WO2022181049A1 - 細胞処理システム、細胞処理方法、学習データ作成方法 - Google Patents
細胞処理システム、細胞処理方法、学習データ作成方法 Download PDFInfo
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- C12M41/00—Means for regulation, monitoring, measurement or control, e.g. flow regulation
- C12M41/30—Means for regulation, monitoring, measurement or control, e.g. flow regulation of concentration
- C12M41/36—Means for regulation, monitoring, measurement or control, e.g. flow regulation of concentration of biomass, e.g. colony counters or by turbidity measurements
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12M—APPARATUS FOR ENZYMOLOGY OR MICROBIOLOGY; APPARATUS FOR CULTURING MICROORGANISMS FOR PRODUCING BIOMASS, FOR GROWING CELLS OR FOR OBTAINING FERMENTATION OR METABOLIC PRODUCTS, i.e. BIOREACTORS OR FERMENTERS
- C12M41/00—Means for regulation, monitoring, measurement or control, e.g. flow regulation
- C12M41/46—Means for regulation, monitoring, measurement or control, e.g. flow regulation of cellular or enzymatic activity or functionality, e.g. cell viability
Definitions
- the present invention relates to a cell processing system, a cell processing method, and a learning data creation method.
- Patent Literature 1 discloses a sample holder that can perform cell sorting, culturing, cell processing, etc. in one space, and that can change the volume of the space to a size suitable for each process. It is
- Patent Document 2 discloses a method for analyzing and sorting cells using a film of a cell-adhesive light control material in which a cell-adhesive material is bonded to a cell-non-adhesive material via a photodissociative group. It is according to Patent Document 2 below, the substrate can be irreversibly changed from cell adhesion to non-adhesion by a photodissociation reaction, so that adhesion selectivity between cells and the substrate is excellent, and cell purity is improved. , the recovery rate can be increased.
- Patent Document 3 describes a photographing unit that photographs images of cells being cultured at predetermined time intervals, a recording control unit that stores event information related to culture such as medium exchange, passage, cleaning of the apparatus, and the photographing unit.
- a culture support device is disclosed that has a learning unit that learns the relationship between an image and the event information.
- the culture vessel observation method described above requires time-lapse observation after cell culture, which can be costly when processing complex cell manufacturing. Therefore, there is a demand for an observation technique for improving cell culture efficiency and obtaining desired cells at low cost.
- this technology is a cell culture unit capable of culturing a group of cells; a measurement unit capable of measuring the cell group; an estimator, and The estimating unit is based on at least one of information on the cells of the cell group before treatment, information on predetermined cells to be reached after the treatment of the cell group, and predetermined processing conditions for the cell group before treatment.
- a cell processing system for estimating processing conditions under which the cell group can be derived from the information regarding the predetermined cells, or information regarding the cells after the processing of the cell group derived under the predetermined processing conditions. .
- the estimation unit may set the information about the predetermined cells and/or the predetermined processing conditions based on information regarding approval of the commercialized cells.
- the measurement unit may be configured to acquire at least one of information about the cells before the treatment, information about the cells after the treatment, and information about the cells in the cell group being treated.
- the measurement unit may include at least one of an image acquisition unit and a signal detection unit.
- the image acquired by the image acquiring section may be a stained image and/or an unstained image.
- the stain image may include a fluorescence image.
- the unstained image may include at least one of a bright-field image, a phase-contrast image, a polarized image, and an image that is pseudo-stained for each cell feature identified from information learned from the unstained image and the fluorescence image. .
- the image acquisition unit may acquire an image from at least one of a CMOS, a signal processing sensor, and an event detection sensor.
- the apparatus may further include a control unit that controls the cells to be sorted based on the predetermined processing conditions or the processing conditions estimated by the estimation unit.
- the apparatus may further include a control unit that controls the cells to be cultured based on the predetermined processing conditions or the processing conditions estimated by the estimation unit.
- the apparatus may further include a control unit that controls the cells to be sorted and cultured based on the predetermined processing conditions or the processing conditions estimated by the estimation unit.
- the control unit sets a threshold for the estimated processing conditions or information about the treated cells, and discontinues production of the cells according to the threshold or according to information specified by a user, and/or Can be processed for re-collection.
- the control unit can treat the cells immobilized in the culture vessel via the photoselective linker so as to sort the cells by optical control.
- the culture control may control at least one of a physicochemical environment and a physiological environment. Controlling the physico-chemical environment may include controlling by at least one of humidity, pH, osmotic pressure, oxygen partial pressure, carbon dioxide partial pressure. Control of the physiological environment may include control by at least one of media, stimulating factors, transcription factors, and cell density.
- the cell processing system uses, as input information, the cells processed under the processing conditions estimated by the estimation unit and information related to a therapy using the cells, and learns the relationship between the cells and the information related to the therapy. and a first learner.
- the estimating unit may estimate information about treatment of the cells after treatment of the cell group derived from the treatment conditions based on the first learner and the information about the cells before treatment.
- the cell processing system uses, as input information, the information about the cells before processing, the processing conditions estimated by the estimation unit, and the cells before processing that have been processed under the processing conditions.
- a second learner that learns associations between the information and the processing conditions may further be included.
- the estimation unit may estimate a processing condition capable of deriving the cell group based on the information on the predetermined cell based on the second learner and the information on the cell before processing.
- the information on the cells before treatment may include at least one of information on composition, state, number, ratio, type, growth rate, viability, genetic information, and molecules of the cells before treatment.
- the information about the molecule can include at least one of gene expression control factors such as transcription factors and transcription control factors, information on molecular markers, and information on cell surface antigens.
- the information about the treated cells may include at least one of composition, condition, number, ratio, increase rate, survival rate, response rate, recurrence rate, and side effects of the treated cells.
- Said treatment conditions may include culture conditions relating to at least one of a stimulant, number of days in culture.
- Said population of cells may consist of a peripheral blood mononuclear cell fraction taken from a patient or a donor.
- the present technology provides information about cells before treatment of a cell population, Based on at least one of information about predetermined cells to be reached after treatment of the cell group and predetermined treatment conditions for the cell group before treatment, an estimating unit for estimating processing conditions capable of deriving the cell group from the information regarding the predetermined cells, or information regarding the processed cells of the cell group derived under the predetermined processing conditions; Equipment is also provided.
- the present technology uses, as input information, cells processed under processing conditions estimated by an information processing device and information related to a therapy using the cells, and learns the relationship between the cells and the information related to the therapy.
- a data preparation method is also provided.
- the present technology uses, as input information, information about cells before processing, processing conditions estimated by an information processing device, and cells before processing that have been processed under the processing conditions, and information about cells before processing.
- a learning data creation method for learning the relevance of the processing conditions is also provided.
- the present technology provides information on cells before treatment of a group of cells contained in a sample, Based on at least one of preset information about predetermined cells to be reached after treatment of the cell group and predetermined treatment conditions for the cell group before treatment, A cell processing method comprising an estimating step of estimating processing conditions capable of deriving the cell group into the predetermined cell information, or estimating information regarding the treated cells of the cell group derived under the predetermined processing conditions. offer.
