CN113683689B - 猪源性抗猪流行性腹泻病毒n蛋白的真核表达单链抗体及其制备方法和用途 - Google Patents
猪源性抗猪流行性腹泻病毒n蛋白的真核表达单链抗体及其制备方法和用途 Download PDFInfo
- Publication number
- CN113683689B CN113683689B CN202110922550.9A CN202110922550A CN113683689B CN 113683689 B CN113683689 B CN 113683689B CN 202110922550 A CN202110922550 A CN 202110922550A CN 113683689 B CN113683689 B CN 113683689B
- Authority
- CN
- China
- Prior art keywords
- chain antibody
- epidemic diarrhea
- porcine
- eukaryotic expression
- diarrhea virus
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Active
Links
- 101710141454 Nucleoprotein Proteins 0.000 title claims abstract description 25
- 230000014509 gene expression Effects 0.000 title claims abstract description 19
- 206010012735 Diarrhoea Diseases 0.000 title claims abstract description 17
- 241000700605 Viruses Species 0.000 title claims description 13
- 238000002360 preparation method Methods 0.000 title abstract description 7
- 241000282898 Sus scrofa Species 0.000 claims abstract description 26
- 108010075254 C-Peptide Proteins 0.000 claims abstract description 9
- 108010021625 Immunoglobulin Fragments Proteins 0.000 claims abstract description 5
- 102000008394 Immunoglobulin Fragments Human genes 0.000 claims abstract description 5
- 125000003275 alpha amino acid group Chemical group 0.000 claims abstract 6
- 108090000623 proteins and genes Proteins 0.000 claims description 44
- 239000013613 expression plasmid Substances 0.000 claims description 19
- 238000000034 method Methods 0.000 claims description 12
- 239000002773 nucleotide Substances 0.000 claims description 6
- 125000003729 nucleotide group Chemical group 0.000 claims description 6
- 241001135549 Porcine epidemic diarrhea virus Species 0.000 abstract description 35
- 230000010076 replication Effects 0.000 abstract description 6
- 239000003814 drug Substances 0.000 abstract description 2
- 238000011160 research Methods 0.000 abstract description 2
- 230000003321 amplification Effects 0.000 description 27
- 238000003199 nucleic acid amplification method Methods 0.000 description 27
- 239000013612 plasmid Substances 0.000 description 17
- 239000000243 solution Substances 0.000 description 14
- 239000012634 fragment Substances 0.000 description 13
- 238000006243 chemical reaction Methods 0.000 description 8
- 239000002299 complementary DNA Substances 0.000 description 8
- 238000001890 transfection Methods 0.000 description 8
- 239000012528 membrane Substances 0.000 description 7
- 238000001712 DNA sequencing Methods 0.000 description 6
- 238000001962 electrophoresis Methods 0.000 description 6
- 239000003292 glue Substances 0.000 description 6
- 239000007788 liquid Substances 0.000 description 6
- 238000002156 mixing Methods 0.000 description 6
- 239000000047 product Substances 0.000 description 6
- 238000005406 washing Methods 0.000 description 6
- 150000001413 amino acids Chemical group 0.000 description 5
- 239000013592 cell lysate Substances 0.000 description 5
- 238000010276 construction Methods 0.000 description 5
- 238000003259 recombinant expression Methods 0.000 description 5
- 238000002965 ELISA Methods 0.000 description 4
- 108090000790 Enzymes Proteins 0.000 description 4
- 102000004190 Enzymes Human genes 0.000 description 4
- QYSFWUIXDFJUDW-DCAQKATOSA-N Ser-Leu-Arg Chemical compound [H]N[C@@H](CO)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCCNC(N)=N)C(O)=O QYSFWUIXDFJUDW-DCAQKATOSA-N 0.000 description 4
- 239000003153 chemical reaction reagent Substances 0.000 description 4
- 238000003776 cleavage reaction Methods 0.000 description 4
- UQLDLKMNUJERMK-UHFFFAOYSA-L di(octadecanoyloxy)lead Chemical compound [Pb+2].CCCCCCCCCCCCCCCCCC([O-])=O.CCCCCCCCCCCCCCCCCC([O-])=O UQLDLKMNUJERMK-UHFFFAOYSA-L 0.000 description 4
- 230000000694 effects Effects 0.000 description 4
- 238000001976 enzyme digestion Methods 0.000 description 4
- 239000000499 gel Substances 0.000 description 4
- 239000011259 mixed solution Substances 0.000 description 4
- 239000000203 mixture Substances 0.000 description 4
- 239000013642 negative control Substances 0.000 description 4
- 102000004169 proteins and genes Human genes 0.000 description 4
- 238000010839 reverse transcription Methods 0.000 description 4
- 230000007017 scission Effects 0.000 description 4
- 239000006228 supernatant Substances 0.000 description 4
- HKZAAJSTFUZYTO-LURJTMIESA-N (2s)-2-[[2-[[2-[[2-[(2-aminoacetyl)amino]acetyl]amino]acetyl]amino]acetyl]amino]-3-hydroxypropanoic acid Chemical compound NCC(=O)NCC(=O)NCC(=O)NCC(=O)N[C@@H](CO)C(O)=O HKZAAJSTFUZYTO-LURJTMIESA-N 0.000 description 3
- 241000588724 Escherichia coli Species 0.000 description 3
- SOEGEPHNZOISMT-BYPYZUCNSA-N Gly-Ser-Gly Chemical compound NCC(=O)N[C@@H](CO)C(=O)NCC(O)=O SOEGEPHNZOISMT-BYPYZUCNSA-N 0.000 description 3
- 239000006180 TBST buffer Substances 0.000 description 3
- MWUYSCVVPVITMW-IGNZVWTISA-N Tyr-Tyr-Ala Chemical compound C([C@@H](C(=O)N[C@@H](C)C(O)=O)NC(=O)[C@@H](N)CC=1C=CC(O)=CC=1)C1=CC=C(O)C=C1 MWUYSCVVPVITMW-IGNZVWTISA-N 0.000 description 3
- 238000000246 agarose gel electrophoresis Methods 0.000 description 3
- 108010069205 aspartyl-phenylalanine Proteins 0.000 description 3
- 230000027455 binding Effects 0.000 description 3
- 239000011248 coating agent Substances 0.000 description 3
- 238000000576 coating method Methods 0.000 description 3
- 238000010790 dilution Methods 0.000 description 3
- 239000012895 dilution Substances 0.000 description 3
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 description 3
- 239000013604 expression vector Substances 0.000 description 3
- 108010001064 glycyl-glycyl-glycyl-glycine Proteins 0.000 description 3
- 239000001963 growth medium Substances 0.000 description 3
- 239000000843 powder Substances 0.000 description 3
- 238000012216 screening Methods 0.000 description 3
- 238000007789 sealing Methods 0.000 description 3
- 235000020183 skimmed milk Nutrition 0.000 description 3
- 210000000952 spleen Anatomy 0.000 description 3
- 239000013598 vector Substances 0.000 description 3
- 239000002699 waste material Substances 0.000 description 3
- 238000001262 western blot Methods 0.000 description 3
- GCTANJIJJROSLH-GVARAGBVSA-N Ala-Tyr-Ile Chemical compound CC[C@H](C)[C@@H](C(=O)O)NC(=O)[C@H](CC1=CC=C(C=C1)O)NC(=O)[C@H](C)N GCTANJIJJROSLH-GVARAGBVSA-N 0.000 description 2
- UVTGNSWSRSCPLP-UHFFFAOYSA-N Arg-Tyr Natural products NC(CCNC(=N)N)C(=O)NC(Cc1ccc(O)cc1)C(=O)O UVTGNSWSRSCPLP-UHFFFAOYSA-N 0.000 description 2
- BIVYLQMZPHDUIH-WHFBIAKZSA-N Asp-Gly-Cys Chemical compound C([C@@H](C(=O)NCC(=O)N[C@@H](CS)C(=O)O)N)C(=O)O BIVYLQMZPHDUIH-WHFBIAKZSA-N 0.000 description 2
- JSHWXQIZOCVWIA-ZKWXMUAHSA-N Asp-Ser-Val Chemical compound [H]N[C@@H](CC(O)=O)C(=O)N[C@@H](CO)C(=O)N[C@@H](C(C)C)C(O)=O JSHWXQIZOCVWIA-ZKWXMUAHSA-N 0.000 description 2
- 241000283707 Capra Species 0.000 description 2
