CN104487592B - 进行数字pcr的方法 - Google Patents

进行数字pcr的方法 Download PDF

Info

Publication number
CN104487592B
CN104487592B CN201380028515.6A CN201380028515A CN104487592B CN 104487592 B CN104487592 B CN 104487592B CN 201380028515 A CN201380028515 A CN 201380028515A CN 104487592 B CN104487592 B CN 104487592B
Authority
CN
China
Prior art keywords
sample
nucleic acid
target nucleic
amplification
ion concentration
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Expired - Fee Related
Application number
CN201380028515.6A
Other languages
English (en)
Chinese (zh)
Other versions
CN104487592A (zh
Inventor
陈才夫
凯西·R·麦克法兰德
小大卫·N·肯斯
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Life Technologies Inc
Original Assignee
Life Technologies Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from PCT/US2013/032598 external-priority patent/WO2013158313A1/en
Application filed by Life Technologies Inc filed Critical Life Technologies Inc
Publication of CN104487592A publication Critical patent/CN104487592A/zh
Application granted granted Critical
Publication of CN104487592B publication Critical patent/CN104487592B/zh
Expired - Fee Related legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/686Polymerase chain reaction [PCR]
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/6851Quantitative amplification
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L7/00Heating or cooling apparatus; Heat insulating devices
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12MAPPARATUS FOR ENZYMOLOGY OR MICROBIOLOGY; APPARATUS FOR CULTURING MICROORGANISMS FOR PRODUCING BIOMASS, FOR GROWING CELLS OR FOR OBTAINING FERMENTATION OR METABOLIC PRODUCTS, i.e. BIOREACTORS OR FERMENTERS
    • C12M1/00Apparatus for enzymology or microbiology
    • C12M1/36Apparatus for enzymology or microbiology including condition or time responsive control, e.g. automatically controlled fermentors
    • C12M1/38Temperature-responsive control
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/6858Allele-specific amplification

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Biochemistry (AREA)
  • Microbiology (AREA)
  • Genetics & Genomics (AREA)
  • General Health & Medical Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Analytical Chemistry (AREA)
  • Molecular Biology (AREA)
  • Biophysics (AREA)
  • Immunology (AREA)
  • Clinical Laboratory Science (AREA)
  • Medicinal Chemistry (AREA)
  • Biomedical Technology (AREA)
  • Sustainable Development (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
CN201380028515.6A 2012-04-19 2013-04-19 进行数字pcr的方法 Expired - Fee Related CN104487592B (zh)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US201261635584P 2012-04-19 2012-04-19
US61/635,584 2012-04-19
PCT/US2013/032598 WO2013158313A1 (en) 2012-04-19 2013-03-15 Nucleic acid amplification
USPCT/US2013/032598 2013-03-15
PCT/US2013/037352 WO2013158982A1 (en) 2012-04-19 2013-04-19 Method of performing digital pcr

Publications (2)

Publication Number Publication Date
CN104487592A CN104487592A (zh) 2015-04-01
CN104487592B true CN104487592B (zh) 2018-08-28

Family

ID=49384101

Family Applications (1)

Application Number Title Priority Date Filing Date
CN201380028515.6A Expired - Fee Related CN104487592B (zh) 2012-04-19 2013-04-19 进行数字pcr的方法

Country Status (8)

Country Link
US (2) US10030262B2 (enExample)
EP (1) EP2839029B1 (enExample)
KR (1) KR20150011359A (enExample)
CN (1) CN104487592B (enExample)
AU (1) AU2013249123A1 (enExample)
IN (1) IN2014DN09784A (enExample)
RU (1) RU2014146286A (enExample)
WO (1) WO2013158982A1 (enExample)

