JP5106412B2 - 合成ゲノム - Google Patents

合成ゲノム Download PDF

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JP5106412B2
JP5106412B2 JP2008544524A JP2008544524A JP5106412B2 JP 5106412 B2 JP5106412 B2 JP 5106412B2 JP 2008544524 A JP2008544524 A JP 2008544524A JP 2008544524 A JP2008544524 A JP 2008544524A JP 5106412 B2 JP5106412 B2 JP 5106412B2
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genome
synthetic
cassette
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JP2009518038A5 (enExample
JP2009518038A (ja
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ベンター、ジェイ．クレイグ
オー． スミス、ハミルトン
Ｉｉｉ、クライド エー． ハッチソン
ジー． ギブソン、ダニエル
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シンセティック ゲノミクス、インク．
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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034—Isolating an individual clone by screening libraries
    • C12N15/1093—General methods of preparing gene libraries, not provided for in other subgroups
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/66—General methods for inserting a gene into a vector to form a recombinant vector using cleavage and ligation; Use of non-functional linkers or adaptors, e.g. linkers containing the sequence for a restriction endonuclease

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  • Genetics & Genomics (AREA)
  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Wood Science & Technology (AREA)
  • Biomedical Technology (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • Plant Pathology (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
JP2008544524A 2005-12-06 2006-12-06 合成ゲノム Active JP5106412B2 (ja)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US74254205P 2005-12-06 2005-12-06
US60/742,542 2005-12-06
PCT/US2006/046803 WO2008024129A2 (en) 2005-12-06 2006-12-06 Synthetic genomes

Publications (3)

Publication Number Publication Date
JP2009518038A JP2009518038A (ja) 2009-05-07
JP2009518038A5 JP2009518038A5 (enExample) 2010-01-28
JP5106412B2 true JP5106412B2 (ja) 2012-12-26

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ID=39107256

Family Applications (1)

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JP2008544524A Active JP5106412B2 (ja) 2005-12-06 2006-12-06 合成ゲノム

Country Status (9)

Country Link
US (2) US10041060B2 (enExample)
EP (1) EP1968994B1 (enExample)
JP (1) JP5106412B2 (enExample)
CN (1) CN101501207B (enExample)
AU (1) AU2006347573B2 (enExample)
CA (1) CA2643356A1 (enExample)
DK (1) DK1968994T3 (enExample)
IL (1) IL192041A (enExample)
WO (1) WO2008024129A2 (enExample)