- FIG. 1 is a schematic diagram of an example of a cell processing system according to the present technology; FIG. Examples of block diagrams of a cell culture unit, an information processing unit, and a measurement unit are shown.
- 1 is a schematic diagram of a cell processing container according to the present technology;
- FIG. 1 is a schematic diagram of an immobilized first molecule according to the present technology;
- FIG. It is a mimetic diagram showing an example of composition of a cell processing container concerning this art.
- It is a schematic diagram showing an example of a configuration of an optical control unit according to the present technology. It is a figure which shows roughly the whole structure of a microscope system.
- 1 is a diagram schematically showing the overall configuration of a biological sample analyzer;
- FIG. 1 is a flow diagram of a sample preparation process according to the present technology
- FIG. FIG. 4 is a flow diagram of a process of obtaining information on cells before treatment according to the present technology
- 4 is a flow diagram of an estimation process according to the present technology
- FIG. 2 is a flow diagram of processing steps according to the present technology
- FIG. It is a mimetic diagram for explaining an example of composition of a cell processing system of this art. It is a mimetic diagram for explaining an example of composition of a cell processing system of this art. It is a mimetic diagram for explaining an example of composition of a cell processing system of this art. It is a mimetic diagram for explaining an example of composition of a cell processing system of this art.
- FIG. 4 shows the amount of additive added to the medium in each well.
- FIG. 4 shows fluorochrome-labeled antibodies used in flow cytometer measurements. It is a figure for demonstrating the outline
- FIG. 4 is a graph showing an example of changes in measured cell composition;
- FIG. A part of the data set used for creating the trained model is shown.
- a part of the data set used for creating the trained model is shown.
- FIG. 4 is a diagram for explaining the prediction accuracy of a generated learned model; It is a figure which shows the example of the contribution data regarding an explanatory variable.
- FIG. 4 is a diagram for explaining the prediction accuracy of a generated learned model; It is a figure which shows the example of the contribution data regarding an explanatory variable.
- First embodiment (cell processing system) (1) Details of the problem to be solved by the invention (2) Description of the first embodiment (3) Example of the first embodiment (3-1) Cell culture section (3-2) Information processing section (3-3) Measurement Part 2.
- Second embodiment (cell processing method) (1-1) Sample preparation step (1-2) Information acquisition step on cells before treatment (1-3) Estimation step (1-4) Treatment step (1-5) Information acquisition step on cells after treatment (1 -6) Learning process 3. Configuration example of cell processing system 4.
- Patent Literature 1 discloses a sample holder that can perform cell sorting, culturing, cell processing, and the like in one space, and that can change the volume of the space to a size suitable for each process. It is
- Patent Document 2 discloses a method for analyzing and sorting cells using a film of a cell-adhesive light control material in which a cell-adhesive material is bonded to a cell-non-adhesive material via a photodissociative group. It is
- Patent Documents 1 and 2 a method is proposed in which a cell adhesive/non-adhesive substrate is optically controlled to enable cell sorting, culturing, recovery, and cell processing. No method has been proposed for
- the initial cell composition of a group of cells before culture treatment is not uniform and varies depending on the patient, the date of collection, the history of treatment, etc. Therefore, even if culture treatment is performed under the same conditions, the final cell composition
- the composition, state, number, etc. of the cell groups will differ.
- peripheral blood mononuclear cells (PBMCs) obtained from a patient or donor can be grown in culture and/or transduced to produce cells that attack specific cancer cells. obtain.
- PBMCs peripheral blood mononuclear cells
- the cellular composition and/or state of PBMCs collected from patients or donors are heterogeneous because they vary from patient to patient or donor, and even from the same patient or donor depending on the patient's or donor's condition at the time of collection. be.
- Patent Document 3 discloses a recording unit that captures an image of cells being cultured at predetermined time intervals, and a record that stores information on events related to culture (medium replacement, passage, cleaning inside the device).
- a culture observation device is disclosed that has a control unit and a learning unit that learns the relationship between the captured image and the event information.
- Patent Document 3 only discloses a method for observing a single cell type under a culture environment, and does not disclose a method for observing the cell composition, state, and number of a group of cells as described above.
- processing including culture control and cell sorting is performed according to the cell composition, state, and number of the cell group before treatment, and the cell composition/state/number of the cell group after treatment is homogenized. It is intended to
- the cell processing system of the present technology includes information on cells before treatment of a cell group contained in a sample, information on predetermined cells to be reached after treatment of the cell group set in advance, and predetermined information on the cell group before treatment. and at least one of the processing conditions, a processing condition capable of deriving the cell group into the predetermined cell-related information, or information related to the treated cells of the cell group derived under the predetermined processing condition. includes an estimator for estimating With this system, information on the desired cell group and information on the desired cell group are obtained from information on the cells before treatment in the cell group, information on the predetermined cells set by the user, etc., and information on the treatment conditions. It is possible to estimate the treatment conditions for the treatment, and to efficiently and inexpensively determine the final cell composition/state/number of the cell group after treatment without performing a specific culture process or other treatment. can be homogenized.
- the estimation unit may estimate a processing condition capable of deriving the cell group to information on the predetermined cell.
- the estimation may be performed, in particular, based on information on pre-treatment cells of the cell group contained in the sample and predetermined information on predetermined cells to be reached after treatment of the cell group.
- the estimating unit may estimate information about the treated cells of the cell group derived under the predetermined treatment conditions. The estimation may be performed, in particular, based on information about pre-treatment cells of the cell group contained in the sample and predetermined treatment conditions for the pre-treatment cell group.
- the cell processing system may include a control unit that controls the cells to be sorted and/or cultured based on predetermined processing conditions or processing conditions estimated by the estimating unit. .
- the cell group can be processed, and by processing the cells under the processing conditions estimated by the estimation unit or the processing conditions specified by the user or the like, the final cell configuration of the cell group after processing can be obtained. / state / number can be evened out.
- the cell treatment method may further include a measurement step of acquiring information on the cells being treated over time.
- a measurement step of acquiring information on the cells being treated over time it is possible to acquire information about the cell group over time in each treatment process, and to observe the treatment status of the cell group over time, increasing the efficiency of the treatment process.
- the cell processing system 1000 includes a cell culture section 1, an information processing section 2, and a measurement section 3.
- the information processing section 2 may include an estimation section 300 .
- the estimation unit 300 executes the estimation process described in (2) above.
- a configuration example of the cell processing system 1000 is shown in FIG.
- the cell culture unit 1 may include, for example, a sample holding unit 100 and a control unit 200, as shown in the figure.
- the information processing section 2 may include, for example, an estimating section 300 and a learning section 400, as shown in FIG.
- the information processing section 2 may further include a database 500 .
- the measurement unit 3 may include, for example, an image acquisition unit 600 as shown in the figure. These are described below.
- FIG. 1 A schematic diagram of the sample holding unit 100 of the cell culture unit 1 is shown in FIG.
- a first molecule capable of binding to target cells is immobilized on the sample holding portion 100 via a degradable linker.