Families Citing this family (25)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2017059049A1 (en) * 2015-09-29 2017-04-06 Life Technologies Corporation Systems and methods for performing digital pcr
WO2017169192A1 (ja) * 2016-03-28 2017-10-05 富士フイルム株式会社 Pcr用容器
WO2017196676A1 (en) * 2016-05-10 2017-11-16 Life Technologies Corporation Metal chelation post incorporation detection methods
EP3299471B1 (en) * 2016-09-23 2019-10-23 Roche Diagniostics GmbH Methods for determining the amount of a nucleic acid of interest in an unprocessed sample
CA3046680A1 (en) 2016-12-19 2018-06-28 Quantum-Si Incorporated Loading molecules into sample wells for analysis
CN106754312B (zh) * 2017-01-03 2025-01-28 京东方科技集团股份有限公司 基因测序芯片、基因测序设备及基因测序方法
CN106497774A (zh) * 2017-01-03 2017-03-15 京东方科技集团股份有限公司 基因测序芯片、基因测序设备及基因测序方法
US20180318839A1 (en) * 2017-05-03 2018-11-08 Lifeos Genomics Corporation Incubation Device Having Rotary Mechanism
WO2018204810A1 (en) 2017-05-05 2018-11-08 Quantum-Si Incorporated Substrates having modified surface reactivity and antifouling properties in biological reactions
JP6921638B2 (ja) 2017-06-16 2021-08-18 株式会社東芝 核酸検出定量方法、チップ、アッセイキット、核酸検出定量装置及びプログラム
CN109504745A (zh) * 2017-09-12 2019-03-22 莱弗斯基因股份有限公司 分析样品中多重目标核酸检测方法
CN107385103B (zh) * 2017-09-18 2023-04-07 星源智(珠海)生物科技有限公司 一种非纯化核酸扩增方法及装置
CN110819523B (zh) 2018-08-13 2023-08-29 上海新微技术研发中心有限公司 一种数字pcr系统及数字pcr液滴形成方法
CN110819522B (zh) 2018-08-13 2023-09-22 上海新微技术研发中心有限公司 一种数字pcr系统及数字pcr液滴形成方法
CN111349555B (zh) * 2018-12-21 2023-07-18 成都万众壹芯生物科技有限公司 一种基于微孔阵列芯片的数字pcr扩增装置及其使用方法
KR20210138017A (ko) 2019-02-11 2021-11-18 울티마 제노믹스, 인크. 핵산 분석 방법
CN112239719A (zh) * 2019-07-19 2021-01-19 成都万众壹芯生物科技有限公司 基于微孔阵列芯片的数字pcr扩增装置和利用其进行扩增的方法
AU2020364058A1 (en) 2019-10-11 2022-05-26 Quantum-Si Incorporated Surface modification in the vapor phase
WO2021112841A1 (en) * 2019-12-04 2021-06-10 Hewlett-Packard Development Company, L.P. Sorting a droplet including a biologic sample
KR102395365B1 (ko) * 2020-02-10 2022-05-10 한국과학기술연구원 소수성 플레이트 상에 배열된 복수의 하이드로젤 미세입자를 포함하는 pcr용 반응 칩
CN111500408B (zh) * 2020-04-24 2022-03-22 浙江大学 在全封闭条件下进行核酸分析的试剂盒、装置及分析方法
US12296344B2 (en) 2020-11-23 2025-05-13 Frank Leo Spangler Transparent heating elements for polymerase chain reaction devices
WO2022259182A1 (en) 2021-06-09 2022-12-15 Ecole Polytechnique Federale De Lausanne (Epfl) Device to carry out semiconductor-based diagnostics
KR102537348B1 (ko) * 2022-08-04 2023-05-30 한국기계연구원 디지털 pcr 분석용 기판 및 이의 제작방법
KR102819404B1 (ko) * 2022-08-31 2025-06-13 압티지엠제이 주식회사 Pcr을 위한 열 발생 장치 및 그 방법

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN101743319A (zh) * 2007-03-02 2010-06-16 Dna电子有限公司 使用固态pH传感器的qPCR

