CN107429292B - 底数大于2的指数核酸扩增 - Google Patents
底数大于2的指数核酸扩增 Download PDFInfo
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- CN107429292B CN107429292B CN201580076131.0A CN201580076131A CN107429292B CN 107429292 B CN107429292 B CN 107429292B CN 201580076131 A CN201580076131 A CN 201580076131A CN 107429292 B CN107429292 B CN 107429292B
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/686—Polymerase chain reaction [PCR]
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
- C12Q2525/10—Modifications characterised by
- C12Q2525/155—Modifications characterised by incorporating/generating a new priming site
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
- C12Q2525/10—Modifications characterised by
- C12Q2525/161—Modifications characterised by incorporating target specific and non-target specific sites
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
- C12Q2525/10—Modifications characterised by
- C12Q2525/191—Modifications characterised by incorporating an adaptor
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2531/00—Reactions of nucleic acids characterised by
- C12Q2531/10—Reactions of nucleic acids characterised by the purpose being amplify/increase the copy number of target nucleic acid
- C12Q2531/119—Strand displacement amplification [SDA]
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- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Health & Medical Sciences (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Engineering & Computer Science (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Molecular Biology (AREA)
- Immunology (AREA)
- Microbiology (AREA)
- Biotechnology (AREA)
- Biochemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Biophysics (AREA)
- Analytical Chemistry (AREA)
- Physics & Mathematics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Preparation Of Compounds By Using Micro-Organisms (AREA)
Priority Applications (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| CN202111433266.1A CN114369596B (zh) | 2014-12-15 | 2015-12-15 | 底数大于2的指数核酸扩增 |
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201462092102P | 2014-12-15 | 2014-12-15 | |
| US62/092,102 | 2014-12-15 | ||
| PCT/US2015/065890 WO2016100388A1 (en) | 2014-12-15 | 2015-12-15 | Exponential base-greater-than-2 nucleic acid amplification |
Related Child Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CN202111433266.1A Division CN114369596B (zh) | 2014-12-15 | 2015-12-15 | 底数大于2的指数核酸扩增 |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| CN107429292A CN107429292A (zh) | 2017-12-01 |
| CN107429292B true CN107429292B (zh) | 2021-12-17 |
Family
ID=55071208
Family Applications (2)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CN202111433266.1A Active CN114369596B (zh) | 2014-12-15 | 2015-12-15 | 底数大于2的指数核酸扩增 |
| CN201580076131.0A Active CN107429292B (zh) | 2014-12-15 | 2015-12-15 | 底数大于2的指数核酸扩增 |
Family Applications Before (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CN202111433266.1A Active CN114369596B (zh) | 2014-12-15 | 2015-12-15 | 底数大于2的指数核酸扩增 |
Country Status (11)
| Country | Link |
|---|---|
| US (3) | US10273534B2 (OSRAM) |
| EP (1) | EP3234188B1 (OSRAM) |
| JP (1) | JP6804462B2 (OSRAM) |
| CN (2) | CN114369596B (OSRAM) |
| AU (2) | AU2015362617B2 (OSRAM) |
| CA (1) | CA2971006C (OSRAM) |
| DK (1) | DK3234188T3 (OSRAM) |
| ES (1) | ES2764975T3 (OSRAM) |