- SKSJPIBFNFPTJB-NKWVEPMBSA-N Cys-Gly-Pro Chemical compound C1C[C@@H](N(C1)C(=O)CNC(=O)[C@H](CS)N)C(=O)O SKSJPIBFNFPTJB-NKWVEPMBSA-N 0.000 description 2
- OYTPNWYZORARHL-XHNCKOQMSA-N Gln-Ala-Pro Chemical compound C[C@@H](C(=O)N1CCC[C@@H]1C(=O)O)NC(=O)[C@H](CCC(=O)N)N OYTPNWYZORARHL-XHNCKOQMSA-N 0.000 description 2
- MSHXWFKYXJTLEZ-CIUDSAMLSA-N Gln-Met-Asn Chemical compound CSCC[C@@H](C(=O)N[C@@H](CC(=O)N)C(=O)O)NC(=O)[C@H](CCC(=O)N)N MSHXWFKYXJTLEZ-CIUDSAMLSA-N 0.000 description 2
- FQCILXROGNOZON-YUMQZZPRSA-N Gln-Pro-Gly Chemical compound NC(=O)CC[C@H](N)C(=O)N1CCC[C@H]1C(=O)NCC(O)=O FQCILXROGNOZON-YUMQZZPRSA-N 0.000 description 2
- LGYZYFFDELZWRS-DCAQKATOSA-N Glu-Glu-Lys Chemical compound NCCCC[C@@H](C(O)=O)NC(=O)[C@H](CCC(O)=O)NC(=O)[C@@H](N)CCC(O)=O LGYZYFFDELZWRS-DCAQKATOSA-N 0.000 description 2
- KRRMJKMGWWXWDW-STQMWFEESA-N Gly-Arg-Phe Chemical compound NC(=N)NCCC[C@H](NC(=O)CN)C(=O)N[C@H](C(O)=O)CC1=CC=CC=C1 KRRMJKMGWWXWDW-STQMWFEESA-N 0.000 description 2
- MIIVFRCYJABHTQ-ONGXEEELSA-N Gly-Leu-Val Chemical compound [H]NCC(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](C(C)C)C(O)=O MIIVFRCYJABHTQ-ONGXEEELSA-N 0.000 description 2
- PDUHNKAFQXQNLH-ZETCQYMHSA-N Gly-Lys-Gly Chemical compound NCCCC[C@H](NC(=O)CN)C(=O)NCC(O)=O PDUHNKAFQXQNLH-ZETCQYMHSA-N 0.000 description 2
- GAFKBWKVXNERFA-QWRGUYRKSA-N Gly-Phe-Asp Chemical compound OC(=O)C[C@@H](C(O)=O)NC(=O)[C@@H](NC(=O)CN)CC1=CC=CC=C1 GAFKBWKVXNERFA-QWRGUYRKSA-N 0.000 description 2
- LCRDMSSAKLTKBU-ZDLURKLDSA-N Gly-Ser-Thr Chemical compound C[C@@H](O)[C@@H](C(O)=O)NC(=O)[C@H](CO)NC(=O)CN LCRDMSSAKLTKBU-ZDLURKLDSA-N 0.000 description 2
- SYOJVRNQCXYEOV-XVKPBYJWSA-N Gly-Val-Glu Chemical compound [H]NCC(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CCC(O)=O)C(O)=O SYOJVRNQCXYEOV-XVKPBYJWSA-N 0.000 description 2
- RYAOJUMWLWUGNW-QMMMGPOBSA-N Gly-Val-Gly Chemical compound NCC(=O)N[C@@H](C(C)C)C(=O)NCC(O)=O RYAOJUMWLWUGNW-QMMMGPOBSA-N 0.000 description 2
- PMGDADKJMCOXHX-UHFFFAOYSA-N L-Arginyl-L-glutamin-acetat Natural products NC(=N)NCCCC(N)C(=O)NC(CCC(N)=O)C(O)=O PMGDADKJMCOXHX-UHFFFAOYSA-N 0.000 description 2
- FEHQLKKBVJHSEC-SZMVWBNQSA-N Leu-Glu-Trp Chemical compound C1=CC=C2C(C[C@H](NC(=O)[C@H](CCC(O)=O)NC(=O)[C@@H](N)CC(C)C)C(O)=O)=CNC2=C1 FEHQLKKBVJHSEC-SZMVWBNQSA-N 0.000 description 2
- KIZIOFNVSOSKJI-CIUDSAMLSA-N Leu-Ser-Cys Chemical compound CC(C)C[C@@H](C(=O)N[C@@H](CO)C(=O)N[C@@H](CS)C(=O)O)N KIZIOFNVSOSKJI-CIUDSAMLSA-N 0.000 description 2
- AIMGJYMCTAABEN-GVXVVHGQSA-N Leu-Val-Glu Chemical compound [H]N[C@@H](CC(C)C)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CCC(O)=O)C(O)=O AIMGJYMCTAABEN-GVXVVHGQSA-N 0.000 description 2
- QUYCUALODHJQLK-CIUDSAMLSA-N Lys-Asp-Asp Chemical compound [H]N[C@@H](CCCCN)C(=O)N[C@@H](CC(O)=O)C(=O)N[C@@H](CC(O)=O)C(O)=O QUYCUALODHJQLK-CIUDSAMLSA-N 0.000 description 2
- SITLTJHOQZFJGG-UHFFFAOYSA-N N-L-alpha-glutamyl-L-valine Natural products CC(C)C(C(O)=O)NC(=O)C(N)CCC(O)=O SITLTJHOQZFJGG-UHFFFAOYSA-N 0.000 description 2
- XZFYRXDAULDNFX-UHFFFAOYSA-N N-L-cysteinyl-L-phenylalanine Natural products SCC(N)C(=O)NC(C(O)=O)CC1=CC=CC=C1 XZFYRXDAULDNFX-UHFFFAOYSA-N 0.000 description 2
- AJHCSUXXECOXOY-UHFFFAOYSA-N N-glycyl-L-tryptophan Natural products C1=CC=C2C(CC(NC(=O)CN)C(O)=O)=CNC2=C1 AJHCSUXXECOXOY-UHFFFAOYSA-N 0.000 description 2
- 239000012570 Opti-MEM I medium Substances 0.000 description 2
- CGOMLCQJEMWMCE-STQMWFEESA-N Phe-Arg-Gly Chemical compound NC(N)=NCCC[C@@H](C(=O)NCC(O)=O)NC(=O)[C@@H](N)CC1=CC=CC=C1 CGOMLCQJEMWMCE-STQMWFEESA-N 0.000 description 2
- 108700038419 Porcine epidemic diarrhea virus M Proteins 0.000 description 2
- CDVFZMOFNJPUDD-ACZMJKKPSA-N Ser-Gln-Asn Chemical compound [H]N[C@@H](CO)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CC(N)=O)C(O)=O CDVFZMOFNJPUDD-ACZMJKKPSA-N 0.000 description 2
- YMTLKLXDFCSCNX-BYPYZUCNSA-N Ser-Gly-Gly Chemical compound OC[C@H](N)C(=O)NCC(=O)NCC(O)=O YMTLKLXDFCSCNX-BYPYZUCNSA-N 0.000 description 2
- QAOWNCQODCNURD-UHFFFAOYSA-N Sulfuric acid Chemical compound OS(O)(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-N 0.000 description 2
- 241001052560 Thallis Species 0.000 description 2
- MQCPGOZXFSYJPS-KZVJFYERSA-N Thr-Ala-Arg Chemical compound [H]N[C@@H]([C@@H](C)O)C(=O)N[C@@H](C)C(=O)N[C@@H](CCCNC(N)=N)C(O)=O MQCPGOZXFSYJPS-KZVJFYERSA-N 0.000 description 2
- YRNBANYVJJBGDI-VZFHVOOUSA-N Thr-Ala-Cys Chemical compound C[C@H]([C@@H](C(=O)N[C@@H](C)C(=O)N[C@@H](CS)C(=O)O)N)O YRNBANYVJJBGDI-VZFHVOOUSA-N 0.000 description 2
- DCLBXIWHLVEPMQ-JRQIVUDYSA-N Thr-Asp-Tyr Chemical compound C[C@@H](O)[C@H](N)C(=O)N[C@@H](CC(O)=O)C(=O)N[C@H](C(O)=O)CC1=CC=C(O)C=C1 DCLBXIWHLVEPMQ-JRQIVUDYSA-N 0.000 description 2
- LGNBRHZANHMZHK-NUMRIWBASA-N Thr-Glu-Asp Chemical compound C[C@H]([C@@H](C(=O)N[C@@H](CCC(=O)O)C(=O)N[C@@H](CC(=O)O)C(=O)O)N)O LGNBRHZANHMZHK-NUMRIWBASA-N 0.000 description 2
- FQPDRTDDEZXCEC-SVSWQMSJSA-N Thr-Ile-Ser Chemical compound [H]N[C@@H]([C@@H](C)O)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](CO)C(O)=O FQPDRTDDEZXCEC-SVSWQMSJSA-N 0.000 description 2
- MBLJBGZWLHTJBH-SZMVWBNQSA-N Trp-Val-Arg Chemical compound C1=CC=C2C(C[C@H](N)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CCCN=C(N)N)C(O)=O)=CNC2=C1 MBLJBGZWLHTJBH-SZMVWBNQSA-N 0.000 description 2
- AZGZDDNKFFUDEH-QWRGUYRKSA-N Tyr-Gly-Ser Chemical compound OC[C@@H](C(O)=O)NC(=O)CNC(=O)[C@@H](N)CC1=CC=C(O)C=C1 AZGZDDNKFFUDEH-QWRGUYRKSA-N 0.000 description 2
- ZPFLBLFITJCBTP-QWRGUYRKSA-N Tyr-Ser-Gly Chemical compound [H]N[C@@H](CC1=CC=C(O)C=C1)C(=O)N[C@@H](CO)C(=O)NCC(O)=O ZPFLBLFITJCBTP-QWRGUYRKSA-N 0.000 description 2
- ANHVRCNNGJMJNG-BZSNNMDCSA-N Tyr-Tyr-Cys Chemical compound C1=CC(=CC=C1C[C@@H](C(=O)N[C@@H](CC2=CC=C(C=C2)O)C(=O)N[C@@H](CS)C(=O)O)N)O ANHVRCNNGJMJNG-BZSNNMDCSA-N 0.000 description 2
- LAYSXAOGWHKNED-XPUUQOCRSA-N Val-Gly-Ser Chemical compound CC(C)[C@H](N)C(=O)NCC(=O)N[C@@H](CO)C(O)=O LAYSXAOGWHKNED-XPUUQOCRSA-N 0.000 description 2
- GBIUHAYJGWVNLN-UHFFFAOYSA-N Val-Ser-Pro Natural products CC(C)C(N)C(=O)NC(CO)C(=O)N1CCCC1C(O)=O GBIUHAYJGWVNLN-UHFFFAOYSA-N 0.000 description 2
- 108010081404 acein-2 Proteins 0.000 description 2
- 108010069020 alanyl-prolyl-glycine Proteins 0.000 description 2
- 108010086434 alanyl-seryl-glycine Proteins 0.000 description 2
- 238000004458 analytical method Methods 0.000 description 2
- 238000000137 annealing Methods 0.000 description 2
- 239000000427 antigen Substances 0.000 description 2
- 102000036639 antigens Human genes 0.000 description 2
- 108091007433 antigens Proteins 0.000 description 2
- 108010008355 arginyl-glutamine Proteins 0.000 description 2
- 108010009111 arginyl-glycyl-glutamic acid Proteins 0.000 description 2
- 230000001580 bacterial effect Effects 0.000 description 2
- 230000000903 blocking effect Effects 0.000 description 2
- 239000000872 buffer Substances 0.000 description 2
