JP2003520578A - 環境サンプルからの核酸の入手方法、得られた核酸、および新規化合物の合成における用途 - Google Patents

環境サンプルからの核酸の入手方法、得られた核酸、および新規化合物の合成における用途

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Publication number
JP2003520578A
JP2003520578A JP2001542561A JP2001542561A JP2003520578A JP 2003520578 A JP2003520578 A JP 2003520578A JP 2001542561 A JP2001542561 A JP 2001542561A JP 2001542561 A JP2001542561 A JP 2001542561A JP 2003520578 A JP2003520578 A JP 2003520578A
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JP
Japan
Prior art keywords
vector
nucleic acid
dna
soil
population
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Application number
JP2001542561A
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English (en)
Japanese (ja)
Inventor
ジヤナン，パスカル
ペルノデ，ジヤン−リユク
グリノー，ミシエル
シモネ，パスカル
クルトワ，ソフイー
カペラノ，カルムラ
フランク，フランソワ
レナル，アラン
バル，マリア
スゾノ，グナデイ
テユフイル，カリーヌ
フロステガード，アサ
Original Assignee
アバンテイス・フアルマ・エス・アー
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Priority claimed from FR9915032A external-priority patent/FR2801609B1/fr
Application filed by アバンテイス・フアルマ・エス・アー filed Critical アバンテイス・フアルマ・エス・アー
Publication of JP2003520578A publication Critical patent/JP2003520578A/ja
Withdrawn legal-status Critical Current

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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P19/00—Preparation of compounds containing saccharide radicals
    • C12P19/26—Preparation of nitrogen-containing carbohydrates
    • C12P19/28—N-glycosides
    • C12P19/30—Nucleotides
    • C12P19/34—Polynucleotides, e.g. nucleic acids, oligoribonucleotides
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/93—Ligases (6)
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/04—Antibacterial agents
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P33/00—Antiparasitic agents
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P33/00—Antiparasitic agents
    • A61P33/02—Antiprotozoals, e.g. for leishmaniasis, trichomoniasis, toxoplasmosis
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00—Antineoplastic agents
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P37/00—Drugs for immunological or allergic disorders
    • A61P37/02—Immunomodulators
    • A61P37/06—Immunosuppressants, e.g. drugs for graft rejection
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1003—Extracting or separating nucleic acids from biological samples, e.g. pure separation or isolation methods; Conditions, buffers or apparatuses therefor

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  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Veterinary Medicine (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Medicinal Chemistry (AREA)
  • General Chemical & Material Sciences (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Wood Science & Technology (AREA)
  • Genetics & Genomics (AREA)
  • Zoology (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
  • Pharmacology & Pharmacy (AREA)
  • Animal Behavior & Ethology (AREA)
  • Public Health (AREA)
  • Molecular Biology (AREA)
  • Biomedical Technology (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Biochemistry (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Tropical Medicine & Parasitology (AREA)
  • Analytical Chemistry (AREA)
  • Plant Pathology (AREA)
  • Oncology (AREA)
  • Transplantation (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Biophysics (AREA)
  • Communicable Diseases (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Enzymes And Modification Thereof (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)
  • Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
  • Medicines Containing Material From Animals Or Micro-Organisms (AREA)
JP2001542561A 1999-11-29 2000-11-27 環境サンプルからの核酸の入手方法、得られた核酸、および新規化合物の合成における用途 Withdrawn JP2003520578A (ja)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
FR99/15032 1999-11-29
FR9915032A FR2801609B1 (fr) 1999-11-29 1999-11-29 Procede d'obtention d'acides nucleiques a partir d'un echantillon de l'environnement, acides nucleiques ainsi obtenus et leur application a la synthese de nouveaux composes
US20980000P 2000-06-07 2000-06-07
US60/209,800 2000-06-07
PCT/FR2000/003311 WO2001040497A2 (fr) 1999-11-29 2000-11-27 Procede d'obtention d'acides nucleiques a partir d'un echantillon de l'environnement

Publications (1)

Publication Number Publication Date
JP2003520578A true JP2003520578A (ja) 2003-07-08

Family

ID=26235170

Family Applications (1)

Application Number Title Priority Date Filing Date
JP2001542561A Withdrawn JP2003520578A (ja) 1999-11-29 2000-11-27 環境サンプルからの核酸の入手方法、得られた核酸、および新規化合物の合成における用途

Country Status (9)