Family Cites Families (16)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6413792B1 (en) 2000-04-24 2002-07-02 Eagle Research Development, Llc Ultra-fast nucleic acid sequencing device and a method for making and using the same
US7399590B2 (en) 2002-02-21 2008-07-15 Asm Scientific, Inc. Recombinase polymerase amplification
US8030000B2 (en) 2002-02-21 2011-10-04 Alere San Diego, Inc. Recombinase polymerase amplification
JP5026958B2 (ja) 2004-06-01 2012-09-19 アリーア サン ディエゴ, インコーポレイテッド リコンビナーゼポリメラーゼ増幅
EP2021503A1 (en) 2006-03-17 2009-02-11 Solexa Ltd. Isothermal methods for creating clonal single molecule arrays
AU2007334393A1 (en) * 2006-12-14 2008-06-26 Life Technologies Corporation Methods and apparatus for measuring analytes using large scale FET arrays
US7932034B2 (en) 2006-12-20 2011-04-26 The Board Of Trustees Of The Leland Stanford Junior University Heat and pH measurement for sequencing of DNA
US20090053719A1 (en) * 2007-08-03 2009-02-26 The Chinese University Of Hong Kong Analysis of nucleic acids by digital pcr
US20090286286A1 (en) 2007-11-06 2009-11-19 Ambergen , Inc. Methods for controlling amplification
US20090171078A1 (en) 2007-11-20 2009-07-02 Applied Biosystems Inc. Method of sequencing nucleic acids using elaborated nucleotide phosphorotiolate compounds
US20100301398A1 (en) 2009-05-29 2010-12-02 Ion Torrent Systems Incorporated Methods and apparatus for measuring analytes
US8759037B2 (en) 2010-02-23 2014-06-24 Illumina Cambridge Limited Amplification methods to minimise sequence specific bias
AU2011220536B2 (en) 2010-02-26 2012-05-24 Life Technologies Corporation Modified proteins and methods of making and using same
US9618475B2 (en) * 2010-09-15 2017-04-11 Life Technologies Corporation Methods and apparatus for measuring analytes
CN110079588B (zh) 2010-12-17 2024-03-15 生命技术公司 用于核酸扩增的方法、组合物、系统、仪器和试剂盒
DE102011054101A1 (de) 2011-09-30 2013-04-04 Albert-Ludwigs-Universität Freiburg Verfahren zur räumlichen Anordnung von Probenfragmenten zur Amplifikation und Immobilisierung für weitere Derivatisierungen

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN101743319A (zh) * 2007-03-02 2010-06-16 Dna电子有限公司 使用固态pH传感器的qPCR

Also Published As

Publication number Publication date
US10030262B2 (en) 2018-07-24
WO2013158982A1 (en) 2013-10-24
CN104487592A (zh) 2015-04-01
US20180327813A1 (en) 2018-11-15
US20150099644A1 (en) 2015-04-09
KR20150011359A (ko) 2015-01-30
AU2013249123A1 (en) 2014-12-11
RU2014146286A (ru) 2016-06-10
EP2839029A1 (en) 2015-02-25
IN2014DN09784A (enExample) 2015-07-31
EP2839029B1 (en) 2017-11-15

Similar Documents

Publication Publication Date Title
CN104487592B (zh) 进行数字pcr的方法
CN107532128B (zh) 使用数字微流体的数字pcr系统和方法
Sundberg et al. Spinning disk platform for microfluidic digital polymerase chain reaction
JP5368321B2 (ja) 固相pH検出を用いたqPCR
US10052632B2 (en) Channels with cross-sectional thermal gradients
EP2251435B1 (en) Sensing apparatus for monitoring nucleic acid amplification, using an ion-sensitive field effect transistor (ISFET) for pH sensing
US7888015B2 (en) qPCR using solid-state sensing
JP5494480B2 (ja) 集積リアルタイムce検出を用いるマイクロチップ大容量pcr
WO2014145760A1 (en) Droplet generator with collection tube
İnce et al. Micro-polymerase chain reaction for point-of-care detection and beyond: a review microfluidics and nanofluidics
KR20060093063A (ko) 화학 증폭 반응용 거대 다공성 지지체
Shi et al. Real-time PCR of single bacterial cells on an array of adhering droplets
EP3353323B1 (en) Systems and methods for analysis of nucleic acids
EP3338889A1 (en) Combined extraction and pcr systems
Taylor et al. Micro-genetic analysis systems
TW201410871A (zh) 藉由利用動態等位基因特異性雜交技術與微珠微流道結合進行單核苷酸多態性檢測之方法
WO2021112841A1 (en) Sorting a droplet including a biologic sample
Dalton Continuous flow digital PCR for absolute quantification of nucleic acids
HK1254039B (zh) 用於催化性测定的方法和组合物

Legal Events

Date Code Title Description
C06 Publication
PB01 Publication
C10 Entry into substantive examination
SE01 Entry into force of request for substantive examination
GR01 Patent grant
GR01 Patent grant
CF01 Termination of patent right due to non-payment of annual fee
CF01 Termination of patent right due to non-payment of annual fee

Granted publication date: 20180828