| HK (1) | HK1247255A1 (OSRAM) |
| PT (1) | PT3234188T (OSRAM) |
| WO (1) | WO2016100388A1 (OSRAM) |
Families Citing this family (11)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| JP6804462B2 (ja) | 2014-12-15 | 2020-12-23 | セファイド | 指数関数の底が2より大きい核酸増幅 |
| EP3287528A1 (de) * | 2016-08-25 | 2018-02-28 | AGCT GmbH | Verfahren zur amplifikation von nukleinsäuren und kit zu dessen durchführung |
| US20210071243A1 (en) * | 2018-02-26 | 2021-03-11 | Agct Gmbh | Method for primer extension reaction with improved specificity |
| WO2019162530A1 (de) * | 2018-02-26 | 2019-08-29 | Agct Gmbh | Agverfahren zur amplifikation einer nukleinsäure mit verbesserter spezifität |
| EP3759246A1 (de) * | 2018-02-28 | 2021-01-06 | AGCT GmbH | Verfahren zur amplifikation einer nukleinsäure mit verbesserter spezifität |
| AU2019371797A1 (en) * | 2018-10-29 | 2021-05-20 | Cepheid | Exponential base-3 nucleic acid amplification with reduced amplification time using nested overlapping primers |
| US20210403981A1 (en) * | 2020-04-27 | 2021-12-30 | Cepheid | Exponential base-3 and greater nucleic acid amplification with cycling probe |
| US20230250471A1 (en) * | 2020-06-23 | 2023-08-10 | HeimBiotek, Inc. | Composition for sequential polymerase chain reaction, and gene amplification method using same |
| AU2021409723A1 (en) | 2020-12-24 | 2023-06-22 | Integrated Dna Technologies, Inc. | Rnase h2 mutants that reduce primer dimers and off-target amplification in rhpcr-based amplicon sequencing with high-fidelity dna polymerases |
| WO2023158644A1 (en) * | 2022-02-15 | 2023-08-24 | Cepheid | Exponential base-greater-than-base 2 nucleic acid amplification using high- and low-tm primers |
| US20240336961A1 (en) * | 2023-02-23 | 2024-10-10 | Cepheid | USE OF DESTABILIZING NUCLEOTIDE TRIPHOSPHATES TO REDUCE AMPLICON FOLDING AND Tm |
Citations (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2002090538A1 (en) * | 2001-05-08 | 2002-11-14 | Eiken Kagaku Kabushiki Kaisha | Method of synthesizing nucleic acid |
| CN1420928A (zh) * | 1999-11-08 | 2003-05-28 | 荣研化学株式会社 | 合成核酸的方法 |
| WO2004044240A2 (de) * | 2002-11-14 | 2004-05-27 | November Aktiengesellschaft | Verfahren zum parallelen nachweis unterschiedlicher nukleinsäuren |
| KR20130107881A (ko) * | 2012-03-23 | 2013-10-02 | 삼성테크윈 주식회사 | 클라미디아 및 임균 유래의 표적 유전자를 동시에 증폭하고 검출하기 위한 멀티 플렉스 키트 및 이를 이용한 진단 방법 |
Family Cites Families (35)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US4458066A (en) | 1980-02-29 | 1984-07-03 | University Patents, Inc. | Process for preparing polynucleotides |
| US4683195A (en) | 1986-01-30 | 1987-07-28 | Cetus Corporation | Process for amplifying, detecting, and/or-cloning nucleic acid sequences |
| US5449602A (en) | 1988-01-13 | 1995-09-12 | Amoco Corporation | Template-directed photoligation |
| US5494810A (en) | 1990-05-03 | 1996-02-27 | Cornell Research Foundation, Inc. | Thermostable ligase-mediated DNA amplifications system for the detection of genetic disease |
| WO1995012309A1 (en) | 1993-11-05 | 1995-05-11 | THE BOARD OF TRUSTEES OF LELAND STANFORD, JR. UNIVERSITY: Suite 350 | NUCLEIC ACIDS ENCODING [His?5, Trp7, Tyr8¿]-GnRH PREPROHORMONE AND [Ser8]-GnRH PREPROHORMONE AND THEIR USES |
| EP2332958B1 (en) | 1996-02-09 | 2016-04-20 | Cornell Research Foundation, Inc. | Detection of nucleic and sequence differences using the ligase detection reaction with addressable arrays |