- 239000007853 buffer solution Substances 0.000 description 2
- 238000010805 cDNA synthesis kit Methods 0.000 description 2
- 238000005119 centrifugation Methods 0.000 description 2
- 238000010367 cloning Methods 0.000 description 2
- 238000012258 culturing Methods 0.000 description 2
- 108010069495 cysteinyltyrosine Proteins 0.000 description 2
- 238000004925 denaturation Methods 0.000 description 2
- 230000036425 denaturation Effects 0.000 description 2
- 238000011161 development Methods 0.000 description 2
- 201000010099 disease Diseases 0.000 description 2
- 238000002474 experimental method Methods 0.000 description 2
- 108010067216 glycyl-glycyl-glycine Proteins 0.000 description 2
- XKUKSGPZAADMRA-UHFFFAOYSA-N glycyl-glycyl-glycine Natural products NCC(=O)NCC(=O)NCC(O)=O XKUKSGPZAADMRA-UHFFFAOYSA-N 0.000 description 2
- 108010077435 glycyl-phenylalanyl-glycine Proteins 0.000 description 2
- 108010084389 glycyltryptophan Proteins 0.000 description 2
- 238000011534 incubation Methods 0.000 description 2
- 208000015181 infectious disease Diseases 0.000 description 2
- 108010044374 isoleucyl-tyrosine Proteins 0.000 description 2
- 239000006166 lysate Substances 0.000 description 2
- 238000010369 molecular cloning Methods 0.000 description 2
- YBYRMVIVWMBXKQ-UHFFFAOYSA-N phenylmethanesulfonyl fluoride Chemical compound FS(=O)(=O)CC1=CC=CC=C1 YBYRMVIVWMBXKQ-UHFFFAOYSA-N 0.000 description 2
- 238000012257 pre-denaturation Methods 0.000 description 2
- 108090000765 processed proteins & peptides Proteins 0.000 description 2
- 230000009465 prokaryotic expression Effects 0.000 description 2
- 108010020755 prolyl-glycyl-glycine Proteins 0.000 description 2
- 108010029020 prolylglycine Proteins 0.000 description 2
- 238000011084 recovery Methods 0.000 description 2
- 238000003757 reverse transcription PCR Methods 0.000 description 2
- 238000000926 separation method Methods 0.000 description 2
- 238000012163 sequencing technique Methods 0.000 description 2
- 108010069117 seryl-lysyl-aspartic acid Proteins 0.000 description 2
- 230000002194 synthesizing effect Effects 0.000 description 2
- 108010033670 threonyl-aspartyl-tyrosine Proteins 0.000 description 2
- 238000012546 transfer Methods 0.000 description 2
- 238000011144 upstream manufacturing Methods 0.000 description 2
- 108010073969 valyllysine Proteins 0.000 description 2
- 238000012795 verification Methods 0.000 description 2
- 239000011534 wash buffer Substances 0.000 description 2
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Chemical compound O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 2
- KIUYPHAMDKDICO-WHFBIAKZSA-N Ala-Asp-Gly Chemical compound C[C@H](N)C(=O)N[C@@H](CC(O)=O)C(=O)NCC(O)=O KIUYPHAMDKDICO-WHFBIAKZSA-N 0.000 description 1
- OBVSBEYOMDWLRJ-BFHQHQDPSA-N Ala-Gly-Thr Chemical compound C[C@@H](O)[C@@H](C(O)=O)NC(=O)CNC(=O)[C@H](C)N OBVSBEYOMDWLRJ-BFHQHQDPSA-N 0.000 description 1
- LNNSWWRRYJLGNI-NAKRPEOUSA-N Ala-Ile-Val Chemical compound C[C@H](N)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](C(C)C)C(O)=O LNNSWWRRYJLGNI-NAKRPEOUSA-N 0.000 description 1
- RTZCUEHYUQZIDE-WHFBIAKZSA-N Ala-Ser-Gly Chemical compound C[C@H](N)C(=O)N[C@@H](CO)C(=O)NCC(O)=O RTZCUEHYUQZIDE-WHFBIAKZSA-N 0.000 description 1
- DYXOFPBJBAHWFY-JBDRJPRFSA-N Ala-Ser-Ile Chemical compound CC[C@H](C)[C@@H](C(O)=O)NC(=O)[C@H](CO)NC(=O)[C@H](C)N DYXOFPBJBAHWFY-JBDRJPRFSA-N 0.000 description 1
- VDCIPFYVCICPEC-FXQIFTODSA-N Asn-Arg-Ala Chemical compound [H]N[C@@H](CC(N)=O)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](C)C(O)=O VDCIPFYVCICPEC-FXQIFTODSA-N 0.000 description 1
- LGCVSPFCFXWUEY-IHPCNDPISA-N Asn-Trp-Tyr Chemical compound C1=CC=C2C(=C1)C(=CN2)C[C@@H](C(=O)N[C@@H](CC3=CC=C(C=C3)O)C(=O)O)NC(=O)[C@H](CC(=O)N)N LGCVSPFCFXWUEY-IHPCNDPISA-N 0.000 description 1
- MRQQMVZUHXUPEV-IHRRRGAJSA-N Asp-Arg-Phe Chemical compound [H]N[C@@H](CC(O)=O)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](CC1=CC=CC=C1)C(O)=O MRQQMVZUHXUPEV-IHRRRGAJSA-N 0.000 description 1
- VIRHEUMYXXLCBF-WDSKDSINSA-N Asp-Gly-Glu Chemical compound [H]N[C@@H](CC(O)=O)C(=O)NCC(=O)N[C@@H](CCC(O)=O)C(O)=O VIRHEUMYXXLCBF-WDSKDSINSA-N 0.000 description 1
- XWKPSMRPIKKDDU-RCOVLWMOSA-N Asp-Val-Gly Chemical compound [H]N[C@@H](CC(O)=O)C(=O)N[C@@H](C(C)C)C(=O)NCC(O)=O XWKPSMRPIKKDDU-RCOVLWMOSA-N 0.000 description 1
- 241000894006 Bacteria Species 0.000 description 1
- GEEXORWTBTUOHC-FXQIFTODSA-N Cys-Arg-Ser Chemical compound C(C[C@@H](C(=O)N[C@@H](CO)C(=O)O)NC(=O)[C@H](CS)N)CN=C(N)N GEEXORWTBTUOHC-FXQIFTODSA-N 0.000 description 1
- BBQIWFFTTQTNOC-AVGNSLFASA-N Cys-Phe-Gln Chemical compound C1=CC=C(C=C1)C[C@@H](C(=O)N[C@@H](CCC(=O)N)C(=O)O)NC(=O)[C@H](CS)N BBQIWFFTTQTNOC-AVGNSLFASA-N 0.000 description 1
- 230000004568 DNA-binding Effects 0.000 description 1
- 208000005156 Dehydration Diseases 0.000 description 1
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 1
- VLOLPWWCNKWRNB-LOKLDPHHSA-N Gln-Thr-Pro Chemical compound C[C@H]([C@@H](C(=O)N1CCC[C@@H]1C(=O)O)NC(=O)[C@H](CCC(=O)N)N)O VLOLPWWCNKWRNB-LOKLDPHHSA-N 0.000 description 1
- LKDIBBOKUAASNP-FXQIFTODSA-N Glu-Ala-Glu Chemical compound OC(=O)CC[C@H](N)C(=O)N[C@@H](C)C(=O)N[C@@H](CCC(O)=O)C(O)=O LKDIBBOKUAASNP-FXQIFTODSA-N 0.000 description 1
- WATXSTJXNBOHKD-LAEOZQHASA-N Glu-Asp-Val Chemical compound [H]N[C@@H](CCC(O)=O)C(=O)N[C@@H](CC(O)=O)C(=O)N[C@@H](C(C)C)C(O)=O WATXSTJXNBOHKD-LAEOZQHASA-N 0.000 description 1
- YGLCLCMAYUYZSG-AVGNSLFASA-N Glu-Lys-His Chemical compound OC(=O)CC[C@H](N)C(=O)N[C@@H](CCCCN)C(=O)N[C@H](C(O)=O)CC1=CN=CN1 YGLCLCMAYUYZSG-AVGNSLFASA-N 0.000 description 1
- QJVZSVUYZFYLFQ-CIUDSAMLSA-N Glu-Pro-Ala Chemical compound [H]N[C@@H](CCC(O)=O)C(=O)N1CCC[C@H]1C(=O)N[C@@H](C)C(O)=O QJVZSVUYZFYLFQ-CIUDSAMLSA-N 0.000 description 1
- BEQGFMIBZFNROK-JGVFFNPUSA-N Gly-Glu-Pro Chemical compound C1C[C@@H](N(C1)C(=O)[C@H](CCC(=O)O)NC(=O)CN)C(=O)O BEQGFMIBZFNROK-JGVFFNPUSA-N 0.000 description 1
- TWTPDFFBLQEBOE-IUCAKERBSA-N Gly-Leu-Gln Chemical compound [H]NCC(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCC(N)=O)C(O)=O TWTPDFFBLQEBOE-IUCAKERBSA-N 0.000 description 1
- IGOYNRWLWHWAQO-JTQLQIEISA-N Gly-Phe-Gly Chemical compound OC(=O)CNC(=O)[C@@H](NC(=O)CN)CC1=CC=CC=C1 IGOYNRWLWHWAQO-JTQLQIEISA-N 0.000 description 1
- NVTPVQLIZCOJFK-FOHZUACHSA-N Gly-Thr-Asp Chemical compound [H]NCC(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H](CC(O)=O)C(O)=O NVTPVQLIZCOJFK-FOHZUACHSA-N 0.000 description 1
- XHVONGZZVUUORG-WEDXCCLWSA-N Gly-Thr-Lys Chemical compound NCC(=O)N[C@@H]([C@H](O)C)C(=O)N[C@H](C(O)=O)CCCCN XHVONGZZVUUORG-WEDXCCLWSA-N 0.000 description 1
- IZVICCORZOSGPT-JSGCOSHPSA-N Gly-Val-Tyr Chemical compound [H]NCC(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CC1=CC=C(O)C=C1)C(O)=O IZVICCORZOSGPT-JSGCOSHPSA-N 0.000 description 1
- 101710088172 HTH-type transcriptional regulator RipA Proteins 0.000 description 1
