JP2012511000A - ホスホイノシチド依存性キナーゼ1(pdk1)の阻害剤 - Google Patents
ホスホイノシチド依存性キナーゼ1(pdk1)の阻害剤 Download PDFInfo
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- UOLRTQNUPLLIMJ-INIZCTEOSA-N tert-butyl n-[(1r)-2-(3-amino-4-nitrophenoxy)-1-phenylethyl]carbamate Chemical compound C([C@H](NC(=O)OC(C)(C)C)C=1C=CC=CC=1)OC1=CC=C([N+]([O-])=O)C(N)=C1 UOLRTQNUPLLIMJ-INIZCTEOSA-N 0.000 description 1
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- 238000012360 testing method Methods 0.000 description 1
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- BPEWUONYVDABNZ-DZBHQSCQSA-N testolactone Chemical compound O=C1C=C[C@]2(C)[C@H]3CC[C@](C)(OC(=O)CC4)[C@@H]4[C@@H]3CCC2=C1 BPEWUONYVDABNZ-DZBHQSCQSA-N 0.000 description 1
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- 125000006169 tetracyclic group Chemical group 0.000 description 1
- 125000003718 tetrahydrofuranyl group Chemical group 0.000 description 1
- 125000003039 tetrahydroisoquinolinyl group Chemical group C1(NCCC2=CC=CC=C12)* 0.000 description 1
- 125000001712 tetrahydronaphthyl group Chemical group C1(CCCC2=CC=CC=C12)* 0.000 description 1
- 125000001412 tetrahydropyranyl group Chemical group 0.000 description 1
- 125000000147 tetrahydroquinolinyl group Chemical group N1(CCCC2=CC=CC=C12)* 0.000 description 1
- 125000005958 tetrahydrothienyl group Chemical group 0.000 description 1
- 125000003831 tetrazolyl group Chemical group 0.000 description 1
- WROMPOXWARCANT-UHFFFAOYSA-N tfa trifluoroacetic acid Chemical compound OC(=O)C(F)(F)F.OC(=O)C(F)(F)F WROMPOXWARCANT-UHFFFAOYSA-N 0.000 description 1
- 229960004559 theobromine Drugs 0.000 description 1
- 230000001225 therapeutic effect Effects 0.000 description 1
- 125000001113 thiadiazolyl group Chemical group 0.000 description 1
- 125000000335 thiazolyl group Chemical group 0.000 description 1
- 239000002562 thickening agent Substances 0.000 description 1
- 125000004568 thiomorpholinyl group Chemical group 0.000 description 1
- 229960001196 thiotepa Drugs 0.000 description 1
- 229960000984 tocofersolan Drugs 0.000 description 1
- 229960000303 topotecan Drugs 0.000 description 1
- XFCLJVABOIYOMF-QPLCGJKRSA-N toremifene Chemical compound C1=CC(OCCN(C)C)=CC=C1C(\C=1C=CC=CC=1)=C(\CCCl)C1=CC=CC=C1 XFCLJVABOIYOMF-QPLCGJKRSA-N 0.000 description 1
- 229960005026 toremifene Drugs 0.000 description 1
- VZCYOOQTPOCHFL-UHFFFAOYSA-N trans-butenedioic acid Natural products OC(=O)C=CC(O)=O VZCYOOQTPOCHFL-UHFFFAOYSA-N 0.000 description 1
- 230000037317 transdermal delivery Effects 0.000 description 1
- 206010044412 transitional cell carcinoma Diseases 0.000 description 1
- 229960001727 tretinoin Drugs 0.000 description 1
- 125000001425 triazolyl group Chemical group 0.000 description 1
- YFTHZRPMJXBUME-UHFFFAOYSA-N tripropylamine Chemical compound CCCN(CCC)CCC YFTHZRPMJXBUME-UHFFFAOYSA-N 0.000 description 1
- RYFMWSXOAZQYPI-UHFFFAOYSA-K trisodium phosphate Chemical compound [Na+].[Na+].[Na+].[O-]P([O-])([O-])=O RYFMWSXOAZQYPI-UHFFFAOYSA-K 0.000 description 1
- IHIXIJGXTJIKRB-UHFFFAOYSA-N trisodium vanadate Chemical compound [Na+].[Na+].[Na+].[O-][V]([O-])([O-])=O IHIXIJGXTJIKRB-UHFFFAOYSA-N 0.000 description 1