- a degradable linker may be secured to the bottom surface of container 101, as shown in FIG.
- the sample holder 100 may be variable such that its volume increases or decreases.
- the sample holding unit 100 captures the target cells with the first molecules 104 immobilized inside.
- the captured target cells are cultured within the culture vessel 101 .
- the target cell may mean a cell to be cultured among the cells contained in the sample.
- a first molecule 104 is immobilized inside the culture container 101 of the sample holding part 100 via, for example, a polymer 102 and a degradable linker 103 .
- the degradable linker 103 may be directly immobilized without going through the polymer 102 .
- Immobilization is not limited to the bottom surface of the culture container 101 and may be the inner wall, or if a planar or three-dimensional internal structure exists inside the culture container 101, the surface of the structure may be immobilized to
- the inner surface of the culture vessel 101 is desirably coated with a substance suitable for cell survival (eg, collagen, fibroblast, etc.).
- the polymer 102 is preferably non-stressing or non-toxic to cells, or biocompatible.
- examples of polymers include, for example, polyethylene glycol (PEG), 2-methacryloyloxyethyl phosphorylcholine polymer (MPC polymer).
- a degradable linker 103 may be attached to the end of the polymer opposite to the attachment point to the culture vessel 101 .
- a degradable linker is a molecule that degrades upon a specific external stimulus.
- a degradable linker connects the first molecule 104 through the polymer 102 or to the bottom of the container.
- Degradable linkers include, for example, linkers that are decomposed by light of a specific wavelength, linkers that are decomposed by enzymes, linkers that are decomposed by temperature, and the like.
- the degradable linker is preferably a photodegradable linker because it can be controlled for each single cell and the degradation time is short.
- a photodegradable linker is a molecule with a structure that is decomposed by light of a specific wavelength.
- the photodegradable linker may contain, for example, any one of the following as a group that provides photodegradability: a methoxynotrobenzyl group, a nitrobenzyl group (JP-A-2010-260831), a parahydroxyphenacyl group (tetrahedron Letters, 1962, Vol. 1, p. 1), 7-nitroindoline group (Journal of American Chemical Society, 1976, Vol. 98, p.
- the wavelength at which the photodegradable linker is degraded almost matches the absorption wavelength of the molecule.
- the photocleavable linker contains a methoxynotrobenzyl group
- the absorption at 346 nm is 1
- the absorption at 364 nm is 0.89
- the absorption at 406 nm is 0.15
- the absorption at 487 nm is 0.007. That is, when a light source of 365 nm is used, the decomposition efficiency of the photodegradable linker is high, and the photodegradable linker has the property of being hardly decomposed by a light source of 488 nm.
- the wavelength of the light irradiated to the photodegradable linker should be a wavelength corresponding to each photodegradable linker.
- the wavelength is around 330 to 450 nm.
- cytotoxicity due to UV although it depends on the type of cell, it is said that 500 J/cm ⁇ 2 damages DNA and inhibits cell growth (Callegari, A. J. & Kelly, T. J. Shedding light on the DNA damage checkpoint.
- the first molecule 104 has a site that can bind to cells.
- a cell-binding site for example, an oleyl group, a cholesteryl group, an antibody, an aptamer, a molecular recognition polymer, or the like can be used.
- the oleyl group and cholesteryl group are hydrophobic and adhere to the surface of floating cells.
- a spacer such as PEG may be added to the oleyl group, and an NHS group (N-hydroxysuccinimide group) may be included at the end of the spacer to form the first molecule.
- the antibody binds to a cell surface molecule antigen present on target cells.
- the antibodies include antibodies against cancer-specific antigens, antibodies against major histocompatibility antigens, antibodies against sugar chains, and the like.
- the aptamers are nucleic acid molecules or peptides that specifically bind to molecules possessed by target cells.
- Examples of the aptamers include DNA aptamers, RNA aptamers, peptide aptamers, and modified aptamers in which specificity is improved by introducing modifications to the nucleic acid backbone or bases.
- the molecular recognition polymer captures target cell surface molecules with high selectivity even in the presence of compounds with physicochemical properties similar to those of target cells.
- the molecular recognition polymer is also called a molecular imprint polymer and has a selectively synthesized compound recognition region.
- FIG. 4 shows a schematic example of the state in which the first molecule 104 is immobilized in the culture vessel 101.
- a first molecule 104 is immobilized on the bottom surface of culture vessel 101 via polymer 102 and degradable linker 103 .
- the first molecule 104 is directly attached to the degradable linker 103 in FIG. 4, it may be attached to the degradable linker 103 via a polymer.
- the first molecule 104 is preferably immobilized so that one target cell binds to one spot.
- cells having molecules (antibodies, sugar chains, etc.) that can bind to the first molecule 104 can be selected at the single cell level. Also, such sorting can be performed for all spots.
- the first molecules 104 are preferably immobilized in an array in the culture container 101 .
- a method of spotting the first molecules 104 in an array a microcontact printing method, a spotting method, or a method of decomposing unnecessary portions after arranging them on the entire surface using the characteristics of the photodegradable linker is used. good.
- the PEG or the MPC polymer may be coated or bonded to the part of the culture vessel 101, thereby suppressing non-specific adsorption of cells. After irradiating the photodegradable polymer with light to release unnecessary cells, it is preferable to leave the PEG or MPC polymer to prevent non-specific adsorption of cells to the released spots.
- the first molecule to be spotted may be of one type, and for example, a first molecule configured to specifically capture only one type of cell may be adopted.
- a first molecule with different specificity may be immobilized on each spot, and different cells may be captured on each spot.
- the inside of the culture vessel 101 may be divided into compartments, and the first molecules having different specificities may be immobilized in each compartment, thereby enabling different cells to be captured in each compartment in the same vessel.
- the first molecule that captures all types of cells may be immobilized, and in this case, cells may be sorted using the labeled second molecule described below. The use of multiple labeled second molecules allows for multicolor analysis.
- the culture container 101 may be configured such that its volume is variable.
- the culture vessel 101 preferably has a variable part made of a flexible material, and preferably can extend and contract vertically and/or horizontally.
- the volume can be changed by adjusting the amount of liquid or the amount of air introduced from the connecting part 105 provided in the culture vessel 101 .
- Controlling the flow rate of the liquid or air supplied into the culture vessel 101 so as to change the volume of the liquid (e.g., medium, buffer solution, staining buffer, etc.) in the culture vessel 101 without changing the volume may be implemented.
- the reaction or the like can be performed at the optimal concentration for the cells in the container.
- the volume of the culture vessel 101 or medium volume in order to efficiently trap the target cells in the first molecules 104. This is because when the volume or medium volume is small, the probability of contact between the target cells and the first molecule 104 increases.
- the culture vessel 101 preferably has gas permeability.
- gas permeability As a result, when the cell culture requires the supply of oxygen and/or the discharge of carbon dioxide, for example, the inside of the vessel can be made into an environment (optimal CO2 concentration, optimum temperature, etc.) suitable for cell culturing.
- the surface on which cells grow is preferably formed of, for example, a porous membrane or an oxygen-permeable membrane.