- JHNJNTMTZHEDLJ-NAKRPEOUSA-N Ile-Ser-Arg Chemical compound CC[C@H](C)[C@H](N)C(=O)N[C@@H](CO)C(=O)N[C@@H](CCCN=C(N)N)C(O)=O JHNJNTMTZHEDLJ-NAKRPEOUSA-N 0.000 description 1
- 108010065920 Insulin Lispro Proteins 0.000 description 1
- TYYLDKGBCJGJGW-UHFFFAOYSA-N L-tryptophan-L-tyrosine Natural products C=1NC2=CC=CC=C2C=1CC(N)C(=O)NC(C(O)=O)CC1=CC=C(O)C=C1 TYYLDKGBCJGJGW-UHFFFAOYSA-N 0.000 description 1
- 241000880493 Leptailurus serval Species 0.000 description 1
- USTCFDAQCLDPBD-XIRDDKMYSA-N Leu-Asn-Trp Chemical compound CC(C)C[C@@H](C(=O)N[C@@H](CC(=O)N)C(=O)N[C@@H](CC1=CNC2=CC=CC=C21)C(=O)O)N USTCFDAQCLDPBD-XIRDDKMYSA-N 0.000 description 1
- FQZPTCNSNPWHLJ-AVGNSLFASA-N Leu-Gln-Lys Chemical compound CC(C)C[C@H](N)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CCCCN)C(O)=O FQZPTCNSNPWHLJ-AVGNSLFASA-N 0.000 description 1
- GPICTNQYKHHHTH-GUBZILKMSA-N Leu-Gln-Ser Chemical compound CC(C)C[C@H](N)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CO)C(O)=O GPICTNQYKHHHTH-GUBZILKMSA-N 0.000 description 1
- HPBCTWSUJOGJSH-MNXVOIDGSA-N Leu-Glu-Ile Chemical compound [H]N[C@@H](CC(C)C)C(=O)N[C@@H](CCC(O)=O)C(=O)N[C@@H]([C@@H](C)CC)C(O)=O HPBCTWSUJOGJSH-MNXVOIDGSA-N 0.000 description 1
- NRFGTHFONZYFNY-MGHWNKPDSA-N Leu-Ile-Tyr Chemical compound CC(C)C[C@H](N)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@H](C(O)=O)CC1=CC=C(O)C=C1 NRFGTHFONZYFNY-MGHWNKPDSA-N 0.000 description 1
- KYIIALJHAOIAHF-KKUMJFAQSA-N Leu-Leu-His Chemical compound CC(C)C[C@H](N)C(=O)N[C@@H](CC(C)C)C(=O)N[C@H](C(O)=O)CC1=CN=CN1 KYIIALJHAOIAHF-KKUMJFAQSA-N 0.000 description 1
- FAELBUXXFQLUAX-AJNGGQMLSA-N Leu-Leu-Ile Chemical compound CC[C@H](C)[C@@H](C(O)=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@@H](N)CC(C)C FAELBUXXFQLUAX-AJNGGQMLSA-N 0.000 description 1
- XOWMDXHFSBCAKQ-SRVKXCTJSA-N Leu-Ser-Leu Chemical compound CC(C)C[C@H](N)C(=O)N[C@@H](CO)C(=O)N[C@H](C(O)=O)CC(C)C XOWMDXHFSBCAKQ-SRVKXCTJSA-N 0.000 description 1
- LCNASHSOFMRYFO-WDCWCFNPSA-N Leu-Thr-Gln Chemical compound CC(C)C[C@H](N)C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@H](C(O)=O)CCC(N)=O LCNASHSOFMRYFO-WDCWCFNPSA-N 0.000 description 1
- 102000003960 Ligases Human genes 0.000 description 1
- 108090000364 Ligases Proteins 0.000 description 1
- OWRUUFUVXFREBD-KKUMJFAQSA-N Lys-His-Leu Chemical compound [H]N[C@@H](CCCCN)C(=O)N[C@@H](CC1=CNC=N1)C(=O)N[C@@H](CC(C)C)C(O)=O OWRUUFUVXFREBD-KKUMJFAQSA-N 0.000 description 1
- SKRGVGLIRUGANF-AVGNSLFASA-N Lys-Leu-Glu Chemical compound [H]N[C@@H](CCCCN)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCC(O)=O)C(O)=O SKRGVGLIRUGANF-AVGNSLFASA-N 0.000 description 1
- PDIDTSZKKFEDMB-UWVGGRQHSA-N Lys-Pro-Gly Chemical compound [H]N[C@@H](CCCCN)C(=O)N1CCC[C@H]1C(=O)NCC(O)=O PDIDTSZKKFEDMB-UWVGGRQHSA-N 0.000 description 1
- 241001529936 Murinae Species 0.000 description 1
- 239000012124 Opti-MEM Substances 0.000 description 1
- 108020002230 Pancreatic Ribonuclease Proteins 0.000 description 1
- 102000005891 Pancreatic ribonuclease Human genes 0.000 description 1
- JJHVFCUWLSKADD-ONGXEEELSA-N Phe-Gly-Ala Chemical compound [H]N[C@@H](CC1=CC=CC=C1)C(=O)NCC(=O)N[C@@H](C)C(O)=O JJHVFCUWLSKADD-ONGXEEELSA-N 0.000 description 1
- BSKMOCNNLNDIMU-CDMKHQONSA-N Phe-Thr-Gly Chemical compound [H]N[C@@H](CC1=CC=CC=C1)C(=O)N[C@@H]([C@@H](C)O)C(=O)NCC(O)=O BSKMOCNNLNDIMU-CDMKHQONSA-N 0.000 description 1
- KLYYKKGCPOGDPE-OEAJRASXSA-N Phe-Thr-Leu Chemical compound [H]N[C@@H](CC1=CC=CC=C1)C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H](CC(C)C)C(O)=O KLYYKKGCPOGDPE-OEAJRASXSA-N 0.000 description 1
- JARJPEMLQAWNBR-GUBZILKMSA-N Pro-Asp-Arg Chemical compound [H]N1CCC[C@H]1C(=O)N[C@@H](CC(O)=O)C(=O)N[C@@H](CCCNC(N)=N)C(O)=O JARJPEMLQAWNBR-GUBZILKMSA-N 0.000 description 1
- HJSCRFZVGXAGNG-SRVKXCTJSA-N Pro-Gln-Leu Chemical compound CC(C)C[C@@H](C(O)=O)NC(=O)[C@H](CCC(N)=O)NC(=O)[C@@H]1CCCN1 HJSCRFZVGXAGNG-SRVKXCTJSA-N 0.000 description 1
- JMVQDLDPDBXAAX-YUMQZZPRSA-N Pro-Gly-Gln Chemical compound NC(=O)CC[C@@H](C(O)=O)NC(=O)CNC(=O)[C@@H]1CCCN1 JMVQDLDPDBXAAX-YUMQZZPRSA-N 0.000 description 1
- LZHHZYDPMZEMRX-STQMWFEESA-N Pro-Tyr-Gly Chemical compound [H]N1CCC[C@H]1C(=O)N[C@@H](CC1=CC=C(O)C=C1)C(=O)NCC(O)=O LZHHZYDPMZEMRX-STQMWFEESA-N 0.000 description 1
- 238000012300 Sequence Analysis Methods 0.000 description 1
- WTWGOQRNRFHFQD-JBDRJPRFSA-N Ser-Ala-Ile Chemical compound [H]N[C@@H](CO)C(=O)N[C@@H](C)C(=O)N[C@@H]([C@@H](C)CC)C(O)=O WTWGOQRNRFHFQD-JBDRJPRFSA-N 0.000 description 1
- HBOABDXGTMMDSE-GUBZILKMSA-N Ser-Arg-Val Chemical compound [H]N[C@@H](CO)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](C(C)C)C(O)=O HBOABDXGTMMDSE-GUBZILKMSA-N 0.000 description 1
- BLPYXIXXCFVIIF-FXQIFTODSA-N Ser-Cys-Arg Chemical compound C(C[C@@H](C(=O)O)NC(=O)[C@H](CS)NC(=O)[C@H](CO)N)CN=C(N)N BLPYXIXXCFVIIF-FXQIFTODSA-N 0.000 description 1
- FMDHKPRACUXATF-ACZMJKKPSA-N Ser-Gln-Ser Chemical compound OC[C@H](N)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CO)C(O)=O FMDHKPRACUXATF-ACZMJKKPSA-N 0.000 description 1
- UIGMAMGZOJVTDN-WHFBIAKZSA-N Ser-Gly-Ser Chemical compound OC[C@H](N)C(=O)NCC(=O)N[C@@H](CO)C(O)=O UIGMAMGZOJVTDN-WHFBIAKZSA-N 0.000 description 1
- XXXAXOWMBOKTRN-XPUUQOCRSA-N Ser-Gly-Val Chemical compound [H]N[C@@H](CO)C(=O)NCC(=O)N[C@@H](C(C)C)C(O)=O XXXAXOWMBOKTRN-XPUUQOCRSA-N 0.000 description 1
- UIPXCLNLUUAMJU-JBDRJPRFSA-N Ser-Ile-Ser Chemical compound [H]N[C@@H](CO)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](CO)C(O)=O UIPXCLNLUUAMJU-JBDRJPRFSA-N 0.000 description 1
- VMLONWHIORGALA-SRVKXCTJSA-N Ser-Leu-Leu Chemical compound CC(C)C[C@@H](C([O-])=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@@H]([NH3+])CO VMLONWHIORGALA-SRVKXCTJSA-N 0.000 description 1
- YUJLIIRMIAGMCQ-CIUDSAMLSA-N Ser-Leu-Ser Chemical compound [H]N[C@@H](CO)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CO)C(O)=O YUJLIIRMIAGMCQ-CIUDSAMLSA-N 0.000 description 1
- WNDUPCKKKGSKIQ-CIUDSAMLSA-N Ser-Pro-Gln Chemical compound OC[C@H](N)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CCC(N)=O)C(O)=O WNDUPCKKKGSKIQ-CIUDSAMLSA-N 0.000 description 1
- XGQKSRGHEZNWIS-IHRRRGAJSA-N Ser-Pro-Tyr Chemical compound N[C@@H](CO)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1ccc(O)cc1)C(O)=O XGQKSRGHEZNWIS-IHRRRGAJSA-N 0.000 description 1
- FZXOPYUEQGDGMS-ACZMJKKPSA-N Ser-Ser-Gln Chemical compound [H]N[C@@H](CO)C(=O)N[C@@H](CO)C(=O)N[C@@H](CCC(N)=O)C(O)=O FZXOPYUEQGDGMS-ACZMJKKPSA-N 0.000 description 1
- JGUWRQWULDWNCM-FXQIFTODSA-N Ser-Val-Ser Chemical compound [H]N[C@@H](CO)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CO)C(O)=O JGUWRQWULDWNCM-FXQIFTODSA-N 0.000 description 1
- 241000282887 Suidae Species 0.000 description 1
- IRKWVRSEQFTGGV-VEVYYDQMSA-N Thr-Asn-Arg Chemical compound [H]N[C@@H]([C@@H](C)O)C(=O)N[C@@H](CC(N)=O)C(=O)N[C@@H](CCCNC(N)=N)C(O)=O IRKWVRSEQFTGGV-VEVYYDQMSA-N 0.000 description 1