Country Link
EP (1) EP1268764A2 (fr)
JP (1) JP2003520578A (fr)
KR (1) KR20020060242A (fr)
AU (2) AU781961B2 (fr)
BR (1) BR0015993A (fr)
CA (1) CA2393041A1 (fr)
IL (1) IL149846A0 (fr)
NO (1) NO20022532L (fr)
WO (1) WO2001040497A2 (fr)

Cited By (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JPWO2005073377A1 (ja) * 2004-01-28 2008-01-10 株式会社東京大学Ｔｌｏ 環境サンプルからのｄｎａの回収方法
JPWO2005121336A1 (ja) * 2004-06-08 2008-04-10 東亞合成株式会社 環境ｄｎａの精製方法及び環境ｄｎａからのタンパク質をコードする遺伝子の効率的なスクリーニング方法
JP2013511269A (ja) * 2009-11-19 2013-04-04 キアゲン ゲーエムベーハー 微生物核酸および必要に応じて追加のウイルス核酸を選択的に富化し単離するための方法

Families Citing this family (37)

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US20010047029A1 (en) * 2000-04-26 2001-11-29 Handelsman Jo E. Triaryl cation antibiotics from environmental DNA
US20040121311A1 (en) 2002-12-06 2004-06-24 Ecker David J. Methods for rapid detection and identification of bioagents in livestock
US7226739B2 (en) 2001-03-02 2007-06-05 Isis Pharmaceuticals, Inc Methods for rapid detection and identification of bioagents in epidemiological and forensic investigations
US7666588B2 (en) 2001-03-02 2010-02-23 Ibis Biosciences, Inc. Methods for rapid forensic analysis of mitochondrial DNA and characterization of mitochondrial DNA heteroplasmy
US20030027135A1 (en) 2001-03-02 2003-02-06 Ecker David J. Method for rapid detection and identification of bioagents
US8073627B2 (en) 2001-06-26 2011-12-06 Ibis Biosciences, Inc. System for indentification of pathogens
US7217510B2 (en) 2001-06-26 2007-05-15 Isis Pharmaceuticals, Inc. Methods for providing bacterial bioagent characterizing information
FR2834997B1 (fr) * 2002-01-21 2004-03-19 Evialis Procede de detection de champignons producteurs d'ochratoxine a ou de citrinine
EP1386966A1 (fr) 2002-07-24 2004-02-04 Libragen Méthode pour l'expresssion de l'ADN environmental dans des cellules hôtes
AU2003264077C1 (en) 2002-08-20 2009-06-11 B.R.A.I.N. Biotechnology Research And Information Network Ag Isolation and cloning of DNA from uncultivated organisms
EP1905833B1 (fr) 2002-10-08 2015-08-12 Aventis Pharma S.A. Polypeptides impliqués dans la biosynthèse des spiramycines, séquences nucléotidiques codant ces polypeptides et leurs applications
CA2508726A1 (fr) 2002-12-06 2004-07-22 Isis Pharmaceuticals, Inc. Procedes d'identification rapide de pathogenes chez l'homme et les betes
US8057993B2 (en) 2003-04-26 2011-11-15 Ibis Biosciences, Inc. Methods for identification of coronaviruses
US7964343B2 (en) 2003-05-13 2011-06-21 Ibis Biosciences, Inc. Method for rapid purification of nucleic acids for subsequent analysis by mass spectrometry by solution capture
US8158354B2 (en) 2003-05-13 2012-04-17 Ibis Biosciences, Inc. Methods for rapid purification of nucleic acids for subsequent analysis by mass spectrometry by solution capture
US20120122102A1 (en) 2003-09-11 2012-05-17 Rangarajan Sampath Compositions for use in identification of bacteria
US8097416B2 (en) 2003-09-11 2012-01-17 Ibis Biosciences, Inc. Methods for identification of sepsis-causing bacteria
US8546082B2 (en) 2003-09-11 2013-10-01 Ibis Biosciences, Inc. Methods for identification of sepsis-causing bacteria
US7666592B2 (en) 2004-02-18 2010-02-23 Ibis Biosciences, Inc. Methods for concurrent identification and quantification of an unknown bioagent
US7714275B2 (en) 2004-05-24 2010-05-11 Ibis Biosciences, Inc. Mass spectrometry with selective ion filtration by digital thresholding
US20050266411A1 (en) 2004-05-25 2005-12-01 Hofstadler Steven A Methods for rapid forensic analysis of mitochondrial DNA
US7811753B2 (en) 2004-07-14 2010-10-12 Ibis Biosciences, Inc. Methods for repairing degraded DNA
WO2006135400A2 (fr) 2004-08-24 2006-12-21 Isis Pharmaceuticals, Inc. Procedes pour l'identification rapide d'organismes recombinants
EP1869180B1 (fr) 2005-03-03 2013-02-20 Ibis Biosciences, Inc. Compositions utilisées pour identifier des virus polyoma
US8084207B2 (en) 2005-03-03 2011-12-27 Ibis Bioscience, Inc. Compositions for use in identification of papillomavirus
JP2009502137A (ja) 2005-07-21 2009-01-29 アイシス ファーマシューティカルズ インコーポレイティッド 核酸変種の迅速な同定および定量のための方法
US9149473B2 (en) 2006-09-14 2015-10-06 Ibis Biosciences, Inc. Targeted whole genome amplification method for identification of pathogens
WO2008104002A2 (fr) 2007-02-23 2008-08-28 Ibis Biosciences, Inc. Procédé d'analyse d'adn médico-légale rapide
US9598724B2 (en) 2007-06-01 2017-03-21 Ibis Biosciences, Inc. Methods and compositions for multiple displacement amplification of nucleic acids
WO2010033627A2 (fr) 2008-09-16 2010-03-25 Ibis Biosciences, Inc. Unités de traitement d'échantillons, systèmes et procédés associés
WO2010033625A1 (fr) 2008-09-16 2010-03-25 Ibis Biosciences, Inc. Systèmes de manipulation de microplaques et produits-programmes informatiques et procédés connexes
US8550694B2 (en) 2008-09-16 2013-10-08 Ibis Biosciences, Inc. Mixing cartridges, mixing stations, and related kits, systems, and methods
EP2358908B1 (fr) 2008-11-14 2014-01-08 Gen-Probe Incorporated Compositions et procédés pour la détection d'acide nucléique de campylobacter
EP2396803A4 (fr) 2009-02-12 2016-10-26 Ibis Biosciences Inc Ensembles sonde d'ionisation
US8950604B2 (en) 2009-07-17 2015-02-10 Ibis Biosciences, Inc. Lift and mount apparatus
WO2011008972A1 (fr) 2009-07-17 2011-01-20 Ibis Biosciences, Inc. Systèmes pour l'identification d'un bioagent
ES2628739T3 (es) 2009-10-15 2017-08-03 Ibis Biosciences, Inc. Amplificación por desplazamiento múltiple

