ATE470722T1 - Strategien zur genexpressionsanalyse - Google Patents
Strategien zur genexpressionsanalyseInfo
- Publication number
- ATE470722T1 ATE470722T1 AT03765615T AT03765615T ATE470722T1 AT E470722 T1 ATE470722 T1 AT E470722T1 AT 03765615 T AT03765615 T AT 03765615T AT 03765615 T AT03765615 T AT 03765615T AT E470722 T1 ATE470722 T1 AT E470722T1
- Authority
- AT
- Austria
- Prior art keywords
- strategies
- gene expression
- expression analysis
- compound
- members
- Prior art date
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6809—Methods for determination or identification of nucleic acids involving differential detection
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/136—Screening for pharmacological compounds
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/158—Expression markers
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/16—Primer sets for multiplex assays
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Analytical Chemistry (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Microbiology (AREA)
- Immunology (AREA)
- Molecular Biology (AREA)
- Biotechnology (AREA)
- Biophysics (AREA)
- Physics & Mathematics (AREA)
- Biochemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US39739302P | 2002-07-19 | 2002-07-19 | |
PCT/US2003/022217 WO2004009765A2 (en) | 2002-07-19 | 2003-07-16 | Strategies for gene expression analysis |
Publications (1)
Publication Number | Publication Date |
---|---|
ATE470722T1 true ATE470722T1 (de) | 2010-06-15 |
Family
ID=30771049
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
AT03765615T ATE470722T1 (de) | 2002-07-19 | 2003-07-16 | Strategien zur genexpressionsanalyse |
Country Status (7)
Country | Link |
---|---|
US (2) | US7476519B2 (de) |
EP (1) | EP1552010B1 (de) |
AT (1) | ATE470722T1 (de) |
AU (1) | AU2003261168A1 (de) |
CA (1) | CA2491023A1 (de) |
DE (1) | DE60332948D1 (de) |
WO (1) | WO2004009765A2 (de) |
Families Citing this family (53)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP1257664A4 (de) * | 2000-01-28 | 2006-04-05 | Althea Technologies Inc | Verfahren zur analyse der genexpression |
CA2536565A1 (en) * | 2003-09-10 | 2005-05-12 | Althea Technologies, Inc. | Expression profiling using microarrays |
EP1721001A4 (de) * | 2004-02-04 | 2007-08-29 | Park Hee Kyung | Qualitätskontrollsonden umfassender mikroarray und verfahren zur herstellung davon |
US20050186606A1 (en) * | 2004-02-11 | 2005-08-25 | Schroeder Benjamin G. | Methods and compositions for detecting nucleic acids |
EP1591534A1 (de) * | 2004-04-01 | 2005-11-02 | Stichting Sanquin Bloedvoorziening | Verfahren zur Genotypisierung von Antigenen von Blutzellen und ein Kit zur Genotypisierung |
NZ554895A (en) * | 2004-11-03 | 2009-06-26 | Almac Diagnostics Ltd | Transcriptome microarray technology and methods of using the same |
EP1883710A4 (de) * | 2005-05-03 | 2009-07-08 | Althea Technologies Inc | Zusammensetzungen und verfahren zur analyse abgebauter nukleinsäuren |
US20100015604A1 (en) * | 2005-08-17 | 2010-01-21 | Evriklia Lianidou | Composition and method for determination of ck19 expression |
JP2009506788A (ja) * | 2005-09-06 | 2009-02-19 | ジェン−プローブ・インコーポレーテッド | 核酸の等温増幅のための方法、組成物及びキット |
US20070092869A1 (en) * | 2005-10-24 | 2007-04-26 | Fulmer-Smentek Stephanie B | Spike-in controls and methods for using the same |
EP2636755A1 (de) * | 2006-05-26 | 2013-09-11 | AltheaDx Incorporated | Biochemische Analyse partitionierter Zellen |