- KRPKYGOFYUNIGM-XVSYOHENSA-N Thr-Asp-Phe Chemical compound C[C@H]([C@@H](C(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](CC1=CC=CC=C1)C(=O)O)N)O KRPKYGOFYUNIGM-XVSYOHENSA-N 0.000 description 1
- DJDSEDOKJTZBAR-ZDLURKLDSA-N Thr-Gly-Ser Chemical compound C[C@@H](O)[C@H](N)C(=O)NCC(=O)N[C@@H](CO)C(O)=O DJDSEDOKJTZBAR-ZDLURKLDSA-N 0.000 description 1
- MECLEFZMPPOEAC-VOAKCMCISA-N Thr-Leu-Lys Chemical compound C[C@H]([C@@H](C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCCCN)C(=O)O)N)O MECLEFZMPPOEAC-VOAKCMCISA-N 0.000 description 1
- DEGCBBCMYWNJNA-RHYQMDGZSA-N Thr-Pro-Leu Chemical compound CC(C)C[C@@H](C(O)=O)NC(=O)[C@@H]1CCCN1C(=O)[C@@H](N)[C@@H](C)O DEGCBBCMYWNJNA-RHYQMDGZSA-N 0.000 description 1
- NOXKHHXSHQFSGJ-FQPOAREZSA-N Tyr-Ala-Thr Chemical compound C[C@@H](O)[C@@H](C(O)=O)NC(=O)[C@H](C)NC(=O)[C@@H](N)CC1=CC=C(O)C=C1 NOXKHHXSHQFSGJ-FQPOAREZSA-N 0.000 description 1
- BVDHHLMIZFCAAU-BZSNNMDCSA-N Tyr-Cys-Phe Chemical compound [H]N[C@@H](CC1=CC=C(O)C=C1)C(=O)N[C@@H](CS)C(=O)N[C@@H](CC1=CC=CC=C1)C(O)=O BVDHHLMIZFCAAU-BZSNNMDCSA-N 0.000 description 1
- NKUGCYDFQKFVOJ-JYJNAYRXSA-N Tyr-Leu-Gln Chemical compound NC(=O)CC[C@@H](C(O)=O)NC(=O)[C@H](CC(C)C)NC(=O)[C@@H](N)CC1=CC=C(O)C=C1 NKUGCYDFQKFVOJ-JYJNAYRXSA-N 0.000 description 1
- XGJLNBNZNMVJRS-NRPADANISA-N Val-Glu-Ala Chemical compound CC(C)[C@H](N)C(=O)N[C@@H](CCC(O)=O)C(=O)N[C@@H](C)C(O)=O XGJLNBNZNMVJRS-NRPADANISA-N 0.000 description 1
- SYSWVVCYSXBVJG-RHYQMDGZSA-N Val-Leu-Thr Chemical compound C[C@H]([C@@H](C(=O)O)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](C(C)C)N)O SYSWVVCYSXBVJG-RHYQMDGZSA-N 0.000 description 1
- GBIUHAYJGWVNLN-AEJSXWLSSA-N Val-Ser-Pro Chemical compound CC(C)[C@@H](C(=O)N[C@@H](CO)C(=O)N1CCC[C@@H]1C(=O)O)N GBIUHAYJGWVNLN-AEJSXWLSSA-N 0.000 description 1
- OWFGFHQMSBTKLX-UFYCRDLUSA-N Val-Tyr-Tyr Chemical compound CC(C)[C@@H](C(=O)N[C@@H](CC1=CC=C(C=C1)O)C(=O)N[C@@H](CC2=CC=C(C=C2)O)C(=O)O)N OWFGFHQMSBTKLX-UFYCRDLUSA-N 0.000 description 1
- AEFJNECXZCODJM-UWVGGRQHSA-N Val-Val-Gly Chemical compound CC(C)[C@H]([NH3+])C(=O)N[C@@H](C(C)C)C(=O)NCC([O-])=O AEFJNECXZCODJM-UWVGGRQHSA-N 0.000 description 1
- 108020000999 Viral RNA Proteins 0.000 description 1
- 206010047700 Vomiting Diseases 0.000 description 1
- 108010047495 alanylglycine Proteins 0.000 description 1
- 239000003242 anti bacterial agent Substances 0.000 description 1
- 229940088710 antibiotic agent Drugs 0.000 description 1
- 238000004113 cell culture Methods 0.000 description 1
- 230000007547 defect Effects 0.000 description 1
- 230000018044 dehydration Effects 0.000 description 1
- 238000006297 dehydration reaction Methods 0.000 description 1
- 239000008367 deionised water Substances 0.000 description 1
- 229910021641 deionized water Inorganic materials 0.000 description 1
- 238000001514 detection method Methods 0.000 description 1
- 238000004043 dyeing Methods 0.000 description 1
- 238000005516 engineering process Methods 0.000 description 1
- 238000000605 extraction Methods 0.000 description 1
- 230000008014 freezing Effects 0.000 description 1
- 238000007710 freezing Methods 0.000 description 1
- 230000004927 fusion Effects 0.000 description 1
- 108010063718 gamma-glutamylaspartic acid Proteins 0.000 description 1
- 238000010353 genetic engineering Methods 0.000 description 1
- 108010078144 glutaminyl-glycine Proteins 0.000 description 1
- VPZXBVLAVMBEQI-UHFFFAOYSA-N glycyl-DL-alpha-alanine Natural products OC(=O)C(C)NC(=O)CN VPZXBVLAVMBEQI-UHFFFAOYSA-N 0.000 description 1
- 108010089804 glycyl-threonine Proteins 0.000 description 1
- 108010010147 glycylglutamine Proteins 0.000 description 1
- 108010037850 glycylvaline Proteins 0.000 description 1
- 239000010931 gold Substances 0.000 description 1
- 229910052737 gold Inorganic materials 0.000 description 1
- 108010040030 histidinoalanine Proteins 0.000 description 1
- 108010025306 histidylleucine Proteins 0.000 description 1
- 230000003053 immunization Effects 0.000 description 1
- 230000005847 immunogenicity Effects 0.000 description 1
- 230000002401 inhibitory effect Effects 0.000 description 1
- 230000005764 inhibitory process Effects 0.000 description 1
- 208000028774 intestinal disease Diseases 0.000 description 1
- 108010078274 isoleucylvaline Proteins 0.000 description 1
- 108010034529 leucyl-lysine Proteins 0.000 description 1
- 238000009630 liquid culture Methods 0.000 description 1
- 238000011068 loading method Methods 0.000 description 1
- 239000003550 marker Substances 0.000 description 1
- 239000011159 matrix material Substances 0.000 description 1
- 239000007758 minimum essential medium Substances 0.000 description 1
- 229940126619 mouse monoclonal antibody Drugs 0.000 description 1
- 108010090894 prolylleucine Proteins 0.000 description 1
- 230000000069 prophylactic effect Effects 0.000 description 1
- 238000010814 radioimmunoprecipitation assay Methods 0.000 description 1
- 238000003753 real-time PCR Methods 0.000 description 1
- 230000006798 recombination Effects 0.000 description 1
- 238000005215 recombination Methods 0.000 description 1
- 108091008146 restriction endonucleases Proteins 0.000 description 1
- 210000002966 serum Anatomy 0.000 description 1
- 108010026333 seryl-proline Proteins 0.000 description 1
- 238000002791 soaking Methods 0.000 description 1
- 239000007787 solid Substances 0.000 description 1
- 238000010257 thawing Methods 0.000 description 1
- 238000000844 transformation Methods 0.000 description 1
- 230000009466 transformation Effects 0.000 description 1
- 230000001131 transforming effect Effects 0.000 description 1
- 108010044292 tryptophyltyrosine Proteins 0.000 description 1
- 108010003137 tyrosyltyrosine Proteins 0.000 description 1
- 238000002255 vaccination Methods 0.000 description 1
- 229960005486 vaccine Drugs 0.000 description 1
- 230000009385 viral infection Effects 0.000 description 1
- 230000003612 virological effect Effects 0.000 description 1
- 230000008673 vomiting Effects 0.000 description 1
Images
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
- C07K16/08—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from viruses
- C07K16/10—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from viruses from RNA viruses
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
- A61P31/12—Antivirals
- A61P31/14—Antivirals for RNA viruses
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/85—Vectors or expression systems specially adapted for eukaryotic hosts for animal cells
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K39/00—Medicinal preparations containing antigens or antibodies
- A61K2039/505—Medicinal preparations containing antigens or antibodies comprising antibodies
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/50—Immunoglobulins specific features characterized by immunoglobulin fragments
