CA2558515C - Method of enriching and/or separating prokaryotic dna by means of a protein which specifically binds dna containing non-methylated cpg motifs - Google Patents

Method of enriching and/or separating prokaryotic dna by means of a protein which specifically binds dna containing non-methylated cpg motifs Download PDF

Info

Publication number
CA2558515C
CA2558515C CA2558515A CA2558515A CA2558515C CA 2558515 C CA2558515 C CA 2558515C CA 2558515 A CA2558515 A CA 2558515A CA 2558515 A CA2558515 A CA 2558515A CA 2558515 C CA2558515 C CA 2558515C
Authority
CA
Canada
Prior art keywords
dna
protein
methylated
prokaryotic
complex
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Expired - Fee Related
Application number
CA2558515A
Other languages
English (en)
French (fr)
Other versions
CA2558515A1 (en
Inventor
Karl-Hermann Schmidt
Eberhard Straube
Stefan Russwurm
Hans-Peter Deigner
Svea Sachse
Marc Lehmann
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
SIRS Lab GmbH
Original Assignee
SIRS Lab GmbH
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from DE200410010928 external-priority patent/DE102004010928B4/de
Priority claimed from DE200510001889 external-priority patent/DE102005001889B4/de
Application filed by SIRS Lab GmbH filed Critical SIRS Lab GmbH
Publication of CA2558515A1 publication Critical patent/CA2558515A1/en
Application granted granted Critical
Publication of CA2558515C publication Critical patent/CA2558515C/en
Anticipated expiration legal-status Critical
Expired - Fee Related legal-status Critical Current

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1003Extracting or separating nucleic acids from biological samples, e.g. pure separation or isolation methods; Conditions, buffers or apparatuses therefor
    • C12N15/1006Extracting or separating nucleic acids from biological samples, e.g. pure separation or isolation methods; Conditions, buffers or apparatuses therefor by means of a solid support carrier, e.g. particles, polymers
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1003Extracting or separating nucleic acids from biological samples, e.g. pure separation or isolation methods; Conditions, buffers or apparatuses therefor

Landscapes

  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Biomedical Technology (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Molecular Biology (AREA)
  • Plant Pathology (AREA)
  • Biophysics (AREA)
  • Microbiology (AREA)
  • Physics & Mathematics (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Peptides Or Proteins (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)
CA2558515A 2004-03-05 2005-03-02 Method of enriching and/or separating prokaryotic dna by means of a protein which specifically binds dna containing non-methylated cpg motifs Expired - Fee Related CA2558515C (en)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
DE102004010928.1 2004-03-05
DE200410010928 DE102004010928B4 (de) 2004-03-05 2004-03-05 Protein zur Bindung prokaryonter DNA sowie Verfahren zur Trennung und Anreicherung prokaryonter DNA
DE200510001889 DE102005001889B4 (de) 2005-01-14 2005-01-14 Verfahren zur Steigerung der Bindungskapazität und -effizienz eines Proteins, das nicht methylierte CPG-Motive enthaltende DNA spezifisch bindet
DE102005001889.0 2005-01-14
PCT/EP2005/002198 WO2005085440A1 (de) 2004-03-05 2005-03-02 VERFAHREN ZUR ANREICHERUNG UND/ODER ABTRENNUNG VON PROKARYONTER DNA MITTELS EINES PROTEINS, DAS NICHT-METHYLIERTE CpG-MOTIVE ENTHALTENDE DNA SPEZIFISCH BINDET

Publications (2)

Publication Number Publication Date
CA2558515A1 CA2558515A1 (en) 2005-09-15
CA2558515C true CA2558515C (en) 2013-12-03

Family

ID=34921210

Family Applications (1)

Application Number Title Priority Date Filing Date
CA2558515A Expired - Fee Related CA2558515C (en) 2004-03-05 2005-03-02 Method of enriching and/or separating prokaryotic dna by means of a protein which specifically binds dna containing non-methylated cpg motifs

Country Status (8)

Country Link
US (1) US8481262B2 (enExample)
EP (1) EP1723233B1 (enExample)
JP (1) JP4848358B2 (enExample)
AT (1) ATE554167T1 (enExample)
CA (1) CA2558515C (enExample)
DK (1) DK1723233T3 (enExample)
ES (1) ES2384571T3 (enExample)
WO (1) WO2005085440A1 (enExample)