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- GBABOYUKABKIAF-IELIFDKJSA-N vinorelbine Chemical compound C1N(CC=2C3=CC=CC=C3NC=22)CC(CC)=C[C@H]1C[C@]2(C(=O)OC)C1=CC([C@]23[C@H]([C@@]([C@H](OC(C)=O)[C@]4(CC)C=CCN([C@H]34)CC2)(O)C(=O)OC)N2C)=C2C=C1OC GBABOYUKABKIAF-IELIFDKJSA-N 0.000 description 1
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- 239000002076 α-tocopherol Substances 0.000 description 1
- 235000004835 α-tocopherol Nutrition 0.000 description 1
Classifications
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D403/00—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00
- C07D403/02—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00 containing two hetero rings
- C07D403/12—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00 containing two hetero rings linked by a chain containing hetero atoms as chain links
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P35/00—Antineoplastic agents
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P43/00—Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
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- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Health & Medical Sciences (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Life Sciences & Earth Sciences (AREA)
- General Chemical & Material Sciences (AREA)
- Medicinal Chemistry (AREA)
- Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
- Veterinary Medicine (AREA)
- Pharmacology & Pharmacy (AREA)
- Public Health (AREA)
- Animal Behavior & Ethology (AREA)
- General Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
- Plural Heterocyclic Compounds (AREA)
- Peptides Or Proteins (AREA)
Abstract
Description
本発明は、PDKl活性を阻害する化合物を提供する。本発明はまた、かかる阻害化合物を含んでなる組成物、及び癌の治療を必要とする患者に該化合物を投与することによりPDKl活性を阻害する方法も提供する。
本発明の化合物は、PDKlの活性の阻害において有用である。本発明の第1の実施態様においては、PDKl活性の阻害剤は、式A:
nは、0、1、2、3、4、又は5であり;
Wは、独立して、C又はNであり、Yは、独立して、C又はNであり、Zは、独立して、C又はNであり、ただし、W、Y、及びZの少なくとも1つはNであり;
Xは、O、CH2、又はNHであり;
環Kは、アリール又はヘテロアリールであり;
L1は、C0−C6アルキル、C2−C6アルケニル、又はヘテロアリールであり、ここで、前記アルキルは、C1−C6アルキル又はフェニルで置換されていてもよく、ここで、前記フェニルは、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、ハロ、及びOHで置換されていてもよく;
L2は、C0−C6アルキル、C2−C6アルケニル、又はヘテロアリールであり、ここで、前記アルキルは、C1−C6アルキル又はフェニルで置換されていてもよく;
R1は、ヘテロシクリルであり、これは、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、NH(C=O)C1−C6アルキル、C2−C6アルケニル、CO2H、ハロ、OH、オキソ、及びNR8R9で置換されていてもよく;
R2は、独立して、H、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、C2−C6アルケニル、CO2H、ハロ、OH、及びNR8R9から選択され;
R3は、H、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、C2−C6アルケニル、CO2H、ハロ、OH、及びNR8R9から選択され;
R4は、H、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、C2−C6アルケニル、CO2H、ハロ、OH、及びNR8R9から選択され;
R5は、H、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、C2−C6アルケニル、CO2H、ハロ、OH、及びNR8R9から選択され;
R6及びR7は、独立して、H及びC1−C6アルキルから選択され;かつ
R8及びR9は、独立して、H及びC1−C6アルキルから選択される]
又はその薬学的に許容される塩若しくは立体異性体により例示される。
nは、1、2、又は3であり;
Wは、独立して、C又はNであり、かつYは、独立して、C又はNであり、ただし、W又はYの少なくとも1つはNであり;
Xは、O、CH2、又はNHであり;
L1は、C0−C5アルキル、又はC2−C5アルケニルであり;
L2は、C0−C6アルキル、C2−C6アルケニル、又はヘテロアリールであり、ここで、前記アルキルは、C1−C6アルキル又はフェニルで置換されていてもよく;
R1は、ヘテロシクリルであり、これは、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、NH(C=O)C1−C6アルキル、C2−C6アルケニル、CO2H、ハロ、OH、オキソ、及びNR8R9で置換されていてもよく;