- C07K2317/56—Immunoglobulins specific features characterized by immunoglobulin fragments variable (Fv) region, i.e. VH and/or VL
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/60—Immunoglobulins specific features characterized by non-natural combinations of immunoglobulin fragments
- C07K2317/62—Immunoglobulins specific features characterized by non-natural combinations of immunoglobulin fragments comprising only variable region components
- C07K2317/622—Single chain antibody (scFv)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2800/00—Nucleic acids vectors
- C12N2800/10—Plasmid DNA
- C12N2800/106—Plasmid DNA for vertebrates
- C12N2800/107—Plasmid DNA for vertebrates for mammalian
-
- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
- Y02A50/00—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
- Y02A50/30—Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change
Landscapes
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Genetics & Genomics (AREA)
- Virology (AREA)
- Molecular Biology (AREA)
- General Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- Medicinal Chemistry (AREA)
- Biotechnology (AREA)
- Biophysics (AREA)
- Wood Science & Technology (AREA)
- Biomedical Technology (AREA)
- Zoology (AREA)
- Biochemistry (AREA)
- Veterinary Medicine (AREA)
- Physics & Mathematics (AREA)
- Public Health (AREA)
- Animal Behavior & Ethology (AREA)
- Pharmacology & Pharmacy (AREA)
- Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
- Plant Pathology (AREA)
- General Chemical & Material Sciences (AREA)
- Microbiology (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Oncology (AREA)
- Communicable Diseases (AREA)
- Immunology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Peptides Or Proteins (AREA)
Abstract
一种猪源性抗猪流行性腹泻病毒N蛋白的真核表达单链抗体及其制备方法和用途，该真核表达单链抗体包含猪源单链抗体片段VH‑Linker‑VL，其中：猪抗体重链可变区VH的氨基酸序列如SEQ ID No.1所示，猪抗体轻链可变区VL的氨基酸序列如SEQ ID No.2所示，Linker为中间连接肽。能够与猪流行性腹泻病毒N蛋白特异性结合，可抑制猪流行性腹泻病毒在宿主细胞内的复制，能够用于制备防治猪流行性腹泻药物的研究。
Description
技术领域
本发明涉及的是一种基因工程领域的技术，具体是一种猪源性抗猪流行性腹泻病毒N蛋白的真核表达单链抗体及其制备方法和用途。
背景技术
猪流行性腹泻(porcine epidemic diarrhea，PED)是由猪流行性腹泻病毒(porcine epidemic diarrheavirus，PEDV)感染猪引起的临床表现为腹泻、呕吐、脱水甚至死亡的一种肠道疾病。PED的传染性强，发病率高，感染后的新生仔猪的死亡率甚至高达100％，该病在全球多个国家均有爆发，造成巨大的经济损失，影响全世界养猪产业的发展。疫苗接种是预防病毒性疾病的一种有效方法，但是由于PEDV的变异速度快，商业化疫苗对变异毒株的预防效果并不理想。
发明内容
本发明针对现有技术存在的上述不足，提出一种猪源性抗猪流行性腹泻病毒N蛋白的真核表达单链抗体及其制备方法和用途，能够与猪流行性腹泻病毒N蛋白特异性结合，可抑制猪流行性腹泻病毒在宿主细胞内的复制，能够用于制备防治猪流行性腹泻药物的研究。
本发明是通过以下技术方案实现的：
本发明涉及一种真核表达单链抗体，包含猪源单链抗体片段VH-Linker-VL，其中：猪抗体重链可变区VH的氨基酸序列如SEQ ID No.1所示，猪抗体轻链可变区VL的氨基酸序列如SEQ ID No.2所示，Linker为中间连接肽。
所述的中间连接肽的核苷酸序列，如SEQ ID No.3所示。
本发明涉及上述单链抗体的实现方法，通过将猪源单链抗体片段VH-Linker-VL的编码基因插入真核表达质粒pCMV-HA，构建成为重组真核表达质粒pCMV-HA-scFv，将pCMV-HA-scFv转染Vero-E6细胞。
所述的真核表达单链抗体，其核苷酸序列如SEQ ID No.4所示，其氨基酸序列如SEQ ID No.5所示。
所述的单链抗体的分子量大小约为28kDa。
本发明涉及上述单链抗体的应用，将其用于在猪流行性腹泻病毒感染的细胞中表达，以抑制猪流行性腹泻病毒的复制。
所述的抑制，P<0.001，具有一定的抵抗猪流行性腹泻病毒感染的作用。
所述的应用，具体包括：
1)采用RT-PCR直接从重组表达的猪流行性腹泻病毒N蛋白免疫的猪脾脏组织RNA中扩增出抗体编码基因的重链可变区VH基因和轻链可变区VL基因；
2)利用SOE-PCR法将步骤1)得到的VH基因、中间连接肽和步骤1)得到的VL基因相连构建猪源性单链抗体基因；
3)将步骤2)获得的猪源性单链抗体基因克隆到原核表达载体pOPE101-XP中，构建重组质粒pOPE101-XP-scFv；
4)将步骤3)的重组质粒pOPE101-XP-scFv转化入E.coli JM109感受态细胞，经过多次转化，获得猪源性单链抗体库；
5)从步骤4)构建的猪源性单链抗体库中随机挑取单克隆，制备周质腔蛋白，以猪流行性腹泻病毒N蛋白作为包被抗原进行ELISA筛选，有阳性反应的相对应的阳性克隆即含有抗猪流行性腹泻病毒N蛋白的真核表达单链抗体。
技术效果
本发明采用RT-PCR直接从重组表达的猪流行性腹泻病毒N蛋白免疫的猪脾脏组织RNA中扩增出抗体编码基因的重链可变区VH基因和轻链可变区VL基因。利用SOE-PCR法将获得的VH基因、中间连接肽和VL基因拼接构建猪源性单链抗体编码基因(scFv)，拼接顺序为VH-Linker-VL，将获得的猪源性单链抗体编码基因克隆到原核表达载体pOPE101-XP中，构建重组质粒pOPE101-XP-scFv，多次转化E.coli JM109感受态细胞构建猪源性单链抗体文库。以重组表达的猪流行性腹泻病毒N蛋白为包被抗原，经间接ELISA筛选阳性克隆，证明该单链抗体具有特异结合猪流行性腹泻病毒N蛋白的能力，并经过DNA测序证明该单链抗体编码基因的序列正确。
与现有技术以重组表达的猪流行性腹泻病毒N蛋白免疫的小鼠的cDNA为模板，鼠源性的抗体用于猪时具有较强的免疫原性，本发明以重组表达的猪流行性腹泻病毒N蛋白免疫的猪的cDNA为模板扩增抗体编码基因，将筛选到的阳性克隆的单链抗体编码基因重组到真核表达质粒pCMV-HA中，构建成重组真核表达质粒pCMV-HA-scFv；将该重组真核表达质粒转染Vero-E6细胞，该单链抗体的分子量大小约为28kDa；该单链抗体在猪流行性腹泻病毒感染的细胞中大量表达；该单链抗体能够显著抑制猪流行性腹泻病毒的复制(P<0.001)，具有一定的抵抗猪流行性腹泻病毒感染的作用，能够用于猪流性腹泻病的预防和治疗。
附图说明
图1为VH-Linker-VL PCR电泳图；
图中：M为2000bp DNAladdermarker；1、2为VH-Linker-VL基因PCR产物；
图2为间接ELISA筛选到的一个阳性克隆图示；
图中：NC为阴性对照；scFv为筛选获得的阳性克隆；
图3为重组真核表达载体pCMV-HA-scFv的构建过程和质粒图谱；
图4为scFv和pCMV-HA质粒的电泳图；
图中：M为5000bp DNAladdermarker；1为scFv基因片段；2为pCMV-HA质粒；
图5为Westernblot分析pCMV-HA-scFv在Vero-E6细胞中的表达图；
图中：M为蛋白质预染Marker；1为转染pCMV-HA-scFv的细胞裂解液；2为转染pCMV-HA的细胞裂解液；
图6为RT-qPCR分析单链抗体对猪流行性腹泻病毒的抑制效果图；
图中：scFv+PEDV为转染pCMV-HA-scFv以后24h，感染PEDV病毒组；Vector+PEDV为转染pCMV-HA以后24h，感染PEDV病毒组；PEDV为只感染病毒组；图中数据均以平均值±标准误表示(n＝3)；***P<0.001。
具体实施方式
实施例1
猪源性抗猪流行性腹泻病毒N蛋白的单链抗体库的构建，具体包括：
步骤1、用重组表达的猪流行性腹泻病毒N蛋白免疫猪，间接ELISA检测血清抗体效价达到1:64000时，取猪的脾脏组织，用Trizol法(TRIzol试剂购自Invitrogen公司)提取总RNA。以提取的总RNA为模版，采用Oligo primer，根据反转录试剂盒(反转录cDNA合成试剂盒购自TaKaRa公司)的产品说明操作步骤，合成cDNA。
步骤2、分析已发表文献中的猪抗体编码基因的可变区序列，根据序列设计扩增抗体重链可变区和轻链可变区的引物，如表1)，其中VH-B和VH-F用于扩增VH区；VLκ-B1、VLκ-B2、VLκ-B3和VLκ-F用于扩增VLκ区；VLλ-B和VLλ-F用于扩增VLλ区；Overlap-B1和Overlap-F1、Overlap-B2和Overlap-F2、Overlap-B3和Overlap-F3、Overlap-λ-B和Overlap-λ-F用于合成延伸中间连接肽Linker序列，该序列的N端和C端分别与VH和VL有20bp左右的重叠；VH-B-NcoI在VH的基础上加入酶切位点NcoI，VLκ-F-NotI和VLλ-F-NotI分别在VLκ-F和VLλ-F的基础上加入酶切位点NotI(酶切位点和Linker序列在表1中分别用下划线和加粗字体标示出)。引物由生工生物工程(上海)股份有限公司合成。
表1扩增抗体可变区的引物及其扩增片段大小
表1中注：下划线代表Nco I或Not I酶切位点，加粗代表中间连接肽序列。
步骤3、VH和VL基因的扩增以cDNA为模版，VH-B和VH-F用于扩增VH基因；VLκ-B1、VLκ-B2、VLκ-B3和VLκ-F用于扩增VLκ基因；VLλ-B和VLλ-F用于扩增VLλ基因。PCR反应体系为25μL：2×PCRmix 12.5μL，模版cDNA 2μL，上下游引物(25μM)各1μL，ddH2O 8.5μL。扩增程序如下：95℃预变性5min；95℃变性40s，55℃退火40s，72℃延伸1min，30个循环；最后72℃延伸10min。1.5％琼脂糖凝胶电泳鉴定产物并回收目的基因(根据Thermo公司提供的胶回收说明书操作)。
步骤4、scFv基因的获得Overlap-B1和Overlap-F1、Overlap-B2和Overlap-F2、Overlap-B3和Overlap-F3、Overlap-λ-B和Overlap-λ-F用于合成N端和C端分别与VH和VL有20bp左右重叠的延伸中间连接肽Linker序列；然后以VLκ基因和延伸Linker片段为模板，Overlap-Bprimer和VLκ-F为引物扩增Linker-VLκ目的片段，以VLλ基因和延伸Linker片段为模板，Overlap-Bprimer和VLλ-F为引物扩增Linker-VLλ目的片段。扩增产物经1.5％琼脂糖凝胶电泳鉴定后回收目的片段。以VH基因和Linker-VLκ片段或VH基因和Linker-VLλ片段为模板，VH-B-NcoI和VLκ-F-NotI或VLλ-F-NotI为引物通过重组链延伸反应(SOE-PCR)将VH和VL基因通过Linker序列连接为scFv基因，并加入NcoI和NotI酶切位点，如图1所示。
步骤5、猪源性scFv单链抗体原始文库的构建根据(J.萨姆布鲁克等主编的《分子克隆实验指南》)分子克隆方法，将scFv基因和pOPE101-XP载体分别经NcoI和NotI双酶切后，琼脂糖凝胶电泳并用凝胶回收试剂盒回收酶切产物。将scFv基因插入pOPE101-XP载体，构建重组表达质粒，并将其转化E.coli JM109感受态细胞(北京全式金生物技术有限公司)，多次转化，构建猪源性单链抗体原始文库。从库中取一定量的菌液进行10倍梯度稀释后涂布2YT-A固体培养平板，计算库容量；随机挑取单克隆，通过菌落PCR计算其阳性率，菌落PCR验证正确的克隆进行BstNI单酶切和DNA测序分析来确定文库的多样性。
实施例2
猪源性抗猪流行性腹泻病毒N蛋白的单链抗体的间接ELISA筛选，具体为：将纯化的重组表达的猪流行性腹泻病毒N蛋白在96孔板中4℃包被过夜；96孔板中用含4％BSA的封闭液37℃封闭2h；PBST缓冲液洗3次，向96孔板的每孔加入提取的菌落的周质腔蛋白，37℃反应2h；PBST缓冲液洗3次，加anti-Myctag鼠源单克隆抗体100μL(1:3000稀释)，37℃反应2h；PBST缓冲液洗3次，加HRP标记的羊抗鼠IgG(H+L)100μL(1:6000稀释)，37℃反应1h；PBST缓冲液洗3次，加TMB显色液，避光15min；加2mol/L硫酸终止反应，酶标仪读取OD450值。设空质粒提取的周质腔蛋白为阴性对照组。以P/N(P为阳性孔的OD450值，N为阴性孔的OD450值)表示，P/N≥2.1为阳性；1.5≤P/N＜2.1为可疑；P/N＜1.5为阴性，如图2所示。根据(姚火春主编《兽医微生物学实验指导》)。
实施例3
重组scFv序列分析，具体为：对获得的阳性克隆的单链抗体编码基因进行DNA测序，证明其由723个核苷酸及据此推测的241个氨基酸组成，所述核苷酸序列如SEQ ID No.4所示，所述氨基酸序列如SEQ ID No.3所示。
实施例4
重组真核表达质粒pCMV-HA-scFv的转染，具体包括：
步骤1、无内毒素质粒的提取：采用Omega Bio-Tek公司的无内毒素质粒小量提取试剂盒，详细操作步骤为：将含有目的质粒的克隆接种于含有相应抗生素的液体培养基中，37℃培养过夜；5,000×g离心8min，弃掉上清；加500μL Solution I/RNase A重悬菌体转移至离心管中；向离心管中加500μL Solution II，温和颠倒离心管，室温放置3min；加250μL预冷的N3Buffer，温和颠倒离心管，至有白色絮状物形成；13,000×g离心10min，将上清转移到新的离心管中；向离心管中加入0.1倍体积的ETR Solution，温和颠倒混匀，冰上静置10min；42℃孵育5min，混合液又变浑浊；12,000×g离心3min，混合液分层，将上层转移到新的离心管中，向离心管中加0.5倍体积无水乙醇，颠倒混匀，静置2min；将
