CN113801857A - 一种酶活提高的NADH脱氢酶突变体SlNOX及其应用 - Google Patents

一种酶活提高的NADH脱氢酶突变体SlNOX及其应用 Download PDF

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CN113801857A
CN113801857A CN202111354240.8A CN202111354240A CN113801857A CN 113801857 A CN113801857 A CN 113801857A CN 202111354240 A CN202111354240 A CN 202111354240A CN 113801857 A CN113801857 A CN 113801857A
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肖璐
段学武
陈少格
蒋跃明
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Abstract

本发明公开了一种酶活提高的NADH脱氢酶突变体SlNOX及其应用。NADH脱氢酶的突变体SlNOXR161A,其氨基酸序列如SEQ ID NO.3所示。本发明提供了一种NADH脱氢酶的突变体SlNOXR161A,所述突变体SlNOXR161A的氨基酸序列如SEQ ID NO.3所示。本发明所述突变体SlNOXR161A是对序列如SEQ ID NO.2所示的氨基酸序列进行定点突变,将第161位的Arg突变成Ala,从而提高NADH脱氢酶的活性,使NADH脱氢酶的酶活提高了36%。本发明所得到的NADH脱氢酶突变体SlNOXR161A可以作为一种可以显著提高酶催化活力的突变体材料为NOX的进一步研究提供参考。

