JP6009724B2 - ダブルシグモイドの曲率解析のためのクアドランティック検定を用いたpcrエルボーの決定 - Google Patents
ダブルシグモイドの曲率解析のためのクアドランティック検定を用いたpcrエルボーの決定 Download PDFInfo
- Publication number
- JP6009724B2 JP6009724B2 JP2008242813A JP2008242813A JP6009724B2 JP 6009724 B2 JP6009724 B2 JP 6009724B2 JP 2008242813 A JP2008242813 A JP 2008242813A JP 2008242813 A JP2008242813 A JP 2008242813A JP 6009724 B2 JP6009724 B2 JP 6009724B2
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- G—PHYSICS
- G06—COMPUTING OR CALCULATING; COUNTING
- G06F—ELECTRIC DIGITAL DATA PROCESSING
- G06F17/00—Digital computing or data processing equipment or methods, specially adapted for specific functions
- G06F17/10—Complex mathematical operations
- G06F17/18—Complex mathematical operations for evaluating statistical data, e.g. average values, frequency distributions, probability functions, regression analysis
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/686—Polymerase chain reaction [PCR]
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- Engineering & Computer Science (AREA)
- Chemical & Material Sciences (AREA)
- Physics & Mathematics (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- General Physics & Mathematics (AREA)
- Data Mining & Analysis (AREA)
- Computational Mathematics (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Mathematical Analysis (AREA)
- Mathematical Optimization (AREA)
- Wood Science & Technology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Pure & Applied Mathematics (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Mathematical Physics (AREA)
- Health & Medical Sciences (AREA)
- Zoology (AREA)
- General Engineering & Computer Science (AREA)
- Theoretical Computer Science (AREA)
- Databases & Information Systems (AREA)
- Molecular Biology (AREA)
- Software Systems (AREA)
- Evolutionary Biology (AREA)
- Algebra (AREA)
- Biophysics (AREA)
- Biotechnology (AREA)
- Immunology (AREA)
- Microbiology (AREA)
- Bioinformatics & Computational Biology (AREA)
- Probability & Statistics with Applications (AREA)
- Operations Research (AREA)
- Analytical Chemistry (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Management, Administration, Business Operations System, And Electronic Commerce (AREA)
- Apparatus Associated With Microorganisms And Enzymes (AREA)
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Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US11/861,188 US20090119020A1 (en) | 2007-09-25 | 2007-09-25 | Pcr elbow determination using quadratic test for curvature analysis of a double sigmoid |
| US11/861,188 | 2007-09-25 |
Publications (3)
| Publication Number | Publication Date |
|---|---|
| JP2009080811A JP2009080811A (ja) | 2009-04-16 |
| JP2009080811A5 JP2009080811A5 (enExample) | 2011-10-13 |
| JP6009724B2 true JP6009724B2 (ja) | 2016-10-19 |
Family
ID=40475156
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2008242813A Active JP6009724B2 (ja) | 2007-09-25 | 2008-09-22 | ダブルシグモイドの曲率解析のためのクアドランティック検定を用いたpcrエルボーの決定 |
Country Status (5)
| Country | Link |
|---|---|
| US (1) | US20090119020A1 (enExample) |
| EP (1) | EP2107470B1 (enExample) |
| JP (1) | JP6009724B2 (enExample) |
| CN (1) | CN101526476B (enExample) |
| CA (1) | CA2639714A1 (enExample) |
Families Citing this family (22)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US8374795B2 (en) | 2008-05-13 | 2013-02-12 | Roche Molecular Systems, Inc. | Systems and methods for step discontinuity removal in real-time PCR fluorescence data |
| US8219366B2 (en) * | 2009-08-26 | 2012-07-10 | Roche Molecular Sytems, Inc. | Determination of elbow values for PCR for parabolic shaped curves |
| US11072821B2 (en) | 2009-09-12 | 2021-07-27 | Azure Vault Ltd. | Identifying transition points in chemical reactions |
| CA2817220C (en) | 2009-11-22 | 2015-10-20 | Azure Vault Ltd. | Automatic chemical assay classification |
| US8666673B2 (en) | 2010-05-14 | 2014-03-04 | Biomerieux, Inc | Identification and/or characterization of a microbial agent using taxonomic hierarchical classification |
| US9988675B2 (en) | 2011-03-15 | 2018-06-05 | Azure Vault Ltd. | Rate based identification of reaction points |
| US8738303B2 (en) * | 2011-05-02 | 2014-05-27 | Azure Vault Ltd. | Identifying outliers among chemical assays |
| US8660968B2 (en) | 2011-05-25 | 2014-02-25 | Azure Vault Ltd. | Remote chemical assay classification |