DNA结合柱放于收集管上，转移混合液至结合柱中，10,000×g离心1min，弃掉废液，直到所有混合液都滤过结合柱；向柱中加500μL的HBC Buffer，13,000×g离心1min，弃掉废液；向柱中加700μL的DNA Wash Buffer，13,000×g离心1min，弃掉废液，用DNAWash Buffer再洗一遍；空柱子13,000×g离心2min；把结合柱放于新的离心管上，向柱基质上加60-100μL灭菌去离子水，静置1-2min，13,000×g离心1min；将离心得到的DNA溶液重新加到柱子上，静置1-2min，13,000×g离心1min，收集管中的DNA溶液，即为质粒；放于-20℃保存备用。
步骤2、重组真核表达质粒pCMV-HA-scFv的构建和测序验证：构建过程如图3所示，pCMV-HA和scFv经过XhoI和NotI限制性内切酶酶切，电泳结果如图4所示，将回收产物用T4连接酶连接，转化DH5α，挑取单菌落，经过菌液PCR鉴定阳性克隆，提取质粒；将获得的重组真核表达质粒pCMV-HA-scFv进行DNA测序验证，测序结果表明scFv序列与SEQ ID No.4所示序列一致，证明重组真核表达质粒pCMV-HA-scFv构建成功。DNA测序公司为铂尚生物技术(上海)有限公司。
步骤3、重组真核表达质粒pCMV-HA-scFv转染细胞：将Vero-E6细胞培养至80％-90％融合度，按照1:3的比例接种至6孔板中，待孔中细胞生长至80％融合度，进行质粒转染，试剂为Lipofectamine 3000Transfection Reagent，具体操作步骤为：取两个离心管，各加入125μLOpti-MEM I培养基；吸取5μL Lipofectamine 3000试剂加到一份125μL Opti-MEM I培养基中，温和混匀，将5μL P3000试剂和2.5μg无内毒素的重组真核表达质粒pCMV-HA-scFv或pCMV-HA加到另一份125μL Opti-MEM I培养基中，温和混匀；静置5min；将质粒和P3000试剂全部加到Lipofectamine 3000试剂中，温和混匀；静置孵育20min；将6孔板中的培养液吸出，PBS清洗1次，然后每孔加2.25mL的Opti-MEM I培养基；将静置后的混合液轻轻滴入孔内，将6孔板放于37℃、5％CO2的细胞培养箱中培养。
实施例5
Western blot检测重组真核表达质粒pCMV-HA-scFv的转染效果，即：重组真核表达质粒pCMV-HA-scFv转染细胞48h后，PBS清洗1次，加250μL的RIPA裂解液(含1mM PMSF)裂解细胞，收集裂解液；4℃，13,000rpm离心5min，将上清转移至离心管中，放于-20℃保存。通过Western blot检测单链抗体在细胞内的表达，具体包括：
步骤1)制作分离胶和浓缩胶；
步骤2)每孔上样10μL，一份为转染重组真核表达质粒pCMV-HA-scFv的细胞裂解液，另一份为转染真核表达质粒pCMV-HA的细胞裂解液，作为阴性对照；
步骤3)电泳：样品在浓缩胶中电泳时，电压为80V，进入分离胶中电泳后，电压为120V；
步骤4)转膜：取出胶板，切掉浓缩胶，量剩余胶块的尺寸，剪相同大小的NC膜，将胶和膜放入转膜液中浸湿，从下到上的摆放顺序为：黑色夹板、滤纸、胶、NC膜、滤纸、白色夹板，将夹板放入电泳槽中，恒流转膜；
步骤5)封闭：将NC膜放入5％脱脂奶粉封闭液中，室温封闭1h；
步骤6)TBST缓冲液洗3次，5min/次；
步骤7)一抗孵育：将NC膜用anti-His鼠源单克隆抗体(用5％脱脂奶粉按1:4000稀释)孵育，4℃过夜；
步骤8)TBST缓冲液洗3次，5min/次；
步骤9)二抗孵育：将NC膜用HRP标记的山羊抗小鼠IgG(H+L)(用5％脱脂奶粉按1:5000稀释)孵育，室温1h；
步骤10)TBST缓冲液洗3次，5min/次；
步骤11)显影：将化学发光试剂盒中的A液和B液等体积混匀，均匀滴在NC膜上，避光2min，然后将膜放于Tanon 5200全自动化学发光系统的平板上，采集图像。结果显示重组真核表达质粒pCMV-HA-scFv转染成功，单链抗体在细胞中大量表达，如图5所示。
实施例6
抗猪流行性腹泻病毒N蛋白的真核表达单链抗体对猪流行性腹泻病毒复制的影响，具体包括：
步骤1、构建重组质粒pMD19-T-PEDV-M
扩增猪流行性腹泻病毒M基因的长度为150bp的片段，构建重组质粒pMD19-T-PEDV-M，用以制作标准曲线。扩增M基因部分片段的引物序列见表2。引物由生工生物工程(上海)股份有限公司合成。
表2扩增猪流行性腹泻病毒M基因部分片段的引物及其扩增片段大小
2、RT-qPCR检测猪流行性腹泻病毒的拷贝数
将Vero-E6细胞按照1:3的比例接种至24孔板，重组真核表达质粒pCMV-HA-scFv或空质粒pCMV-HA转染细胞24h后，感染猪流行性腹泻病毒(MOI＝0.01)，感染24h后，通过RT-qPCR检测猪流行性腹泻病毒在细胞内的复制。转染空质粒pCMV-HA的组为阴性对照组，不转染质粒的组为空白对照组。详细操作步骤为：将处理后的24孔板置于-80℃；反复冻融3次，将各孔内的细胞裂解液转移至RNase-Free离心管中，离心后转移上清到新的RNase-Free离心管中，然后提取病毒RNA。根据反转录试剂盒(反转录cDNA合成试剂盒购自TaKaRa公司)的产品说明操作步骤，合成cDNA。以合成的cDNA为模板，PEDV-M-B和PEDV-M-F为引物扩增M基因片段，检测猪流行性腹泻病毒的拷贝数。试剂盒为TB
Premix Ex TaqTMII Kit(TliRNaseH Plus)，购自Takara Bio公司，PCR反应体系为20μL：TB Green Premix Ex Taq II(Tli RNaseH Plus)(2×)10μL，上下游引物(10μM)各0.8μL，ROX Reference Dye II(50X)0.4μL，模版cDNA 2μL，ddH2O 6μL。扩增程序如下：95℃预变性30s；95℃变性5s，58℃退火和延伸34s，40个循环。计算每个处理的猪流行性腹泻病毒的拷贝数，结果显示抗猪流行性腹泻病毒N蛋白的真核表达单链抗体显著抑制猪流行性腹泻病毒的复制(P<0.001)，如图6所示。
上述具体实施可由本领域技术人员在不背离本发明原理和宗旨的前提下以不同的方式对其进行局部调整，本发明的保护范围以权利要求书为准且不由上述具体实施所限，在其范围内的各个实现方案均受本发明之约束。
序列表
<110> 上海交通大学
<120> 猪源性抗猪流行性腹泻病毒N蛋白的真核表达单链抗体及其制备方法和用途
<130> fnc568e
<141> 2021-08-11
<160> 27
<170> SIPOSequenceListing 1.0
<210> 1
<211> 114
<212> PRT
<213> 猪抗体重链可变区(Artificial Sequence)
<400> 1
Glu Glu Lys Leu Val Glu Ser Gly Gly Gly Leu Val Gln Pro Gly Gly
1 5 10 15
Ser Leu Arg Leu Ser Cys Val Gly Ser Gly Phe Asp Phe Arg Gly Glu
20 25 30
Gly Val Gly Trp Val Arg Gln Ala Pro Gly Lys Gly Leu Glu Trp Leu
35 40 45
Ala Tyr Ile Tyr Ser Gly Gly Ser Thr Tyr Tyr Ala Asp Ser Val Lys
50 55 60
Gly Arg Phe Thr Ile Ser Lys Asp Asp Ser Gln Asn Thr Ala Cys Leu
65 70 75 80
Gln Met Asn Ser Leu Arg Thr Glu Asp Thr Ala Arg Tyr Tyr Cys Phe
85 90 95
Thr Asp Tyr Asp Gly Cys Tyr Gly Ser Cys Gly Pro Gly Val Glu Val
100 105 110
Val Val
<210> 2
<211> 112
<212> PRT
<213> 猪抗体轻链可变区(Artificial Sequence)
<400> 2
Ala Ile Val Leu Thr Gln Thr Pro Leu Ser Leu Ser Val Ser Pro Gly
1 5 10 15
Glu Pro Ala Ser Ile Ser Cys Arg Ser Ser Gln Ser Leu Leu His Ala
20 25 30
Asp Gly Glu Lys His Leu Asn Trp Tyr Leu Gln Lys Pro Gly Gln Ser
35 40 45
Pro Gln Leu Leu Ile Tyr Tyr Ala Thr Asn Arg Ala Ser Gly Val Pro
50 55 60
Asp Arg Phe Thr Gly Ser Gly Ser Gly Thr Asp Phe Thr Leu Lys Ile
65 70 75 80
Ser Arg Val Glu Ala Glu Asp Val Gly Val Tyr Tyr Cys Phe Gln Gly
85 90 95
Leu Gln Ser Pro Tyr Gly Phe Gly Ala Gly Thr Lys Leu Glu Ile Lys
100 105 110
<210> 3
<211> 15
<212> PRT
<213> 中间连接肽(Artificial Sequence)
<400> 3
Gly Gly Gly Gly Ser Gly Gly Gly Gly Ser Gly Gly Gly Gly Ser
1 5 10 15
<210> 4
<211> 723
<212> DNA
<213> 真核表达单链抗体(Artificial Sequence)
<400> 4
gaggagaagc tggtggagtc cggaggaggc ctggtgcagc ctggggggtc tctgagactc 60
tcctgtgtcg gctctggatt cgacttcagg ggtgaaggcg taggctgggt ccgccaggct 120
ccagggaagg ggctggagtg gctggcatat atttatagtg gtggtagcac ctactacgca 180
gactctgtga agggccgatt caccatctcc aaagacgact cccaaaacac ggcctgtctg 240
caaatgaaca gcctgagaac cgaagacacg gcccgctatt actgtttcac agactatgac 300
ggttgctacg ggtcgtgtgg cccaggcgtt gaagtcgtcg tcggtggcgg tggctcgggc 360
ggtggtggat ccggtggcgg cggatctgcc atcgtgctga cccagactcc actctccctg 420
tcagtcagcc ctggagagcc ggcctccatc tcctgcaggt ccagtcagag cctcctacac 480
gctgatggag agaaacattt gaattggtac ctgcagaaac caggccagtc tccacagctc 540
ctgatctatt atgctaccaa cagggcctct ggggtcccag acaggttcac tggcagtgga 600
tcaggcacag atttcaccct gaaaatcagc agggtggagg ctgaggatgt gggagtttat 660
tactgttttc aaggtttaca atctccgtat ggtttcggcg cggggaccaa gctggagatc 720
aaa 723
<210> 5
<211> 241
<212> PRT
<213> 真核表达单链抗体(Artificial Sequence)
<400> 5
Glu Glu Lys Leu Val Glu Ser Gly Gly Gly Leu Val Gln Pro Gly Gly
1 5 10 15
Ser Leu Arg Leu Ser Cys Val Gly Ser Gly Phe Asp Phe Arg Gly Glu
20 25 30
Gly Val Gly Trp Val Arg Gln Ala Pro Gly Lys Gly Leu Glu Trp Leu
35 40 45
Ala Tyr Ile Tyr Ser Gly Gly Ser Thr Tyr Tyr Ala Asp Ser Val Lys
50 55 60
Gly Arg Phe Thr Ile Ser Lys Asp Asp Ser Gln Asn Thr Ala Cys Leu
65 70 75 80
Gln Met Asn Ser Leu Arg Thr Glu Asp Thr Ala Arg Tyr Tyr Cys Phe
85 90 95
Thr Asp Tyr Asp Gly Cys Tyr Gly Ser Cys Gly Pro Gly Val Glu Val
100 105 110
Val Val Gly Gly Gly Gly Ser Gly Gly Gly Gly Ser Gly Gly Gly Gly
115 120 125
Ser Ala Ile Val Leu Thr Gln Thr Pro Leu Ser Leu Ser Val Ser Pro
130 135 140
Gly Glu Pro Ala Ser Ile Ser Cys Arg Ser Ser Gln Ser Leu Leu His
145 150 155 160
Ala Asp Gly Glu Lys His Leu Asn Trp Tyr Leu Gln Lys Pro Gly Gln
165 170 175
Ser Pro Gln Leu Leu Ile Tyr Tyr Ala Thr Asn Arg Ala Ser Gly Val
180 185 190
Pro Asp Arg Phe Thr Gly Ser Gly Ser Gly Thr Asp Phe Thr Leu Lys
195 200 205
Ile Ser Arg Val Glu Ala Glu Asp Val Gly Val Tyr Tyr Cys Phe Gln
210 215 220
Gly Leu Gln Ser Pro Tyr Gly Phe Gly Ala Gly Thr Lys Leu Glu Ile
225 230 235 240
Lys
<210> 6
<211> 23
<212> DNA
<213> VH区扩增引物序列(Artificial Sequence)
<400> 6
gaggwgaagc tggtggagtc ygg 23
<210> 7
<211> 20
<212> DNA
<213> VH-F区扩增引物序列(Artificial Sequence)
<400> 7
acgacgactt caacgcctgg 20
<210> 8
<211> 23
<212> DNA
<213> VLκ-B1区扩增引物序列(Artificial Sequence)
<400> 8