R2は、ハロであり;
R3は、H、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、C2−C6アルケニル、CO2H、ハロ、OH、及びNR8R9から選択され;
R4は、H、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、C2−C6アルケニル、CO2H、ハロ、OH、及びNR8R9から選択され;
R5は、H、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、C2−C6アルケニル、CO2H、ハロ、OH、及びNR8R9から選択され;
R6及びR7は、独立して、H及びC1−C6アルキルから選択され;かつ
R8及びR9は、独立して、H及びC1−C6アルキルから選択される]
又はその薬学的に許容される塩若しくは立体異性体により例示される。
Wは、独立して、CH又はNであり、かつYは、独立して、CH又はNであり、ただし、W又はYの少なくとも1つはNであり;
Xは、O、又はNH2であり;
L1は、C0−C3アルキルであり;
L2は、C0−C3アルキルであり;かつ
R2は、ハロである]
又はその薬学的に許容される塩若しくは立体異性体により例示される。
1−(3,4−ジフルオロベンジル)−6−オキソ−N−{(1R)−2−[(2−オキソ−2,3−ジヒドロ−1H−ベンズイミダゾール−5−イル)オキシ]−1−フェニルエチル}−1,6−ジヒドロピリミジン−5−カルボキサミド;及び
4−(3,4−ジフルオロベンジル)−3−オキソ−N−{(1R)−2−[(2−オキソ−2,3−ジヒドロ−1H−ベンズイミダゾール−5−イル)オキシ]−1−フェニルエチル}−3,4−ジヒドロピラジン−2−カルボキサミド;
又はその薬学的に許容される塩若しくは立体異性体を包含する。
3−ホスホイノシチド依存性タンパク質キナーゼ−1(PDK1)は、C−末端プレクストリン相同(PH)ドメイン(残基459−550)及びN−末端キナーゼドメイン(残基70−359)を含んでなる、556個のアミノ酸を含有する酵素である。PDKlのPHドメインは、ホスファチジルイノシトール3−キナーゼ(PI3K)などのホスファチジルイノシトールキナーゼによって産生されるホスファチジルイノシトール(例えば、ホスファチジルイノシトール4,5−二リン酸及びホスファチジルイノシトール3,4,5−三リン酸)と結合し、そのレベルは一部、PTEN(ホスファターゼ及びテンシンホモログ)などのホスファターゼによって調節されている。PDKlは、PI3K/Akt経路において中心的役割を果たしており、重要な上流活性化キナーゼとしての役割の故に、「マスターレギュレーター」キナーゼと呼ばれてきたが、その役割は、PKBの3種のアイソフォーム全て(PKBα、PKBβ、PKBγ、各々Akt1、Akt2、及びAkt3としても公知)、RSK(3種のアイソフォーム、RSK1、RSK2、RSK3、p90RSKとしても公知)、p70S6K(2種のアイソフォーム、S6K1及びS6K2)、SGK1、及びPKCを包含するがこれに限定されない、キナーゼAGCファミリーの多くのキナーゼに対し、いわゆるT−ループリン酸化部位をリン酸化するというものである。
するための方法を提供する。
エタノール(4.99ml)中の、塩酸ホルムアミジン(4.02g、49.9mmol)及びジエチルエトキシメチレンマロナート(5ml、24.95mmol)の混合物を、120℃(マイクロ波照射による)で15時間加熱した。反応混合物を室温に冷却した後、酢酸エチル、塩酸(1M)、及び水を添加した。水層を、酢酸エチルで洗浄し、次に3:1 クロロホルム:イソプロパノールで抽出した。合わせた有機抽出物を、硫酸マグネシウム上で乾燥し、減圧下で濃縮して、エチル6−オキソ−1,6−ジヒドロピリミジン−5−カルボキシラートを、橙色の固体として得た。LRMS(ESI)(C7H9N2O3)[M+H]+,計算値169.1;実測値169.1.
水素化ナトリウム(0.262g、6.54mmol、鉱物油中60%分散物)及び
エチル6−オキソ−1,6−ジヒドロピリミジン−5−カルボキシラート(1g、5.95mmol)の混合物を、DMF(11.89ml)中に溶解した。室温で30分後、3,4−ジフルオロベンジルブロミド(0.761ml、5.95mmol)を添加した。反応混合物を、室温で一晩攪拌し、次いで塩酸水溶液(10%)に注入した。水層を、酢酸エチルで抽出した。合わせた有機抽出物を、食塩水で洗浄し、硫酸ナトリウム上で乾燥し、減圧下で濃縮した。残渣を、シリカゲル上でのカラムクロマトグラフィーにより、酢酸エチル/ヘキサンで溶出して精製し、エチル1−(3,4−ジフルオロベンジル)−6−オキソ−1,6−ジヒドロピリミジン−5−カルボキシラートを、オフホワイトの固体として得た。LRMS(ESI)(C14H13F2N2O3)[M+H]+,計算値295.1;実測値295.1.
メタノール(3195μl)中のエチル1−(3,4−ジフルオロベンジル)−6−オキソ−1,6−ジヒドロピリミジン−5−カルボキシラート(470mg、1.597mmol)の溶液に、0℃で、水酸化ナトリウム水溶液(1917μl、1.917mmol、1M)を滴下添加した。室温に2時間温めた後、反応混合物を減圧下で濃縮した。残渣に、水(5mL)及び酢酸エチル(2.5mL)を添加した。水層を、酢酸エチルで洗浄し、次に塩酸水溶液(1M)でpH1に酸性化した。次いで水層を、酢酸エチルで抽出した。合わせた有機抽出物を、水及び食塩水で洗浄し、硫酸マグネシウム上で乾燥し、減圧下で濃縮して、1−(3,4−ジフルオロベンジル)−6−オキソ−1,6−ジヒドロピリミジン−5−カルボン酸を、白色固体として得た。LRMS(ESI)(C12H9F2N2O3)[M+H]+,計算値267.1;実測値267.0.
(R)−(−)−2−フェニルグリシノール(5.043g、36.8mmol)を、250mLのRBF(丸底フラスコ)中に入れ、窒素雰囲気下においた。DMF(100mL)を添加し、透明な無色の溶液が得られるまで反応を攪拌した。次いでNaH(2.206g、55.1mmol)を添加し、続いてDMF(10mL)を洗浄液として添加し、激しい反応(ガス発生)を生じた。反応を室温で、ガス発生が鎮まるまで攪拌し、赤みがかった不均一の混合物を得た。次いで5−フルオロ−2−ニトロアニリン(6.89g、44.1mmol)を、続いてDMF(10mL)を添加し、これにより直ちに鮮紅色を生じた。反応を、室温で攪拌させておき、LC−MSでモニターした。これを、酢酸エチル(200mL)及びNaHCO3希釈水溶液(250mL)を含有するエレンマイヤーフラスコに添加することにより、反応をクエンチした。分液漏斗中で相を分離し、有機層を水(150mL)で、次に食塩水(100mL)で洗浄し、無水Na2SO4上で乾燥し、真空中で濃縮した。次いで反応を、シリカゲルカラム(5−75% EtOAc(n−ヘプタン中))により精製して、高純度の5−[(2R)−2−アミノ−2−フェニルエトキシ]−2−ニトロアニリンの2つの分画を、黄色−橙色の油として得たが、双方ともに残留性DMFが混入していた。LRMS(ESI)(C14H16N3O3)[M+H]+,計算値274.1;実測値274.1.
