AU2006234897A1 - Methods and compositions for predicting death from cancer and prostate cancer survival using gene expression signatures - Google Patents

Methods and compositions for predicting death from cancer and prostate cancer survival using gene expression signatures Download PDF

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Publication number
AU2006234897A1
AU2006234897A1 AU2006234897A AU2006234897A AU2006234897A1 AU 2006234897 A1 AU2006234897 A1 AU 2006234897A1 AU 2006234897 A AU2006234897 A AU 2006234897A AU 2006234897 A AU2006234897 A AU 2006234897A AU 2006234897 A1 AU2006234897 A1 AU 2006234897A1
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AU
Australia
Prior art keywords
affymetrix
gene
expression
seq
probe set
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Abandoned
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AU2006234897A
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English (en)
Inventor
Gennadi V. Glinksii
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Sidney Kimmel Cancer Center
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Sidney Kimmel Cancer Center
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Publication date
Application filed by Sidney Kimmel Cancer Center filed Critical Sidney Kimmel Cancer Center
Publication of AU2006234897A1 publication Critical patent/AU2006234897A1/en
Abandoned legal-status Critical Current

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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C12Q1/6886—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/118—Prognosis of disease development
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/158—Expression markers
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/178—Oligonucleotides characterized by their use miRNA, siRNA or ncRNA

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Engineering & Computer Science (AREA)
  • Immunology (AREA)
  • Pathology (AREA)
  • Analytical Chemistry (AREA)
  • Zoology (AREA)
  • Genetics & Genomics (AREA)
  • Wood Science & Technology (AREA)
  • Physics & Mathematics (AREA)
  • Biotechnology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Hospice & Palliative Care (AREA)
  • Biophysics (AREA)
  • Oncology (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
AU2006234897A 2005-03-16 2006-03-16 Methods and compositions for predicting death from cancer and prostate cancer survival using gene expression signatures Abandoned AU2006234897A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US66301405P 2005-03-16 2005-03-16
US60/663,014 2005-03-16
PCT/US2006/009870 WO2006110264A2 (en) 2005-03-16 2006-03-16 Methods and compositions for predicting death from cancer and prostate cancer survival using gene expression signatures

Publications (1)

Publication Number Publication Date
AU2006234897A1 true AU2006234897A1 (en) 2006-10-19

Family

ID=37087482

Family Applications (1)

Application Number Title Priority Date Filing Date
AU2006234897A Abandoned AU2006234897A1 (en) 2005-03-16 2006-03-16 Methods and compositions for predicting death from cancer and prostate cancer survival using gene expression signatures

Country Status (5)

Country Link
US (1) US8349555B2 (https=)
EP (1) EP1874471A4 (https=)
JP (2) JP2008536488A (https=)
AU (1) AU2006234897A1 (https=)
WO (1) WO2006110264A2 (https=)