- the culture container 101 may be connected by a connecting part 105 to a sample containing the target cells or a container containing the culture solution.
- a cell input unit 106, a second molecule supply unit 107, an activator supply unit 108, a gene supply unit 109, a culture fluid supply unit 110, a washing fluid supply unit 111, a waste fluid storage unit 112, and Any one or more of the cell collection units 113 may be connected to the culture vessel 101 . All of these may be placed under conditions suitable for cell culture, or only the culture vessel 101 may be placed under conditions suitable for cell culture.
- the cell input unit 106 holds a sample (especially a liquid sample) containing target cells, and inputs the sample into the culture vessel 101 .
- the type of target cells is not particularly limited, and may be any of human-derived cells, immune cells, animal-derived cells, plant-derived cells, microorganism-derived cells, cancer cells, normal cells, stem cells, and epithelial cells.
- target cells include cells in blood and cells collected from living tissue.
- target cells may be either adherent cells or non-adherent cells.
- the sample may contain one or more types of target cells.
- the second molecule supply unit 107 holds the second molecule therein and is configured to introduce the second molecule into the culture vessel 101 . If multiple types of second molecules are required, the number of second molecule supply units 107 may be increased according to the number.
- a second molecule may be a molecule capable of binding to a cell of interest.
- the second molecule may be labeled with a fluorescent substance or the like.
- a structure (for example, a sandwich structure) in which the target cell is sandwiched between the first molecule and the second molecule is formed, and the formation of the structure can be recognized by the label.
- the second molecule like the first molecule, may be selected, for example, from the group consisting of oleyl groups, antibodies, aptamers, and molecular recognition polymers.
- the second molecule may be a molecule that specifically binds only to desired cells among the cells captured by the first molecule.
- the label of the second molecule may be one type of fluorescent substance or multiple types of fluorescent substances.
- one type of target cell may be recognized using one type of fluorescent material.
- multiple types of target cells may be recognized using multiple types of fluorescent substances, and techniques such as so-called multicolor analysis may be used.
- Cells that could not be recognized by the second molecule apply a stimulus to the degradable linker of the spot where the cell is captured, and the linker is cleaved by the stimulus, releasing the cell. Free cells can be washed away from the culture vessel 101 with a washing liquid as waste.
- Cells may be identified and released by photostimulation. The identification may be performed by the information processing section 2 .
- the information processing section 2 can drive the optical control section based on the identification result to provide the optical stimulus.
- the second molecule becomes unnecessary, which can contribute to cost reduction of the process.
- the dyeing process can be omitted, it contributes to the shortening of the process.
- the cleaning liquid supply unit 111 holds the cleaning liquid.
- a cleaning liquid is supplied when cleaning the culture container 101 of unnecessary substances and the like.
- the wash solution may be one generally used for cell culture and the like. Examples of washing solutions include, but are not limited to, physiological saline, Tris buffer, HEPES buffer, and purified water.
- the activator supply unit 108 holds an activator that activates cells, particularly a liquid containing the activator.
- the activator supply unit 108 may be configured to supply an activator into the culture vessel 101 .
- the activating agent may be selected according to the target cell, and includes, but is not limited to, cytokines, hormones, interleukins, antibodies, and the like. The activating agent can activate the cells before, during or after culturing the cells of interest.
- the gene supply unit 109 holds genes to be introduced into target cells.
- the gene supply unit 109 may be configured to supply the gene into the culture vessel 101 .
- the gene may be either an endogenous gene or an exogenous gene.
- the gene may be incorporated into a phage vector, plasmid vector, virus vector, or the like suitable for gene transfer.
- the gene supply unit 109 can supply the culture vessel 101 with a virus vector incorporating a target gene.
- the viral vector can be used to infect target cells for gene transfer.
- the gene supply unit 109 may supply a genome editing reagent containing a specific base sequence and a specific enzyme, such as the CRISPR/Cas9 system, to the culture vessel 101, thereby introducing genes into target cells. good too.
- the culture solution supply unit 110 holds a culture solution suitable for target cells and supplies the culture solution to the culture container 101 .
- a culture medium suitable for target cells can be selected, and for example, Eagle's medium, D-MEM medium, E-MEM medium, RPMI-1640 medium, Dulbecco's PBS medium, etc. can be used. If the culture solution is colored with phenol red or the like, the optimal pH range of the culture solution (for example, pH 6.8 to 7.2) can be controlled while the target cells are being cultured in the culture container 101 .
- the waste liquid reservoir 112 once receives the waste liquid containing the unnecessary matter, the culture medium, or the like.
- the waste liquid is subjected to sterilization or the like as necessary, and then discarded.
- the cell collection unit 113 collects and retains the cells cultured in the culture vessel 101.
- the collection method is not particularly limited, but it is possible by suction, extrusion, disposing the cell collection part 113 below the culture vessel 101, or the like.
- the physicochemical environment supply unit 114 holds or provides the physical environment of the sample holding unit 100 .
- the physical environment during culture can be appropriately selected according to the target cells, and is not particularly limited, but examples include humidity, pH, osmotic pressure, oxygen partial pressure, carbon dioxide partial pressure, and the like. This provides an optimal physical environment for the target cells and can increase cell viability.
- connection part 105 connects the culture vessel 101 and any one or more of the parts 106 to 114, and the liquid flows.
- a tube for example, is used for the connecting portion 105 .
- a peristaltic pump that does not come into contact with the liquid is preferable as a method for sending the liquid.
- the control section 200 of the cell culture section 1 includes, for example, an optical control section and an environment control section.
- the control unit 200 physicochemically controls the cells contained in the sample holding unit 100 and/or the environment around the cells.
- the optical control unit may impart a stimulus by irradiating light of a specific wavelength corresponding to the degradable linker by optical control.
- the optical control unit may include, for example, a light source and a MEMS (Micro Electro Mechanical Systems) element for causing light emitted from the light source to reach a predetermined position (predetermined position in the container 101).
- the MEMS device may be, for example, a DMD or scanning mirror.
- the optical control section may further include optical elements (eg, lenses, filters, mirrors, prisms, etc.) for controlling the shape and/or wavelength of the light.
- the environment control section may maintain or provide a physicochemical or physiological environment around cells contained in the sample holding section 100 by physicochemical or physiological control.
- FIG. 6 shows an example of the configuration of the optical control section.
- the optical controller 210 shown in FIG. 6 includes a light source 211, a focusing lens 212, an excitation filter 213, a digital mirror device 214, and a projection lens 215 in order to irradiate light of the specific wavelength.
- a light source 211 emits light of a wavelength corresponding to the photocleavable linker.
- a focusing lens 212 focuses the light and an excitation filter 213 extracts and transmits only light of a particular wavelength.
- the digital mirror device 214 is composed of movable micromirrors, and by tilting each micromirror, it is possible to selectively irradiate each spot where the first molecule is immobilized.
- the projection lens 215 irradiates the light reflected by the digital mirror device 214 toward the surface of the culture vessel 101 having the spot where the first molecule is immobilized.
- the selective light irradiation by the optical control unit 210 can selectively decompose the degradable linker in the spot where the cell to be liberated is captured.