Description

一种酶活提高的NADH脱氢酶突变体SlNOX及其应用
技术领域
本发明属于生物技术领域,具体涉及一种酶活提高的NADH脱氢酶突变体SlNOX及其应用。
背景技术
线粒体呼吸链膜蛋白复合物I(complex I),又称为NADH脱氢酶,是线粒体呼吸链电子传递系统的主要入口,在绝大多数真核生物中是一个很复杂的线粒体电子呼吸链元件,在糖酵解、糖异生、三羧酸循环以及呼吸链中发挥着不可替代的作用。其中间产物通过脱氢,使NAD+还原为NADH,经电子传递氧化磷酸化反应产生大量ATP,该反应作为电子传递链的第一步,对能量代谢起着至关重要的作用。在叶绿体中,NADH脱氢酶通过叶绿体呼吸链参与活性氧代谢,响应氧化胁迫反应。由此可见,NADH脱氢酶在能量代谢和逆境胁迫中均发挥着重要的功能。
发明内容
本发明的第一个目的是提供NADH脱氢酶的突变体SlNOXR161A,其氨基酸序列如SEQID NO.3所示。
本发明的第二个目的是提供编码上述突变体SlNOXR161A的基因。
本发明的第三个目的是提供一种含有编码突变体SlNOXR161A的基因的重组表达质粒。
优选,所述的表达质粒是表达载体pET28a(+)。
本发明的第四个目的是提供一种含有上述重组表达质粒的宿主表达细胞。
优选,所述的宿主表达细胞是大肠杆菌。
本发明的第五个目的是突变体SlNOXR161A在催化NADH获得NAD+中的应用。
本发明的第六个目的是提供一种获得突变体SlNOXR161A的编码基因的方法,其包括以下步骤:
(1)以SlNOX基因为模板,以SEQ ID NO.4和SEQ ID NO.7所示序列为引物进行PCR,得第一PCR产物,所述的SlNOX基因的核苷酸序列如SEQ ID NO.1所示;
(2)以SlNOX基因为模板,以SEQ ID NO.5和SEQ ID NO.6所示序列为引物进行PCR,得第二PCR产物;
(3)以所述第一PCR产物和第二PCR产物为模板,以SEQ ID NO .4~5所示序列为引物进行PCR,得到含酶切位点的突变体SlNOXR161A的编码基因。
优选,所述的步骤(1)-(3)中的PCR程序为:98℃预变性3 min;98℃变性10s、60℃退火20 s、72℃延伸60 s,35个循环;72℃延伸5 min。
本发明提供了一种NADH脱氢酶的突变体SlNOXR161A,所述突变体SlNOXR161A的氨基酸序列如SEQ ID NO .3所示。本发明所述突变体SlNOXR161A是对序列如SEQ ID NO .2所示的氨基酸序列进行定点突变,将第161位的Arg突变成Ala,从而提高NADH脱氢酶的活性,使NADH脱氢酶的酶活提高了36%。本发明所得到的NADH脱氢酶突变体SlNOXR161A可以作为一种可以显著提高酶催化活力的突变体材料为NOX的进一步研究提供参考。
附图说明
图1是实施例中SlNOX-His及其突变体SlNOXR161A-His纯化蛋白SDS-PAGE;
图2是实施例中分光光度法测定酶活对比图(a和b表示两组酶活测定值有显著性差异,p<0.05)。
具体实施方式
以下实施例是对本发明的进一步说明,而不是对本发明的限制。
本发明的NADH脱氢酶的突变体SlNOXR161A的氨基酸序列如SEQ ID NO.3所示。本发明所述的突变体SlNOXR161A是将SlNOX氨基酸序列中第161位的Arg突变成Ala;所述SlNOX的氨基酸序列如SEQ ID NO.2所示。本发明突变的方法并没有具体限定,优选为点突变。本发明所述SlNOX来源于番茄,基因序列如SEQ ID NO.1所示,共690个碱基序列,基因编码的蛋白中含有229个氨基酸(如SEQ ID NO.2所示,蛋白大小为26.29kDa),在番茄基因组中对应的基因号是Solyc01g109620.3
下面详述本发明构建NADH脱氢酶的突变体SlNOXR161A的方法和活性试验。
实施例1
NADH脱氢酶的突变体SlNOXR161A的基因的构建是通过PCR方式获得,所述PCR用引物包括含酶切位点的引物对和含突变位点的引物对;所述的含酶切位点的引物对的序列如SEQ ID NO .4~5所示(酶切位点加粗且通过下横线标出);所述含突变位点的引物对的序列如SEQ ID NO.6~所示(突变位点加粗)。
1、样品:所选用的番茄品种是为AC(Solanum lycopersicum. Mill. cv. Ailsa-Craig)。
2、SlNOX基因的克隆
通过常规的热硼酸法对番茄果实中总RNA进行提取,将提取的总RNA按照试剂盒PrimeScriptTM RT Master Mix(Perfect Real Time,RR036A,TaKara)提供的方法将RNA反转录成cDNA,反应体系:X μL RNA(<500ng)、2 μL 5×Mix、Y μL RNase Free water混匀,使总体积为10 μL,然后放在37℃恒温水浴锅中水浴15 min,85℃金属浴热激5 s,4℃冷却即可。
根据番茄基因组(https://solgenomics.net/tools/blast)中SlNOX基因序列设计含nde I酶切位点的引物以及突变位点的引物,引物序列如表1所示;
表1克隆SlNOX R161A 基因所需引物
Figure 163002DEST_PATH_IMAGE001
以番茄cDNA为模板,先分别用含酶切位点的上游引物(SEQ ID NO.4)与含突变位点的下游引物(SEQ ID NO.7)进行PCR得到产物1,然后用含突变位点的上游引物(SEQ IDNO.6)与含酶切位点的下游引物(SEQ ID NO.5)进行PCR得到产物2,然后以产物1和产物2为模板,以含酶切位点的上、下游引物进行PCR得到含酶切位点的突变体SlNOX R161A 产物。
以番茄cDNA为模板,用含酶切位点的上游引物(SEQ ID NO.4)和下游引物((SEQID NO.5)进行PCR扩增获得SlNOX基因的扩增产物。
PCR条件为:98℃预变性3 min,然后进行35个循环(98℃变性10s、60℃退火20s、72℃延伸60s),72℃延伸5 min。PCR反应结束后,用1%琼脂糖凝胶电泳检测。
3、SlNOX表达菌株的构建
分别将SlNOX R161A 的PCR产物和SlNOX基因的扩增产物回收,与pET28a(+)载体连接构建重组表达质粒,连接选用的反应体系为In-fusion反应体系(TaKara):Purified RCRfragment,100 ng;Linearized vector:200 ng;5×In-Fusion HD Enzyme Premix,2μL,根据上述体积加Deionized water至10 μL。对应的负对照:Linearized vector:1μL;5×In-Fusion HD Enzyme Premix,2μl;Deionized water,7μL。pUC19阳性对照:Purified RCRfragment,2μL of 2kb control insert;Linearized vector:1μL of pUC19controlvector;5×InFusion HD Enzyme Premix,2μL;Deionized water:5μL。本发明所述连接的程序:将以上反应体系轻轻混匀后放置于50℃孵育15 min,然后置于冰上,即得连接产物,可进行下一步转化或将连接产物储存于-20℃备用。连接产物转化大肠杆菌DH5α感受态细胞,在700 μL LB培养基中培养1h (37℃,200 rpm),取400 μL菌液涂布于含0.05 mg/mL卡那霉素的固体LB平板,37℃过夜培养,挑取阳性菌落PCR鉴定,并将阳性菌液送广州擎科测序公司进行测序,将测序正确的质粒转化大肠杆菌BL21(DE3)感受态细胞,通过PCR鉴定阳性菌液按1:1加入50%灭菌甘油低温(-80℃)保存,分别得到SlNOX和SlNOXR161A表达菌株。
4、SlNOX-His和SlNOXR161A-His的原核表达和纯化
(1)原核表达
分别将SlNOX和SlNOXR161A表达菌株进行扩大培养(37℃,200 rpm),当菌液浓度达到OD600为0.4-0.6时,将菌液降温至15℃后加入终浓度为1 mM的蛋白诱导剂IPTG进行低温诱导(15℃,100 rpm),培养18-20 h后收集菌体。
(2)蛋白纯化
先加入无菌水将菌体悬浮,4℃ 6 000g离心10 min除去培养基,然后加入适量体积的蛋白提取液(20 mM Tris-HCl,500 mM NaCl,pH 7.5)将菌体悬浮,根据菌液体积按1:1000加入Triton-100以提高蛋白的提取效率。充分悬浮菌体后,利用低温超高压连续流细胞破碎机将菌体破碎1 h(超声30 s,停30 s),超声期间要将盛有菌液的容器要保持充分冰浴,以免超声过程中探头发热导致蛋白活性降低。超声破碎完毕后加入终浓度为1 mM的PMSF抑制蛋白降解。4℃ 9 000g离心30 min,将上清液过膜(0.45 μm),然后将已用蛋白提取液平衡好的Ni NTASuperflow Cartridges(QIAGEN)加入到蛋白溶液中,最后加入终浓度为10 mM的咪唑,于4℃低温使蛋白与填料旋转结合2 h以上。
