JP2017511156A5 - - Google Patents

Download PDF

Info

Publication number
JP2017511156A5
JP2017511156A5 JP2017505733A JP2017505733A JP2017511156A5 JP 2017511156 A5 JP2017511156 A5 JP 2017511156A5 JP 2017505733 A JP2017505733 A JP 2017505733A JP 2017505733 A JP2017505733 A JP 2017505733A JP 2017511156 A5 JP2017511156 A5 JP 2017511156A5
Authority
JP
Japan
Prior art keywords
imr
pam
protospacer
crispr
bacterium
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Granted
Application number
JP2017505733A
Other languages
English (en)
Japanese (ja)
Other versions
JP2017511156A (ja
JP6621465B2 (ja
Filing date
Publication date
Priority claimed from GBGB1406970.2A external-priority patent/GB201406970D0/en
Application filed filed Critical
Publication of JP2017511156A publication Critical patent/JP2017511156A/ja
Publication of JP2017511156A5 publication Critical patent/JP2017511156A5/ja
Application granted granted Critical
Publication of JP6621465B2 publication Critical patent/JP6621465B2/ja
Expired - Fee Related legal-status Critical Current
Anticipated expiration legal-status Critical

Links

JP2017505733A 2014-04-17 2015-04-16 標的化変異 Expired - Fee Related JP6621465B2 (ja)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
GB1406970.2 2014-04-17
GBGB1406970.2A GB201406970D0 (en) 2014-04-17 2014-04-17 Targeted mutations
PCT/GB2015/051153 WO2015159087A1 (en) 2014-04-17 2015-04-16 Targeted mutations

Publications (3)

Publication Number Publication Date
JP2017511156A JP2017511156A (ja) 2017-04-20
JP2017511156A5 true JP2017511156A5 (enExample) 2018-05-31
JP6621465B2 JP6621465B2 (ja) 2019-12-18

Family

ID=50928941

Family Applications (1)

Application Number Title Priority Date Filing Date
JP2017505733A Expired - Fee Related JP6621465B2 (ja) 2014-04-17 2015-04-16 標的化変異

Country Status (11)

Country Link
US (1) US10508271B2 (enExample)
EP (1) EP3132036B8 (enExample)
JP (1) JP6621465B2 (enExample)
KR (1) KR102272684B1 (enExample)
CN (1) CN106460000B (enExample)
BR (1) BR112016023814B1 (enExample)
CA (1) CA2945574C (enExample)
DK (1) DK3132036T3 (enExample)
GB (2) GB201406970D0 (enExample)
MY (1) MY176328A (enExample)
WO (1) WO2015159087A1 (enExample)