JP5340167B2 (ja) | 2006-12-21 | 2013-11-13 | ジェン−プロウブ インコーポレイテッド | 核酸増幅のための方法および組成物 |
GB2453173A (en) | 2007-09-28 | 2009-04-01 | Dxs Ltd | Polynucleotide primers |
US9551026B2 (en) | 2007-12-03 | 2017-01-24 | Complete Genomincs, Inc. | Method for nucleic acid detection using voltage enhancement |
WO2009086353A1 (en) * | 2007-12-26 | 2009-07-09 | Helicos Biosciences Corporation | Improved two-primer sequencing for high-throughput expression analysis |
DK2281065T3 (en) * | 2008-04-16 | 2015-10-05 | Hudsonalpha Inst For Biotechnology | PROCEDURE TO EVALUATE AND COMPARE IMMUNE REPERTOIRS |
KR20110053416A (ko) * | 2008-07-15 | 2011-05-23 | 재단법인 한국파스퇴르연구소 | 기판상의 피처들을 이미지화하는 방법 및 장치 |
US9506119B2 (en) | 2008-11-07 | 2016-11-29 | Adaptive Biotechnologies Corp. | Method of sequence determination using sequence tags |
US9528160B2 (en) | 2008-11-07 | 2016-12-27 | Adaptive Biotechnolgies Corp. | Rare clonotypes and uses thereof |
EP2364368B1 (de) | 2008-11-07 | 2014-01-15 | Sequenta, Inc. | Verfahren zur überwachung von krankheitszuständen mittels sequenzanalyse |
US8628927B2 (en) | 2008-11-07 | 2014-01-14 | Sequenta, Inc. | Monitoring health and disease status using clonotype profiles |
US9365901B2 (en) | 2008-11-07 | 2016-06-14 | Adaptive Biotechnologies Corp. | Monitoring immunoglobulin heavy chain evolution in B-cell acute lymphoblastic leukemia |
US8748103B2 (en) | 2008-11-07 | 2014-06-10 | Sequenta, Inc. | Monitoring health and disease status using clonotype profiles |
ES2726702T3 (es) | 2009-01-15 | 2019-10-08 | Adaptive Biotechnologies Corp | Perfilado de la inmunidad adaptativa y métodos para la generación de anticuerpos monoclonales |
WO2010135669A1 (en) * | 2009-05-22 | 2010-11-25 | Sabiosciences Corporation | Arrays and methods for reverse genetic functional analysis |
RU2539032C2 (ru) | 2009-06-25 | 2015-01-10 | Фред Хатчинсон Кансэр Рисёч Сентер | Способ измерения искусственного иммунитета |
CA2766391C (en) | 2009-07-01 | 2021-04-20 | Gen-Probe Incorporated | Methods and compositions for multiplex nucleic acid amplification |
JP2011086142A (ja) * | 2009-10-16 | 2011-04-28 | Ricoh Co Ltd | 画像形成装置及びプログラム操作方法 |
US9043160B1 (en) | 2009-11-09 | 2015-05-26 | Sequenta, Inc. | Method of determining clonotypes and clonotype profiles |
US10385475B2 (en) | 2011-09-12 | 2019-08-20 | Adaptive Biotechnologies Corp. | Random array sequencing of low-complexity libraries |
AU2012325791B2 (en) | 2011-10-21 | 2018-04-05 | Adaptive Biotechnologies Corporation | Quantification of adaptive immune cell genomes in a complex mixture of cells |
US10837879B2 (en) | 2011-11-02 | 2020-11-17 | Complete Genomics, Inc. | Treatment for stabilizing nucleic acid arrays |
CA2858070C (en) | 2011-12-09 | 2018-07-10 | Adaptive Biotechnologies Corporation | Diagnosis of lymphoid malignancies and minimal residual disease detection |
US9499865B2 (en) | 2011-12-13 | 2016-11-22 | Adaptive Biotechnologies Corp. | Detection and measurement of tissue-infiltrating lymphocytes |
JP6408380B2 (ja) | 2011-12-19 | 2018-10-17 | ヴァリー ヘルス システム | 癌を患うリスクのある被検体を診断するための方法およびキット |
ES2662128T3 (es) | 2012-03-05 | 2018-04-05 | Adaptive Biotechnologies Corporation | Determinación de cadenas de receptor inmunitario emparejadas a partir de la frecuencia de subunidades coincidentes |
