IN2014DN05963A - - Google Patents

Info

Publication number
IN2014DN05963A
IN2014DN05963A IN5963DEN2014A IN2014DN05963A IN 2014DN05963 A IN2014DN05963 A IN 2014DN05963A IN 5963DEN2014 A IN5963DEN2014 A IN 5963DEN2014A IN 2014DN05963 A IN2014DN05963 A IN 2014DN05963A
Authority
IN
India
Prior art keywords
genome
insertion sites
sequence
data
analysis
Prior art date
Application number
Other languages
English (en)
Inventor
Dent Lakshmi Sastry
Shreedharan Sriram
Navin Elango
Zehui Cao
Karthik Narayan Muthuranman
Original Assignee
Dow Agrosciences Llc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Dow Agrosciences Llc filed Critical Dow Agrosciences Llc
Publication of IN2014DN05963A publication Critical patent/IN2014DN05963A/en

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G16B50/10—Ontologies; Annotations

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Theoretical Computer Science (AREA)
  • Evolutionary Biology (AREA)
  • Biophysics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biotechnology (AREA)
  • Medical Informatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Chemical & Material Sciences (AREA)
  • Bioethics (AREA)
  • Databases & Information Systems (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)
IN5963DEN2014 2012-02-08 2013-02-07 IN2014DN05963A (enrdf_load_stackoverflow)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201261596540P 2012-02-08 2012-02-08
US201261601090P 2012-02-21 2012-02-21
PCT/US2013/025087 WO2013119770A1 (en) 2012-02-08 2013-02-07 Data analysis of dna sequences

Publications (1)

Publication Number Publication Date
IN2014DN05963A true IN2014DN05963A (enrdf_load_stackoverflow) 2015-06-26

Family

ID=48946332

Family Applications (1)

Application Number Title Priority Date Filing Date
IN5963DEN2014 IN2014DN05963A (enrdf_load_stackoverflow) 2012-02-08 2013-02-07

Country Status (13)

Country Link
US (1) US20130211729A1 (enrdf_load_stackoverflow)
EP (1) EP2812831A4 (enrdf_load_stackoverflow)
JP (1) JP6314091B2 (enrdf_load_stackoverflow)
KR (1) KR20140119723A (enrdf_load_stackoverflow)
CN (1) CN104272311B (enrdf_load_stackoverflow)
AR (1) AR089934A1 (enrdf_load_stackoverflow)
AU (1) AU2013217079B2 (enrdf_load_stackoverflow)
BR (1) BR112014019047A2 (enrdf_load_stackoverflow)
CA (1) CA2863524A1 (enrdf_load_stackoverflow)
IL (1) IL233819A0 (enrdf_load_stackoverflow)
IN (1) IN2014DN05963A (enrdf_load_stackoverflow)
TW (1) TWI596493B (enrdf_load_stackoverflow)
WO (1) WO2013119770A1 (enrdf_load_stackoverflow)

