JP2004118819A - 大規模蛋白質相互作用データの効率的視覚化技法 - Google Patents

大規模蛋白質相互作用データの効率的視覚化技法 Download PDF

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Publication number
JP2004118819A
JP2004118819A JP2002319839A JP2002319839A JP2004118819A JP 2004118819 A JP2004118819 A JP 2004118819A JP 2002319839 A JP2002319839 A JP 2002319839A JP 2002319839 A JP2002319839 A JP 2002319839A JP 2004118819 A JP2004118819 A JP 2004118819A
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protein interaction
interaction data
graph
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node
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English (en)
Japanese (ja)
Inventor
Kyung Sook Han
ハン　キュン　ソーク
Byong-Hyon Ju
ジュ　ビョン　ヒョン
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Inha University
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Inha University
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    • G—PHYSICS
    • G06—COMPUTING OR CALCULATING; COUNTING
    • G06T—IMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T17/00—Three dimensional [3D] modelling, e.g. data description of 3D objects
    • C—CHEMISTRY; METALLURGY
    • C40—COMBINATORIAL TECHNOLOGY
    • C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B30/00—Methods of screening libraries
    • C40B30/04—Methods of screening libraries by measuring the ability to specifically bind a target molecule, e.g. antibody-antigen binding, receptor-ligand binding
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
    • G01N33/6845—Methods of identifying protein-protein interactions in protein mixtures
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B45/00—ICT specially adapted for bioinformatics-related data visualisation, e.g. displaying of maps or networks

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  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Chemical & Material Sciences (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biophysics (AREA)
  • Immunology (AREA)
  • Biotechnology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Theoretical Computer Science (AREA)
  • Hematology (AREA)
  • Analytical Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Biomedical Technology (AREA)
  • Organic Chemistry (AREA)
  • Medical Informatics (AREA)
  • Evolutionary Biology (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Urology & Nephrology (AREA)
  • Biochemistry (AREA)
  • Medicinal Chemistry (AREA)
  • General Physics & Mathematics (AREA)
  • Microbiology (AREA)
  • Food Science & Technology (AREA)
  • Data Mining & Analysis (AREA)
  • Pathology (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • General Chemical & Material Sciences (AREA)
  • Cell Biology (AREA)
  • Genetics & Genomics (AREA)
  • Computer Graphics (AREA)
  • Geometry (AREA)
  • Software Systems (AREA)
  • Information Retrieval, Db Structures And Fs Structures Therefor (AREA)
  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)
JP2002319839A 2002-09-23 2002-11-01 大規模蛋白質相互作用データの効率的視覚化技法 Pending JP2004118819A (ja)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
KR10-2002-0057604A KR100470977B1 (ko) 2002-09-23 2002-09-23 대규모 단백질 상호작용 데이터의 효율적 시각화 기법

Related Child Applications (1)

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JP2005099514A Division JP2005322216A (ja) 2002-09-23 2005-03-30 大規模蛋白質相互作用データの効率的視覚化技法

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JP2004118819A true JP2004118819A (ja) 2004-04-15

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JP2002319839A Pending JP2004118819A (ja) 2002-09-23 2002-11-01 大規模蛋白質相互作用データの効率的視覚化技法
JP2005099514A Pending JP2005322216A (ja) 2002-09-23 2005-03-30 大規模蛋白質相互作用データの効率的視覚化技法

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Country Status (3)

Country Link
US (1) US7280921B2 (enExample)
JP (2) JP2004118819A (enExample)
KR (1) KR100470977B1 (enExample)

Families Citing this family (15)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2004069417A (ja) * 2002-08-05 2004-03-04 Hitachi Ltd ノード座標の決定方法、ネットワーク表示方法及びスクリーニング方法
KR100491666B1 (ko) * 2002-09-23 2005-05-27 학교법인 인하학원 단백질 상호작용 네트웍의 분할 시각화 기법
EP1510939A1 (en) * 2003-08-29 2005-03-02 Sap Ag A method of providing a visualisation graph on a computer and a computer for providing a visualisation graph
EP1510940A1 (en) * 2003-08-29 2005-03-02 Sap Ag A method of providing a visualisation graph on a computer and a computer for providing a visualisation graph
EP1510938B1 (en) * 2003-08-29 2014-06-18 Sap Ag A method of providing a visualisation graph on a computer and a computer for providing a visualisation graph
EP1510941A1 (en) * 2003-08-29 2005-03-02 Sap Ag A method of providing a visualisation graph on a computer and a computer for providing a visualisation graph
US7523117B2 (en) * 2005-05-04 2009-04-21 West Virginia University Research Corporation Method for data clustering and classification by a graph theory model—network partition into high density subgraphs
KR100833988B1 (ko) * 2006-10-12 2008-05-30 포항공과대학교 산학협력단 다극자 변형 표현을 이용한 단백질 분자 모양의 표현 방법
KR100970968B1 (ko) * 2008-10-21 2010-07-21 건국대학교 산학협력단 거대 분자의 렌더링 방법 및 장치
US10289802B2 (en) 2010-12-27 2019-05-14 The Board Of Trustees Of The Leland Stanford Junior University Spanning-tree progression analysis of density-normalized events (SPADE)
CN102750460B (zh) * 2012-05-31 2014-12-10 常州工学院 分层简化大规模图数据的运算方法
CN103390087B (zh) * 2013-07-31 2016-03-09 浙江大学 一种针对大规模几何场景的交互绘制方法
WO2015084461A2 (en) * 2013-09-23 2015-06-11 Northeastern University System and methods for disease module detection
JP7404648B2 (ja) * 2019-04-25 2023-12-26 富士通株式会社 治療薬提示方法、治療薬提示装置、及び治療薬提示プログラム
CN111061921B (zh) * 2019-12-04 2020-10-30 智器云南京信息科技有限公司 一种图像布局实现方法、系统、终端设备和存储介质

Family Cites Families (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5265030A (en) * 1990-04-24 1993-11-23 Scripps Clinic And Research Foundation System and method for determining three-dimensional structures of proteins
WO1993020525A1 (fr) * 1992-03-27 1993-10-14 Akiko Itai Procede d'analyse de la structure d'un composite stable de biopolymere et de molecules de coordination
JPH08263535A (ja) * 1995-03-23 1996-10-11 Fujitsu Ltd 立体構造データ管理方法
US20020107643A1 (en) * 1999-01-22 2002-08-08 Wayne A. Hendrickson Process for pan-genomic determination of macromolecular atomic structures

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Publication number Publication date
US20040059521A1 (en) 2004-03-25
US7280921B2 (en) 2007-10-09
JP2005322216A (ja) 2005-11-17
KR100470977B1 (ko) 2005-03-10
KR20040026227A (ko) 2004-03-30

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