JP7853277B2 - スルホン化dnaの精製 - Google Patents

スルホン化dnaの精製

Info

Publication number
JP7853277B2
JP7853277B2 JP2023505706A JP2023505706A JP7853277B2 JP 7853277 B2 JP7853277 B2 JP 7853277B2 JP 2023505706 A JP2023505706 A JP 2023505706A JP 2023505706 A JP2023505706 A JP 2023505706A JP 7853277 B2 JP7853277 B2 JP 7853277B2
Authority
JP
Japan
Prior art keywords
dna
solution
acidic
sulfonated
binding
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Active
Application number
JP2023505706A
Other languages
English (en)
Japanese (ja)
Other versions
JP2023536085A (ja
JP2023536085A5 (https=
Inventor
エム. ラグランド,エヴァン
ギャグラット,ズービン
ジェイ. ドマニコ,マイケル
Original Assignee
エグザクト サイエンシーズ コーポレーション
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by エグザクト サイエンシーズ コーポレーション filed Critical エグザクト サイエンシーズ コーポレーション
Publication of JP2023536085A publication Critical patent/JP2023536085A/ja
Publication of JP2023536085A5 publication Critical patent/JP2023536085A5/ja
Application granted granted Critical
Publication of JP7853277B2 publication Critical patent/JP7853277B2/ja
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1003Extracting or separating nucleic acids from biological samples, e.g. pure separation or isolation methods; Conditions, buffers or apparatuses therefor
    • C12N15/1006Extracting or separating nucleic acids from biological samples, e.g. pure separation or isolation methods; Conditions, buffers or apparatuses therefor by means of a solid support carrier, e.g. particles, polymers
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1003Extracting or separating nucleic acids from biological samples, e.g. pure separation or isolation methods; Conditions, buffers or apparatuses therefor
    • C12N15/1006Extracting or separating nucleic acids from biological samples, e.g. pure separation or isolation methods; Conditions, buffers or apparatuses therefor by means of a solid support carrier, e.g. particles, polymers
    • C12N15/1013Extracting or separating nucleic acids from biological samples, e.g. pure separation or isolation methods; Conditions, buffers or apparatuses therefor by means of a solid support carrier, e.g. particles, polymers by using magnetic beads
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2523/00Reactions characterised by treatment of reaction samples
    • C12Q2523/10Characterised by chemical treatment
    • C12Q2523/125Bisulfite(s)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2527/00Reactions demanding special reaction conditions
    • C12Q2527/119Reactions demanding special reaction conditions pH
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2527/00Reactions demanding special reaction conditions
    • C12Q2527/125Specific component of sample, medium or buffer

Landscapes

  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Biomedical Technology (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Molecular Biology (AREA)
  • Plant Pathology (AREA)
  • Biophysics (AREA)
  • Microbiology (AREA)
  • Physics & Mathematics (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Solid-Sorbent Or Filter-Aiding Compositions (AREA)
JP2023505706A 2020-07-29 2021-07-29 スルホン化dnaの精製 Active JP7853277B2 (ja)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US202063058179P 2020-07-29 2020-07-29
US63/058,179 2020-07-29
PCT/US2021/043769 WO2022039904A2 (en) 2020-07-29 2021-07-29 Purification of sulfonated dna

Publications (3)

Publication Number Publication Date
JP2023536085A JP2023536085A (ja) 2023-08-23
JP2023536085A5 JP2023536085A5 (https=) 2024-08-05
JP7853277B2 true JP7853277B2 (ja) 2026-04-28

Family

ID=80323147

Family Applications (1)

Application Number Title Priority Date Filing Date
JP2023505706A Active JP7853277B2 (ja) 2020-07-29 2021-07-29 スルホン化dnaの精製

Country Status (8)

Country Link
US (1) US20240026341A1 (https=)
EP (1) EP4189086B1 (https=)
JP (1) JP7853277B2 (https=)
KR (1) KR20230041000A (https=)
CN (1) CN116157519A (https=)
AU (1) AU2021329235A1 (https=)
CA (1) CA3186515A1 (https=)
WO (1) WO2022039904A2 (https=)