- the optical control unit 210 can further comprise a stimulation control unit that enables stimulation of the degradable linkers for each of the first spots.
- a stimulation control unit that enables stimulation of the degradable linkers for each of the first spots.
- the optical control unit 210 is a light irradiation device, for example, cells placed in the culture container 101 at intervals of several tens of ⁇ m may be irradiated individually. MEMS shutter etc. can be used.
- the excitation filter 213 is arranged between the light source 211 and the DMD 214, and multicolor analysis is possible by inserting a mechanism such as rotation of the filter so as to obtain an optimum filter configuration according to the purpose.
- the stimulation control section of the light irradiation device using this can control 1920 ⁇ 1080 sites simultaneously (turn ON/OFF the irradiation). Individual control to approximately 2 ⁇ 10 6 cells is therefore possible simultaneously. For example, when cells ( ⁇ 30um or less) are aligned at 1920x1080 at a pitch of 30 ⁇ m, an area of approximately 58x33mm is required. If you want to treat 10 7 cells, prepare 10 sides of this. When five surfaces are arranged in two rows, the size is 116 ⁇ 165 mm, which is one size smaller than the B6 size, and is a size that can be realized for analysis of 2 ⁇ 10 7 cells.
- the environmental controller controls the physico-chemical and/or physiological environment within the container 101 .
- the environment control unit controls the physicochemical environment supply unit 114 so that the humidity, pH, osmotic pressure, oxygen partial pressure, or carbon dioxide in the container 101 Partial pressure etc. can be controlled.
- the environment controller can control at least one of the activator supply unit 108, the gene supply unit 109, and the culture fluid supply unit 110 to control the physiological environment.
- the optimal physiological environment is provided for the target cells under the culture environment, and the cell culture efficiency can be improved.
- Control of the physiological environment may include control by at least one of media, stimulating factors, transcription factors, and cell density.
- the cell processing system 1000 includes an information processing section 2 having an estimating section 300 , a learning section 400 and a database 500 .
- the estimating unit 300 obtains information about cells before treatment of the cell group contained in the sample, information about predetermined cells to be reached after the treatment of the cell group set in advance, and predetermined processing conditions for the cell group before treatment. at least one of the above, and estimating processing conditions under which the cell group can be derived from the predetermined cell information, or information regarding the treated cells of the cell group derived under the predetermined processing conditions. .
- information on the desired cell group and information on the desired cell group are obtained from the information on the cells before treatment in the cell group, the information on the predetermined cells set by the user etc., and the information on the treatment conditions. It is possible to estimate the treatment conditions of , efficiently and at low cost, without performing specific culture processes, etc., to uniformize the final cell composition / state / number of the cell group after treatment. can be made
- the learning unit 400 uses information on cells processed under the processing conditions estimated by the estimation unit 300 and information on treatment using the cells as input information for learning, and determines the relevance of the information on the cells and the treatment.
- a first learning device that learns the information about the unprocessed cells, the processing conditions estimated by the estimation unit 300, and the unprocessed cells processed according to the processing conditions as input information for learning as a second learning device for learning the relationship between the information about the cells before the treatment and the treatment conditions. This makes it possible to estimate the treatment conditions for achieving the desired cell population and the information regarding the cell population after treatment for achieving the desired therapeutic effect on the cells from the information regarding the cells before treatment in the cell population. , can increase the efficiency of the cell culture process.
- the database 500 acquires and holds the cell treatment conditions acquired by the cell culture unit 1, the information on the cells acquired by the measurement unit 3, and the information on the treatment of the cells acquired from the external database.
- the database 500 may be configured to transmit the above information to the estimator 300 and the learner 400 .
- the estimating unit 300 and the learning unit 400 can refer to the information held in the database 500, and the estimation efficiency and the learning efficiency of the estimating unit 300 and the learning unit 400 are improved.
- the information processing section 2 may be configured as a general-purpose computer, and may be configured as an information processing section including, for example, a CPU, a RAM, and a ROM.
- the information processing section may be contained within the housing in which the cell culture section 1 and the measurement section are provided, or may be outside the housing. Also, various processes or functions by the information processing unit may be realized by a server computer or cloud connected via a network.
- the cell processing system 1000 includes a measurement unit 3 that acquires at least one of information about cells before processing, information about cells after processing, and information about cells being processed. This increases the efficiency of the processing steps by the sample processing unit.
- the measurement unit 3 includes an image acquisition unit 600 that acquires information about cells being processed by the control unit 200 by acquiring an image.
- the image acquired by the image acquiring section may be a stained image and/or an unstained image.
- the stain image may include a fluorescence image.
- the unstained image is a bright field image, a phase contrast image, a polarized image, and at least one of pseudo-stained images for each cell feature identified from information learned from the unstained image and the fluorescent image.
- the measurement unit 3 may include a signal detection unit that acquires information about the cells being processed by the sample processing unit by acquiring signals.
- the image acquisition unit 600 can be configured as a microscope system described in (3-3-1) below.
- the measurement unit 3 may be configured as a biological sample analyzer. The biological sample analyzer will be described below in (3-3-2).
- a configuration example of the microscope system is shown in FIG.
- a microscope system 5000 shown in FIG. 7 includes a microscope device 5100 , a control section 5110 and an information processing section 5120 .
- a microscope device 5100 includes a light irradiation section 5101 , an optical section 5102 , and a signal acquisition section 5103 .
- the microscope device 5100 may further include a sample placement section 5104 on which the biological sample S is placed.
- the configuration of the microscope apparatus is not limited to that shown in FIG. 7.
- the light irradiation unit 5101 may exist outside the microscope apparatus 5100. It may be used as the unit 5101 .
- the light irradiation section 5101 may be arranged such that the sample mounting section 5104 is sandwiched between the light irradiation section 5101 and the optical section 5102, and may be arranged on the side where the optical section 5102 exists, for example.
- the microscope apparatus 5100 may be configured for one or more of bright field observation, phase contrast observation, differential interference observation, polarization observation, fluorescence observation, and dark field observation.
- the microscope system 5000 may be configured as a so-called WSI (Whole Slide Imaging) system or digital pathology system, and can be used for pathological diagnosis.
- Microscope system 5000 may also be configured as a fluorescence imaging system, in particular a multiplex fluorescence imaging system.
- the microscope system 5000 may be used to perform intraoperative pathological diagnosis or remote pathological diagnosis.
- the microscope device 5100 acquires data of the biological sample S obtained from the subject of the surgery, and transfers the data to the information processing unit 5120. can send.
- the microscope device 5100 can transmit the acquired data of the biological sample S to the information processing unit 5120 located in a place (another room, building, or the like) away from the microscope device 5100 .
- the information processing section 5120 receives and outputs the data.
- a user of the information processing unit 5120 can make a pathological diagnosis based on the output data.
- the biological sample S may be a sample containing a biological component.
- the biological components may be tissues, cells, liquid components of a living body (blood, urine, etc.), cultures, or living cells (cardiomyocytes, nerve cells, fertilized eggs, etc.).