5−[(2R)−2−アミノ−2−フェニルエトキシ]−2−ニトロアニリン(中間体4)(2.35g、8.60mmol)を、窒素雰囲気下で、100mLのRBFに入れ、続いてTHF(30mL)を入れた。N,N−ジイソプロピルエチルアミン(2.25mL、12.9mmol)を添加し、反応を10分間攪拌し、続いて二炭酸ジ−tert−ブチル(2.40mL、10.3mmol)を添加した。次いで反応を、室温で3時間攪拌し、次にLC−MSにより分析し、これにより反応が完了したことが示された。反応を、酢酸エチル(300mL)及びNaHCO3希釈水溶液(150mL)を含有する分液漏斗に添加し、相を分離し、有機層を食塩水(100mL)で洗浄し、無水Na2SO4上で乾燥し、真空中で濃縮して、tert−ブチル[(1R)−2−(3−アミノ−4−ニトロフェノキシ)−1−フェニルエチル]カルバメートを、黄色の固体として得た。
LRMS(ESI)(C19H23N3NaO5)[M+Na]+,計算値396.2;実測値396.2.
tert−ブチル[(1R)−2−(3−アミノ−4−ニトロフェノキシ)−1−フェニルエチル]カルバメート(中間体5)(346mg、0.93mmol)を、マイクロ波反応バイアル(10−20mL)に入れ、続いて鉄(259mg、4.63mmol)、水(4mL)、塩化アンモニウム(40mg、0.74mmol)、及び最後にエタノール(4mL)を入れた。反応バイアルを密封し、設定により80℃で20時間加熱した。反応を、酢酸エチル(100mL)及び食塩水(75mL)を含有する分液漏斗に添加し、相を分離し、有機層を食塩水(75mL)で再度洗浄した。次いで、酢酸エチル層を真空中で濃縮して、tert−ブチル[(1R)−2−(3,4−ジアミノフェノキシ)−1−フェニルエチル]カルバメートを、橙色の固体として得た。LRMS(ESI)(C19H26N3O3)[M+H]+,計算値344.2;実測値344.2.
tert−ブチル[(1R)−2−(3,4−ジアミノフェノキシ)−1−フェニルエチル]カルバメート(中間体6)(318mg、0.93mmol)を、窒素雰囲気下で、50mLのRBFに入れ、DMF(5mL)中に溶解した。CDI(135mg、0.83mmol)を添加し、反応を室温で4時間攪拌した。反応を、酢酸エチル(125mL)及びNaHCO3希釈水溶液(75mL)を含有する分液漏斗に添加し、相を分離し、有機層を食塩水(75mL)で洗浄し、無水Na2SO4上で乾燥し、その後、真空中で濃縮した。次いで粗生成物混合物を、シリカゲルクロマトグラフィーにより精製して、tert−ブチル{(1R)−2−[(2−オキソ−2,3−ジヒドロ−1H−ベンズイミダゾール−5−イル)オキシ]−1−フェニルエチル}カルバメートを、白色固体として得た。1H NMR(500MHz,C2D6SO)δ10.49(s,1H),10.37(s,1H),7.54(d,1H),7.34(m,4H),7.25(t,1H),6.77(d,1H),6.48(s,2H),4.86(q,1H),3.98(m,2H),1.37(s,9H).LRMS(ESI)(C16H16N3O4)[M−C4H8+H]+,計算値314.1;実測値314.1.
tert−ブチル{(1R)−2−[(2−オキソ−2,3−ジヒドロ−1H−ベンズイミダゾール−5−イル)オキシ]−1−フェニルエチル}カルバメート(中間体7)(67mg、0.18mmol)を、窒素雰囲気下で、10mLのRBFに入れ、THF(2mL)中に溶解した。HCl(1mL、4.0mmol)(1,4−ジオキサン中4M)を添加し、反応を室温で16時間攪拌した。反応を次に、真空中で濃縮し、THFによる希釈/濃縮のサイクルを繰り返し、残留するHClを最少化して、5−[(2R)−2−アミノ−2−フェニルエトキシ]−1,3−ジヒドロ−2H−ベンゾイミダゾール−2−オン塩酸塩を、黄色の固体として得た。LRMS(ESI)(C15H16N3O2)[M+H]+,計算値270.1;実測値270.1.
