AU744929B2 - Detection of nucleic acid polymorphism - Google Patents

Detection of nucleic acid polymorphism Download PDF

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Publication number
AU744929B2
AU744929B2 AU62160/99A AU6216099A AU744929B2 AU 744929 B2 AU744929 B2 AU 744929B2 AU 62160/99 A AU62160/99 A AU 62160/99A AU 6216099 A AU6216099 A AU 6216099A AU 744929 B2 AU744929 B2 AU 744929B2
Authority
AU
Australia
Prior art keywords
duplex
dna
complex
probe
variation
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
AU62160/99A
Other languages
English (en)
Other versions
AU6216099A (en
Inventor
Anthony Joseph Brookes
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Hybaid Ltd
Original Assignee
Hybaid Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Hybaid Ltd filed Critical Hybaid Ltd
Publication of AU6216099A publication Critical patent/AU6216099A/en
Application granted granted Critical
Publication of AU744929B2 publication Critical patent/AU744929B2/en
Anticipated expiration legal-status Critical
Ceased legal-status Critical Current

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Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
AU62160/99A 1998-10-08 1999-10-07 Detection of nucleic acid polymorphism Ceased AU744929B2 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
GBGB9821989.2A GB9821989D0 (en) 1998-10-08 1998-10-08 Detection of nucleic acid polymorphism
GB9821989 1998-10-08
PCT/GB1999/003329 WO2000020633A1 (en) 1998-10-08 1999-10-07 Detection of nucleic acid polymorphism

Publications (2)

Publication Number Publication Date
AU6216099A AU6216099A (en) 2000-04-26
AU744929B2 true AU744929B2 (en) 2002-03-07

Family

ID=10840243

Family Applications (1)

Application Number Title Priority Date Filing Date
AU62160/99A Ceased AU744929B2 (en) 1998-10-08 1999-10-07 Detection of nucleic acid polymorphism

Country Status (8)

Country Link
US (1) US7179589B2 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
EP (1) EP1117832B1 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
JP (1) JP2002526123A (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
AT (1) ATE427999T1 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
AU (1) AU744929B2 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
DE (1) DE69940698D1 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
GB (1) GB9821989D0 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
WO (1) WO2000020633A1 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)

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US6656692B2 (en) 1999-12-21 2003-12-02 Ingeneus Corporation Parallel or antiparallel, homologous or complementary binding of nucleic acids or analogues thereof to form duplex, triplex or quadruplex complexes
US6858390B2 (en) 1998-12-31 2005-02-22 Ingeneus Corporation Aptamers containing sequences of nucleic acid or nucleic acid analogues bound homologously, or in novel complexes
US6420115B1 (en) 1999-12-21 2002-07-16 Ingeneus Corporation Cation mediated triplex hybridization assay
US6403313B1 (en) * 1999-12-21 2002-06-11 Ingeneus Corporation Fluorescent intensity assay for duplex and triplex nucleic acid hybridization solution utilizing fluorescent intercalators
US6900300B1 (en) 2000-09-19 2005-05-31 Ingeneus Corporation Quadruplex DNA and duplex probe systems
US6927027B2 (en) 1999-12-21 2005-08-09 Ingeneus Corporation Nucleic acid multiplex formation
US6924108B2 (en) 1999-12-21 2005-08-02 Ingeneus Corporation Nucleic acid binding enhancement by conjugation with nucleotides, nucleosides, bases and/or their analogues
US7309569B2 (en) 1999-12-21 2007-12-18 Ingeneus, Inc. Parallel or antiparallel, homologous or complementary binding of nucleic acids or analogues thereof to form duplex, triplex or quadruplex complexes
US7052844B2 (en) 1999-12-21 2006-05-30 Ingeneus, Inc. Purification of DS-DNA using heteropolymeric capture probes and a triplex, quadruplex or homologous duplex binding mechanism
US6911536B1 (en) 1999-12-21 2005-06-28 Ingeneus Corporation Triplex and quadruplex catalytic hybridization
US7220541B2 (en) 2000-01-24 2007-05-22 Ingeneus, Inc. Homogeneous assay of biopolymer binding by means of multiple measurements under varied conditions
US6613524B1 (en) 2000-01-24 2003-09-02 Ingeneus Corporation Amperometric affinity assay and electrically stimulated complexes of nucleic acids
US6982147B2 (en) 2000-01-24 2006-01-03 Ingeneus Corporation Apparatus for assaying biopolymer binding by means of multiple measurements under varied conditions
WO2001059144A1 (en) 2000-02-10 2001-08-16 The Penn State Research Foundation Method of analyzing single nucleotide polymorphisms using melting curve and restriction endonuclease digestion
US20020182622A1 (en) * 2001-02-01 2002-12-05 Yusuke Nakamura Method for SNP (single nucleotide polymorphism) typing
AU2003286573B2 (en) 2002-10-23 2009-09-10 Idaho Technology, Inc. Amplicon melting analysis with saturation dyes
WO2004038042A1 (fr) * 2002-10-24 2004-05-06 Ben Gao Methode quadridimensionnelle et appareil de detection d'une paire hybride d'acides nucleiques sur une puce a adn
AU2002368536A1 (en) * 2002-12-27 2004-07-29 Toyo Boseki Kabushiki Kaisha Method of identifying nucleotide polymorphism
WO2004097371A2 (en) * 2003-04-25 2004-11-11 Board Of Regents, The University Of Texas System System and method for the detection of analytes
US9317922B2 (en) 2003-05-16 2016-04-19 Board Of Regents The University Of Texas System Image and part recognition technology
US8288523B2 (en) 2003-09-11 2012-10-16 Ibis Biosciences, Inc. Compositions for use in identification of bacteria
US9657347B2 (en) 2004-04-20 2017-05-23 University of Utah Research Foundation and BioFire Defense, LLC Nucleic acid melting analysis with saturation dyes
JP3916086B2 (ja) * 2004-06-29 2007-05-16 ソニー株式会社 ハイブリダイゼーションなどの相互作用を検出する方法及び検出部、該検出部を備えるバイオアッセイ用基板、ハイブリダイゼーションなどの相互作用を検出する装置、並びに試薬キット
WO2006127609A2 (en) 2005-05-23 2006-11-30 The United States Of America As Represented By The Department Of Veterans Affairs Polymorphism in the macrophage migration inhibitory factor (mif) gene as marker for prostate cancer
US20070072193A1 (en) * 2005-09-27 2007-03-29 Shah Manish M Ligand arrays having controlled feature size, and methods of making and using the same
US20070154892A1 (en) * 2005-12-30 2007-07-05 Simon Wain-Hobson Differential amplification of mutant nucleic acids by PCR in a mixure of nucleic acids
US8057989B2 (en) 2006-02-10 2011-11-15 The University Of Hong Kong Label-free optical sensing and characterization of biomolecules by d8 or d10 metal complexes
US8309304B2 (en) 2006-02-10 2012-11-13 The University Of Hong Kong Label-free optical sensing and characterization of biomolecules by d8 or d10 metal complexes
US7555933B2 (en) 2006-08-01 2009-07-07 Thermo Fisher Scientific Inc. Method and software for detecting vacuum concentrator ends-of-runs
WO2009130797A1 (ja) * 2008-04-22 2009-10-29 東洋鋼鈑株式会社 Abo式血液型を判定するためのプローブセット
WO2009151982A1 (en) * 2008-05-30 2009-12-17 Ibis Biosciences, Inc. Compositions for use in identification of francisella
US8219324B2 (en) * 2008-09-12 2012-07-10 Roche Molecular Systems, Inc. Real-time PCR elbow calling by equation-less algorithm
US20100129796A1 (en) * 2008-11-24 2010-05-27 Micah Halpern Dye probe fluorescence resonance energy transfer genotyping
US8691504B2 (en) 2009-05-26 2014-04-08 Xiamen University Method for detecting variations in nucleic acid sequences
US10176293B2 (en) 2012-10-02 2019-01-08 Roche Molecular Systems, Inc. Universal method to determine real-time PCR cycle threshold values
CN106908655B (zh) * 2017-03-06 2019-06-14 广东顺德工业设计研究院(广东顺德创新设计研究院) 光电信号峰值检测方法与系统

