JP6096672B2 - 検出体、プローブ、および阻害剤を用いた核酸標的検出 - Google Patents

検出体、プローブ、および阻害剤を用いた核酸標的検出 Download PDF

Info

Publication number
JP6096672B2
JP6096672B2 JP2013543299A JP2013543299A JP6096672B2 JP 6096672 B2 JP6096672 B2 JP 6096672B2 JP 2013543299 A JP2013543299 A JP 2013543299A JP 2013543299 A JP2013543299 A JP 2013543299A JP 6096672 B2 JP6096672 B2 JP 6096672B2
Authority
JP
Japan
Prior art keywords
nucleic acid
inhibitor
target nucleic
fluorophore
detector
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Expired - Fee Related
Application number
JP2013543299A
Other languages
English (en)
Japanese (ja)
Other versions
JP2014500729A5 (OSRAM
JP2014500729A (ja
Inventor
ラズ,タル
メアリー,パスカリーヌ
Original Assignee
ヌビオ,インコーポレイテッド
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by ヌビオ,インコーポレイテッド filed Critical ヌビオ,インコーポレイテッド
Publication of JP2014500729A publication Critical patent/JP2014500729A/ja
Publication of JP2014500729A5 publication Critical patent/JP2014500729A5/ja
Application granted granted Critical
Publication of JP6096672B2 publication Critical patent/JP6096672B2/ja
Expired - Fee Related legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Images

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6816Hybridisation assays characterised by the detection means
    • C12Q1/6818Hybridisation assays characterised by the detection means involving interaction of two or more labels, e.g. resonant energy transfer
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6804Nucleic acid analysis using immunogens
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/6858Allele-specific amplification
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64Fluorescence; Phosphorescence
    • G01N21/6428Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes"
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64Fluorescence; Phosphorescence
    • G01N21/6486Measuring fluorescence of biological material, e.g. DNA, RNA, cells
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64Fluorescence; Phosphorescence
    • G01N21/6428Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes"
    • G01N2021/6439Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes" with indicators, stains, dyes, tags, labels, marks

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Immunology (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • Biotechnology (AREA)
  • Genetics & Genomics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • Biophysics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Pathology (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
  • General Physics & Mathematics (AREA)
  • Biomedical Technology (AREA)
  • Optics & Photonics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Dispersion Chemistry (AREA)
JP2013543299A 2010-12-07 2011-12-07 検出体、プローブ、および阻害剤を用いた核酸標的検出 Expired - Fee Related JP6096672B2 (ja)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US42074710P 2010-12-07 2010-12-07
US61/420,747 2010-12-07
PCT/US2011/063654 WO2012078710A1 (en) 2010-12-07 2011-12-07 Nucleic acid target detection using a detector, a probe and an inhibitor

Publications (3)

Publication Number Publication Date
JP2014500729A JP2014500729A (ja) 2014-01-16
JP2014500729A5 JP2014500729A5 (OSRAM) 2015-01-29
JP6096672B2 true JP6096672B2 (ja) 2017-03-15

Family

ID=46207491

Family Applications (1)

Application Number Title Priority Date Filing Date
JP2013543299A Expired - Fee Related JP6096672B2 (ja) 2010-12-07 2011-12-07 検出体、プローブ、および阻害剤を用いた核酸標的検出

Country Status (8)

Country Link
US (2) US9581549B2 (OSRAM)
EP (1) EP2649202B1 (OSRAM)
JP (1) JP6096672B2 (OSRAM)
CN (2) CN105603071B (OSRAM)
AU (1) AU2011338502B2 (OSRAM)
CA (1) CA2820094C (OSRAM)
SG (1) SG191725A1 (OSRAM)
WO (1) WO2012078710A1 (OSRAM)

Families Citing this family (15)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN105603071B (zh) * 2010-12-07 2019-06-21 伯乐实验有限公司 使用检测剂、探针和抑制剂检测核酸靶标
WO2012135259A1 (en) 2011-03-30 2012-10-04 Gnubio, Inc. Injection of multiple volumes into or out of droplets
EP3056573B1 (en) 2011-03-31 2018-09-26 Bio-Rad Laboratories, Inc. Managing variation in spectroscopic intensity measurements through the use of a reference component
JP5986623B2 (ja) 2011-03-31 2016-09-06 ヌビオ,インコーポレイテッド スケーラブルなスペクトル検出および計測
WO2014043388A1 (en) 2012-09-12 2014-03-20 Gnubio, Inc. Integrated microfluidic system, method and kit for performing assays
US9592503B2 (en) 2013-01-25 2017-03-14 Gnubio, Inc. System and method for performing droplet inflation
CN105408495B (zh) 2013-04-26 2019-01-08 基纽拜奥股份有限公司 通过茎环结构阻断3’dna末端的聚合酶延伸的方法
EP3004391B1 (en) 2013-05-29 2019-03-27 Bio-Rad Laboratories, Inc. Methods for sequencing in emulsion based microfluidics
CN105393094B (zh) 2013-05-29 2019-07-23 生物辐射实验室股份有限公司 低成本光学高速离散测量系统
CN105765055A (zh) 2013-08-27 2016-07-13 基纽拜奥股份有限公司 微流体装置和其使用方法
CN105636697B (zh) 2013-09-30 2018-06-12 基纽拜奥股份有限公司 微流体盒装置和使用方法以及组件
US10130950B2 (en) 2013-11-27 2018-11-20 Bio-Rad Laboratories, Inc. Microfluidic droplet packing
WO2016004022A2 (en) 2014-06-30 2016-01-07 Gnubio, Inc. Floating thermal contact enabled pcr
WO2018140856A1 (en) 2017-01-30 2018-08-02 Bio-Rad Laboratories, Inc. Emulsion compositions and methods of their use
CN110446787A (zh) 2017-03-24 2019-11-12 生物辐射实验室股份有限公司 通用发夹引物