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WO2010102257A2 (en) * 2009-03-06 2010-09-10 Synthetic Genomics, Inc. Methods for cloning and manipulating genomes
US9267132B2 (en) 2007-10-08 2016-02-23 Synthetic Genomics, Inc. Methods for cloning and manipulating genomes
DK2255013T3 (en) * 2008-02-15 2016-09-12 Synthetic Genomics Inc Methods for in vitro joining and combinatorial assembly of nucleic acid molecules.
US10093552B2 (en) 2008-02-22 2018-10-09 James Weifu Lee Photovoltaic panel-interfaced solar-greenhouse distillation systems
US9259662B2 (en) 2008-02-22 2016-02-16 James Weifu Lee Photovoltaic panel-interfaced solar-greenhouse distillation systems
AU2009217293B2 (en) * 2008-02-23 2014-11-20 James Weifu Lee Designer organisms for photobiological butanol production from carbon dioxide and water
US8986963B2 (en) * 2008-02-23 2015-03-24 James Weifu Lee Designer calvin-cycle-channeled production of butanol and related higher alcohols
CN102015995B (zh) 2008-03-03 2014-10-22 焦耳无限科技公司 产生碳基目的产物的二氧化碳固定工程微生物
EP2998402A1 (en) 2008-10-17 2016-03-23 Joule Unlimited Technologies, Inc. Ethanol production by microorganisms
EP3257942B1 (en) 2008-12-18 2020-07-22 ITI Scotland Limited Method for assembly of polynucleic acid sequences
US7794969B1 (en) 2009-07-09 2010-09-14 Joule Unlimited, Inc. Methods and compositions for the recombinant biosynthesis of n-alkanes
US20120077251A1 (en) 2010-09-14 2012-03-29 C/O Joule Unlimited Technologies, Inc. Methods and Compositions for Targeting Heterologous Integral Membrane Proteins to the Cyanobacterial Plasma Membrane
WO2011038134A1 (en) 2009-09-25 2011-03-31 Ls9, Inc. Production of fatty acid derivatives
US20110269119A1 (en) 2009-10-30 2011-11-03 Synthetic Genomics, Inc. Encoding text into nucleic acid sequences
MX2012005069A (es) * 2009-10-30 2012-07-17 Synthetic Genomics Inc Codificar texto hacia secuencias de acido nucleico.
CN102939380A (zh) * 2010-03-05 2013-02-20 合成基因组股份有限公司 用于克隆和操作基因组的方法
GB2481425A (en) 2010-06-23 2011-12-28 Iti Scotland Ltd Method and device for assembling polynucleic acid sequences
US8349587B2 (en) 2011-10-31 2013-01-08 Ginkgo Bioworks, Inc. Methods and systems for chemoautotrophic production of organic compounds
US8790901B2 (en) 2011-12-14 2014-07-29 Pronutria, Inc. Microorganisms and methods for producing unsaturated fatty acids
HK1206765A1 (en) 2012-03-26 2016-01-15 Axcella Health Inc. Nutritive fragments, proteins and methods
SG10201604464SA (en) 2012-03-26 2016-07-28 Axcella Health Inc Charged nutritive proteins and methods
HK1206764A1 (en) 2012-03-26 2016-01-15 Axcella Health Inc. Nutritive proteins and methods
EP2831102A4 (en) 2012-03-26 2015-12-02 Pronutria Inc NUTRITIONAL FRAGMENTS, PROTEINS THEREFOR AND METHOD
GB201219989D0 (en) 2012-11-06 2012-12-19 Discuva Ltd Bacterial engineering
WO2014089436A1 (en) 2012-12-07 2014-06-12 Ginkgo Bioworks, Inc. Methods and systems for methylotrophic production of organic compounds
US11408013B2 (en) 2013-07-19 2022-08-09 Cargill, Incorporated Microorganisms and methods for the production of fatty acids and fatty acid derived products
WO2015048334A2 (en) 2013-09-25 2015-04-02 Pronutria, Inc. Edible species nutritive polypeptides and methods of production and use thereof
WO2015048339A2 (en) 2013-09-25 2015-04-02 Pronutria, Inc. Compositions and formulations for non-human nutrition and methods of production and use thereof
WO2015054507A1 (en) 2013-10-10 2015-04-16 Pronutria, Inc. Nutritive polypeptide production systems, and methods of manufacture and use thereof
GB201413202D0 (en) 2014-07-25 2014-09-10 Discuva Ltd Process for producing bacterial mutants
EP3430133A1 (en) 2016-03-17 2019-01-23 INVISTA Textiles (U.K.) Limited Carboxylic acid reductase polypeptides and variants having improved activity, materials and processes relating thereto
US11085037B2 (en) * 2016-03-23 2021-08-10 Codex Dna, Inc. Generation of synthetic genomes
CN110494566A (zh) 2017-02-02 2019-11-22 嘉吉公司 产生c6-c10脂肪酸衍生物的经遗传修饰的细胞
EP3775182A1 (en) 2018-03-30 2021-02-17 INVISTA Textiles (U.K.) Limited Materials and methods for biosynthetic manufacture of pimelic acid and utilization of synthetic polypeptides
EP3775242A1 (en) 2018-03-30 2021-02-17 INVISTA Textiles (U.K.) Limited High hydrogen utilization and gas recycle
EP3775240A1 (en) 2018-03-30 2021-02-17 INVISTA Textiles (U.K.) Limited Method for controlling dissolved oxygen concentration in a continuous aerobic fermentation
US11512276B2 (en) 2018-03-30 2022-11-29 Inv Nylon Chemicals Americas, Llc Methods for controlling oxygen concentration during aerobic biosynthesis
WO2019213033A1 (en) 2018-05-02 2019-11-07 Invista North America S.A.R.L. Materials and methods for maximizing biosynthesis through alteration of pyruvate-acetyl-coa-tca balance in species of the genera ralstonia and cupriavidus and organisms related thereto
EP3788156A1 (en) 2018-05-02 2021-03-10 INVISTA Textiles (U.K.) Limited Methods for controlling limitation conditions in product biosynthesis for non-phb generating cupriavidus or ralstonia