Families Citing this family (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
DE50207801D1 (de) 2002-09-18 2006-09-21 Sirs Lab Gmbh Verfahren zum Nachweis prokaryontischer DNA
DE202005009490U1 (de) * 2005-06-16 2006-10-19 Sirs-Lab Gmbh Vorrichtung zur Anreicherung/Abtrennung von nicht-methylierte CpG-Motive enthaltender DNA
JP5246726B2 (ja) 2006-10-05 2013-07-24 株式会社ジャパンディスプレイウェスト シフトレジスタ回路および表示装置
DE102007041864B4 (de) * 2007-09-04 2012-05-03 Sirs-Lab Gmbh Verfahren zum Nachweis von Bakterien und Pilzen
US9063130B2 (en) 2007-09-11 2015-06-23 Kaneka Corporation Nucleic acid detection method and nucleic acid detection kit
US20090137024A1 (en) * 2007-11-28 2009-05-28 Canon U.S. Life Sciences, Inc. Method of Separating Target DNA from Mixed DNA
AT509622A1 (de) 2010-04-08 2011-10-15 Greiner Bio One Gmbh Verfahren und kit zur trennung viraler und prokaryontischer von eukaryontischen nukleinsäuren
DE102012219142B4 (de) * 2012-10-19 2016-02-25 Analytik Jena Ag Verfahren zum Trennen, Erfassen oder Anreichern von unterschiedlichen DNA-Spezies
DE102012021146A1 (de) 2012-10-25 2014-05-15 Fraunhofer-Gesellschaft zur Förderung der angewandten Forschung e.V. Methode zur spezifischen Isolation von Nukleinsäuren
WO2016034405A1 (en) 2014-09-03 2016-03-10 Siemens Aktiengesellschaft A process for separation of prokaryotic dna from eukaryotic dna in a whole blood sample
WO2020216966A1 (en) * 2019-04-26 2020-10-29 Thermo Fisher Scientific Baltics Uab Isolated nucleic acid binding domains

Family Cites Families (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6239116B1 (en) 1994-07-15 2001-05-29 University Of Iowa Research Foundation Immunostimulatory nucleic acid molecules
CA2224492A1 (en) * 1995-07-28 1997-02-13 Michael E. T. I. Boerrigter A method of and test kit for mutagenesis testing
AU7680300A (en) * 1999-08-18 2001-03-13 Fraunhofer-Gesellschaft Zur Forderung Der Angewandten Forschung E.V. Human dna sequences
JP2002034565A (ja) 2000-07-19 2002-02-05 Japan Science & Technology Corp 細菌dnaを特異的に認識する受容体タンパク質
SE0201257D0 (sv) * 2002-04-25 2002-04-25 Medical Invest In Sweden Ab Improved Separation
GB0215228D0 (en) * 2002-07-01 2002-08-14 Inpharmatica Ltd Protein
DE50207801D1 (de) * 2002-09-18 2006-09-21 Sirs Lab Gmbh Verfahren zum Nachweis prokaryontischer DNA
GB0423991D0 (en) * 2004-10-29 2004-12-01 Univ Edinburgh Applications of nucleic acid fragments

Also Published As

Publication number Publication date
US20080003568A1 (en) 2008-01-03
US8481262B2 (en) 2013-07-09
ES2384571T3 (es) 2012-07-09
WO2005085440A8 (de) 2005-12-15
WO2005085440A1 (de) 2005-09-15
JP4848358B2 (ja) 2011-12-28
ATE554167T1 (de) 2012-05-15
CA2558515A1 (en) 2005-09-15
EP1723233B1 (de) 2012-04-18
JP2007525982A (ja) 2007-09-13
EP1723233A1 (de) 2006-11-22
DK1723233T3 (da) 2012-07-23

Similar Documents

Publication Publication Date Title
US7560228B2 (en) Solid-phase nucleic acid isolation
US6355792B1 (en) Method for isolating and purifying nucleic acids
US8288115B2 (en) Method for enriching a prokaryotic DNA
JP2008510456A (ja) 多官能基コート化固相担体を用いる核酸の単離方法
WO2014063651A1 (zh) 纯化核酸的方法及试剂盒
WO2008150826A1 (en) Modified spin column for simple and rapid plasmid dna extraction
CA2558515C (en) Method of enriching and/or separating prokaryotic dna by means of a protein which specifically binds dna containing non-methylated cpg motifs
US20220112484A1 (en) Methods for co-isolation of nucleic acids and proteins
EP0741141A2 (en) Method of purifying ologonucleotide from biological samples
DE102004010928B4 (de) Protein zur Bindung prokaryonter DNA sowie Verfahren zur Trennung und Anreicherung prokaryonter DNA
CN114846136A (zh) 源自鲎的重组G因子及使用该重组G因子的β-葡聚糖的测定方法
Anant et al. [3] Isolation of low molecular weight DNA from bacteria and animal cells
CN119592714A (zh) 细菌16s扩增试剂盒、检测方法及应用
JP2006246732A (ja) 核酸精製用支持体および精製方法

Legal Events

Date Code Title Description
EEER Examination request
MKLA Lapsed

Effective date: 20180302