DE602004020220D1 - Mittel und verfahren zum nachweis von zielnukleotidsequenzen unter verwendung von ligationstests mit verbesserten oligonukleotidsondenpaaren - Google Patents

Mittel und verfahren zum nachweis von zielnukleotidsequenzen unter verwendung von ligationstests mit verbesserten oligonukleotidsondenpaaren

Info

Publication number
DE602004020220D1
DE602004020220D1 DE602004020220T DE602004020220T DE602004020220D1 DE 602004020220 D1 DE602004020220 D1 DE 602004020220D1 DE 602004020220 T DE602004020220 T DE 602004020220T DE 602004020220 T DE602004020220 T DE 602004020220T DE 602004020220 D1 DE602004020220 D1 DE 602004020220D1
Authority
DE
Germany
Prior art keywords
donut
pairs
nucleotide sequences
target nucleotide
detecting target
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Expired - Lifetime
Application number
DE602004020220T
Other languages
English (en)
Inventor
Eijk Michael Josephus Van
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Keygene NV
Original Assignee
Keygene NV
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Keygene NV filed Critical Keygene NV
Publication of DE602004020220D1 publication Critical patent/DE602004020220D1/de
Anticipated expiration legal-status Critical
Expired - Lifetime legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/6862—Ligase chain reaction [LCR]
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y10—TECHNICAL SUBJECTS COVERED BY FORMER USPC
    • Y10S—TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y10S435/00—Chemistry: molecular biology and microbiology
    • Y10S435/81—Packaged device or kit

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Biotechnology (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
DE602004020220T 2003-06-17 2004-06-16 Mittel und verfahren zum nachweis von zielnukleotidsequenzen unter verwendung von ligationstests mit verbesserten oligonukleotidsondenpaaren Expired - Lifetime DE602004020220D1 (de)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
NL0300444 2003-06-17
PCT/NL2004/000428 WO2004111271A2 (en) 2003-06-17 2004-06-16 Means and method for the detection of target nucleotide sequences using ligation assays with improved oligonucleotide probe pairs

Publications (1)

Publication Number Publication Date
DE602004020220D1 true DE602004020220D1 (de) 2009-05-07

Family

ID=33550368

Family Applications (1)

Application Number Title Priority Date Filing Date
DE602004020220T Expired - Lifetime DE602004020220D1 (de) 2003-06-17 2004-06-16 Mittel und verfahren zum nachweis von zielnukleotidsequenzen unter verwendung von ligationstests mit verbesserten oligonukleotidsondenpaaren

Country Status (12)

Country Link
US (1) US7846657B2 (de)
EP (1) EP1633888B1 (de)
JP (1) JP4732339B2 (de)
AT (1) ATE426681T1 (de)
AU (1) AU2004248074B2 (de)
CA (1) CA2529366A1 (de)
DE (1) DE602004020220D1 (de)
DK (1) DK1633888T3 (de)
ES (1) ES2322904T3 (de)
PL (1) PL1633888T3 (de)
PT (1) PT1633888E (de)
WO (1) WO2004111271A2 (de)

Families Citing this family (29)

