CN110691854A - 一种核酸测序方法以及一种核酸测序试剂盒 - Google Patents

一种核酸测序方法以及一种核酸测序试剂盒 Download PDF

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CN110691854A
CN110691854A CN201880034908.0A CN201880034908A CN110691854A CN 110691854 A CN110691854 A CN 110691854A CN 201880034908 A CN201880034908 A CN 201880034908A CN 110691854 A CN110691854 A CN 110691854A
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nucleic acid
sequencing
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CN110691854B (zh
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刘二凯
章文蔚
陈奥
徐崇钧
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BGI Shenzhen Co Ltd
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes

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Abstract

一种核酸测序方法和一种核酸测序试剂盒,所述试剂盒包含核酸探针,连接酶,3'端连接有阻断基团的dNTP,聚合酶,用于切除连接在dNTP的3'端的阻断基团的试剂1,和用于切除核酸探针上未与被测碱基结合的其余核苷酸的试剂2。

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PCT国内申请,说明书已公开。

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  1. PCT国内申请,权利要求书已公开。
CN201880034908.0A 2017-10-25 2018-10-12 一种核酸测序方法以及一种核酸测序试剂盒 Active CN110691854B (zh)

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CN2017110077817 2017-10-25
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PCT/CN2018/109992 WO2019080725A1 (zh) 2017-10-25 2018-10-12 一种核酸测序方法以及一种核酸测序试剂盒

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Cited By (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2023035108A1 (zh) * 2021-09-07 2023-03-16 深圳华大智造科技股份有限公司 一种用于分析靶多核苷酸的序列的方法
WO2023035110A1 (zh) * 2021-09-07 2023-03-16 深圳华大智造科技股份有限公司 一种用于分析靶多核苷酸的序列的方法
WO2023240494A1 (zh) * 2022-06-15 2023-12-21 深圳华大智造科技股份有限公司 测序缓冲液及提高具有可逆阻断基团修饰的dNTP的稳定性的方法

Families Citing this family (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US11993813B2 (en) * 2017-08-31 2024-05-28 Mgi Tech Co., Ltd. Nucleic acid probe and nucleic acid sequencing method
WO2023240564A1 (zh) * 2022-06-16 2023-12-21 深圳华大智造科技股份有限公司 含甘氨酸-NaOH缓冲液的切除试剂及其在核酸测序中的应用
WO2024093421A1 (zh) * 2022-10-31 2024-05-10 深圳市真迈生物科技有限公司 表面处理方法、测序方法和试剂盒

Citations (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20030207295A1 (en) * 1999-04-20 2003-11-06 Kevin Gunderson Detection of nucleic acid reactions on bead arrays
US20090170724A1 (en) * 2001-12-04 2009-07-02 Shankar Balasubramanian Labelled nucleotides
CN101633961A (zh) * 2009-08-14 2010-01-27 东南大学 循环“连接-延伸”基因组测序法
CN101910410A (zh) * 2007-10-23 2010-12-08 斯特拉托斯基因公司 通过间隔进行高通量核酸测序
US20110039259A1 (en) * 2007-10-19 2011-02-17 Jingyue Ju Dna sequence with non-fluorescent nucleotide reversible terminators and cleavable label modified nucleotide terminators
CN102030792A (zh) * 2009-09-29 2011-04-27 韩国科学技术研究院 3'-o-荧光修饰的核苷酸及其用途
CN104520443A (zh) * 2012-06-11 2015-04-15 赛昆塔公司 使用序列标签的序列确定方法
CN104854121A (zh) * 2012-12-20 2015-08-19 霍夫曼-拉罗奇有限公司 用于核酸测序分析的标记的寡核苷酸探针
CN105722850A (zh) * 2013-08-19 2016-06-29 雅培分子公司 核苷酸类似物

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20080242560A1 (en) 2006-11-21 2008-10-02 Gunderson Kevin L Methods for generating amplified nucleic acid arrays
CN108165618B (zh) * 2017-12-08 2021-06-08 东南大学 一种包含核苷酸和3’端可逆封闭核苷酸的dna测序方法

