한 정의는 약물 표적들의 타입(type) 및 약물의 관능기적 유사한 기능 타입, 혹은, 약물이 영향을 주는 범주의 유전자그룹, 약물 패스웨이(drug pathway) 혹은 약물 시그널링 패스웨이(drug signaling pathway), 등은 모두 하나의 통칭 약물타입(DrugClass)로 설명 하는 용어이다. FRH는 기능하프로타입(functionally related relative haplotype)을 나타내는 용어이고, eQTL은 발현에 대한 양적형질위치 (expression quantitative trait loci)을 나타내는 용어이며, FRH(Exp|IC50)는 과/저(over/under) 발현된 군집에 대한 IC50의 평균값을 나타내는 용어이고, FRH(CNV|IC50)는 증폭/삭제(amplification/deletion) 군집에 대한 IC50의 평균값을 나타내는 용어이며, FRH(loci|IC50)는 주어딘 loci타입 군집에 대한 IC50의 평균값을 나타내는 용어이고, GDSC는 Genomics of Drug Sensitivity in Cancer을 나타내는 용어이며, CCLP는 COSMIC Cell Lines Project을 나타내는 용어로 웹페이지 http://cancer.sanger.ac.uk/cell_lines로부터 확인할 수 있고, CNV는 복제수변이(Copy number variation)을 나타내는 용어이며, GBLscan는 암동반진단마커 스켄(Cancer Biomarker Labeling Scan)을 나타내는 용어이고, ISCT는 가상임상(In Silico Clinical Trial)을 나타내는 용어이다.
본 발명의 권리는 위에서 설명된 실시예에 한정되지 않고 청구범위에 기재된 바에 의해 정의되며, 본 발명의 분야에서 통상의 지식을 가진 자가 청구범위에 기재된 권리범위 내에서 다양한 변형과 개작을 할 수 있다는 것은 자명하다.
본 발명은 암을 포함하는 질병 관련 특이 유전자 변이 지문 (Genetic Variation Fingerprints)과 약물의 분자 약리관능기의 결합분석에 의해 약물의 반응성을 신뢰성 있게 예측할 수 있는 새로운 선형 회귀 모델인 약물 적응증 및 반응 예측 시스템 및 방법인 GBLscan (Genetic Biomarker Scan)에 관한 것으로, 본 발명에 의하면, 본 발명에서는 체외 및 체내 임상시험으로부터 수집되는 유전체에 대한 약물의 반응성 결과들로부터, 약리 효과가 밝혀지지 않은 유전체와 약물의 반응성 정도를 예측할 수 있는 효과가 있다.

Claims (1)

  1. 혈액암 약물에 대한 반응성 판단을 위하여,
    [표 2]에 기재된 마커 중 어느 하나 이상을 포함하여 구성됨을 특징으로 하는 암 약물 반응성 판단을 위한 바이오 마커.
KR1020190096410A 2018-10-18 2019-08-07 암 약물 반응성 판단을 위한 바이오 마커, 이를 이용한 암 약물 반응성 판단 방법 및 이를 위한 암 약물 반응성 진단칩 KR20200044677A (ko)