| AU730633B2 (en) | 1996-05-29 | 2001-03-08 | Phillip Belgrader | Detection of nucleic acid sequence differences using coupled ligase detection and polymerase chain reactions |
| US6312892B1 (en) | 1996-07-19 | 2001-11-06 | Cornell Research Foundation, Inc. | High fidelity detection of nucleic acid differences by ligase detection reaction |
| US5958349A (en) | 1997-02-28 | 1999-09-28 | Cepheid | Reaction vessel for heat-exchanging chemical processes |
| US6770748B2 (en) | 1997-03-07 | 2004-08-03 | Takeshi Imanishi | Bicyclonucleoside and oligonucleotide analogue |
| US6794499B2 (en) | 1997-09-12 | 2004-09-21 | Exiqon A/S | Oligonucleotide analogues |
| US6027998A (en) | 1997-12-17 | 2000-02-22 | Advanced Micro Devices, Inc. | Method for fully planarized conductive line for a stack gate |
| EP1042061A1 (en) | 1997-12-24 | 2000-10-11 | Cepheid | Integrated fluid manipulation cartridge |
| US6506594B1 (en) | 1999-03-19 | 2003-01-14 | Cornell Res Foundation Inc | Detection of nucleic acid sequence differences using the ligase detection reaction with addressable arrays |
| US6818185B1 (en) | 1999-05-28 | 2004-11-16 | Cepheid | Cartridge for conducting a chemical reaction |
| DE60014676T2 (de) | 1999-05-28 | 2005-11-17 | Cepheid, Sunnyvale | Vorrichtung und verfahren zur analyse flüssiger proben |
| US6262490B1 (en) | 1999-11-05 | 2001-07-17 | Advanced Semiconductor Engineering, Inc. | Substrate strip for use in packaging semiconductor chips |
| US6403037B1 (en) | 2000-02-04 | 2002-06-11 | Cepheid | Reaction vessel and temperature control system |
| CA2410950A1 (en) | 2000-05-30 | 2001-12-06 | Hans-Michael Wenz | Methods for detecting target nucleic acids using coupled ligation and amplification |
| US6605451B1 (en) | 2000-06-06 | 2003-08-12 | Xtrana, Inc. | Methods and devices for multiplexing amplification reactions |
| WO2003074724A2 (en) | 2002-03-01 | 2003-09-12 | Integrated Dna Technologies, Inc. | Polynomial amplification of nucleic acids |
| US20040259116A1 (en) | 2003-01-28 | 2004-12-23 | Gorilla Genomics, Inc. | Hairpin primer amplification |
| US8871469B1 (en) | 2004-11-13 | 2014-10-28 | Steven Albert Benner | Self-avoiding molecular recognition systems in DNA priming |
| JP2008029335A (ja) * | 2006-07-03 | 2008-02-14 | Fujifilm Corp | 新規遺伝子増幅法に用いられるプライマーセットおよびキット |
| JP2008048648A (ja) * | 2006-08-23 | 2008-03-06 | Institute Of Physical & Chemical Research | 核酸増幅用プライマーセット及び核酸の増幅方法 |
| WO2008043987A2 (en) | 2006-10-09 | 2008-04-17 | Oxitec Limited | Methods for amplifying and detecting nucleic acid sequences |
| CN101631796B (zh) * | 2007-03-09 | 2013-08-07 | 独立行政法人理化学研究所 | 具有由单核苷或单核苷酸衍生的结构的化合物、核酸、标记物以及核酸检测方法和试剂盒 |
| WO2010027870A2 (en) * | 2008-08-26 | 2010-03-11 | Fluidigm Corporation | Assay methods for increased throughput of samples and/or targets |
| WO2010133972A1 (en) * | 2009-05-22 | 2010-11-25 | Population Genetics Technologies Ltd | Sorting asymmetrically tagged nucleic acids by selective primer extension |
| CN102559928A (zh) * | 2011-12-28 | 2012-07-11 | 中国海洋大学 | 特异性引物组、包含其的试剂盒、使用方法及检测方法 |
| US9074249B2 (en) * | 2012-06-04 | 2015-07-07 | New England Biolabs, Inc. | Detection of amplification products |
| US20140255928A1 (en) | 2013-03-11 | 2014-09-11 | Elitech Holding B.V. | Methods for true isothermal strand displacement amplification |
| JP6804462B2 (ja) | 2014-12-15 | 2020-12-23 | セファイド | 指数関数の底が2より大きい核酸増幅 |