HUE029357T2 (en) | 2012-05-08 | 2017-02-28 | Adaptive Biotechnologies Corp | Preparations and devices for measuring and calibrating amplification distortion in multiplex PCR reactions |
CN104780976B (zh) | 2012-08-13 | 2019-01-01 | 洛克菲勒大学 | 治疗和诊断黑素瘤 |
US20160002731A1 (en) | 2012-10-01 | 2016-01-07 | Adaptive Biotechnologies Corporation | Immunocompetence assessment by adaptive immune receptor diversity and clonality characterization |
AU2013337768B2 (en) | 2012-10-31 | 2015-07-02 | The Rockefeller University | Treatment and diagnosis of colon cancer |
US9708657B2 (en) | 2013-07-01 | 2017-07-18 | Adaptive Biotechnologies Corp. | Method for generating clonotype profiles using sequence tags |
ES2741740T3 (es) | 2014-03-05 | 2020-02-12 | Adaptive Biotechnologies Corp | Métodos que usan moléculas sintéticas que contienen segmentos de nucleótidos aleatorios |
US10066265B2 (en) | 2014-04-01 | 2018-09-04 | Adaptive Biotechnologies Corp. | Determining antigen-specific t-cells |
EP3132059B1 (de) | 2014-04-17 | 2020-01-08 | Adaptive Biotechnologies Corporation | Quantifizierung von adaptiven immunzellgenomen in einer komplexen mischung von zellen |
US10392663B2 (en) | 2014-10-29 | 2019-08-27 | Adaptive Biotechnologies Corp. | Highly-multiplexed simultaneous detection of nucleic acids encoding paired adaptive immune receptor heterodimers from a large number of samples |
US10246701B2 (en) | 2014-11-14 | 2019-04-02 | Adaptive Biotechnologies Corp. | Multiplexed digital quantitation of rearranged lymphoid receptors in a complex mixture |
AU2015353581A1 (en) | 2014-11-25 | 2017-06-15 | Adaptive Biotechnologies Corporation | Characterization of adaptive immune response to vaccination or infection using immune repertoire sequencing |
WO2016138122A1 (en) | 2015-02-24 | 2016-09-01 | Adaptive Biotechnologies Corp. | Methods for diagnosing infectious disease and determining hla status using immune repertoire sequencing |
WO2016161273A1 (en) | 2015-04-01 | 2016-10-06 | Adaptive Biotechnologies Corp. | Method of identifying human compatible t cell receptors specific for an antigenic target |
US10428325B1 (en) | 2016-09-21 | 2019-10-01 | Adaptive Biotechnologies Corporation | Identification of antigen-specific B cell receptors |
AU2018373028A1 (en) | 2017-11-21 | 2020-04-30 | Inspirna, Inc. | Polymorphs and uses thereof |
US11254980B1 (en) | 2017-11-29 | 2022-02-22 | Adaptive Biotechnologies Corporation | Methods of profiling targeted polynucleotides while mitigating sequencing depth requirements |
CN114728875A (zh) | 2019-12-13 | 2022-07-08 | 因思博纳公司 | 金属盐及其用途 |
Family Cites Families (21)
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US5143854A (en) * | 1989-06-07 | 1992-09-01 | Affymax Technologies N.V. | Large scale photolithographic solid phase synthesis of polypeptides and receptor binding screening thereof |
US6040138A (en) * | 1995-09-15 | 2000-03-21 | Affymetrix, Inc. | Expression monitoring by hybridization to high density oligonucleotide arrays |
EP0484440A4 (en) * | 1989-07-28 | 1993-01-07 | Us Health | Efficient directional genetic cloning system |
US5545522A (en) | 1989-09-22 | 1996-08-13 | Van Gelder; Russell N. | Process for amplifying a target polynucleotide sequence using a single primer-promoter complex |
US5807522A (en) * | 1994-06-17 | 1998-09-15 | The Board Of Trustees Of The Leland Stanford Junior University | Methods for fabricating microarrays of biological samples |