Families Citing this family (26)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
TW201518504A (zh) 2013-11-04 2015-05-16 Dow Agrosciences Llc 最適玉米基因座（一）
CA3226233A1 (en) 2013-11-04 2015-05-07 Corteva Agriscience Llc Optimal soybean loci for targeted transgene integration
AU2014341927B2 (en) 2013-11-04 2017-12-14 Corteva Agriscience Llc Optimal maize loci
AU2014341925B2 (en) 2013-11-04 2017-06-29 Corteva Agriscience Llc Optimal soybean loci
CN103824001A (zh) * 2014-02-27 2014-05-28 北京诺禾致源生物信息科技有限公司 染色体的检测方法和装置
US9600599B2 (en) * 2014-05-13 2017-03-21 Spiral Genetics, Inc. Prefix burrows-wheeler transformation with fast operations on compressed data
TWI571763B (zh) * 2014-12-01 2017-02-21 財團法人資訊工業策進會 次世代定序分析系統及其次世代定序分析方法
WO2016100049A1 (en) 2014-12-18 2016-06-23 Edico Genome Corporation Chemically-sensitive field effect transistor
US10020300B2 (en) 2014-12-18 2018-07-10 Agilome, Inc. Graphene FET devices, systems, and methods of using the same for sequencing nucleic acids
US9618474B2 (en) 2014-12-18 2017-04-11 Edico Genome, Inc. Graphene FET devices, systems, and methods of using the same for sequencing nucleic acids
US9859394B2 (en) 2014-12-18 2018-01-02 Agilome, Inc. Graphene FET devices, systems, and methods of using the same for sequencing nucleic acids
US10006910B2 (en) 2014-12-18 2018-06-26 Agilome, Inc. Chemically-sensitive field effect transistors, systems, and methods for manufacturing and using the same
US9857328B2 (en) 2014-12-18 2018-01-02 Agilome, Inc. Chemically-sensitive field effect transistors, systems and methods for manufacturing and using the same
CN107408162B (zh) * 2015-06-24 2020-12-01 吉尼努斯公司 用于分析基因的方法及装置
CN108292328B (zh) * 2015-11-10 2022-04-19 美国陶氏益农公司 用于预测转基因沉默风险的方法和系统
TWI582631B (zh) * 2015-11-20 2017-05-11 財團法人資訊工業策進會 用以分析細菌菌種之定序資料的系統及其方法
WO2017101112A1 (zh) * 2015-12-18 2017-06-22 云舟生物科技（广州）有限公司 载体设计方法及载体设计装置
WO2017201081A1 (en) 2016-05-16 2017-11-23 Agilome, Inc. Graphene fet devices, systems, and methods of using the same for sequencing nucleic acids
TWI629607B (zh) * 2017-08-15 2018-07-11 極諾生技股份有限公司 建立腸道菌數據庫的方法和相關檢測系統
US10649982B2 (en) 2017-11-09 2020-05-12 Fry Laboratories, LLC Automated database updating and curation
US20230030373A1 (en) * 2019-12-23 2023-02-02 Cold Spring Harbor Laboratory Mixseq: mixture sequencing using compressed sensing for in-situ and in-vitro applications
KR102322308B1 (ko) 2020-03-27 2021-11-05 주식회사 클리노믹스 일부 오믹스 정보를 활용하여 전체 오믹스 정보로 확대 생산하는 장치 및 방법
CN111613272B (zh) * 2020-05-21 2023-10-13 西湖大学 程序化框架gRNA及其应用
CN113724783B (zh) * 2021-06-16 2022-04-12 北京阅微基因技术股份有限公司 一种短串联重复序列重复数的检测和分型方法
US12112792B2 (en) * 2021-08-10 2024-10-08 Micron Technology, Inc. Memory device for wafer-on-wafer formed memory and logic
CN116343923B (zh) * 2023-03-21 2023-12-08 哈尔滨工业大学 一种基因组结构变异同源性识别方法

Family Cites Families (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20030204317A1 (en) * 2002-04-26 2003-10-30 Affymetrix, Inc. Methods, systems and software for displaying genomic sequence and annotations
JP2004139254A (ja) * 2002-10-16 2004-05-13 Nec Soft Ltd 近傍遺伝子情報検索装置及び方法
US20040241657A1 (en) * 2003-05-28 2004-12-02 Perlegen Sciences, Inc. Liver related disease compositions and methods
GB2413796B (en) * 2004-03-25 2006-03-29 Global Genomics Ab Methods and means for nucleic acid sequencing
NZ554035A (en) * 2004-09-29 2009-11-27 Pioneer Hi Bred Int Corn event DAS-59122-7 and methods for detection thereof
JP2006252541A (ja) * 2005-02-10 2006-09-21 Institute Of Physical & Chemical Research アノテーション方法、アノテーションシステム、プログラムおよびコンピューター読み取り可能な記録媒体
US8592211B2 (en) * 2009-03-20 2013-11-26 The Rockefeller University Enhanced PiggyBac transposon and methods for transposon mutagenesis
WO2010109463A2 (en) * 2009-03-24 2010-09-30 Yeda Research And Development Co. Ltd. Methods of predicting pairability and secondary structures of rna molecules

Also Published As

Publication number Publication date
AU2013217079B2 (en) 2018-04-19
WO2013119770A1 (en) 2013-08-15
EP2812831A1 (en) 2014-12-17
HK1201951A1 (en) 2015-09-11
CN104272311A (zh) 2015-01-07
CA2863524A1 (en) 2013-08-15
CN104272311B (zh) 2018-08-28
TW201337618A (zh) 2013-09-16
KR20140119723A (ko) 2014-10-10
IL233819A0 (en) 2014-09-30
JP2015509623A (ja) 2015-03-30
AR089934A1 (es) 2014-10-01
BR112014019047A2 (pt) 2017-06-27
JP6314091B2 (ja) 2018-04-18
US20130211729A1 (en) 2013-08-15
EP2812831A4 (en) 2015-11-18
AU2013217079A1 (en) 2014-08-07
TWI596493B (zh) 2017-08-21

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