CA3143923A1 - Method and kit for detecting target nucleic acid fragment - Google Patents

Method and kit for detecting target nucleic acid fragment Download PDF

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Publication number
CA3143923A1
CA3143923A1 CA3143923A CA3143923A CA3143923A1 CA 3143923 A1 CA3143923 A1 CA 3143923A1 CA 3143923 A CA3143923 A CA 3143923A CA 3143923 A CA3143923 A CA 3143923A CA 3143923 A1 CA3143923 A1 CA 3143923A1
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CA
Canada
Prior art keywords
nucleic acid
acid fragment
target nucleic
protein
crispr
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
CA3143923A
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English (en)
French (fr)
Inventor
Rikiya Watanabe
Osamu Nureki
Hiroshi NISHIMASU
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
RIKEN
Original Assignee
RIKEN
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by RIKEN filed Critical RIKEN
Publication of CA3143923A1 publication Critical patent/CA3143923A1/en
Pending legal-status Critical Current

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/14Hydrolases (3)
    • C12N9/16Hydrolases (3) acting on ester bonds (3.1)
    • C12N9/22Ribonucleases [RNase]; Deoxyribonucleases [DNase]
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6816Hybridisation assays characterised by the detection means
    • C12Q1/6818Hybridisation assays characterised by the detection means involving interaction of two or more labels, e.g. resonant energy transfer
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N11/00Carrier-bound or immobilised enzymes; Carrier-bound or immobilised microbial cells; Preparation thereof
    • C12N11/02Enzymes or microbial cells immobilised on or in an organic carrier
    • C12N11/08Enzymes or microbial cells immobilised on or in an organic carrier the carrier being a synthetic polymer
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2310/00Structure or type of the nucleic acid
    • C12N2310/10Type of nucleic acid
    • C12N2310/20Type of nucleic acid involving clustered regularly interspaced short palindromic repeats [CRISPR]
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6806Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6834Enzymatic or biochemical coupling of nucleic acids to a solid phase
    • C12Q1/6837Enzymatic or biochemical coupling of nucleic acids to a solid phase using probe arrays or probe chips

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Genetics & Genomics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • General Health & Medical Sciences (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Biochemistry (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Immunology (AREA)
  • Biophysics (AREA)
  • Biomedical Technology (AREA)
  • Medicinal Chemistry (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating, Analyzing Materials By Fluorescence Or Luminescence (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Immobilizing And Processing Of Enzymes And Microorganisms (AREA)
CA3143923A 2019-07-04 2020-07-06 Method and kit for detecting target nucleic acid fragment Pending CA3143923A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
JP2019-125564 2019-07-04
JP2019125564 2019-07-04
PCT/JP2020/026371 WO2021002476A1 (ja) 2019-07-04 2020-07-06 標的核酸断片の検出方法及びキット

Publications (1)

Publication Number Publication Date
CA3143923A1 true CA3143923A1 (en) 2021-01-07

Family

ID=74101362

Family Applications (1)

Application Number Title Priority Date Filing Date
CA3143923A Pending CA3143923A1 (en) 2019-07-04 2020-07-06 Method and kit for detecting target nucleic acid fragment

Country Status (6)

Country Link
US (1) US12522859B2 (https=)
EP (1) EP3995833A4 (https=)
JP (1) JP7579577B2 (https=)
CN (1) CN114072520A (https=)
CA (1) CA3143923A1 (https=)
WO (1) WO2021002476A1 (https=)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20230279375A1 (en) * 2021-12-13 2023-09-07 Labsimply, Inc. Signal boost cascade assay

Families Citing this family (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN114072520A (zh) 2019-07-04 2022-02-18 国立研究开发法人理化学研究所 检测靶核酸片段的方法及试剂盒
US20240094199A1 (en) * 2020-12-28 2024-03-21 Riken Method and kit for detecting target nucleic acid fragment
CN113373264B (zh) * 2021-06-10 2022-04-12 安徽医科大学 一种基于CRISPR/Cas系统的新型冠状病毒双靶标快速检测方法及试剂盒
JPWO2023195542A1 (https=) * 2022-04-08 2023-10-12
WO2024072775A1 (en) * 2022-09-26 2024-04-04 The Johns Hopkins University Devices and systems for dna capture
JPWO2024111543A1 (https=) * 2022-11-25 2024-05-30

Family Cites Families (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP3727026B2 (ja) 2003-04-10 2005-12-14 博行 野地 一分子酵素活性検出に用いられるマイクロチャンバと1000fL以下の液滴を調製する方法
WO2008105814A2 (en) * 2006-08-22 2008-09-04 Los Alamos National Security, Llc Miniturized lateral flow device for rapid and sensitive detection of proteins or nucleic acids
EP3101115B1 (en) 2014-01-31 2020-10-21 Toppan Printing Co., Ltd. Biomolecule analysis kit and biomolecule analysis method
US10337051B2 (en) * 2016-06-16 2019-07-02 The Regents Of The University Of California Methods and compositions for detecting a target RNA
CN111479928A (zh) 2017-11-17 2020-07-31 凸版印刷株式会社 靶分子的检测方法
US10253365B1 (en) * 2017-11-22 2019-04-09 The Regents Of The University Of California Type V CRISPR/Cas effector proteins for cleaving ssDNAs and detecting target DNAs
CN111836903A (zh) * 2017-12-22 2020-10-27 博德研究所 基于crispr效应系统的多重诊断
JP2019125564A (ja) 2018-01-19 2019-07-25 株式会社豊田自動織機 蓄電モジュール
CA3119971A1 (en) 2018-11-14 2020-05-22 Pardis SABETI Multiplexing highly evolving viral variants with sherlock
CN114072520A (zh) 2019-07-04 2022-02-18 国立研究开发法人理化学研究所 检测靶核酸片段的方法及试剂盒
US20240094199A1 (en) * 2020-12-28 2024-03-21 Riken Method and kit for detecting target nucleic acid fragment

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20230279375A1 (en) * 2021-12-13 2023-09-07 Labsimply, Inc. Signal boost cascade assay

Also Published As

Publication number Publication date
US20220348993A1 (en) 2022-11-03
US12522859B2 (en) 2026-01-13
JP7579577B2 (ja) 2024-11-08
EP3995833A1 (en) 2022-05-11
CN114072520A (zh) 2022-02-18
JPWO2021002476A1 (https=) 2021-01-07
WO2021002476A1 (ja) 2021-01-07
EP3995833A4 (en) 2023-08-09

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