DMA(710μl)中の、5−[(2R)−2−アミノ−2−フェニルエトキシ]−1,3−ジヒドロ−2H−ベンゾイミダゾール−2−オン塩酸塩(38mg、0.124mmol)、1−(3,4−ジフルオロベンジル)−6−オキソ−1,6−ジヒドロピリミジン−5−カルボン酸(33.1mg、0.124mmol)、及びN,N−ジイソプロピルエチルアミン(65.1μl、0.373mmol)の溶液に、O−(7−アザベンゾトリアゾール−1−イル)−N,N,N’,N’−テトラメチルウロニウムヘキサフルオロホスファート(54.3mg、0.143mmol)を添加した。室温で90分間の攪拌後、反応混合物を水、アセトニトリル、及びDMSOで希釈した。この溶液を、逆相分取HPLC(C−18)により、アセトニトリル/水+0.05% TFAで溶出して精製し、1−(3,4−ジフルオロベンジル)−6−オキソ−N−{(1R)−2−[(2−オキソ−2,3−ジヒドロ−1H−ベンゾイミダゾール−5−イル)オキシ]−1−フェニルエチル}−1,6−ジヒドロピリミジン−5−カルボキサミドを、HPLC分画の中和、抽出、及び乾燥の後に、白色固体として得た。1H NMR(500MHz,C2D6SO)δ10.51(s,1H),10.38(s,1H),9.73(d,1H),8.95(s,1H),8.67(s,1H),7.52(m,1H),7.41(m,3H),7.34(t,2H),7.25(m,2H),6.74(d,1H),6.49(d,2H),5.36(m,1H),5.19(t,2H),4.26(m,1H),4.19(m,1H).LRMS(ESI)(C27H22F2N5O4)[M+H]+,計算値518.2;実測値518.1.
メチル2−ヒドロキシ−3−ピラジンカルボキシラート(103mg、0.67mmol)(フルクルム・サイエンティフィック社(Fulcrum Scientific Ltd.)から入手)を、窒素雰囲気下で、25mLのRBFに入れた。DMF(3mL)を、続いてNaH(33mg、0.83mmol)を添加し、反応を室温で20分間攪拌した。3,4−ジフルオロベンジルブロミド(0.094mL、0.735mmol)を添加し、反応を室温で一晩攪拌し、LC−MSにより反応の完了を検出した。反応を、酢酸エチル(125mL)及びNaHCO3希釈水溶液(75mL)を含有する分液漏斗に添加し、相を分離し、有機層を食塩水で洗浄し、無水Na2SO4上で乾燥し、次に真空中で濃縮した。粗生成物を、シリカゲルクロマトグラフィーにより、10−100% EtOAc(n−ヘプタン中)を使用して精製し、メチル4−(3,4−ジフルオロベンジル)−3−オキソ−3,4−ジヒドロピラジン−2−カルボキシラートを、黄色の固体として得た。1H NMR(500MHz,C2D6SO)δ8.08(d,1H),7.49(t,1H),7.44(d,1H),7.42(t,1H),7.23(m,1H),5.09(s,2H),3.80(s,3H).LRMS(ESI)(C13H11F2N2O3)[M+H]+,計算値281.1;実測値281.1.
メチル4−(3,4−ジフルオロベンジル)−3−オキソ−3,4−ジヒドロピラジン−2−カルボキシラート(110mg、0.39zmol)を、10mLのRBFに入れ、THF(3mL)中に溶解した。NaOH(1mL、2.000mmol)(2N溶液)を添加し、反応を室温で攪拌した。次に反応を、室温で一晩攪拌させておき、次いでLC−MSで分析したところ、反応の完了を示した。次に反応を、1N HCl(2mL)の添加により中和し、次いで飽和塩化ナトリウムで飽和した。得られた混合物を、次に酢酸エチル(3x50mL)で洗浄し、合わせた有機層を、次いで食塩水(25mL)で洗浄し、真空中で濃縮して、4−(3,4−ジフルオロベンジル)−3−オキソ−3,4−ジヒドロピラジン−2−カルボン酸を、黄色の固体として得た。LRMS(ESI)(C12H9F2N2O3)[M+H]+,計算値267.1;実測値267.0.
4−(3,4−ジフルオロベンジル)−3−オキソ−3,4−ジヒドロピラジン−2−カルボン酸(48mg、0.18mmol)を、窒素雰囲気下で、25mLのRBFに入れ、続いてHATU(82mg、0.22mmol)を、次にNMP(1.0mL)を、最後にN,N−ジイソプロピルエチルアミン(0.11mL、0.63mmol)を入れた。反応を、室温で5分間攪拌し、NMP(1.0mL)中の5−[(2R)−2−アミノ−2−フェニルエトキシ]−1,3−ジヒドロ−2H−ベンゾイミダゾール−2−オン(55mg、0.18mmol)の溶液に添加した。反応を、室温で40分間攪拌し、次に、酢酸エチル(75mL)及びNH4Cl希釈水溶液(50mL)を含有する分液漏斗に添加し、相を分離し、有機層を飽和NaHCO3水溶液(50mL)で、次に食塩水(50mL)で洗浄し、無水Na2SO4上で乾燥し、次に真空中で濃縮した。粗生成物を、シリカゲルクロマトグラフィー(10グラムカラム)により、0−10% CH3OH(CH2Cl2中)を使用して精製し、生成物を8% CH3OH(CH2Cl2中)において溶出して、4−(3,4−ジフルオロベンジル)−3−オキソ−N−{(1R)−2−[(2−オキソ−2,3−ジヒドロ−1H−ベンゾイミダゾール−5−イル)オキシ]−1−フェニルエチル}−3,4−ジヒドロピラジン−2−カルボキサミドを、明黄色の固体として溶出した。1H NMR(500MHz,C2D6SO)δ10.51(s,1H),10.38(s,1H),9.82(d,1H),8.05(d,1H),7.57(d,1H),7.50(m,1H),7.43(m,3H),7.35(t,2H),7.27(t,1H),7.24(m,1H),6.75(d,1H),6.51(d,2H),5.34(m,1H),5.16(s,2H),4.09(m,2H).LRMS(ESI)(C27H23F2N5O4)[M+H]+,計算値518.2;実測値518.2.