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KR1020190098165A KR20200054058A (ko) 2018-10-18 2019-08-12 암 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 암 약물 반응성 판단 방법 및 암 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩
KR1020190098536A KR20200045020A (ko) 2018-10-18 2019-08-13 육종암 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 육종암 약물 반응성 판단 방법 및 육종암 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩
KR1020190098551A KR20200044680A (ko) 2018-10-18 2019-08-13 Chromatin 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 chromatin 약물 반응성 판단 방법 및 chromatin 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩
KR1020190098597A KR20200044683A (ko) 2018-10-18 2019-08-13 Mitosis 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 mitosis 약물 반응성 판단 방법 및 mitosis 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩
KR1020190098508A KR20200054855A (ko) 2018-10-18 2019-08-13 뇌종양 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 뇌종양 약물 반응성 판단 방법 및 뇌종양 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩
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KR1020190098492A KR20200054059A (ko) 2018-10-18 2019-08-13 암 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 암 약물 반응성 판단 방법 및 암 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩
KR1020190098525A KR20200054856A (ko) 2018-10-18 2019-08-13 폐암 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 폐암 약물 반응성 판단 방법 및 폐암 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩
KR1020190098498A KR20200044678A (ko) 2018-10-18 2019-08-13 여성암 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 여성암 약물 반응성 판단 방법 및 여성암 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩
KR1020190098569A KR20200054857A (ko) 2018-10-18 2019-08-13 Egfr 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 egfr 약물 반응성 판단 방법 및 egfr 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩
KR1020190098517A KR20200043891A (ko) 2018-10-18 2019-08-13 두경부암 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 두경부암 약물 반응성 판단 방법 및 두경부암 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩
KR1020190098585A KR20200044682A (ko) 2018-10-18 2019-08-13 Igfr 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 igfr 약물 반응성 판단 방법 및 igfr 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩
KR1020190098577A KR20200044681A (ko) 2018-10-18 2019-08-13 Erk_mapk 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 erk_mapk 약물 반응성 판단 방법 및 erk_mapk 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩
KR1020190098541A KR20200044679A (ko) 2018-10-18 2019-08-13 Abl 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 abl 약물 반응성 판단 방법 및 abl 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩
PCT/KR2019/013717 WO2020080871A2 (ko) 2018-10-18 2019-10-18 암 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 암 약물 반응성 판단 방법 및 암 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩
KR1020210107667A KR20210103452A (ko) 2018-10-18 2021-08-13 혈액암 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 혈액암 약물 반응성 판단 방법 및 혈액암 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩

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KR1020190098492A KR20200054059A (ko) 2018-10-18 2019-08-13 암 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 암 약물 반응성 판단 방법 및 암 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩
KR1020190098508A KR20200054855A (ko) 2018-10-18 2019-08-13 뇌종양 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 뇌종양 약물 반응성 판단 방법 및 뇌종양 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩
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KR1020190098525A KR20200054856A (ko) 2018-10-18 2019-08-13 폐암 약물 반응성 판단을 위한 바이오 마커 조성물, 바이오 마커 조성물을 이용한 폐암 약물 반응성 판단 방법 및 폐암 약물 반응성 판단을 위한 바이오 마커 조성물 검출용 진단칩
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* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
KR102222520B1 (ko) * 2020-09-04 2021-03-05 연세대학교 산학협력단 약물 반응성 예측용 조성물 및 이의 용도
KR102222521B1 (ko) * 2020-09-04 2021-03-05 연세대학교 산학협력단 약물 반응성을 예측하는 방법
KR20210114219A (ko) * 2020-03-10 2021-09-23 연세대학교 산학협력단 약제 내성 진단용 바이오 마커 조성물 및 이를 이용한 진단 키트

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WO2023282305A1 (ja) 2021-07-08 2023-01-12 ダイキン工業株式会社 耐油剤組成物

Non-Patent Citations (61)