Patent Citations (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20030207295A1 (en) * 1999-04-20 2003-11-06 Kevin Gunderson Detection of nucleic acid reactions on bead arrays
US20090170724A1 (en) * 2001-12-04 2009-07-02 Shankar Balasubramanian Labelled nucleotides
US20110039259A1 (en) * 2007-10-19 2011-02-17 Jingyue Ju Dna sequence with non-fluorescent nucleotide reversible terminators and cleavable label modified nucleotide terminators
CN101910410A (zh) * 2007-10-23 2010-12-08 斯特拉托斯基因公司 通过间隔进行高通量核酸测序
CN101633961A (zh) * 2009-08-14 2010-01-27 东南大学 循环“连接-延伸”基因组测序法
CN102030792A (zh) * 2009-09-29 2011-04-27 韩国科学技术研究院 3'-o-荧光修饰的核苷酸及其用途
CN104520443A (zh) * 2012-06-11 2015-04-15 赛昆塔公司 使用序列标签的序列确定方法
CN104854121A (zh) * 2012-12-20 2015-08-19 霍夫曼-拉罗奇有限公司 用于核酸测序分析的标记的寡核苷酸探针
CN105722850A (zh) * 2013-08-19 2016-06-29 雅培分子公司 核苷酸类似物

Non-Patent Citations (10)

* Cited by examiner, † Cited by third party
Title
ELAINE R.MARDIS: "The impact of next-generation sequencing technology on genetics", 《TRENDS IN GENETICS》 *
ELAINE R.MARDIS: "The impact of next-generation sequencing technology on genetics", 《TRENDS IN GENETICS》, vol. 24, no. 3, 11 February 2008 (2008-02-11), pages 135, XP022498431 *
TAE SEOK SEO ET AL.: "Four-color DNA sequencing by synthesis on a chip using photocleavable fluorescent nucleotides", 《PNAS》 *
TAE SEOK SEO ET AL.: "Four-color DNA sequencing by synthesis on a chip using photocleavable fluorescent nucleotides", 《PNAS》, vol. 103, no. 52, 26 December 2006 (2006-12-26), pages 1 - 5 *
WILHELM J. ANSORGE: "Next-generation DNA sequencing techniques", 《NEW BIOTECHNOLOGY》 *
WILHELM J. ANSORGE: "Next-generation DNA sequencing techniques", 《NEW BIOTECHNOLOGY》, vol. 25, no. 4, 30 April 2009 (2009-04-30), pages 197 *
万敏等: "基于半导体测序的人乳头瘤病毒核酸分型检测技术性能评估", 《中国计划生育学杂志》 *
万敏等: "基于半导体测序的人乳头瘤病毒核酸分型检测技术性能评估", 《中国计划生育学杂志》, vol. 23, no. 09, 15 September 2015 (2015-09-15), pages 41 - 45 *
姜玉等: "用于DNA合成测序的可断裂连接单元研究现状", 《化学进展》 *
姜玉等: "用于DNA合成测序的可断裂连接单元研究现状", 《化学进展》, vol. 28, no. 01, 25 January 2016 (2016-01-25), pages 66 - 74 *

Cited By (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2023035108A1 (zh) * 2021-09-07 2023-03-16 深圳华大智造科技股份有限公司 一种用于分析靶多核苷酸的序列的方法
WO2023035110A1 (zh) * 2021-09-07 2023-03-16 深圳华大智造科技股份有限公司 一种用于分析靶多核苷酸的序列的方法
WO2023240494A1 (zh) * 2022-06-15 2023-12-21 深圳华大智造科技股份有限公司 测序缓冲液及提高具有可逆阻断基团修饰的dNTP的稳定性的方法

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US11649489B2 (en) 2023-05-16
US20210363576A1 (en) 2021-11-25
WO2019080725A1 (zh) 2019-05-02

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