Family Cites Families (19)

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US5750380A (en) 1981-06-30 1998-05-12 City Of Hope Research Institute DNA polymerase mediated synthesis of double stranded nucleic acids
US5928905A (en) 1995-04-18 1999-07-27 Glaxo Group Limited End-complementary polymerase reaction
US5976846A (en) 1996-01-13 1999-11-02 Passmore; Steven E. Method for multifragment in vivo cloning and mutation mapping
IL120338A0 (en) * 1997-02-27 1997-06-10 Gesher Israel Advanced Biotecs Single step DNA fragments assembly
US6670127B2 (en) * 1997-09-16 2003-12-30 Egea Biosciences, Inc. Method for assembly of a polynucleotide encoding a target polypeptide
DE69841578D1 (de) * 1997-09-16 2010-05-06 Centocor Inc Methoden zur kompletten chemischen Synthese und Zusammensetzung von Genen und Genomen
JP3131633B1 (ja) 1999-11-26 2001-02-05 農林水産省食品総合研究所長 Ｐｃｒ法による植物遺伝子の検出方法
CN1384203A (zh) 2001-04-30 2002-12-11 香港科技创业股份有限公司 具有高度延伸专一性的dna低温循环延伸反应方法
US7267984B2 (en) * 2002-10-31 2007-09-11 Rice University Recombination assembly of large DNA fragments
US20040185449A1 (en) 2003-03-20 2004-09-23 Quinn John J. Method for preparing assay samples
EP1629097A1 (en) * 2003-05-22 2006-03-01 University of California Method for producing a synthetic gene or other dna sequence
KR100624452B1 (ko) 2004-12-21 2006-09-18 삼성전자주식회사 고정화된 히드로겔 또는 ｐｅｇ－히드로겔 공중합체를이용한 핵산의 분리 및 정제 방법
DK1915446T3 (en) 2005-08-11 2017-09-11 Synthetic Genomics Inc IN VITRO RECOMBINATION PROCEDURE
DK1929012T3 (da) 2005-08-11 2011-01-31 Synthetic Genomics Inc Fremgangsmåde til in vitro-rekombination
US20090305233A1 (en) 2007-07-03 2009-12-10 Arizona Board Of Regents, A Body Corporate Of The State Of Arizona Methods and Reagents for Polynucleotide Assembly
DK2255013T3 (en) 2008-02-15 2016-09-12 Synthetic Genomics Inc Methods for in vitro joining and combinatorial assembly of nucleic acid molecules.
WO2010042007A1 (en) 2008-10-10 2010-04-15 Jonas Tegenfeldt Method for the mapping of the local at/gc ratio along dna
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Also Published As

Publication number Publication date
EP1968994B1 (en) 2013-07-03
EP1968994A2 (en) 2008-09-17
IL192041A0 (en) 2008-12-29
CN101501207B (zh) 2014-03-12
WO2008024129A2 (en) 2008-02-28
US20070264688A1 (en) 2007-11-15
US10041060B2 (en) 2018-08-07
US20180340165A1 (en) 2018-11-29
JP2009518038A (ja) 2009-05-07
DK1968994T3 (da) 2013-09-30
CN101501207A (zh) 2009-08-05
CA2643356A1 (en) 2008-02-28
AU2006347573B2 (en) 2013-01-17
EP1968994A4 (en) 2009-04-08
WO2008024129A3 (en) 2008-10-09
AU2006347573A1 (en) 2008-02-28
IL192041A (en) 2013-08-29

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