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Publication number Priority date Publication date Assignee Title
EP1319718A1 (de) * 2001-12-14 2003-06-18 Keygene N.V. Hochdurchsatzanalyse und Detektion von mehreren Zielsequenzen
US7785843B2 (en) * 2004-06-23 2010-08-31 Sequenom, Inc. Target-specific compomers and methods of use
KR20070083924A (ko) * 2004-11-19 2007-08-24 와쿠나가 세이야쿠 가부시키 가이샤 핵산 검출용 핵산 단편 및 핵산 검출방법
MX2012014917A (es) * 2010-06-22 2013-03-18 Univ Hawaii Monitoreo en tiempo real, especifico de secuencia de la amplificacion isotermica mediada por asa (lamp).
JP2012050393A (ja) * 2010-09-02 2012-03-15 Sony Corp 核酸等温増幅方法
US9184099B2 (en) 2010-10-04 2015-11-10 The Board Of Trustees Of The Leland Stanford Junior University Biosensor devices, systems and methods therefor
SG189839A1 (en) 2010-10-04 2013-06-28 Genapsys Inc Systems and methods for automated reusable parallel biological reactions
US9399217B2 (en) 2010-10-04 2016-07-26 Genapsys, Inc. Chamber free nanoreactor system
US8585973B2 (en) 2011-05-27 2013-11-19 The Board Of Trustees Of The Leland Stanford Junior University Nano-sensor array
EP2714935B1 (de) * 2011-05-27 2017-03-15 Genapsys Inc. Systeme und verfahren für genetische und biologische analysen
US9926596B2 (en) 2011-05-27 2018-03-27 Genapsys, Inc. Systems and methods for genetic and biological analysis
EP2729580B1 (de) 2011-07-08 2015-09-16 Keygene N.V. Sequenzbasierte genotypisierung auf grundlage von oligonukleotid-verknüpfungsassays
EP2785868B1 (de) 2011-12-01 2017-04-12 Genapsys Inc. Systeme und verfahren für hocheffiziente elektronische sequenzierung und nachweis
WO2013106807A1 (en) * 2012-01-13 2013-07-18 Curry John D Scalable characterization of nucleic acids by parallel sequencing
WO2013123220A1 (en) * 2012-02-14 2013-08-22 Cornell University Method for relative quantification of nucleic acid sequence, expression, or copy changes, using combined nuclease, ligation, and polymerase reactions
WO2014152625A1 (en) 2013-03-15 2014-09-25 Genapsys, Inc. Systems and methods for biological analysis
WO2015089238A1 (en) 2013-12-11 2015-06-18 Genapsys, Inc. Systems and methods for biological analysis and computation
EP3126523B1 (de) 2014-04-01 2020-02-19 Cornell University Nachweis von dna-methylierung unter verwendung kombinierter nukleaseligationsreaktionen
WO2015161054A2 (en) 2014-04-18 2015-10-22 Genapsys, Inc. Methods and systems for nucleic acid amplification
US9856521B2 (en) * 2015-01-27 2018-01-02 BioSpyder Technologies, Inc. Ligation assays in liquid phase
US10683534B2 (en) 2015-01-27 2020-06-16 BioSpyder Technologies, Inc. Ligation assays in liquid phase
US11091810B2 (en) * 2015-01-27 2021-08-17 BioSpyder Technologies, Inc. Focal gene expression profiling of stained FFPE tissues with spatial correlation to morphology
CN104450697B (zh) * 2014-12-02 2017-01-11 中国科学院海洋研究所 一种与牡蛎抗病毒特性相关的snp标记及其应用
US11118216B2 (en) 2015-09-08 2021-09-14 Affymetrix, Inc. Nucleic acid analysis by joining barcoded polynucleotide probes
CN116397014A (zh) 2016-07-20 2023-07-07 测序健康公司 用于核酸测序的系统和方法
CN111566224A (zh) 2017-09-21 2020-08-21 吉纳普赛斯股份有限公司 用于核酸测序的系统和方法
AU2019287163A1 (en) 2018-06-12 2020-12-03 Keygene N.V. Nucleic acid amplification method
WO2020169830A1 (en) 2019-02-21 2020-08-27 Keygene N.V. Genotyping of polyploids
CN113748217B (zh) * 2019-03-01 2023-08-25 仁慈生物分析公司 用于靶实体检测的系统、组合物和方法

Family Cites Families (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5424413A (en) * 1992-01-22 1995-06-13 Gen-Probe Incorporated Branched nucleic acid probes
US5473060A (en) * 1993-07-02 1995-12-05 Lynx Therapeutics, Inc. Oligonucleotide clamps having diagnostic applications
US5942391A (en) * 1994-06-22 1999-08-24 Mount Sinai School Of Medicine Nucleic acid amplification method: ramification-extension amplification method (RAM)
US5876924A (en) * 1994-06-22 1999-03-02 Mount Sinai School Of Medicine Nucleic acid amplification method hybridization signal amplification method (HSAM)
WO1996015271A1 (en) * 1994-11-16 1996-05-23 Abbott Laboratories Multiplex ligations-dependent amplification
EP1130113A1 (de) * 2000-02-15 2001-09-05 Johannes Petrus Schouten Amplifizierungsassay abhängig von multiplex Ligation
JP4310599B2 (ja) * 2000-07-05 2009-08-12 東洋紡績株式会社 塩基多型を検出する方法
WO2004106547A2 (en) * 2003-06-02 2004-12-09 Check-Points Bv Fast method for detecting micro-organisms in food samples

Also Published As

Publication number Publication date
ATE426681T1 (de) 2009-04-15
EP1633888B1 (de) 2009-03-25
JP2006527597A (ja) 2006-12-07
JP4732339B2 (ja) 2011-07-27
PT1633888E (pt) 2009-04-22
PL1633888T3 (pl) 2009-10-30
US7846657B2 (en) 2010-12-07
CA2529366A1 (en) 2004-12-23
ES2322904T3 (es) 2009-07-01
US20070275375A1 (en) 2007-11-29
DK1633888T3 (da) 2009-07-13
WO2004111271A2 (en) 2004-12-23
AU2004248074A1 (en) 2004-12-23
EP1633888A2 (de) 2006-03-15
WO2004111271A3 (en) 2005-03-17
AU2004248074B2 (en) 2008-10-23

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