先将静置后的蛋白上清液流过镍柱,最后将填料也一并转移到镍柱中,当上清液全部流过镍柱后,加入40 mM咪唑(含20 mM Tris-HCl,500 mM NaCl,pH 7.5)洗杂蛋白,直至流下的溶液用考马斯亮蓝G250(碧云天)检测无蛋白为止。然后用250 mM咪唑(含20 mMTris-HCl,500 mM NaCl,pH 7.5)洗脱目标蛋白。由于咪唑对蛋白活性有影响,因此要及时将收集的目标蛋白液用50 mM pH7的磷酸钾缓冲液通过Sephadex G-25脱盐柱(GE))离心(4℃,4 000 g)将蛋白中咪唑置换掉。最后将纯化后的目标蛋白保存在-80℃超低温冰箱,留取部分纯化好的蛋白与未纯化的蛋白进行跑胶检测,由此得到SlNOX-His及其突变体SlNOXR161A -His蛋白。SlNOX-His及其突变体SlNOXR161A-His蛋白的SDS-PAGE如附图1所示。
5.采用分光光度法对蛋白活性进行检测。选用苏州科铭生物技术有限公司的试剂盒测定SlNOX-His及其突变体SlNOXR161A-His的活性,具体的操作步骤见NADH氧化酶(NADHoxidase,NOX)试剂盒说明书(NOX-2-Y)。单位的定义:每mg蛋白在每mL反应体系中每分钟A600变化0.01定义为一个酶活力单位。蛋白活性的计算公式如下:
NOX(U/mg prot)=ΔA×V反总÷(V样×Cpr)÷0.01÷T=2500×ΔA÷Cpr
结果如图2所示,从图2可以看出突变体SlNOXR161A的活性显著高于SlNOX,使NADH脱氢酶的酶活提高了36%。
以上所述仅是本发明的优选实施方式,应当指出,对于本技术领域的普通技术人员来说,在不脱离本发明原理的前提下,还可以做出若干改进和润饰,这些改进和润饰也应视为本发明的保护范围。
序列表
<110> 中国科学院华南植物园
<120> 一种酶活提高的NADH脱氢酶突变体SlNOX及其应用
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Met Ala Ala Ile Leu Ala Arg Lys Ser Leu Ser Ala Leu Arg Ser Arg
1 5 10 15
Gln Leu Val Leu Ala Gly Gln Ala Trp Gln Gly Thr Asn Thr Pro Asn
20 25 30
Gly Thr Leu Leu Gly Thr Arg Ser Phe Ala Thr Lys His Ser Phe Ser
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Thr Asp Lys Asp Asp Glu Glu Arg Glu Gln Leu Ala Lys Glu Leu Ser
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Lys Asp Trp Asn Ser Val Phe Glu Arg Ser Ile Asn Thr Leu Phe Leu
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Thr Glu Met Val Arg Gly Leu Met Leu Thr Leu Lys Tyr Phe Phe Glu
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Lys Lys Val Thr Ile Asn Tyr Pro Phe Glu Lys Gly Pro Leu Ser Pro
100 105 110
Arg Phe Arg Gly Glu His Ala Leu Arg Arg Tyr Ala Thr Gly Glu Glu
115 120 125
Arg Cys Ile Ala Cys Lys Leu Cys Glu Ala Ile Cys Pro Ala Gln Ala
130 135 140
Ile Thr Ile Glu Ala Glu Glu Arg Glu Asp Gly Ser Arg Arg Thr Thr
145 150 155 160
Arg Tyr Asp Ile Asp Met Thr Lys Cys Ile Tyr Cys Gly Phe Cys Gln
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Glu Ala Cys Pro Val Asp Ala Ile Val Glu Gly Pro Asn Phe Glu Phe
180 185 190
Ala Thr Glu Thr His Glu Glu Leu Leu Tyr Asp Lys Glu Lys Leu Leu
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Glu Asn Gly Asp Arg Trp Glu Thr Glu Ile Ala Glu Asn Leu Arg Ser
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Glu Ser Leu Tyr Arg
225
<210> 3
<211> 229
<212> PRT
<213> 番茄(Solanum lycopersicum)
<400> 3
Met Ala Ala Ile Leu Ala Arg Lys Ser Leu Ser Ala Leu Arg Ser Arg
1 5 10 15
Gln Leu Val Leu Ala Gly Gln Ala Trp Gln Gly Thr Asn Thr Pro Asn
20 25 30
Gly Thr Leu Leu Gly Thr Arg Ser Phe Ala Thr Lys His Ser Phe Ser
35 40 45
Thr Asp Lys Asp Asp Glu Glu Arg Glu Gln Leu Ala Lys Glu Leu Ser
50 55 60
Lys Asp Trp Asn Ser Val Phe Glu Arg Ser Ile Asn Thr Leu Phe Leu
65 70 75 80
Thr Glu Met Val Arg Gly Leu Met Leu Thr Leu Lys Tyr Phe Phe Glu
85 90 95
Lys Lys Val Thr Ile Asn Tyr Pro Phe Glu Lys Gly Pro Leu Ser Pro
100 105 110
Arg Phe Arg Gly Glu His Ala Leu Arg Arg Tyr Ala Thr Gly Glu Glu
115 120 125
Arg Cys Ile Ala Cys Lys Leu Cys Glu Ala Ile Cys Pro Ala Gln Ala
130 135 140
Ile Thr Ile Glu Ala Glu Glu Arg Glu Asp Gly Ser Arg Arg Thr Thr
145 150 155 160
Ala Tyr Asp Ile Asp Met Thr Lys Cys Ile Tyr Cys Gly Phe Cys Gln
165 170 175
Glu Ala Cys Pro Val Asp Ala Ile Val Glu Gly Pro Asn Phe Glu Phe
180 185 190
Ala Thr Glu Thr His Glu Glu Leu Leu Tyr Asp Lys Glu Lys Leu Leu
195 200 205
Glu Asn Gly Asp Arg Trp Glu Thr Glu Ile Ala Glu Asn Leu Arg Ser
210 215 220
Glu Ser Leu Tyr Arg
225
<210> 4
<211> 40
<212> DNA
<213> 人工序列(Artificial Sequence)
<400> 4
ccgcgcggca gccatatggc cgctatatta gctcgcaagt 40
<210> 5
<211> 43
<212> DNA
<213> 人工序列(Artificial Sequence)
<400> 5
agtcatgcta gccatatgtc agcgatagag gctttcagat ctc 43
<210> 6
<211> 31
<212> DNA
<213> 人工序列(Artificial Sequence)
<400> 6
gctgaacaac tgcgtatgat atcgatatga c 31
<210> 7
<211> 31
<212> DNA
<213> 人工序列(Artificial Sequence)
<400> 7
gtcatatcga tatcatacgc agttgttcga c 31