Family Cites Families (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4900677A (en) * 1986-09-26 1990-02-13 E. I. Du Pont De Nemours And Company Process for rapid isolation of high molecular weight DNA
KR20040041639A (ko) * 1995-04-24 2004-05-17 크로막솜 코포레이티드 새로운 대사 경로를 만들고 이를 스크리닝하는 방법
US6261842B1 (en) * 1997-10-23 2001-07-17 Wisconsin Alumni Research Foundation Microorganism genomics, compositions and methods related thereto
CA2330543A1 (fr) * 1998-06-23 1999-12-29 Biosearch Italia S.P.A. Procedes de transfert de la capacite de production d'un produit naturel dans un hote de production approprie

Cited By (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JPWO2005073377A1 (ja) * 2004-01-28 2008-01-10 株式会社東京大学Ｔｌｏ 環境サンプルからのｄｎａの回収方法
JP2011045386A (ja) * 2004-01-28 2011-03-10 Toudai Tlo Ltd 環境サンプルからのｄｎａの回収方法
JP4665124B2 (ja) * 2004-01-28 2011-04-06 株式会社東京大学Ｔｌｏ 環境サンプルからのｄｎａの回収方法
JP2013135681A (ja) * 2004-01-28 2013-07-11 Toudai Tlo Ltd 環境サンプルからのｄｎａの回収方法
JPWO2005121336A1 (ja) * 2004-06-08 2008-04-10 東亞合成株式会社 環境ｄｎａの精製方法及び環境ｄｎａからのタンパク質をコードする遺伝子の効率的なスクリーニング方法
JP2013511269A (ja) * 2009-11-19 2013-04-04 キアゲン ゲーエムベーハー 微生物核酸および必要に応じて追加のウイルス核酸を選択的に富化し単離するための方法

Also Published As

Publication number Publication date
AU781961B2 (en) 2005-06-23
IL149846A0 (en) 2002-11-10
WO2001040497A2 (fr) 2001-06-07
CA2393041A1 (fr) 2001-06-07
BR0015993A (pt) 2002-08-06
EP1268764A2 (fr) 2003-01-02
KR20020060242A (ko) 2002-07-16
NO20022532L (no) 2002-06-26
NO20022532D0 (no) 2002-05-28
WO2001040497A3 (fr) 2002-10-17
AU2005211587A1 (en) 2005-10-13
AU2179101A (en) 2001-06-12

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