Family Cites Families (40)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5538848A (en) * 1994-11-16 1996-07-23 Applied Biosystems Division, Perkin-Elmer Corp. Method for detecting nucleic acid amplification using self-quenching fluorescence probe
US6007994A (en) * 1995-12-22 1999-12-28 Yale University Multiparametric fluorescence in situ hybridization
US6235502B1 (en) * 1998-09-18 2001-05-22 Molecular Staging Inc. Methods for selectively isolating DNA using rolling circle amplification
US20030148303A1 (en) * 2000-09-19 2003-08-07 Nadeau James G. Universal probes and methods for detection of nucleic acids
CA2451614C (en) * 2001-06-25 2011-01-04 Georgia Tech Research Corporation Dual resonance energy transfer nucleic acid probes
EP2662136A3 (en) 2003-08-27 2013-12-25 President and Fellows of Harvard College Method for handling and mixing droplets
EP1984738A2 (en) 2006-01-11 2008-10-29 Raindance Technologies, Inc. Microfluidic devices and methods of use in the formation and control of nanoreactors
WO2007133710A2 (en) 2006-05-11 2007-11-22 Raindance Technologies, Inc. Microfluidic devices and methods of use thereof
WO2008021446A2 (en) * 2006-08-15 2008-02-21 Genetag Technology, Inc. Probe-antiprobe compositions and methods for dna or rna detection
US8568979B2 (en) * 2006-10-10 2013-10-29 Illumina, Inc. Compositions and methods for representational selection of nucleic acids from complex mixtures using hybridization
US20100129792A1 (en) * 2007-02-06 2010-05-27 Gerassimos Makrigiorgos Direct monitoring and pcr amplification of the dosage and dosage difference between target genetic regions
EP2152871A4 (en) * 2007-05-31 2011-01-05 Becton Dickinson Co SEQUENCES AND METHOD FOR DETECTING INFLUENZA VIRUS A AND INFLUENZA VIRUS B
CN101946010B (zh) 2007-12-21 2014-08-20 哈佛大学 用于核酸测序的系统和方法
US9358539B2 (en) 2008-05-16 2016-06-07 President And Fellows Of Harvard College Valves and other flow control in fluidic systems including microfluidic systems
US20110218123A1 (en) 2008-09-19 2011-09-08 President And Fellows Of Harvard College Creation of libraries of droplets and related species
EP3290531B1 (en) 2008-12-19 2019-07-24 President and Fellows of Harvard College Particle-assisted nucleic acid sequencing
US8528589B2 (en) 2009-03-23 2013-09-10 Raindance Technologies, Inc. Manipulation of microfluidic droplets
JP5687414B2 (ja) * 2009-04-20 2015-03-18 オリンパス株式会社 多型の識別方法
CN102483424B (zh) 2009-06-26 2014-11-05 哈佛学院院长等 用于流体操作的方法以及微流体装置
CA2778816C (en) 2009-10-27 2018-07-31 President And Fellows Of Harvard College Droplet creation techniques
EP4484577A3 (en) 2010-02-12 2025-03-26 Bio-Rad Laboratories, Inc. Digital analyte analysis
CN105603071B (zh) 2010-12-07 2019-06-21 伯乐实验有限公司 使用检测剂、探针和抑制剂检测核酸靶标
WO2012109600A2 (en) 2011-02-11 2012-08-16 Raindance Technologies, Inc. Methods for forming mixed droplets
US9150852B2 (en) 2011-02-18 2015-10-06 Raindance Technologies, Inc. Compositions and methods for molecular labeling
WO2012135259A1 (en) 2011-03-30 2012-10-04 Gnubio, Inc. Injection of multiple volumes into or out of droplets
EP3056573B1 (en) 2011-03-31 2018-09-26 Bio-Rad Laboratories, Inc. Managing variation in spectroscopic intensity measurements through the use of a reference component
JP5986623B2 (ja) 2011-03-31 2016-09-06 ヌビオ,インコーポレイテッド スケーラブルなスペクトル検出および計測
US8841071B2 (en) 2011-06-02 2014-09-23 Raindance Technologies, Inc. Sample multiplexing
CN103958050B (zh) 2011-09-28 2016-09-14 哈佛学院院长等 用于液滴产生和/或流体操纵的系统和方法
US20150045258A1 (en) 2012-02-14 2015-02-12 Gnubio, Inc. Cascaded addition of target specific universal adapters to nucleic acids
WO2013165748A1 (en) 2012-04-30 2013-11-07 Raindance Technologies, Inc Digital analyte analysis
WO2014043388A1 (en) 2012-09-12 2014-03-20 Gnubio, Inc. Integrated microfluidic system, method and kit for performing assays
EP2931259A4 (en) 2012-12-14 2016-07-13 Gnubio Inc METHOD FOR MAINTAINING HETEROGENIC CONCENTRATION OF MOLECULES IN EMULSION STUFFS
US9592503B2 (en) 2013-01-25 2017-03-14 Gnubio, Inc. System and method for performing droplet inflation
CN105408495B (zh) 2013-04-26 2019-01-08 基纽拜奥股份有限公司 通过茎环结构阻断3’dna末端的聚合酶延伸的方法
CN105393094B (zh) 2013-05-29 2019-07-23 生物辐射实验室股份有限公司 低成本光学高速离散测量系统
EP3004391B1 (en) 2013-05-29 2019-03-27 Bio-Rad Laboratories, Inc. Methods for sequencing in emulsion based microfluidics
CN105765055A (zh) 2013-08-27 2016-07-13 基纽拜奥股份有限公司 微流体装置和其使用方法
CN105636697B (zh) 2013-09-30 2018-06-12 基纽拜奥股份有限公司 微流体盒装置和使用方法以及组件
WO2016004022A2 (en) 2014-06-30 2016-01-07 Gnubio, Inc. Floating thermal contact enabled pcr