インビトロのPDKlキナーゼアッセイ
活性化された組換え完全長の、mT(Glu−Glu−Phe)タグ付きヒトPDK1を使用して、本発明の化合物がこのキナーゼの酵素活性を調節するかどうかを測定した。
1. 384ウェルプレートにて、3倍連続希釈された化合物溶液を、100%ジメチルスルホキシド(DMSO)中で、所望の終濃度の20倍に調製する。
2. 62.5mM ヘペス(HEPES)(pH7.5)、12.5mM MgCl2、0.013% Brij−35、1.25mM EGTA、2.5mM ジチオスレイトール、1.25nM 組換えPDK1、及び375nM ビオチン化合成ペプチド基質(ビオチン−GGDGATMKTFCGGTPSDGDPDGGEFTEF−COOH(配列番号:1)を含有する、主反応混合物を調製する。
3. 黒色のアッセイプレートにて、ウェル当たり、化合物溶液(又はDMSO) 2.5μl、及び主反応混合物 22.5μlを添加する。10分間プレインキュベートする。ウェル当たり6μlの0.25mM MgATPを添加することにより、キナーゼ反応を開始する。反応を、室温で25分間進行させる。反応の最終条件は、1nM PDK1、300nM ペプチド基質、5μM MgATP、10mM MgCl2、2mM DTT、50mM ヘペス(pH7.5)、0.01% Brij−35、1mM EGTA、及び5%DMSOである。
4. キナーゼ反応を、10mM EDTA、1xランス検出バッファー(Lance Detection Buffer)(カタログNo.CR97−100、パーキンエルマー)、TBS中の1% スーパーブロッキング(SuperBlocking)(カタログNo.37535、ピアース)、5nM ホスホ−Akt(T308)モノクローナル抗体(カタログNo.4056、セル・シグナリング・テクノロジーズ(Cell Signaling Technologies))、5nM ランス(Lance)標識Eu−抗ウサギIgG(カタログNo.AD0083、パーキンエルマー)、及び100nM ストレプトアビジン−アロフィコシアニンコンジュゲート(カタログNo.PJ25S、プロザイム(Prozyme))を含有する、停止/検出バッファー 30μlで停止する。
5. 60分後、HTRFモードのエンビジョン(Envision)リーダー(パーキンエルマー)でHTRFシグナルを読み取る。
6. 化合物濃度とHTRFシグナルとの間に観察された関係を、4−パラメータロジスティック方程式にあてはめることにより、IC50を決定する。
目的:
PI3’K経路に対するPD1阻害剤の阻害能(IC50)を、PC3細胞において、
オデッセイ(Odyssey)ウエスタンブロット分析、及びPDKlの2つの直接の基質である、RSK(Ser221)及びAKT(Thr308)と、下流のエフェクター分子S6RP(235/236)とに対するリン酸特異的抗体のカクテル、を使用して測定すること。
PC−3細胞を、10% FBS、1x L−グルタミン、1x 非必須アミノ酸、1x ピルビン酸ナトリウム、及び1x Hepesを加えたイーグルMEM中で増殖させる。他の細胞を使用してもよい。
一次抗体:
P*Akt308−セル・シグナリング、カタログNo.4056
P*RSKS221−バイオソース(Biosource)カタログNo.44 924G
P*S6RP235/236−セル・シグナリング カタログNo.2211
P*−p44/42 MAPキナーゼ(Thre202/Tyr204)−セル・シグナリング カタログNo.9101
Total eIF4E−セル・シグナリング カタログNo.9742
二次抗体:
赤外線(IR)標識ヤギ抗マウスIRDye600(LI−COR カタログNo.926−32221)
赤外線(IR)標識ヤギ抗ウサギIRDye800CW(LI−COR カタログNo.926−32210)
参考化合物(経路阻害剤)
ラパマイシン−カルビオケム(Calbiochem)、553211
LY294002−カルビオケム、440204
プロテアーゼ・インヒビター・タブレット−ロシュ(Roche)11836145001
ペイジルーラー・プレステインド・プロテイン・ラダー(PageRuler Prestained Protein Ladder)−ファーメンタス(Fermentas)、SM0671
ニトロセルロース膜
溶解ストック(4℃で保存)
20mM トリスHCl、pH7.5
150mM NaCl
15% グリセロール
1% イゲパル(Igepal)
完全溶解バッファー
1M β−グリセロールリン酸 1.25mL
0.5M NaF 5mL
0.1M NaPPi 5mL
100mM オルトバナジン酸ナトリウム 0.5mL
プロテアーゼ・インヒビター・タブレット 1
溶解ストックを50mLまで充填し、10mLのアリコートを作成し、凍結する。使用に先立ち、1つのアリコートに、200mM PMSF 100uLを添加する。
20mM トリスHCl、pH7.5
150mM NaCl
0.05% ツイーン−20
TBS
20mM トリスHCl、pH7.5
150mM NaCl
ブロッキングバッファー
オデッセイ・ブロッキングバッファー(LI−COR、カタログNo.927−40000)
一次希釈剤
4% BSAフラクション5(PBS中)
0.02% ツイーン−20
0.5% アジ化ナトリウム
4x SDSサンプルバッファー
完全増殖培地中での化合物刺激の24時間前の細胞播種
1. PC−3細胞を、T150フラスコ内で、標準的な組織培養法を用いて、細胞が近集密状態(1.0x107)に達するまで増殖させる。
2. 増殖培地を除去し、細胞を無菌の1xPBSで洗浄し、トリプシン 3mlの使用により、細胞をトリプシン処理して移動させる。