Families Citing this family (66)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2013066438A2 (en) 2011-07-22 2013-05-10 President And Fellows Of Harvard College Evaluation and improvement of nuclease cleavage specificity
US9163284B2 (en) 2013-08-09 2015-10-20 President And Fellows Of Harvard College Methods for identifying a target site of a Cas9 nuclease
US9359599B2 (en) 2013-08-22 2016-06-07 President And Fellows Of Harvard College Engineered transcription activator-like effector (TALE) domains and uses thereof
US9526784B2 (en) 2013-09-06 2016-12-27 President And Fellows Of Harvard College Delivery system for functional nucleases
US9322037B2 (en) 2013-09-06 2016-04-26 President And Fellows Of Harvard College Cas9-FokI fusion proteins and uses thereof
US9340799B2 (en) 2013-09-06 2016-05-17 President And Fellows Of Harvard College MRNA-sensing switchable gRNAs
US10584358B2 (en) 2013-10-30 2020-03-10 North Carolina State University Compositions and methods related to a type-II CRISPR-Cas system in Lactobacillus buchneri
CN111218447B (zh) 2013-11-07 2024-10-11 爱迪塔斯医药有限公司 使用统治型gRNA的CRISPR相关方法和组合物
US20150166984A1 (en) 2013-12-12 2015-06-18 President And Fellows Of Harvard College Methods for correcting alpha-antitrypsin point mutations
US10787654B2 (en) 2014-01-24 2020-09-29 North Carolina State University Methods and compositions for sequence guiding Cas9 targeting
LT3105328T (lt) 2014-02-11 2020-07-10 The Regents Of The University Of Colorado, A Body Corporate Daugiakomponentis genomo konstravimas, sudarantis sąlygas crispr
EP3129490A4 (en) 2014-04-08 2017-10-04 North Carolina State University Methods and compositions for rna-directed repression of transcription using crispr-associated genes
AU2015298571B2 (en) 2014-07-30 2020-09-03 President And Fellows Of Harvard College Cas9 proteins including ligand-dependent inteins
US10450584B2 (en) 2014-08-28 2019-10-22 North Carolina State University Cas9 proteins and guiding features for DNA targeting and genome editing
WO2016177682A1 (en) 2015-05-06 2016-11-10 Snipr Technologies Limited Altering microbial populations & modifying microbiota
WO2016196361A1 (en) 2015-05-29 2016-12-08 North Carolina State University Methods for screening bacteria, archaea, algae, and yeast using crispr nucleic acids
AU2016280002B2 (en) 2015-06-15 2022-04-14 North Carolina State University Methods and compositions for efficient delivery of nucleic acids and RNA-based antimicrobials
US11286480B2 (en) 2015-09-28 2022-03-29 North Carolina State University Methods and compositions for sequence specific antimicrobials
WO2017070632A2 (en) 2015-10-23 2017-04-27 President And Fellows Of Harvard College Nucleobase editors and uses thereof
WO2017112620A1 (en) 2015-12-22 2017-06-29 North Carolina State University Methods and compositions for delivery of crispr based antimicrobials
US20190024123A1 (en) * 2016-01-08 2019-01-24 Novozymes A/S Genome Editing In Bacillus Host Cells
SG11201807025SA (en) * 2016-02-26 2018-09-27 Lanzatech New Zealand Ltd Crispr/cas systems for c-1 fixing bacteria
AU2017260714B2 (en) * 2016-05-01 2023-10-05 Duane CHUNG Harnessing heterologous and endogenous CRISPR-Cas machineries for efficient markerless genome editing in clostridium
GB201609811D0 (en) 2016-06-05 2016-07-20 Snipr Technologies Ltd Methods, cells, systems, arrays, RNA and kits
CN109688820B (zh) 2016-06-24 2023-01-10 科罗拉多州立大学董事会（法人团体） 用于生成条形码化组合文库的方法
WO2018027078A1 (en) 2016-08-03 2018-02-08 President And Fellows Of Harard College Adenosine nucleobase editors and uses thereof
AU2017308889B2 (en) 2016-08-09 2023-11-09 President And Fellows Of Harvard College Programmable Cas9-recombinase fusion proteins and uses thereof
WO2018039438A1 (en) 2016-08-24 2018-03-01 President And Fellows Of Harvard College Incorporation of unnatural amino acids into proteins using base editing
KR20240007715A (ko) 2016-10-14 2024-01-16 프레지던트 앤드 펠로우즈 오브 하바드 칼리지 핵염기 에디터의 aav 전달
WO2018119359A1 (en) 2016-12-23 2018-06-28 President And Fellows Of Harvard College Editing of ccr5 receptor gene to protect against hiv infection
KR20190123328A (ko) 2017-03-09 2019-10-31 프레지던트 앤드 펠로우즈 오브 하바드 칼리지 암 백신
WO2018165504A1 (en) 2017-03-09 2018-09-13 President And Fellows Of Harvard College Suppression of pain by gene editing
CN110914310A (zh) 2017-03-10 2020-03-24 哈佛大学的校长及成员们 胞嘧啶至鸟嘌呤碱基编辑器
IL306092A (en) 2017-03-23 2023-11-01 Harvard College Nucleic base editors that include nucleic acid programmable DNA binding proteins
US11560566B2 (en) 2017-05-12 2023-01-24 President And Fellows Of Harvard College Aptazyme-embedded guide RNAs for use with CRISPR-Cas9 in genome editing and transcriptional activation
US10011849B1 (en) 2017-06-23 2018-07-03 Inscripta, Inc. Nucleic acid-guided nucleases
US9982279B1 (en) 2017-06-23 2018-05-29 Inscripta, Inc. Nucleic acid-guided nucleases
US20230193241A1 (en) * 2017-06-25 2023-06-22 Snipr Technologies Limited Altering microbial populations & modifying microbiota
EP3658573A1 (en) 2017-07-28 2020-06-03 President and Fellows of Harvard College Methods and compositions for evolving base editors using phage-assisted continuous evolution (pace)
GB201712733D0 (en) 2017-08-08 2017-09-20 Snipr Tech Ltd Methods & cells
EP3676376B1 (en) 2017-08-30 2025-01-15 President and Fellows of Harvard College High efficiency base editors comprising gam
GB201716845D0 (en) 2017-10-13 2017-11-29 Green Biologics Ltd Process
CA3082251A1 (en) 2017-10-16 2019-04-25 The Broad Institute, Inc. Uses of adenosine base editors
US12406749B2 (en) 2017-12-15 2025-09-02 The Broad Institute, Inc. Systems and methods for predicting repair outcomes in genetic engineering
US10760075B2 (en) 2018-04-30 2020-09-01 Snipr Biome Aps Treating and preventing microbial infections
WO2019226953A1 (en) 2018-05-23 2019-11-28 The Broad Institute, Inc. Base editors and uses thereof
EP3820495A4 (en) 2018-07-09 2022-07-20 The Broad Institute Inc. RNA-PROGRAMMABLE EPIGENETIC RNA MODIFIERS AND THEIR USES
KR102208031B1 (ko) * 2018-08-20 2021-01-27 경상대학교산학협력단 표적 유전자의 활성산소종 매개 염기 돌연변이 유도 방법
US12264330B2 (en) 2018-10-01 2025-04-01 North Carolina State University Recombinant type I CRISPR-Cas system and uses thereof for killing target cells
WO2020072250A1 (en) 2018-10-01 2020-04-09 North Carolina State University Recombinant type i crispr-cas system and uses thereof for genome modification and alteration of expression
US10711267B2 (en) 2018-10-01 2020-07-14 North Carolina State University Recombinant type I CRISPR-Cas system
US12203123B2 (en) 2018-10-01 2025-01-21 North Carolina State University Recombinant type I CRISPR-Cas system and uses thereof for screening for variant cells
US11851663B2 (en) 2018-10-14 2023-12-26 Snipr Biome Aps Single-vector type I vectors
WO2020092453A1 (en) 2018-10-29 2020-05-07 The Broad Institute, Inc. Nucleobase editors comprising geocas9 and uses thereof
US12351837B2 (en) 2019-01-23 2025-07-08 The Broad Institute, Inc. Supernegatively charged proteins and uses thereof
US11142751B2 (en) 2019-03-07 2021-10-12 Auburn University CRISPR-cas system for Clostridium genome engineering and recombinant strains produced thereof
WO2020191241A1 (en) 2019-03-19 2020-09-24 The Broad Institute, Inc. Methods and compositions for editing nucleotide sequences
WO2020214842A1 (en) 2019-04-17 2020-10-22 The Broad Institute, Inc. Adenine base editors with reduced off-target effects
US12435330B2 (en) 2019-10-10 2025-10-07 The Broad Institute, Inc. Methods and compositions for prime editing RNA
US20230167467A1 (en) * 2020-04-15 2023-06-01 University of Alaska Anchorage Methods and compositions for the production of isobutene
WO2021211972A1 (en) * 2020-04-16 2021-10-21 Zymergen Inc. Circular-permuted nucleic acids for homology-directed editing
CA3177481A1 (en) 2020-05-08 2021-11-11 David R. Liu Methods and compositions for simultaneous editing of both strands of a target double-stranded nucleotide sequence
EP4165178A4 (en) * 2020-06-10 2024-06-19 North Carolina State University NOVEL TYPE I CRISPR-CAS SYSTEM FROM CLOSTRIDIA
CN112029699B (zh) * 2020-11-04 2021-06-08 中国农业科学院北京畜牧兽医研究所 一种基于内源CRISPR-Cas系统的丁酸梭菌基因编辑系统及其应用
EP4230721A1 (en) * 2022-02-17 2023-08-23 Evonik Operations GmbH Microorganisms with reduced competence
GB202209518D0 (en) 2022-06-29 2022-08-10 Snipr Biome Aps Treating & preventing E coli infections