Also Published As

Publication number Publication date
CN103348017A (zh) 2013-10-09
AU2011338502B2 (en) 2016-08-11
EP2649202A4 (en) 2015-05-27
EP2649202A1 (en) 2013-10-16
US9581549B2 (en) 2017-02-28
CN103348017B (zh) 2016-01-20
CA2820094C (en) 2019-02-26
EP2649202B1 (en) 2019-02-20
CN105603071A (zh) 2016-05-25
US10533212B2 (en) 2020-01-14
JP2014500729A (ja) 2014-01-16
US20130344485A1 (en) 2013-12-26
CA2820094A1 (en) 2012-06-14
AU2011338502A1 (en) 2013-06-13
SG191725A1 (en) 2013-08-30
WO2012078710A1 (en) 2012-06-14
CN105603071B (zh) 2019-06-21
US20170226568A1 (en) 2017-08-10

Similar Documents

Publication Publication Date Title
JP6096672B2 (ja) 検出体、プローブ、および阻害剤を用いた核酸標的検出
US11884965B2 (en) Chimeric primers with hairpin conformations and methods of using same
JP5385973B2 (ja) 反応における複数の核酸配列の同時検出
SK12212000A3 (sk) Metóda na detekciu cieľovej nukleovej kyseliny pomocou PCR
EP2971147A1 (en) Multiplex allele detection
Overbergh et al. Quantitative Polymerase Chain Reaction
WO2007055255A1 (ja) 複数の識別用核酸配列を増幅する方法
US20110136105A1 (en) Methods of quantifying nucleic acids
HK1174946A (en) Chimeric primers with hairpin conformations and methods of using same
HK1174946B (zh) 具有发夹构象的嵌合引物及其使用方法

Legal Events

Date Code Title Description
A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20141203

A621 Written request for application examination

Free format text: JAPANESE INTERMEDIATE CODE: A621

Effective date: 20141203

A131 Notification of reasons for refusal

Free format text: JAPANESE INTERMEDIATE CODE: A131

Effective date: 20151222

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20160318

A131 Notification of reasons for refusal

Free format text: JAPANESE INTERMEDIATE CODE: A131

Effective date: 20160830

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20161128

TRDD Decision of grant or rejection written
A01 Written decision to grant a patent or to grant a registration (utility model)

Free format text: JAPANESE INTERMEDIATE CODE: A01

Effective date: 20170207

A61 First payment of annual fees (during grant procedure)

Free format text: JAPANESE INTERMEDIATE CODE: A61

Effective date: 20170216

R150 Certificate of patent or registration of utility model

Ref document number: 6096672

Country of ref document: JP

Free format text: JAPANESE INTERMEDIATE CODE: R150

S111 Request for change of ownership or part of ownership

Free format text: JAPANESE INTERMEDIATE CODE: R313113

R350 Written notification of registration of transfer

Free format text: JAPANESE INTERMEDIATE CODE: R350

R250 Receipt of annual fees

Free format text: JAPANESE INTERMEDIATE CODE: R250

R250 Receipt of annual fees

Free format text: JAPANESE INTERMEDIATE CODE: R250

R250 Receipt of annual fees

Free format text: JAPANESE INTERMEDIATE CODE: R250

R250 Receipt of annual fees

Free format text: JAPANESE INTERMEDIATE CODE: R250

LAPS Cancellation because of no payment of annual fees