Families Citing this family (13)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP2816122A1 (en) 2008-02-15 2014-12-24 Mayo Foundation For Medical Education And Research Detecting neoplasm from a stool sample
US8361720B2 (en) 2010-11-15 2013-01-29 Exact Sciences Corporation Real time cleavage assay
CA2902916C (en) 2013-03-14 2018-08-28 Mayo Foundation For Medical Education And Research Detecting neoplasm
CN120700143A (zh) 2014-03-31 2025-09-26 梅奥医学教育和研究基金会 检测结直肠赘生物
US10184154B2 (en) 2014-09-26 2019-01-22 Mayo Foundation For Medical Education And Research Detecting cholangiocarcinoma
US10435755B2 (en) 2015-03-27 2019-10-08 Exact Sciences Development Company, Llc Detecting esophageal disorders
CN114574585A (zh) 2015-08-31 2022-06-03 梅约医药教育及研究基金会 检测胃肿瘤
CN108350485A (zh) 2015-10-30 2018-07-31 精密科学发展有限责任公司 血浆dna的多重扩增检测测定以及分离和检测
CN109563546B (zh) 2016-05-05 2022-09-09 精密科学发展有限责任公司 通过分析甲基化dna来检测肺肿瘤
JP7277460B2 (ja) 2017-11-30 2023-05-19 マヨ ファウンデーション フォア メディカル エデュケーション アンド リサーチ 乳癌の検出
US10648025B2 (en) 2017-12-13 2020-05-12 Exact Sciences Development Company, Llc Multiplex amplification detection assay II
CA3127329A1 (en) 2019-01-24 2020-07-30 Mayo Foundation For Medical Education And Research Detecting endometrial cancer
US11702704B2 (en) 2019-10-31 2023-07-18 Mayo Foundation For Medical Education And Research Detecting ovarian cancer

Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2004089195A (ja) 2002-08-29 2004-03-25 F Hoffmann La Roche Ag 亜硫酸水素塩処理のための改善された方法
JP2009519023A (ja) 2005-12-14 2009-05-14 エフ.ホフマン−ラ ロシュ アーゲー 重亜硫酸処理のための新規方法
WO2014120918A1 (en) 2013-01-30 2014-08-07 Exact Sciences Corporation Treatment of a sample vessel
US20160265033A1 (en) 2012-01-30 2016-09-15 Exact Sciences Corporation Modification of dna on magnetic beads

Family Cites Families (24)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4554088A (en) 1983-05-12 1985-11-19 Advanced Magnetics Inc. Magnetic particles for use in separations
FI932866A0 (fi) 1993-06-21 1993-06-21 Labsystems Oy Separeringsfoerfarande
EP1130397B1 (en) 1993-02-01 2006-10-11 Thermo Electron Oy Equipment for determination of an analyte from a sample
US5648124A (en) 1993-07-09 1997-07-15 Seradyn, Inc. Process for preparing magnetically responsive microparticles
JP3115501B2 (ja) 1994-06-15 2000-12-11 プレシジョン・システム・サイエンス株式会社 分注機を利用した磁性体の脱着制御方法及びこの方法によって処理される各種装置
FI944937A0 (fi) 1994-10-20 1994-10-20 Labsystems Oy Separeringsanordning
US5786146A (en) 1996-06-03 1998-07-28 The Johns Hopkins University School Of Medicine Method of detection of methylated nucleic acid using agents which modify unmethylated cytosine and distinguishing modified methylated and non-methylated nucleic acids
US6027945A (en) 1997-01-21 2000-02-22 Promega Corporation Methods of isolating biological target materials using silica magnetic particles
WO1999040098A1 (de) 1998-02-04 1999-08-12 Merck Patent Gmbh Verfahren zur isolierung und aufreinigung von nucleinsäuren
US6194562B1 (en) 1998-04-22 2001-02-27 Promega Corporation Endotoxin reduction in nucleic acid purification
US7078224B1 (en) 1999-05-14 2006-07-18 Promega Corporation Cell concentration and lysate clearance using paramagnetic particles
US6270970B1 (en) 1999-05-14 2001-08-07 Promega Corporation Mixed-bed solid phase and its use in the isolation of nucleic acids
EP1394172A1 (en) 2002-08-29 2004-03-03 Boehringer Mannheim Gmbh Improved method for bisulfite treatment
EP2016188B1 (en) * 2006-04-24 2015-10-21 Xiyu Jia Methods for detection of methylated dna
US8361720B2 (en) 2010-11-15 2013-01-29 Exact Sciences Corporation Real time cleavage assay
US8916344B2 (en) 2010-11-15 2014-12-23 Exact Sciences Corporation Methylation assay
US8715937B2 (en) 2010-11-15 2014-05-06 Exact Sciences Corporation Mutation detection assay
CN104450680A (zh) 2011-05-12 2015-03-25 精密科学公司 核酸的分离
WO2013181651A1 (en) 2012-06-01 2013-12-05 Omega Bio-Tek, Inc. Selective nucleic acid fragment recovery
US9212392B2 (en) 2012-09-25 2015-12-15 Exact Sciences Corporation Normalization of polymerase activity
CA2965500A1 (en) * 2014-10-24 2016-04-28 Abbott Molecular Inc. Enrichment of small nucleic acids
WO2018017710A1 (en) 2016-07-19 2018-01-25 Exact Sciences Development Company, Llc Nucleic acid control molecules from non-human organisms
US10648025B2 (en) * 2017-12-13 2020-05-12 Exact Sciences Development Company, Llc Multiplex amplification detection assay II
CN109022417A (zh) 2018-08-13 2018-12-18 益善生物技术股份有限公司 一种磁珠法核酸提取转化试剂盒及其使用方法