| US20130096845A1 (en) | 2011-10-14 | 2013-04-18 | Ze'ev Russak | Cumulative differential chemical assay identification |
| US10475527B2 (en) | 2012-03-22 | 2019-11-12 | Biomerieux, Inc. | Method and system for detection of microbial growth in a specimen container |
| US10176293B2 (en) * | 2012-10-02 | 2019-01-08 | Roche Molecular Systems, Inc. | Universal method to determine real-time PCR cycle threshold values |
| US9607128B2 (en) | 2013-12-30 | 2017-03-28 | Roche Molecular Systems, Inc. | Detection and correction of jumps in real-time PCR signals |
| US10519759B2 (en) | 2014-04-24 | 2019-12-31 | Conocophillips Company | Growth functions for modeling oil production |
| JP7493300B2 (ja) * | 2017-06-27 | 2024-05-31 | 東洋紡株式会社 | 解析用プログラムおよび解析装置 |
| AU2018339207A1 (en) | 2017-09-28 | 2020-04-16 | Seegene, Inc. . | Method and device for analyzing target analyte in sample |
| DE102020202363A1 (de) * | 2020-02-25 | 2021-08-26 | Robert Bosch Gesellschaft mit beschränkter Haftung | Verfahren und Vorrichtung zur Durchführung eines qPCR-Verfahrens |
| CN115312123A (zh) * | 2021-05-07 | 2022-11-08 | 台达电子工业股份有限公司 | 数据预筛方法及其数据预筛装置 |
| EP4421814A4 (en) | 2021-10-21 | 2025-11-12 | Seegene Inc | APPROVAL AND METHOD FOR READING A POSITIVE/NEGATIVE RESULT WITH RESPECT TO A TARGET TEST SUBSTANCE IN A SAMPLE |
| CN114339768B (zh) * | 2021-12-24 | 2024-11-22 | 观源(上海)科技有限公司 | 一种usim卡抗侧信道攻击能力评估方法及其系统 |
| US20250336479A1 (en) | 2022-07-29 | 2025-10-30 | Seegene, Inc | Apparatus and method for providing interface for setting threshold value of parameter |
| WO2024128878A1 (ko) | 2022-12-15 | 2024-06-20 | 주식회사 씨젠 | 형광 데이터의 분석 알고리즘에 대한 성능 비교 결과를 디스플레이하는 장치 및 방법 |
| CN116473512B (zh) * | 2023-03-22 | 2024-05-03 | 上海交通大学 | 一种动物循环系统中外泌体的监测装置及监测方法 |
Family Cites Families (12)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| DE69739357D1 (de) | 1996-06-04 | 2009-05-28 | Univ Utah Res Found | Überwachung der hybridisierung während pcr |
| ES2215230T3 (es) | 1996-06-04 | 2004-10-01 | University Of Utah Research Foundation | Sistema y metodo para llevar a cabo y supervisar reacciones de cadena de polimerasa. |
| US7228237B2 (en) * | 2002-02-07 | 2007-06-05 | Applera Corporation | Automatic threshold setting and baseline determination for real-time PCR |
| ES2301754T3 (es) * | 2002-02-12 | 2008-07-01 | University Of Utah Research Foundation | Analisis de pruebas multiples de amplificaciones de acidos nucleicos en tiempo real. |
| US20060009916A1 (en) * | 2004-07-06 | 2006-01-12 | Xitong Li | Quantitative PCR data analysis system (QDAS) |
| JP5091122B2 (ja) * | 2005-05-13 | 2012-12-05 | バイオ−ラッド ラボラトリーズ,インコーポレイティド | 統計的線形データの同定 |
| EP3168766B1 (en) * | 2005-09-20 | 2023-08-16 | University of Utah Research Foundation | Genotyping method for a plurality of samples |
| EP1798650A1 (en) * | 2005-12-19 | 2007-06-20 | Roche Diagnostics GmbH | Analytical method and instrument |
| US7680868B2 (en) * | 2005-12-20 | 2010-03-16 | Roche Molecular Systems, Inc. | PCR elbow determination by use of a double sigmoid function curve fit with the Levenburg-Marquardt algorithm and normalization |
| US7844403B2 (en) * | 2005-12-20 | 2010-11-30 | Roche Molecular Systems, Inc. | Temperature step correction with double sigmoid Levenberg-Marquardt and robust linear regression |
| US7668663B2 (en) * | 2005-12-20 | 2010-02-23 | Roche Molecular Systems, Inc. | Levenberg-Marquardt outlier spike removal method |
| EP1804172B1 (en) * | 2005-12-20 | 2021-08-11 | Roche Diagnostics GmbH | PCR elbow determination using curvature analysis of a double sigmoid |
-
2007
- 2007-09-25 US US11/861,188 patent/US20090119020A1/en not_active Abandoned
-
2008
- 2008-09-22 CA CA002639714A patent/CA2639714A1/en not_active Abandoned
- 2008-09-22 JP JP2008242813A patent/JP6009724B2/ja active Active
- 2008-09-24 EP EP08016729.9A patent/EP2107470B1/en active Active
- 2008-09-25 CN CN2008101497410A patent/CN101526476B/zh active Active
Also Published As
| Publication number | Publication date |
|---|---|
| HK1133697A1 (en) | 2010-04-01 |
| US20090119020A1 (en) | 2009-05-07 |
| EP2107470A2 (en) | 2009-10-07 |
| CA2639714A1 (en) | 2009-03-25 |
| JP2009080811A (ja) | 2009-04-16 |
| EP2107470A3 (en) | 2017-09-06 |
| CN101526476B (zh) | 2013-11-13 |
| CN101526476A (zh) | 2009-09-09 |
| EP2107470B1 (en) | 2023-08-30 |
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