* Cited by examiner, † Cited by third party
Title
(001) Forbes, S. A., et al. COSMIC: somatic cancer genetics at high-resolution. Nucleic Acids Research. 45, 777-783 (2017).
(002) Lawrence, M. S., et al. Discovery and saturation analysis of cancer genes across 21 tumour types. Nature. 505, 495-501 (2014).
(003) Stratton, M.R., Campbell, P.J. & Futreal, P.A. The cancer genome. Nature 458, 719-724 (2009).
(004) Williams SP, & McDermott U. The pursuit of therapeutic biomarkers with high-throughput cancer cell drug screens. Cell Chemical Biology. 24, 1066-1074 (2017).
(005) Barretina, J, et al. The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity. Nature. 483, 603-7 (2012).
(006) Yang, W., et al. Genomics of Drug Sensitivity in Cancer (GDSC): a resource for therapeutic biomarker discovery in cancer cells. Nucleic Acids Research. 41, 955-961 (2013).
(007) Basu, A., et al. An interactive resource to identify cancer genetic and lineage dependencies targeted by small molecules. Cell. 154, 1151-1161 (2013).
(008) Iorio, F., et al. (2016). A Landscape of pharmacogenomic interactions in cancer. Cell. 166, 740-754 (2016).
(009) Garnett, M. J., Edelman, E. J., Heidorn, S. J., Greenman, C. D., Dastur, A., Lau, K. W., Greninger, P., Thompson, I. R., Luo, X. & Soares, J. Systematic identification of genomic markers of drug sensitivity in cancer cells. Nature. 483, 570-575 (2012).
(010) Menden, M.P., Iorio, F., Ballester, P.J., Saez-Rodriguez, J., Garnett, M., McDermott, U., & Benes, C.H. Machine learning prediction of cancer cell sensitivity to drugs based on genomic and chemical properties. PLoS ONE. 8. e61318 (2013).
(011) Rubio-Perez, C., Tamborero, D., Schroeder, M., Antolin, A., Deu-Pons, J., Perez-Llamas, C., Mestres, J., Gonzalez-Perez, A., & Lopez-Bigas, N. In silico prescription of anticancer drugs to cohorts of 28 tumor types reveals targeting opportunities. Cancer Cell. 27, 382-396 (2015).
(012) Seashore-Ludlow, B., et al. Harnessing connectivity in a large-scale small-molecule sensitivity dataset. Cancer Discovery. 5, 1210-1223 (2015).
(013) Yadav, B., et al. Quantitative scoring of differential drug sensitivity for individually optimized anticancer therapies. Scientific Reports. 4 (2015).
(014) Vanhaelen, Q., et al.. Design of efficient computational workflows for in silico drug repurposing. Drug Discovery Today. 22, 210-222 (2017).
(015) Mamoshina, P., Vieira, A., Putin, E. & Zhavoronkov, A. Applications of deep learning in biomedicine. Molecular Pharmaceutics. 13, 1445-1454 (2016).
(016) Ramsundar, B., Kearnes, S., Riley, P., Webster, D., Konerding, D. & Pande, V. Massively multitask networks for drug discovery. arXiv:1502.02072 (2015).
(017) Dahl, G. E., Jaitly, N. & Salakhutdinov, R. Multi-task neural networks for QSAR predictions. arXiv:1406.1231 (2014).
(018) Nantasenamat C, Isarankura-Na-Ayudhya C, Naenna T, Prachayasittikul V. "A practical overview of quantitative structure-activity relationship". Excli J. 8: 7488(2009).
(019) Ebuka, D Quantitative structureactivity relationship study on potent anticancer compounds against MOLT-4 and P388 leukemia cell lines, Journal of Advanced Research, 10.1016(2016)
(020) Yuan, Y., et al. DeepGene: an advanced cancer type classifier based on deep learning and somatic point mutations. BMC Bioinformatics. 17, 243-256 (2016).
(021) Smalley, E. AI-powered drug discovery captures pharma interest. Nature Biotechnology. 35, 604-605 (2017).)
(022) Baskin, I.I., Winkler, D. & Tetko, I.V. A renaissance of neural networks in drug discovery. Expert Opinion on Drug Discovery. 11, 785-95 (2016).
(023) Gonczarek, A., Tomczak, J.M., Zareba, S., Kaczmar, J. Dabrowski, P. & Walczak, MJ. Learning deep architectures for interaction prediction in structure-based virtual screening. NIPS, 30, (2016).