- the biological sample may be a solid, a specimen fixed with a fixative such as paraffin, or a solid formed by freezing.
- the biological sample can be a section of the solid.
- a specific example of the biological sample is a section of a biopsy sample.
- the biological sample may be one that has undergone processing such as staining or labeling.
- the treatment may be staining for indicating the morphology of biological components or for indicating substances (surface antigens, etc.) possessed by biological components, examples of which include HE (Hematoxylin-Eosin) staining and immunohistochemistry staining. be able to.
- the biological sample may be treated with one or more reagents, and the reagents may be fluorescent dyes, chromogenic reagents, fluorescent proteins, or fluorescently labeled antibodies.
- the specimen may be one prepared for the purpose of pathological diagnosis or clinical examination from a specimen or tissue sample collected from the human body. Moreover, the specimen is not limited to the human body, and may be derived from animals, plants, or other materials.
- the specimen may be the type of tissue used (such as an organ or cell), the type of target disease, the subject's attributes (such as age, sex, blood type, or race), or the subject's lifestyle. The properties differ depending on habits (for example, eating habits, exercise habits, smoking habits, etc.).
- the specimens may be managed with identification information (bar code information, QR code (registered trademark) information, etc.) that allows each specimen to be identified.
- the light irradiation unit 5101 is a light source for illuminating the biological sample S and an optical unit for guiding the light irradiated from the light source to the specimen.
- the light source may irradiate the biological sample with visible light, ultraviolet light, or infrared light, or a combination thereof.
- the light source may be one or more of halogen lamps, laser light sources, LED lamps, mercury lamps, and xenon lamps. A plurality of types and/or wavelengths of light sources may be used in fluorescence observation, and may be appropriately selected by those skilled in the art.
- the light irradiator may have a transmissive, reflective, or episcopic (coaxial or lateral) configuration.
- the optical section 5102 is configured to guide the light from the biological sample S to the signal acquisition section 5103 .
- the optical section can be configured to allow the microscope device 5100 to observe or image the biological sample S.
- Optical section 5102 may include an objective lens.
- the type of objective lens may be appropriately selected by those skilled in the art according to the observation method.
- the optical section may include a relay lens for relaying the image magnified by the objective lens to the signal acquisition section.
- the optical unit may further include optical components other than the objective lens and the relay lens, an eyepiece lens, a phase plate, a condenser lens, and the like.
- the optical section 5102 may further include a wavelength separation section configured to separate light having a predetermined wavelength from the light from the biological sample S.
- the wavelength separation section can be configured to selectively allow light of a predetermined wavelength or wavelength range to reach the signal acquisition section.
- the wavelength separator may include, for example, one or more of a filter that selectively transmits light, a polarizing plate, a prism (Wollaston prism), and a diffraction grating.
- the optical components included in the wavelength separation section may be arranged, for example, on the optical path from the objective lens to the signal acquisition section.
- the wavelength separation unit is provided in the microscope apparatus when fluorescence observation is performed, particularly when an excitation light irradiation unit is included.
- the wavelength separator may be configured to separate fluorescent light from each other or white light and fluorescent light.
- the signal acquisition unit 5103 can be configured to receive light from the biological sample S and convert the light into an electrical signal, particularly a digital electrical signal.
- the signal acquisition unit may be configured to acquire data on the biological sample S based on the electrical signal.
- the signal acquisition unit may be configured to acquire data of an image (image, particularly a still image, a time-lapse image, or a moving image) of the biological sample S, particularly an image magnified by the optical unit. It can be configured to acquire data.
- the signal acquisition unit includes one or more imaging elements, such as CMOS or CCD, having a plurality of pixels arranged one-dimensionally or two-dimensionally.
- the signal acquisition unit may include an image sensor for acquiring a low-resolution image and an image sensor for acquiring a high-resolution image, or an image sensor for sensing such as AF and an image sensor for image output for observation. and may include In addition to the plurality of pixels, the image sensor includes a signal processing unit (including one, two, or three of CPU, DSP, and memory) that performs signal processing using pixel signals from each pixel, Further, the signal processing sensor may include an output control section that controls output of image data generated from pixel signals and processed data generated by the signal processing section. Furthermore, the imaging device may include an asynchronous event detection sensor that detects, as an event, a change in brightness of a pixel that photoelectrically converts incident light exceeding a predetermined threshold. An imaging device including the plurality of pixels, the signal processing section, and the output control section may preferably be configured as a one-chip semiconductor device.
- the control unit 5110 controls imaging by the microscope device 5100 .
- the control unit can drive the movement of the optical unit 5102 and/or the sample placement unit 5104 to adjust the positional relationship between the optical unit and the sample placement unit.
- the control unit 5110 can move the optical unit and/or the sample placement unit in a direction toward or away from each other (for example, the optical axis direction of the objective lens). Further, the control section may move the optical section and/or the sample placement section in any direction on a plane perpendicular to the optical axis direction.
- the control unit may control the light irradiation unit 5101 and/or the signal acquisition unit 5103 for imaging control.
- the sample mounting section 5104 may be configured such that the position of the biological sample on the sample mounting section can be fixed, and may be a so-called stage.
- the sample mounting section 5104 can be configured to move the position of the biological sample in the optical axis direction of the objective lens and/or in a direction perpendicular to the optical axis direction.
- the information processing section 5120 can acquire data (such as imaging data) acquired by the microscope device 5100 from the microscope device 5100 .
- the information processing section can perform image processing on the imaging data.
- the image processing may include color separation processing.
- the color separation process is a process of extracting data of light components of a predetermined wavelength or wavelength range from the captured data to generate image data, or removing data of light components of a predetermined wavelength or wavelength range from the captured data. It can include processing and the like.
- the image processing may include autofluorescence separation processing for separating the autofluorescence component and dye component of the tissue section, and fluorescence separation processing for separating the wavelengths between dyes having different fluorescence wavelengths.
- autofluorescence signals extracted from one may be used to remove autofluorescence components from image information of the other specimen.
- the information processing section 5120 may transmit data for imaging control to the control section 5110, and the control section 5110 receiving the data may control imaging by the microscope apparatus 5100 according to the data.
- the information processing section 5120 may be configured as an information processing section such as a general-purpose computer, and may include a CPU, RAM, and ROM.
- the information processing section may be included in the housing of the microscope device 5100 or may be outside the housing. Also, various processes or functions by the information processing unit may be realized by a server computer or cloud connected via a network.
- the image acquired by the signal acquisition unit 5103 may be a stained image and/or a non-stained image.
- the signal acquisition unit may acquire information about the cells before, during, and after processing as feature amounts from the image. A specific example of the information on the cell is as described later.
- a stained image is, for example, a fluorescent image obtained by irradiating excitation light from the light irradiation unit 5101 to a biological sample S that has been stained with a fluorescent reagent.
- the unstained image may be a bright-field image, a phase-contrast image, or a polarized image obtained from an unstained biological sample S.
- the non-stained image may be an image that is pseudo-stained for each feature of a cell that is identified from information learned from the non-stained image and the fluorescent image.