Claims (9)

1.NADH脱氢酶的突变体SlNOXR161A,其特征在于,氨基酸序列如SEQ ID NO.3所示。
2.一种编码权利要求1所述的突变体SlNOXR161A的基因。
3.一种含有权利要求2所述的编码突变体SlNOXR161A的基因的重组表达质粒。
4.根据权利要求3所述的重组表达质粒,其特征在于,所述的表达质粒是表达载体pET28a(+)。
5.一种含有权利要求3或4所述的重组表达质粒的宿主表达细胞。
6.根据权利要求5所述的宿主表达细胞,其特征在于,所述的宿主表达细胞是大肠杆菌。
7.权利要求1所述的突变体SlNOXR161A在催化NADH获得NAD+中的应用。
8.一种获得权利要求2所述的突变体SlNOXR161A的编码基因的方法,其特征在于,包括以下步骤:
(1)以SlNOX基因为模板,以SEQ ID NO.4和SEQ ID NO.7所示序列为引物进行PCR,得第一PCR产物,所述的SlNOX基因的核苷酸序列如SEQ ID NO.1所示;
(2)以SlNOX基因为模板,以SEQ ID NO.5和SEQ ID NO.6所示序列为引物进行PCR,得第二PCR产物;
(3)以所述第一PCR产物和第二PCR产物为模板,以SEQ ID NO .4~5所示序列为引物进行PCR,得到含酶切位点的突变体SlNOXR161A的编码基因。
9.根据权利要求8所述的方法,其特征在于,所述的步骤(1)-(3)中的PCR程序为:98℃预变性3 min;98℃变性10s、60℃退火20 s、72℃延伸60 s,35个循环;72℃延伸5 min。
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