Family Cites Families (16)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
NO323345B1 (no) 2002-01-07 2007-04-02 Norwegian Inst Of Fisheries An Forbedring av fiskeprodukter og fôr
GB0612301D0 (en) 2006-06-21 2006-08-02 Morvus Technology Ltd DNA molecules and methods
MX2009003605A (es) * 2006-10-03 2009-04-22 Metabolic Explorer Sa Procedimiento para integracion cromosomica y reemplazo de secuencia de adn en clostridia.
KR20100103810A (ko) 2007-12-10 2010-09-28 알리바 바이오파마수티컬스, 아이엔씨. 동종 재조합에 의한 표적화된 영역의 순차적인 치환 방법
GB0802842D0 (en) 2008-02-15 2008-03-26 Univ Nottingham Synthetic operon construction in clostridia
US20100075424A1 (en) 2008-05-08 2010-03-25 Northwestern University Methods and compositions for genetically engineering clostridia species
EP2206723A1 (en) 2009-01-12 2010-07-14 Bonas, Ulla Modular DNA-binding domains
WO2010127111A1 (en) 2009-04-30 2010-11-04 The Trustees Of Comlumbia University In The City Of New York In vivo assembly of dna via homologous recombination
WO2013133882A2 (en) 2011-12-16 2013-09-12 University Of Delaware Recombinant clostridium organism and method for isolation of double-crossover allelic exchange mutants
WO2013141680A1 (en) 2012-03-20 2013-09-26 Vilnius University RNA-DIRECTED DNA CLEAVAGE BY THE Cas9-crRNA COMPLEX
US9637739B2 (en) 2012-03-20 2017-05-02 Vilnius University RNA-directed DNA cleavage by the Cas9-crRNA complex
KR102955556B1 (ko) * 2012-12-12 2026-04-22 더 브로드 인스티튜트, 인코퍼레이티드 서열 조작을 위한 crispr-cas 성분 시스템, 방법 및 조성물
WO2014143381A1 (en) * 2013-03-09 2014-09-18 Agilent Technologies, Inc. Methods of in vivo engineering of large sequences using multiple crispr/cas selections of recombineering events
DK3004349T3 (en) * 2013-05-29 2018-06-06 Cellectis Sa A method for producing precise DNA cleavage using CAS9 nickase activity
ES2681622T3 (es) 2013-09-18 2018-09-14 Kymab Limited Métodos, células y organismos
LT3105328T (lt) * 2014-02-11 2020-07-10 The Regents Of The University Of Colorado, A Body Corporate Daugiakomponentis genomo konstravimas, sudarantis sąlygas crispr