| US20210071243A1 (en) | 2018-02-26 | 2021-03-11 | Agct Gmbh | Method for primer extension reaction with improved specificity |
| AU2019371797A1 (en) | 2018-10-29 | 2021-05-20 | Cepheid | Exponential base-3 nucleic acid amplification with reduced amplification time using nested overlapping primers |
-
2015
- 2015-12-15 JP JP2017550468A patent/JP6804462B2/ja active Active
- 2015-12-15 HK HK18106922.0A patent/HK1247255A1/zh unknown
- 2015-12-15 EP EP15820756.3A patent/EP3234188B1/en active Active
- 2015-12-15 PT PT158207563T patent/PT3234188T/pt unknown
- 2015-12-15 CA CA2971006A patent/CA2971006C/en active Active
- 2015-12-15 AU AU2015362617A patent/AU2015362617B2/en active Active
- 2015-12-15 CN CN202111433266.1A patent/CN114369596B/zh active Active
- 2015-12-15 CN CN201580076131.0A patent/CN107429292B/zh active Active
- 2015-12-15 DK DK15820756.3T patent/DK3234188T3/da active
- 2015-12-15 US US15/535,009 patent/US10273534B2/en active Active
- 2015-12-15 WO PCT/US2015/065890 patent/WO2016100388A1/en not_active Ceased
- 2015-12-15 ES ES15820756T patent/ES2764975T3/es active Active
-
2019
- 2019-03-20 US US16/359,947 patent/US11028434B2/en active Active
-
2021
- 2021-05-03 US US17/306,761 patent/US11952621B2/en active Active
-
2022
- 2022-05-25 AU AU2022203553A patent/AU2022203553B2/en active Active
Patent Citations (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN1420928A (zh) * | 1999-11-08 | 2003-05-28 | 荣研化学株式会社 | 合成核酸的方法 |
| WO2002090538A1 (en) * | 2001-05-08 | 2002-11-14 | Eiken Kagaku Kabushiki Kaisha | Method of synthesizing nucleic acid |
| WO2004044240A2 (de) * | 2002-11-14 | 2004-05-27 | November Aktiengesellschaft | Verfahren zum parallelen nachweis unterschiedlicher nukleinsäuren |
| KR20130107881A (ko) * | 2012-03-23 | 2013-10-02 | 삼성테크윈 주식회사 | 클라미디아 및 임균 유래의 표적 유전자를 동시에 증폭하고 검출하기 위한 멀티 플렉스 키트 및 이를 이용한 진단 방법 |
Non-Patent Citations (3)
| Title |
|---|
| Cross Priming Amplification: Mechanism and Optimization for Isothermal DNA Amplification;Gaolian Xu等;《SCIENTIFIC REPORTS》;20120203;第2卷(第246期);第1-7页 * |
| Polymerase chain displacement reaction;Claire L. Harris;《BioTechniques》;20130228;第54卷(第2期);第93-97页 * |
| Real-time colorimetric detection of target DNA using isothermal target and signaling probe amplification and gold nanoparticle cross-linking assay;Cheulhee Jung等;《Biosensors and Bioelectronics》;20110115;第26卷(第5期);第1953-1958页 * |
Also Published As
| Publication number | Publication date |
|---|---|
| CA2971006C (en) | 2024-05-21 |
| HK1247255A1 (zh) | 2018-09-21 |
| US20210395797A1 (en) | 2021-12-23 |
| PT3234188T (pt) | 2020-01-16 |
| DK3234188T3 (da) | 2020-01-20 |
| CN114369596A (zh) | 2022-04-19 |
| US20180066304A1 (en) | 2018-03-08 |
| ES2764975T3 (es) | 2020-06-05 |
| CN114369596B (zh) | 2025-07-08 |
| EP3234188B1 (en) | 2019-10-23 |
| AU2022203553A1 (en) | 2022-06-16 |
| AU2015362617B2 (en) | 2022-03-03 |
| JP6804462B2 (ja) | 2020-12-23 |
| CN107429292A (zh) | 2017-12-01 |
| CA2971006A1 (en) | 2016-06-23 |
| EP3234188A1 (en) | 2017-10-25 |
| JP2017537658A (ja) | 2017-12-21 |
| WO2016100388A1 (en) | 2016-06-23 |
| US11952621B2 (en) | 2024-04-09 |
| US11028434B2 (en) | 2021-06-08 |
| US20190203266A1 (en) | 2019-07-04 |
| AU2022203553B2 (en) | 2024-08-08 |
| US10273534B2 (en) | 2019-04-30 |
| AU2015362617A1 (en) | 2017-06-29 |
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