Patent Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2004089195A (ja) 2002-08-29 2004-03-25 F Hoffmann La Roche Ag 亜硫酸水素塩処理のための改善された方法
JP2009519023A (ja) 2005-12-14 2009-05-14 エフ.ホフマン−ラ ロシュ アーゲー 重亜硫酸処理のための新規方法
US20160265033A1 (en) 2012-01-30 2016-09-15 Exact Sciences Corporation Modification of dna on magnetic beads
WO2014120918A1 (en) 2013-01-30 2014-08-07 Exact Sciences Corporation Treatment of a sample vessel

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
PLoS ONE,2017年,Vol.12, No.5,e0176848 (pp.1-14)

Also Published As

Publication number Publication date
AU2021329235A1 (en) 2023-02-23
KR20230041000A (ko) 2023-03-23
CA3186515A1 (en) 2022-02-24
EP4189086A2 (en) 2023-06-07
WO2022039904A2 (en) 2022-02-24
JP2023536085A (ja) 2023-08-23
US20240026341A1 (en) 2024-01-25
WO2022039904A3 (en) 2022-06-02
EP4189086B1 (en) 2026-03-11
CN116157519A (zh) 2023-05-23
EP4189086A4 (en) 2024-07-17

Similar Documents

Publication Publication Date Title
JP7853277B2 (ja) スルホン化dnaの精製
US20240150814A1 (en) Modification of dna on magnetic beads
JP2025060959A (ja) 配列決定用途および他の核酸物質インテロゲーションのための核酸物質を濃縮するための方法および試薬
US7968327B2 (en) Nucleic acid quantitation from tissue slides
JP5374679B2 (ja) 重亜硫酸処理のための新規方法
EP2505666B1 (en) Methods and compositions for enriching either target polynucleotides or non-target polynucleotides from a mixture of target and non-target polynucleotides
US20040106140A1 (en) Methods of identification and isolation of polynucleotides containing nucleic aicd differences
CN107208135A (zh) 用于进行甲基化检测测定的组合物和方法
JP2004089195A (ja) 亜硫酸水素塩処理のための改善された方法
US10053686B2 (en) Methods for one step nucleic acid amplification of non-eluted samples
CN110129436A (zh) Dna甲基化的数字序列分析
CN105378108A (zh) 用于分离核酸的系统和方法
US9689027B2 (en) High efficiency multiplexed nucleic acid capture in a structured microenvironment
HK40093019B (en) Purification of sulfonated dna
HK40093019A (en) Purification of sulfonated dna
WO2014120918A1 (en) Treatment of a sample vessel
WO2026055641A1 (en) Methods and compositions for preparing biomolecule analytes from complex samples
JP2023103372A (ja) 改良された核酸標的濃縮および関連方法
WO2025137492A1 (en) Method for enriching pathogen dna and implementation thereof

Legal Events

Date Code Title Description
A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20240725

A621 Written request for application examination

Free format text: JAPANESE INTERMEDIATE CODE: A621

Effective date: 20240725

A131 Notification of reasons for refusal

Free format text: JAPANESE INTERMEDIATE CODE: A131

Effective date: 20250624

A977 Report on retrieval

Free format text: JAPANESE INTERMEDIATE CODE: A971007

Effective date: 20250625

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20250924

A131 Notification of reasons for refusal

Free format text: JAPANESE INTERMEDIATE CODE: A131

Effective date: 20251028

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20260122

TRDD Decision of grant or rejection written
A01 Written decision to grant a patent or to grant a registration (utility model)

Free format text: JAPANESE INTERMEDIATE CODE: A01

Effective date: 20260317

A61 First payment of annual fees (during grant procedure)

Free format text: JAPANESE INTERMEDIATE CODE: A61

Effective date: 20260416