Similar Documents

Publication Publication Date Title
JP2017511155A5 (enExample)
US20240002835A1 (en) Genetic tool for the transformation of clostridium bacteria
Song et al. CRISPR-Cas9D10A nickase-assisted genome editing in Lactobacillus casei
JP6621464B2 (ja) 欠失突然変異
Wang et al. Genome editing in Clostridium saccharoperbutylacetonicum N1-4 with the CRISPR-Cas9 system
CA2945574C (en) Process for producing targeted mutations in bacterial genomes with crispr/cas system
Li et al. CRISPR‐based genome editing and expression control systems in Clostridium acetobutylicum and Clostridium beijerinckii
Ehsaan et al. Mutant generation by allelic exchange and genome resequencing of the biobutanol organism Clostridium acetobutylicum ATCC 824
US11946067B2 (en) Optimized genetic tool for modifying Clostridium bacteria
Zhang et al. Markerless genome editing in Clostridium beijerinckii using the CRISPR-Cpf1 system
CN112725254B (zh) 一种l-高丝氨酸的生产菌株及其构建方法和应用
JP6473510B2 (ja) ビブリオで汎用される遺伝子ノックアウト用の自殺ベクターおよびその利用
Huang et al. Restriction-deficient mutants and marker-less genomic modification for metabolic engineering of the solvent producer Clostridium saccharobutylicum
CN106086056A (zh) 一种恶臭假单胞菌基因敲除和基因组精简系统
Wasels et al. A CRISPR/anti-CRISPR genome editing approach underlines the synergy of butanol dehydrogenases in Clostridium acetobutylicum DSM 792
Han et al. Harnessing the endogenous Type IC CRISPR-Cas system for genome editing in Bifidobacterium breve
CA2969294A1 (en) Clostridium acetobutylicum strains unable to produce hydrogen and useful for the continuous production of chemicals and fuels
US20230109758A1 (en) Genetically modified clostridium bacteria, preparation and uses of same
JP7661241B2 (ja) 細菌を改変するための最適化された遺伝子ツール
Omorotionmwan et al. Chromosomal engineering of inducible isopropanol-butanol-ethanol production in Clostridium acetobutylicum
Bengelsdorf et al. Host organisms: Clostridium acetobutylicum/Clostridium beijerinckii and related organisms
JP2020043824A (ja) 偏性嫌気性酢酸生成微生物、並びに、組換え微生物
JPWO2018070141A1 (ja) 偏性嫌気性酢酸生成微生物、並びに、組換え微生物
Dindhoria et al. Overview and Applications of CRISPR/Cas9 Based Genome Editing in Industrial Microorganisms
Zhang butanol production, Metabolic Engineering