- the pseudo-stained images can be used to predict various labels such as nuclei, cell types (neural, etc.), cell states (cell death, etc.) from unstained images, and chemically stained fluorescence spectra can be predicted. It is possible to eliminate the restriction on the number of simultaneous labels due to overlap.
- the specific technique of the pseudo-stained image is not particularly limited as long as it is a known technique, and includes the following techniques (Cell. 2018 Apr 19; 173(3): 792-803. e19. doi: 10.1016/j.cell.2018.03.040. Epub 2018 Apr 12.).
- the biological sample analyzer 6100 shown in FIG. 8 includes a light irradiation unit 6101 that irradiates light onto the biological sample S flowing through the channel C, a detection unit 6102 that detects the light generated by the irradiation, and detection by the detection unit. It includes an information processing unit 6103 that processes information about the received light. Examples of the biological sample analyzer 6100 include, for example, flow cytometers and imaging cytometers.
- the biological sample analyzer 6100 may include a sorting section 6104 that sorts out specific biological particles P in the biological sample.
- a cell sorter can be given as an example of the biological sample analyzer 6100 including the sorting unit.
- the biological sample S may be a liquid sample containing biological particles.
- the bioparticles are, for example, cells or non-cellular bioparticles.
- the cells may be living cells, and more specific examples include blood cells such as red blood cells and white blood cells, and germ cells such as sperm and fertilized eggs.
- the cells may be directly collected from a specimen such as whole blood, or may be cultured cells obtained after culturing.
- Examples of the noncellular bioparticles include extracellular vesicles, particularly exosomes and microvesicles.
- the bioparticles may be labeled with one or more labeling substances (eg, dyes (particularly fluorescent dyes) and fluorescent dye-labeled antibodies). Note that particles other than biological particles may be analyzed by the biological sample analyzer of the present disclosure, and beads or the like may be analyzed for calibration or the like.
- the flow path C can be configured so that the biological sample flows, particularly such that a flow in which the biological particles contained in the biological sample are arranged substantially in a line is formed.
- the flow path structure including the flow path C may be designed to form a laminar flow, and in particular, a laminar flow in which the flow of the biological sample (sample flow) is surrounded by the flow of the sheath liquid is formed. Designed.
- the design of the flow channel structure may be appropriately selected by those skilled in the art, and known ones may be adopted.
- the channel C may be formed in a flow channel structure such as a microchip (a chip having channels on the order of micrometers) or a flow cell.
- the width of the channel C may be 1 mm or less, and particularly 10 ⁇ m or more and 1 mm or less.
- the channel C and the channel structure including it may be made of a material such as plastic or glass.
- the apparatus of the present disclosure may be configured such that the biological sample flowing in the flow path C, particularly the biological particles in the biological sample, is irradiated with light from the light irradiation unit.
- the apparatus of the present disclosure may be configured such that the light irradiation point (interrogation point) for the biological sample is in the channel structure in which the channel C is formed, or the light irradiation point is It may be configured to be external to the channel structure.
- the former there is a configuration in which the light is applied to the channel C in the microchip or the flow cell. In the latter, the light may be applied to the bioparticles after exiting the flow path structure (especially the nozzle section thereof).
- the light irradiation section 6101 includes a light source section that emits light and a light guiding optical system that guides the light to the flow path C. As shown in FIG.
- the light source section includes one or more light sources.
- the type of light source can be, for example, a laser light source or an LED.
- the wavelength of light emitted from each light source may be any wavelength of ultraviolet light, visible light, or infrared light.
- the light guiding optics include optical components such as beam splitter groups, mirror groups or optical fibers.
- the light guide optics may also include a lens group for condensing light, for example an objective lens.
- the number of light irradiation points on the biological sample may be one or more.
- the light irradiator 5101 may be configured to converge light irradiated from one or different light sources to one irradiation point.
- the detection unit 6102 includes at least one photodetector that detects light generated by light irradiation of the particles by the light irradiation unit.
- the light to be detected is, for example, fluorescence or scattered light (eg, any one or more of forward scattered light, backscattered light, and side scattered light).
- Each photodetector includes one or more photodetectors, such as a photodetector array.
- Each photodetector may include one or more PMTs (photomultiplier tubes) and/or photodiodes such as APDs and MPPCs as light receiving elements.
- the photodetector includes, for example, a PMT array in which a plurality of PMTs are arranged in a one-dimensional direction.
- the detection unit may include an imaging device such as a CCD or a CMOS.
- the detection unit can acquire an image of the bioparticle (for example, a bright-field image, a dark-field image, a fluorescence image, etc.) using the imaging element.
- the detection unit includes a detection optical system that causes light of a predetermined detection wavelength to reach the corresponding photodetector.
- the detection optical system includes a spectroscopic section such as a prism or a diffraction grating, or a wavelength separating section such as a dichroic mirror or an optical filter.
- the detection optical system may be configured, for example, to disperse the light from the biological particles and detect light in different wavelength ranges with a plurality of photodetectors, the number of which is greater than the number of fluorescent dyes.
- a flow cytometer including such a detection optical system is called a spectral flow cytometer.
- the detection optical system may be configured to separate light corresponding to the fluorescence wavelength range of the fluorescent dye from light from the biological particles, and cause the separated light to be detected by the corresponding photodetector.
- the detection unit may include a signal processing unit that converts the electrical signal obtained by the photodetector into a digital signal.
- the signal processing unit may include an A/D converter as a device that performs the conversion.
- a digital signal obtained by conversion by the signal processing unit can be transmitted to the information processing unit.
- the digital signal can be handled as data related to light (hereinafter also referred to as "optical data") by the information processing section.
- the optical data may be optical data including fluorescence data, for example. More specifically, the light data may be light intensity data, and the light intensity may be light intensity data of light containing fluorescence (which may include feature amounts such as Area, Height, Width, etc.) good.
- the information processing unit 6103 includes, for example, a processing unit that processes various data (for example, optical data) and a storage unit that stores various data.
- the processing unit can perform fluorescence leakage correction (compensation processing) on the light intensity data.
- the processing unit performs fluorescence separation processing on the optical data and acquires light intensity data corresponding to the fluorescent dye.
- the fluorescence separation process may be performed, for example, according to the unmixing method described in JP-A-2011-232259.
- the processing unit may acquire morphological information of the biological particles based on the image acquired by the imaging device.
- the storage unit may be configured to store the acquired optical data.
- the storage unit may further be configured to store spectral reference data used in the unmixing process.
- the information processing unit can determine whether to sort the biological particles based on the optical data and/or the morphological information. Then, the information processing unit can control the sorting unit based on the result of the determination, and the sorting unit can sort the bioparticles.
- the information processing section may be configured to be able to output various data (for example, optical data and images). For example, the information processing section can output various data (for example, two-dimensional plots, spectrum plots, etc.) generated based on the optical data. Further, the information processing section may be configured to be able to receive input of various data, for example, it receives gating processing on the plot by the user.
- the information processing unit may include an output unit (such as a display) or a user interface (such as a keyboard) for executing the output or the input.
- the information processing section may be configured as a general-purpose computer, and may be configured as an information processing section including, for example, a CPU, RAM, and ROM.