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US8768629B2 (en) * 2009-02-11 2014-07-01 Caris Mpi, Inc. Molecular profiling of tumors
WO2008058018A2 (en) 2006-11-02 2008-05-15 Mayo Foundation For Medical Education And Research Predicting cancer outcome
DE102007044919A1 (de) * 2007-09-19 2009-04-02 Hefter, Harald, Prof. Dr. med. Dr. rer. nat. Verfahren zur Bestimmung von sekundärem Therapieversagen
WO2009084740A1 (ja) * 2007-12-28 2009-07-09 National University Corporation Nagoya University 肺腺癌患者の術後再発を予測するための方法及び組成物
AU2009253675A1 (en) * 2008-05-28 2009-12-03 Genomedx Biosciences, Inc. Systems and methods for expression-based discrimination of distinct clinical disease states in prostate cancer
US10407731B2 (en) 2008-05-30 2019-09-10 Mayo Foundation For Medical Education And Research Biomarker panels for predicting prostate cancer outcomes
US8227202B2 (en) 2008-07-10 2012-07-24 Nodality, Inc. Methods for diagnosis, prognosis and methods of treatment
WO2010045318A2 (en) * 2008-10-14 2010-04-22 Caris Mpi, Inc. Gene and gene expressed protein targets depicting biomarker patterns and signature sets by tumor type
JP5461959B2 (ja) * 2008-10-31 2014-04-02 株式会社Ｄｎａチップ研究所 神経膠腫予後予測方法、およびそれに用いるキット
WO2010056337A2 (en) 2008-11-12 2010-05-20 Caris Mpi, Inc. Methods and systems of using exosomes for determining phenotypes
EP2433232A1 (en) * 2009-05-20 2012-03-28 Koninklijke Philips Electronics N.V. Biomarkers based on sets of molecular signatures
EP2542696B1 (en) 2010-03-01 2016-09-28 Caris Life Sciences Switzerland Holdings GmbH Biomarkers for theranostics
JP2013526852A (ja) 2010-04-06 2013-06-27 カリス ライフ サイエンシズ ルクセンブルク ホールディングス 疾患に対する循環バイオマーカー
IL243203A (en) 2010-07-27 2017-04-30 Genomic Health Inc Method for using gene expression to determine prognosis of prostate cancer
US20130267443A1 (en) 2010-11-19 2013-10-10 The Regents Of The University Of Michigan ncRNA AND USES THEREOF
WO2013093644A2 (en) * 2011-11-23 2013-06-27 Uti Limited Partnership Expression signature for staging and prognosis of prostate, breast and leukemia cancers
US10513737B2 (en) 2011-12-13 2019-12-24 Decipher Biosciences, Inc. Cancer diagnostics using non-coding transcripts
DK3179393T3 (da) 2012-01-31 2020-07-27 Genomic Health Inc Genexpressionsprofilalgoritme og -test til bestemmelse af prognosen for prostatakræft
EP2885640B1 (en) 2012-08-16 2018-07-18 Genomedx Biosciences, Inc. Prostate cancer prognostics using biomarkers
CA2884737A1 (en) * 2012-08-16 2014-02-20 The Trustees Of Columbia University In The City Of New York Diagnostic markers of indolent prostate cancer
KR101993716B1 (ko) * 2012-09-28 2019-06-27 삼성전자주식회사 카테고리별 진단 모델을 이용한 병변 진단 장치 및 방법
US9687290B2 (en) 2012-10-02 2017-06-27 Covidien Lp Energy-based medical devices
TWI658049B (zh) * 2013-03-12 2019-05-01 腫瘤療法 科學股份有限公司 Ｋｎｔｃ２胜肽及含此胜肽之疫苗
WO2014144476A1 (en) * 2013-03-15 2014-09-18 The Broad Institute, Inc. Methods for the detection of dna-rna proximity in vivo
WO2014210611A1 (en) * 2013-06-28 2014-12-31 Nantomics, Llc Pathway analysis for identification of diagnostic tests
ES2923942T3 (es) 2013-11-06 2022-10-03 Us Health Procedimiento para el subtipado de tipos de linfoma por medio de perfiles de expresión
GB201322034D0 (en) 2013-12-12 2014-01-29 Almac Diagnostics Ltd Prostate cancer classification
FR3017955B1 (fr) * 2014-02-27 2018-04-06 Assistance Publique - Hopitaux De Paris Biomarqueurs diagnostics de la cardiomyopathie du peripartum
WO2016036878A1 (en) * 2014-09-02 2016-03-10 Nodality, Inc. Methods for diagnosis, prognosis and methods of treatment
TWI582240B (zh) * 2015-05-19 2017-05-11 鄭鴻鈞 以基因體預後評估試劑組預測乳癌患者局部區域復發風險及放射治療有效性的方法、用途及裝置
JP6991134B2 (ja) * 2015-10-09 2022-01-12 ガーダント ヘルス， インコーポレイテッド 無細胞ｄｎａを使用する集団ベースの処置レコメンダ
JP7075896B2 (ja) 2016-04-20 2022-05-26 アメリカ合衆国 マントル細胞リンパ腫の評価及びそれに関連する方法
JP6963009B2 (ja) 2016-05-19 2021-11-05 オンコスカー エルエルシーOncoscar Llc 臨床的に難治性の悪性腫瘍の診断及び治療標的化の方法
EP3504348B1 (en) 2016-08-24 2022-12-14 Decipher Biosciences, Inc. Use of genomic signatures to predict responsiveness of patients with prostate cancer to post-operative radiation therapy
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CA3055925A1 (en) 2017-03-09 2018-09-13 Decipher Biosciences, Inc. Subtyping prostate cancer to predict response to hormone therapy
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Also Published As

Publication number Publication date
US20090233279A1 (en) 2009-09-17
JP2008536488A (ja) 2008-09-11
US8349555B2 (en) 2013-01-08
WO2006110264A2 (en) 2006-10-19
EP1874471A2 (en) 2008-01-09
WO2006110264A3 (en) 2007-03-01
EP1874471A4 (en) 2008-12-10
JP2009131278A (ja) 2009-06-18

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MK1 Application lapsed section 142(2)(a) - no request for examination in relevant period