gccatygtgc tgacccagas tcc 23
<210> 9
<211> 23
<212> DNA
<213> VLκ-B2区扩增引物序列(Artificial Sequence)
<400> 9
gagctcgtsa tgacccagtc tcc 23
<210> 10
<211> 23
<212> DNA
<213> VLκ-B3区扩增引物序列(Artificial Sequence)
<400> 10
gagctgcgtg atacacagtc tcc 23
<210> 11
<211> 21
<212> DNA
<213> VLκ-F区扩增引物序列(Artificial Sequence)
<400> 11
tttgakytcc agcttggtcc c 21
<210> 12
<211> 24
<212> DNA
<213> VLλ-B区扩增引物序列(Artificial Sequence)
<400> 12
gattctcaga ctgtgatcca ggag 24
<210> 13
<211> 20
<212> DNA
<213> VLλ-F区扩增引物序列(Artificial Sequence)
<400> 13
gaggacggtc agatgggtcc 20
<210> 14
<211> 89
<212> DNA
<213> Overlap-B1区扩增引物序列(Artificial Sequence)
<400> 14
ccaggcgttg aagtcgtcgt cggtggcggt ggctcgggcg gtggtggatc cggtggcggc 60
ggatctgcca tygtgctgac ccagastcc 89
<210> 15
<211> 89
<212> DNA
<213> Overlap-F1区扩增引物序列(Artificial Sequence)
<400> 15
ggastctggg tcagcacrat ggcagatccg ccgccaccgg atccaccacc gcccgagcca 60
ccgccaccga cgacgacttc aacgcctgg 89
<210> 16
<211> 89
<212> DNA
<213> Overlap-B2区扩增引物序列(Artificial Sequence)
<400> 16
ccaggcgttg aagtcgtcgt cggtggcggt ggctcgggcg gtggtggatc cggtggcggc 60
ggatctgagc tcgtsatgac ccagtctcc 89
<210> 17
<211> 89
<212> DNA
<213> Overlap-F2区扩增引物序列(Artificial Sequence)
<400> 17
ggagactggg tcatsacgag ctcagatccg ccgccaccgg atccaccacc gcccgagcca 60
ccgccaccga cgacgacttc aacgcctgg 89
<210> 18
<211> 89
<212> DNA
<213> Overlap-B3区扩增引物序列(Artificial Sequence)
<400> 18
ccaggcgttg aagtcgtcgt cggtggcggt ggctcgggcg gtggtggatc cggtggcggc 60
ggatctgagc tgcgtgatac acagtctcc 89
<210> 19
<211> 89
<212> DNA
<213> Overlap-F3区扩增引物序列(Artificial Sequence)
<400> 19
ggagactgtg tatcacgcag ctcagatccg ccgccaccgg atccaccacc gcccgagcca 60
ccgccaccga cgacgacttc aacgcctgg 89
<210> 20
<211> 90
<212> DNA
<213> Overlap-λ-B区扩增引物序列(Artificial Sequence)
<400> 20
ccaggcgttg aagtcgtcgt cggtggcggt ggctcgggcg gtggtggatc cggtggcggc 60
ggatctgatt ctcagactgt gatccaggag 90
<210> 21
<211> 90
<212> DNA
<213> Overlap-λ-F区扩增引物序列(Artificial Sequence)
<400> 21
ctcctggatc acagtctgag aatcagatcc gccgccaccg gatccaccac cgcccgagcc 60
accgccaccg acgacgactt caacgcctgg 90
<210> 22
<211> 21
<212> DNA
<213> Overlap-Bprimer区扩增引物序列(Artificial Sequence)
<400> 22
ccaggcgttg aagtcgtcgt c 21
<210> 23
<211> 36
<212> DNA
<213> VH-B-NcoI区扩增引物序列(Artificial Sequence)
<400> 23
tcgatccatg gctgaggwga agctggtgga gtcygg 36
<210> 24
<211> 34
<212> DNA
<213> VLκ-F-NotI区扩增引物序列(Artificial Sequence)
<400> 24
gaactgcggc cgctttgaky tccagcttgg tccc 34
<210> 25
<211> 33
<212> DNA
<213> VLλ-F-NotI区扩增引物序列(Artificial Sequence)
<400> 25
taactgcggc cgcgaggacg gtcagatggg tcc 33
<210> 26
<211> 23
<212> DNA
<213> PEDV-M区扩增引物序列(Artificial Sequence)
<400> 26
ggcgtacagg taagtcaatt gcc 23
<210> 27
<211> 20
<212> DNA
<213> PEDV-M区扩增引物序列(Artificial Sequence)
<400> 27
agctgagtag tcgccgtgtt 20
Claims (4)
1.一种猪源性抗猪流行性腹泻病毒N蛋白的真核表达单链抗体，其特征在于，包含猪源单链抗体片段VH-Linker-VL，其中：猪抗体重链可变区VH的氨基酸序列如SEQ ID No.1所示，猪抗体轻链可变区VL的氨基酸序列如SEQ ID No.2所示，Linker为中间连接肽。
2.根据权利要求1所述的猪源性抗猪流行性腹泻病毒N蛋白的真核表达单链抗体，其特征是，所述的中间连接肽的氨基酸序列，如SEQ ID No.3所示。
3.一种制备权利要求1或2所述猪源性抗猪流行性腹泻病毒N蛋白的单链抗体的方法，其特征在于，通过将猪源单链抗体片段VH-Linker-VL的编码基因插入真核表达质粒pCMV-HA，构建成为重组真核表达质粒pCMV-HA-scFv，将pCMV-HA-scFv转染Vero-E6细胞。
4. 根据权利要求3所述的方法，其特征是，所述的真核表达单链抗体，其核苷酸序列如SEQ ID No.4所示，其氨基酸序列如SEQ ID No.5所示。
Priority Applications (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| CN202110922550.9A CN113683689B (zh) | 2021-08-12 | 2021-08-12 | 猪源性抗猪流行性腹泻病毒n蛋白的真核表达单链抗体及其制备方法和用途 |
Applications Claiming Priority (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| CN202110922550.9A CN113683689B (zh) | 2021-08-12 | 2021-08-12 | 猪源性抗猪流行性腹泻病毒n蛋白的真核表达单链抗体及其制备方法和用途 |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| CN113683689A CN113683689A (zh) | 2021-11-23 |
| CN113683689B true CN113683689B (zh) | 2023-01-03 |
Family
ID=78579515
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CN202110922550.9A Active CN113683689B (zh) | 2021-08-12 | 2021-08-12 | 猪源性抗猪流行性腹泻病毒n蛋白的真核表达单链抗体及其制备方法和用途 |
Country Status (1)
| Country | Link |
|---|---|
| CN (1) | CN113683689B (zh) |
Families Citing this family (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN118344474A (zh) * | 2024-05-28 | 2024-07-16 | 中国农业科学院兰州兽医研究所(中国动物卫生与流行病学中心兰州分中心) | 口蹄疫病毒O型、A型和Asia1型广谱中和性猪源单克隆抗体及其应用 |
Citations (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN106243219A (zh) * | 2016-08-04 | 2016-12-21 | 上海交通大学 | 一种猪源性抗猪流行性腹泻病毒的单链抗体及其制备方法 |
| CN108892723A (zh) * | 2018-07-12 | 2018-11-27 | 内蒙古农业大学 | 用于检测猪流行性腹泻病毒的单域重链抗体、制备方法及应用 |
| CN111171144A (zh) * | 2020-01-20 | 2020-05-19 | 北京中海生物科技有限公司 | 一种抗猪流行性腹泻病毒的抗体制备及应用 |
| CN112175086A (zh) * | 2020-10-13 | 2021-01-05 | 江西农业大学 | 一种抗猪流行性腹泻病毒nsp13蛋白的单克隆抗体及应用 |
-
2021
- 2021-08-12 CN CN202110922550.9A patent/CN113683689B/zh active Active
Patent Citations (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN106243219A (zh) * | 2016-08-04 | 2016-12-21 | 上海交通大学 | 一种猪源性抗猪流行性腹泻病毒的单链抗体及其制备方法 |
| CN108892723A (zh) * | 2018-07-12 | 2018-11-27 | 内蒙古农业大学 | 用于检测猪流行性腹泻病毒的单域重链抗体、制备方法及应用 |
| CN111171144A (zh) * | 2020-01-20 | 2020-05-19 | 北京中海生物科技有限公司 | 一种抗猪流行性腹泻病毒的抗体制备及应用 |
| CN112175086A (zh) * | 2020-10-13 | 2021-01-05 | 江西农业大学 | 一种抗猪流行性腹泻病毒nsp13蛋白的单克隆抗体及应用 |
Also Published As
| Publication number | Publication date |
|---|---|
| CN113683689A (zh) | 2021-11-23 |
Similar Documents
| Publication | Publication Date | Title |
|---|---|---|
| CN113150136B (zh) | 新型冠状病毒n蛋白单克隆抗体的制备 | |
| CN113151187A (zh) | 一株非洲猪瘟病毒单克隆抗体杂交瘤细胞及其应用 | |
| CN107253979B (zh) | 单克隆抗体10b10识别的口蹄疫病毒血清型共享性抗原表位及其应用 | |
| CN113527522B (zh) | 一种新冠病毒三聚体重组蛋白、DNA、mRNA及应用和mRNA疫苗 | |
| CN113683689B (zh) | 猪源性抗猪流行性腹泻病毒n蛋白的真核表达单链抗体及其制备方法和用途 | |
| CN110627908A (zh) | 一种针对猪流行性腹泻具有免疫原性的融合蛋白及其应用 | |
| CN108659124B (zh) | 一种抗猪流行性腹泻病毒的单链抗体及其应用 | |
| CN114790238B (zh) | 猪源性抗猪流行性腹泻病毒n蛋白的真核表达单链抗体及其制备和应用 | |
| CN109306008B (zh) | 一种猪源性抗猪瘟病毒的单链抗体及其制备方法 | |
| CN113549634B (zh) | 编码可溶性hpv58 l1蛋白的基因及其重组质粒的构建与应用 | |
| CN114395568A (zh) | 一种猪流行性腹泻病毒感染性cDNA克隆及其构建方法与应用 | |
| JPH08325291A (ja) | ハンタウィルス抗原蛋白質およびモノクローナル抗体 | |
| CN116836267A (zh) | 检测猫泛白细胞减少症病毒的抗体及其应用 | |
| CN117362417A (zh) | 广谱中和沙贝病毒的抗体及其应用 | |
| CN114213532A (zh) | 高亲和力的抗鸡传染性法氏囊病毒的scFv抗体的制备及其应用 | |
| CN112301044A (zh) | 一种本生烟NbAPX3基因多克隆抗体及其制备方法和应用 | |
| CN114773457B (zh) | 表达猪源性抗猪流行性腹泻病毒n蛋白单链抗体的重组腺病毒及其构建和用途 | |
| CN112390878B (zh) | 一种抗小鹅瘟病毒的单链抗体及其制备方法 | |
| CN114702574B (zh) | 白斑症病毒单链可变区重组抗体及其制备方法和应用 | |
| CN112812177B (zh) | 一种鼠源性抗猪传染性胃肠炎病毒的单链抗体及其制备方法 | |
| CN113201069B (zh) | mcherry或mEOS纳米抗体及其制备方法和应用 | |
| CN111499734B (zh) | 一种抗鸭圆环病毒的单链抗体及其制备方法和应用 | |
| CN112301037B (zh) | 一种本生烟NbPLP基因多克隆抗体及其制备方法和应用 | |
| CN118359711B (zh) | 一种抗脊髓灰质炎病毒1型抗体及其制备方法和用途 | |
| CN114560930B (zh) | 抗新型冠状病毒的广谱中和抗体及其应用 |
Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| PB01 | Publication | ||
| PB01 | Publication | ||
| SE01 | Entry into force of request for substantive examination | ||
| SE01 | Entry into force of request for substantive examination | ||
| GR01 | Patent grant | ||
| GR01 | Patent grant |