(024) Pereira, J. C., Caffarena, E. R., & Dos Santos, C. N. Boosting docking-based virtual screening with deep learning. Journal of Chemical Information and Modeling. 56, 2495-2506 (2016).
(025) Unterthiner, T, Mayr, A, Klambauer, G, Steijaert, M, Wegner, J.K., Ceulemans, H, & Hochreiter, S. Deep learning as an opportunity in virtual screening. NIPS, 27, (2014).
(026) Wen M., Zhang Z., Niu S., Sha H., Yang R., Lu H., & Yun Y. Deep-learning-based drug-target interaction prediction. Journal of Proteome Research. 16, 1401-1409 (2017).
(027) Aliper A, Plis S, Artemov A, Ulloa A, Mamoshina P, & Zhavoronkov A. Deep learning applications for predicting pharmacological properties of drugs and drug repurposing using transcriptomic data. Molecular Pharmaceutics. 13, 2524-2530 (2016).
(028) Ching, T., et al. Opportunities and obstacles for deep learning in biology and medicine. bioRxiv. doi: http://dx.doi.org/10.1101/142760 (2017).
(029) Yap CW. PaDEL-Descriptor: An open source software to calculate molecular descriptors and fingerprints. Journal of Computational Chemistry. 32, 1466-1474(2011)
(030) Schneider, G.; Clement-Chomienne, O.; Hilfiger, L.; Schneider, P.;Kirsch, S.; Bohm, H-J. and Neihart, W. Virtual Screening for Bioactive Molecules by Evolutionary De Novo Design Angew. Chem. Int. Ed., 39, 4130-4133(2000)
(031) Schneider, G.; Lee, M-L.; Stal, M. and Schneider, P. De novo design of molecular architectures by evolutionary assembly of drug-derived building blocks J. Comp-Aid. Mol. Des., 14, 487-494(2000)
(032) Pearlman, S. R. and Smith, K. M. Novel Software Tools for Chemical Diversity, Perspectives in Drug Discovery and Design, 9/10/11: 339-353,(1998).
(033) Burden, F. R. Molecular identification number for substructure searches, J. Chem. Inf. Comput. Sci. 29 , 225-7(1989).
(034) SIFT: Kumar, Prateek, Steven Henikoff, and Pauline C. Ng. "Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm." Nature protocols 4.7: 1073-1081(2009).
(035) Polyphen-2 : I. A. Adzhubei, S. Schmidt, L. Peshkin et al., method and server for predicting damaging missense mutations,Nature Methods, vol. 7, no. 4, pp. 248249, 2010
(036) LRT S. Chun and J. C. Fay, of deleterious mutations within three human genomes,Genome Research, vol. 19, no. 9, pp. 15531561, 2009.
(037) Polyphen-2 HDIV n HDVAR Score: Yunos, R. I. M., Ab Mutalib, N. S., Khor, S. S., Saidin, S., Nadzir, N. M., Razak, Z. A., & Jamal, R. (2016). Characterisation of genomic alterations in proximal and distal colorectal cancer patients (No. e2109v1). PeerJ Preprints.
(038) MutationAccessor1: Reva, B., Antipin, Y., & Sander, C. (2011). Predicting the functional impact of protein mutations: application to cancer genomics. Nucleic acids research, 39(17), e118-e118.
(039) MutationAccessor2: Gnad, F., Baucom, A., Mukhyala, K., Manning, G., & Zhang, Z.. Assessment of computational methods for predicting the effects of missense mutations in human cancers. BMC genomics, 14(3), S7(2013).
(040) MUTATIONTASTER: Dong, C., Wei, P., Jian, X., Gibbs, R., Boerwinkle, E., Wang, K., & Liu, X. Comparison and integration of deleteriousness prediction methods for nonsynonymous SNVs in whole exome sequencing studies. Human molecular genetics, 24(8), 2125-2137(2014).
(041) MutationAccessor and Mutation Taster: Oishi, Maho, et al. "Comprehensive Molecular Diagnosis of a Large Cohort of Japanese Retinitis Pigmentosa and Usher Syndrome Patients by Next-Generation SequencingDiagnosis of RP and Usher Syndrome Patients by NGS." Investigative ophthalmology & visual science 55.11 (2014): 7369-7375.
(042) PhyloP46way_placental and PhyloP46way_vertebrate: Pollard, Katherine S., et al. "Detection of nonneutral substitution rates on mammalian phylogenies." Genome research 20.1: 110-121(2010).
(043) GERP++_RS Score: Davydov, E. V., Goode, D. L., Sirota, M., Cooper, G. M., Sidow, A., & Batzoglou, S.. Identifying a high fraction of the human genome to be under selective constraint using GERP++. PLoS computational biology, 6(12), e1001025(2010).