3. 移動した細胞を、培地 30mlで中和し、50mlのチューブに移す。
4. チューブを短時間ボルテックス処理して再懸濁させ、細胞懸濁液を完全に混合する。
5. 細胞を計数し、培地で希釈して、1mL当たり150,000細胞の濃度とする。
6. 細胞懸濁液 1mlを、12ウェルプレートの各ウェルに、リピートピペッターを用いて分配し、37℃、5%CO2にて24時間インキュベートする。
1. 96ウェルマスタープレートを使用して、PDKl阻害剤の3倍希釈シリーズを、DMSO中に作成する(7つの異なる化合物濃度、及び化合物を含まないDMSOコントロール)。濃度は、アッセイにおいて使用する最終濃度の200倍とする。
2. 細胞を刺激するため、化合物/DMSO 5μLを、細胞を入れた各ウェルに添加し、37℃、5%CO2にて、24時間インキュベートする。
1. 翌日、増殖培地を除去し、冷却した1x PBSで洗浄し、PBSを完全に除去した後、溶解バッファー 100uLを各ウェルに添加する。
2. 低温室内で、シェーカー上でプレートを10分間振盪する。
3. 各ウェルから溶解物を収集し、氷上に立たせた1.5mLのエッペンドルフチューブに移す。
4. 4℃で、13,000rpmで5分間遠沈する。
5. 溶解物 90uLを、4x SDSローディングバッファー 30uLを含有する新たなエッペンドルフチューブに移し入れる。
6. チューブを、70℃のヒートブロック中に7分間置き、−80℃でサンプルを保存する。
1. 18ウェルの、10%又は4−20% トリスグリシンバイオラッド(Biorad)ゲル上で、ウェル当たりサンプル 30uL及び着色分子量マーカー 2uLを負荷することにより、サンプルを流す(70V、一定、40分間)。1番目と9番目のウェルに、ラダーを負荷する。
2. バイオ−ラッド(Bio−Rad)システムを用いてニトロセルロース上にブロットする(70V、350mA、40分間)。
3. 膜の非特異的結合を、オデッセイ・ブロッキングバッファー中で、室温で1時間ブロックする。
4. 一次抗体を、0.1% ツイーン20を含有するオデッセイ・ブロッキングバッファー中に希釈する(すなわち、各々を1:1000に希釈することにより、3種の抗体(P*AKT、P*S6RP、P*RSK)のカクテルを作成する)。低温室中で一晩、振盪しながらインキュベートする。
5. 0.1% ツイーン20を加えたPBS中で、室温で4x5分間、膜を洗浄する。
6. 0.1% ツイーンを含有するオデッセイ・ブロッキングバッファー中で、蛍光標識二次抗体を希釈する(1:10,000)。
7. ブロットを、二次抗体中で、室温で60−90分間インキュベートする。長時間の光への暴露を避ける。
8. 0.1% ツイーン20を加えたPBS中で、室温で4x5分間、膜を洗浄する。光から保護する。
9. 膜をPBS中ですすぎ、残留するツイーン20を除去する。この時点で、膜はスキャンできるようになっている。
1. 適切なチャンネルでスキャンし、スキャン完了まで膜を光から保護する。シグナルは、光から保護した場合、数カ月間は安定である。膜は、4℃のPBSバッファー中に保存するか、又は乾燥して保存してもよい。
2. オデッセイ・ソフトウェアを使用してバンドを定量し、負荷コントロール(mAb)に対し標準化する。
Claims (6)
- 式A:
nは、0、1、2、3、4、又は5であり;
Wは、独立して、C又はNであり、Yは、独立して、C又はNであり、Zは、独立して、C又はNであり、ただし、W、Y、及びZの少なくとも1つはNであり;
Xは、O、CH2、又はNHであり;
環Kは、アリール又はヘテロアリールであり;
L1は、C0−C6アルキル、C2−C6アルケニル、又はヘテロアリールであり、ここで、前記アルキルは、C1−C6アルキル又はフェニルで置換されていてもよく、ここで、前記フェニルは、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、ハロ、及びOHで置換されていてもよく;
L2は、C0−C6アルキル、C2−C6アルケニル、又はヘテロアリールであり、ここで、前記アルキルは、C1−C6アルキル又はフェニルで置換されていてもよく;
R1は、ヘテロシクリルであり、これは、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、NH(C=O)C1−C6アルキル、C2−C6アルケニル、CO2H、ハロ、OH、オキソ、及びNR8R9で置換されていてもよく;
R2は、独立して、H、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、C2−C6アルケニル、CO2H、ハロ、OH、及びNR8R9から選択され;
R3は、H、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、C2−C6アルケニル、CO2H、ハロ、OH、及びNR8R9から選択され;
R4は、H、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、C2−C6アルケニル、CO2H、ハロ、OH、及びNR8R9から選択され;
R5は、H、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、C2−C6アルケニル、CO2H、ハロ、OH、及びNR8R9から選択され;
R6及びR7は、独立して、H及びC1−C6アルキルから選択され;かつ
R8及びR9は、独立して、H及びC1−C6アルキルから選択される]
の化合物、又はその薬学的に許容される塩若しくは立体異性体。 - 式B:
nが、1、2、又は3であり;