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Publication number Priority date Publication date Assignee Title
EP0478319A1 (en) * 1990-09-28 1992-04-01 Kabushiki Kaisha Toshiba Gene detection method
WO1998036096A1 (en) * 1997-02-14 1998-08-20 E.I. Du Pont De Nemours And Company Detection of double-stranded dna in a homogeneous solution

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US4824776A (en) * 1985-07-25 1989-04-25 Molecular Biosystems, Inc. Method for increasing the sensitivity of nucleic acid hybridization assays
US6048690A (en) * 1991-11-07 2000-04-11 Nanogen, Inc. Methods for electronic fluorescent perturbation for analysis and electronic perturbation catalysis for synthesis
AU3140293A (en) * 1991-11-22 1993-06-15 United States of America, as represented by the Secretary, U.S. Department of Commerce, The Device and method for detection of compounds which intercalate with nucleic acids
US5789167A (en) * 1993-09-10 1998-08-04 Genevue, Inc. Optical detection of position of oligonucleotides on large DNA molecules
JPH09503660A (ja) * 1993-09-23 1997-04-15 ゼネカ・リミテッド エネルギー移動による核酸検出
CA2658290C (en) * 1996-06-04 2012-04-10 University Of Utah Research Foundation Monitoring hybridization during pcr using fluorescent dye specific to double-stranded dna
US6406845B1 (en) * 1997-05-05 2002-06-18 Trustees Of Tuft College Fiber optic biosensor for selectively detecting oligonucleotide species in a mixed fluid sample
GB9725197D0 (en) 1997-11-29 1998-01-28 Secr Defence Detection system
JP2005500513A (ja) * 2000-12-29 2005-01-06 クロマジェン インコーポレーティッド ハイスループットの蛍光の検出のためのスキャニング分光光度計

Patent Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP0478319A1 (en) * 1990-09-28 1992-04-01 Kabushiki Kaisha Toshiba Gene detection method
WO1998036096A1 (en) * 1997-02-14 1998-08-20 E.I. Du Pont De Nemours And Company Detection of double-stranded dna in a homogeneous solution

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
Y GUERABIDE ET AL. ANALYTICAL BIOCHEM 1995 228:208-220 *

Also Published As

Publication number Publication date
AU6216099A (en) 2000-04-26
WO2000020633A1 (en) 2000-04-13
DE69940698D1 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html) 2009-05-20
ATE427999T1 (de) 2009-04-15
EP1117832A1 (en) 2001-07-25
US7179589B2 (en) 2007-02-20
US20010046670A1 (en) 2001-11-29
JP2002526123A (ja) 2002-08-20
EP1117832B1 (en) 2009-04-08
GB9821989D0 (en) 1998-12-02

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Legal Events

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MK6 Application lapsed section 142(2)(f)/reg. 8.3(3) - pct applic. not entering national phase
TH Corrigenda

Free format text: IN VOL 14, NO 29, PAGE(S) 5293-5296 UNDER THE HEADING APPLICATIONS LAPSED, REFUSED OR WITHDRAWN PLEASE DELETE ALL REFERENCE TO APPLICATION NO. 62160/99

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