(044) B62 Score: Tsuda, H., Kurosumi, M., Umemura, S., Yamamoto, S., Kobayashi, T., & Osamura, R. Y. HER2 testing on core needle biopsy specimens from primary breast cancers: interobserver reproducibility and concordance with surgically resected specimens. BMC cancer, 10(1), 534(2010).
(045) Siphy : Garber, Manuel, et al. "Identifying novel constrained elements by exploiting biased substitution patterns." Bioinformatics 25.12: i54-i62(2009).
(046) CHASM : H. Carter, J. Samayoa, R. H. Hruban, and R. Karchin, of driver mutations in pancreatic cancer using cancerspecific high-throughput annotation of somatic mutations (CHASM),Cancer Biology & Therapy, vol. 10, no. 6, pp. 582587(2010).
(047) Dendrix: F. Vandin, E. Upfal, and B. J. Raphael, novo discovery of mutated driver pathways in cancer,Genome Research, vol. 22, no. 2, pp. 375385(2012).
(048) MutsigCV: M. S. Lawrence, P. Stojanov, P. Polak et al., heterogeneity in cancer and the search for new cancer-associated genes,Nature, vol. 499, no. 7457, pp. 214218. [68] M. Kanehisa and S. Goto, kyoto encyclopedia(2013)
(049) FATHMM: Shihab, Hashem A., et al. "Predicting the functional, molecular, and phenotypic consequences of amino acid substitutions using hidden Markov models." Human mutation 34.1: 57-65(2013).
(050) VEST3_score: Carter, Hannah, et al. "Identifying Mendelian disease genes with the variant effect scoring tool." BMC genomics 14.3: S3(2013).
(051) MetaSVM: Nono, Djotsa, et al. "Computational Prediction of Genetic Drivers in Cancer." eLS (2016).
(052) MetaLR : Dong, Chengliang, et al. "Comparison and integration of deleteriousness prediction methods for nonsynonymous SNVs in whole exome sequencing studies." Human molecular genetics 24.8: 2125-2137(2014).
(053) CADD: Kircher, Martin, et al. "A general framework for estimating the relative pathogenicity of human genetic variants." Nature genetics 46.3: 310-315(2014).
(054) CADD 2 : Velde, K. Joeri, et al. "Evaluation of CADD scores in curated mismatch repair gene variants yields a model for clinical validation and prioritization." Human mutation 36.7: 712-719(2014).
(055) CADD 3: Mather, Cheryl A., et al. "CADD score has limited clinical validity for the identification of pathogenic variants in non-coding regions in a hereditary cancer panel." Genetics in medicine: official journal of the American College of Medical Genetics (2016).
(056) ParsSNP: Kumar, Runjun D., S. Joshua Swamidass, and Ron Bose. "Unsupervised detection of cancer driver mutations with parsimony-guided learning." Nature genetics 48.10: 1288-1294(2016).
(057) Deep Learning: Yann Lecun, Y., Bengio, Y. & Hinton, G. Nature. 521, 436-444 (2015)
(058) Cancer Drug Response Profile scan (CDRscan): A Deep Learning Model That Predicts Drug Effectiveness from Cancer Genomic Signature: Yoosup Chang, Scientific Report,. 8857 (2018)
(059) Genome-scale signatures of gene interaction from compound screens predict clinical efficacy of targeted cancer therapies. Peng Jiang, et al., Cell Systems, 6,1-12 (2018)
(060) eQTL: Maud Fagny, et al., PNAS, E7841-E7850 (2017)
(061) pQTL: Jerome Carayol, et al., Nat Commun., 8:2084 (2017)

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* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
KR20210114219A (ko) * 2020-03-10 2021-09-23 연세대학교 산학협력단 약제 내성 진단용 바이오 마커 조성물 및 이를 이용한 진단 키트
KR102222520B1 (ko) * 2020-09-04 2021-03-05 연세대학교 산학협력단 약물 반응성 예측용 조성물 및 이의 용도
KR102222521B1 (ko) * 2020-09-04 2021-03-05 연세대학교 산학협력단 약물 반응성을 예측하는 방법

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Gillis et al. Exceptional Edges matrices from" Guilt by Association" Is the Exception Rather Than the Rule in Gene Networks Gillis, J. and Pavlidis, P.(2012) PLoS Computational Biology, 8 (3).