Wが、独立して、C又はNであり、かつYが、独立して、C又はNであり、ただし、W又はYの少なくとも1つがNであり;
Xが、O、CH2、又はNHであり;
L1が、C0−C5アルキル、又はC2−C5アルケニルであり;
L2が、C0−C6アルキル、C2−C6アルケニル、又はヘテロアリールであり、ここで、前記アルキルは、C1−C6アルキル又はフェニルで置換されていてもよく;
R1が、ヘテロシクリルであり、これは、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、NH(C=O)C1−C6アルキル、C2−C6アルケニル、CO2H、ハロ、OH、オキソ、及びNR8R9で置換されていてもよく;
R2が、ハロであり;
R3が、H、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、C2−C6アルケニル、CO2H、ハロ、OH、及びNR8R9から選択され;
R4が、H、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、C2−C6アルケニル、CO2H、ハロ、OH、及びNR8R9から選択され;
R5が、H、C1−C6アルキル、C1−C6アルキル−OH、O(C1−C6)アルキル、C2−C6アルケニル、CO2H、ハロ、OH、及びNR8R9から選択され;
R6及びR7が、独立して、H及びC1−C6アルキルから選択され;かつ
R8及びR9が、独立して、H及びC1−C6アルキルから選択される]
の、請求項1に記載の化合物、又はその薬学的に許容される塩若しくは立体異性体。 - 1−(3,4−ジフルオロベンジル)−6−オキソ−N−{(1R)−2−[(2−オキソ−2,3−ジヒドロ−1H−ベンズイミダゾール−5−イル)オキシ]−1−フェニルエチル}−1,6−ジヒドロピリミジン−5−カルボキサミド;及び
4−(3,4−ジフルオロベンジル)−3−オキソ−N−{(1R)−2−[(2−オキソ−2,3−ジヒドロ−1H−ベンズイミダゾール−5−イル)オキシ]−1−フェニルエチル}−3,4−ジヒドロピラジン−2−カルボキサミド;
から選択される、請求項1に記載の化合物、又はその薬学的に許容される塩若しくは立体異性体。 - 医薬担体と、そこに分散された治療有効量の請求項1に記載の化合物とを含んでなる、医薬組成物。
- その処置を要する哺乳類における癌の治療又は予防に有用な医薬の製造のための、請求項1に記載の化合物の使用。
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ES2812452T3 (es) | 2015-06-11 | 2021-03-17 | International Soc For Drug Development S R L | Compuestos de 2-oxo-1,2-dihidropiridin-3-carboxamida y su uso como inhibidores de PDK1 |
CA2992945A1 (en) | 2015-07-17 | 2017-01-26 | Memorial Sloan-Kettering Cancer Center | Combination therapy using pdk1 and pi3k inhibitors |
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- 2009-11-24 EP EP09830890A patent/EP2373636A4/en not_active Withdrawn
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Publication number | Priority date | Publication date | Assignee | Title |
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JP2020502252A (ja) * | 2016-12-23 | 2020-01-23 | フェリシテックス・セラピューティクス,インコーポレイテッド | Dyrk1aおよび/またはdyrk1bキナーゼの阻害剤としてのキノリンの誘導体 |
JP7134973B2 (ja) | 2016-12-23 | 2022-09-12 | フェリシテックス・セラピューティクス,インコーポレイテッド | Dyrk1aおよび/またはdyrk1bキナーゼの阻害剤としてのキノリンの誘導体 |
JP2022166286A (ja) * | 2016-12-23 | 2022-11-01 | フェリシテックス・セラピューティクス,インコーポレイテッド | Dyrk1aおよび/またはdyrk1bキナーゼの阻害剤としてのキノリンの誘導体 |
Also Published As
Publication number | Publication date |
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US8552019B2 (en) | 2013-10-08 |
US20110230500A1 (en) | 2011-09-22 |
CA2745165A1 (en) | 2010-06-10 |
EP2373636A4 (en) | 2012-10-17 |
AU2009322656A1 (en) | 2010-06-10 |
EP2373636A1 (en) | 2011-10-12 |
WO2010065384A1 (en) | 2010-06-10 |
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