US5882856A (en) * | 1995-06-07 | 1999-03-16 | Genzyme Corporation | Universal primer sequence for multiplex DNA amplification |
US5962271A (en) * | 1996-01-03 | 1999-10-05 | Cloutech Laboratories, Inc. | Methods and compositions for generating full-length cDNA having arbitrary nucleotide sequence at the 3'-end |
JP2002515738A (ja) | 1996-01-23 | 2002-05-28 | アフィメトリックス,インコーポレイティド | 核酸分析法 |
US6072043A (en) * | 1996-06-04 | 2000-06-06 | Polyprobe, Inc. | Optimally fluorescent oligonucleotides |
US5922617A (en) * | 1997-11-12 | 1999-07-13 | Functional Genetics, Inc. | Rapid screening assay methods and devices |
AU1166199A (en) | 1997-11-20 | 1999-06-15 | Smithkline Beecham Corporation | Methods for identifying the toxic/pathologic effect of environmental stimuli on gene transcription |
US6087102A (en) * | 1998-01-07 | 2000-07-11 | Clontech Laboratories, Inc. | Polymeric arrays and methods for their use in binding assays |
US6500938B1 (en) * | 1998-01-30 | 2002-12-31 | Incyte Genomics, Inc. | Composition for the detection of signaling pathway gene expression |
US6458566B2 (en) * | 1998-10-23 | 2002-10-01 | Albert Einstein College Of Medicine Of Yeshiva University | Method of identification of differentially expressed MRNA |
US6429027B1 (en) * | 1998-12-28 | 2002-08-06 | Illumina, Inc. | Composite arrays utilizing microspheres |
DK1218542T3 (da) * | 1999-09-13 | 2004-08-02 | Nugen Technologies Inc | Fremgangsmåder og sammensætninger til lineær isotermisk amplifikation af polynukleotidsekvenser |
US6406840B1 (en) * | 1999-12-17 | 2002-06-18 | Biomosaic Systems, Inc. | Cell arrays and the uses thereof |
US6635423B2 (en) * | 2000-01-14 | 2003-10-21 | Integriderm, Inc. | Informative nucleic acid arrays and methods for making same |
EP1257664A4 (de) * | 2000-01-28 | 2006-04-05 | Althea Technologies Inc | Verfahren zur analyse der genexpression |
US20020064788A1 (en) | 2000-07-21 | 2002-05-30 | Monforte Joseph A. | Systematic approach to mechanism-of-response analyses |
US7198895B2 (en) * | 2000-11-14 | 2007-04-03 | Mohanlal Ramon W | In vitro cell-based methods for biological validation and pharmacological screening of chemical entities and biologicals |
-
2003
- 2003-07-16 EP EP03765615A patent/EP1552010B1/de not_active Expired - Lifetime
- 2003-07-16 AU AU2003261168A patent/AU2003261168A1/en not_active Abandoned
- 2003-07-16 AT AT03765615T patent/ATE470722T1/de not_active IP Right Cessation
- 2003-07-16 DE DE60332948T patent/DE60332948D1/de not_active Expired - Lifetime
- 2003-07-16 CA CA002491023A patent/CA2491023A1/en not_active Abandoned
- 2003-07-16 WO PCT/US2003/022217 patent/WO2004009765A2/en not_active Application Discontinuation
- 2003-07-16 US US10/622,010 patent/US7476519B2/en not_active Expired - Fee Related
-
2008
- 2008-11-26 US US12/315,115 patent/US7897750B2/en not_active Expired - Fee Related
Also Published As
Publication number | Publication date |
---|---|
US20090149346A1 (en) | 2009-06-11 |
DE60332948D1 (de) | 2010-07-22 |
EP1552010A4 (de) | 2007-03-14 |
WO2004009765A3 (en) | 2004-12-02 |
EP1552010B1 (de) | 2010-06-09 |
US7897750B2 (en) | 2011-03-01 |
EP1552010A2 (de) | 2005-07-13 |
WO2004009765A2 (en) | 2004-01-29 |
AU2003261168A1 (en) | 2004-02-09 |
US7476519B2 (en) | 2009-01-13 |
CA2491023A1 (en) | 2004-01-29 |
AU2003261168A8 (en) | 2004-02-09 |
US20040132050A1 (en) | 2004-07-08 |
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