- the information processing section may be included in the housing in which the light emitting section and the detecting section are provided, or may be outside the housing. Also, various processes or functions by the information processing unit may be realized by a server computer or cloud connected via a network.
- the sorting unit 6104 can sort the bioparticles according to the determination result by the information processing unit, for example.
- the sorting method may be a method of generating droplets containing bioparticles by vibration, applying an electric charge to the droplets to be sorted, and controlling the traveling direction of the droplets with electrodes.
- the sorting method may be a method of sorting by controlling the advancing direction of the bioparticles in the channel structure.
- the channel structure is provided with a control mechanism, for example, by pressure (jetting or suction) or electric charge.
- a chip having a channel structure in which the channel C branches into a recovery channel and a waste liquid channel downstream thereof, and in which specific biological particles are recovered in the recovery channel. for example, the chip described in 2020-76736).
- Fig. 9 shows an example of a flow chart of cell processing of this technology.
- the processing method of the present technology may include a sample preparation step S100, an information acquisition step S110 regarding cells before treatment, an estimation step S120, a processing step S130, and an information acquisition step S140 regarding cells after treatment. . These steps are described below.
- the cell culture section 1 prepares a cell group containing target cells.
- the type of target cells is not particularly limited, and may be any of human-derived cells, immune cells, animal-derived cells, plant-derived cells, microorganism-derived cells, cancer cells, normal cells, stem cells, epithelial cells, and organoids.
- target cells include cells in blood and cells collected from living tissue.
- the target cells may be either adherent cells or non-adherent cells.
- the cell group may be peripheral blood mononuclear cells (PBMC: Peripheral blood mononuclear cells) collected from a patient or donor.
- PBMC peripheral blood mononuclear cells
- the PBMC are composed of various immune cell groups, including T cells, B cells, macrophages, and the like.
- the T cells may be further composed of T cell subsets including naive T cells, central memory T cells, effector T cells, and the like.
- the sample preparation step S100 may include a sample loading step S101.
- the cell group including the target cells input from the cell input unit 106 of the cell culture unit 1 is trapped in the culture vessel 101 by the first molecules that can bind to the cells.
- non-target cells may be recovered from the waste liquid reservoir 112 or the cell recovery section 113 without being trapped in the culture vessel 101 .
- the sample preparation step S100 can include a second molecule supply step.
- the target cells captured in the culture vessel 101 can be combined with the second molecules supplied from the second molecule supplying section.
- the supplied second molecule may be, for example, a fluorescent reagent, which enables the measurement unit 3 to distinguish target cells. Note that target cells that are not bound to the second molecule and are not identified as target cells by the measurement unit 3 may be treated in a treatment step described later and recovered from the waste liquid storage unit 112 or the cell recovery unit 113. .
- the identification may be performed by the information processing section 2 .
- the information processing section 2 drives the optical control section 210 based on the identification result.
- An optical controller 210 may perform the optical stimulation.
- the sample preparation step S100 may include an environment control step.
- the environment control step the environment of the culture vessel 101 containing cells before treatment is controlled by the environment control unit.
- the culture container 101 receives the physicochemical environment control by the environment control unit, and the physicochemical conditions such as humidity, pH, osmotic pressure, oxygen partial pressure, and carbon dioxide partial pressure are supplied from the physicochemical environment supply unit 114 .
- An environment may be supplied.
- the culture vessel 101 is subjected to physiological environment control by the environment control unit, and at least one of the activating agent supply unit 108, the gene supply unit 109, and the culture medium supply unit 110 supplies a stimulating factor, a culture It may be supplied with a physiological environment such as fluids, hormones, cytokines, interleukins.
- a physiological environment such as fluids, hormones, cytokines, interleukins.
- an optimal environment is provided for the target cells in the culture environment, and the viability and/or culture efficiency of the cells can be increased.
- the optimal physiological environment is provided for the target cells under the culture environment, and the cell culture efficiency can be improved.
- the environmental control process may be appropriately performed not only in the sample preparation process but also in the processes before and after the sample preparation process.
- the information processing section 2 obtains information about the target cells before treatment prepared in the sample preparation process.
- FIG. 11 shows an example of a flow chart of the information acquisition process regarding cells before treatment according to the present technology.
- the pre-treatment cell information acquisition step S110 may include a pre-treatment cell measurement step.
- the measurement unit 3 (especially the image acquisition unit and/or the signal detection unit) acquires image information and/or signal information. From the acquired image information and/or signal information, it is possible to extract information about the target cells before treatment.
- the image information and/or signal information may be information from a second molecule, such as a fluorescent reagent, imparted in the sample preparation step.
- the information on the unprocessed cells extracted by the measurement unit 3 is at least one of, for example, the configuration, morphology, state, number, ratio, type, growth rate, survival rate, genetic information, and molecular information of the cells.
- Information about the molecule includes, but is not limited to, gene expression control factors such as transcription factors and transcription control factors, molecular marker information, cell surface antigen information, sequence information, molecular weight, type, and the like.
- Information about the cell may be transmitted to the estimation unit 300 after being acquired by the measurement unit 3 . Furthermore, the information about the cell may be transmitted to the database 500 of the information processing section 2 and the database 500 may be updated.
- the information acquisition step S110 regarding cells before treatment may include a predetermined condition acceptance step.
- the information processing section 2 may include a step of receiving information regarding target cells after predetermined processing conditions or predetermined processing. Information about the target cells after the predetermined treatment conditions and the predetermined treatment may be received by a user interface appropriately set in the information processing section. As a result, in the estimation step described later, it is possible to estimate the processing conditions for obtaining the user's desired information regarding the processed cells and the desired processing conditions. Further, information regarding subject cells after predetermined treatment conditions and predetermined treatments may be obtained from the database 500 and/or an external database with threshold values.
- the initial cells are recollected again or production is discontinued, and if the number of cells meets the threshold, cell processing is performed. You can decide to continue.
- the information processing unit 2 may further include a step of accepting information regarding approval of the commercialized cell as a threshold value from the database 500 and/or an external database.
- a step of accepting information regarding approval of the commercialized cell as a threshold value from the database 500 and/or an external database.
- the information on approval of the cells can be appropriately selected from information on cells, treatment conditions for cells, and information on treatments.
- Information on approval of the cell can be received by a user interface appropriately set in the information processing section 2 .
- the estimation unit may set the information regarding the predetermined cell and/or the predetermined processing condition based on the information regarding approval of the cell.
- the treatment conditions may include culture conditions related to at least one of stimulating factors and culture days. Further, the designated predetermined processing condition may be cell sorting or cell culture control processed by the control unit 200, as described later.
- the information about the target cells after treatment may be information about the treatment of the cells in addition to the information about the cells before treatment described above.
- the information on treatment may be the therapeutic effect of the cells on the patient, response rate, recurrence rate, side effects, and treatment history of the patient.
- the learning step to be described later the information about the treated cells is learned to obtain the information about the treatment, and it becomes possible to perform the cell configuration and treatment according to the individual patient.
- Information regarding the target cell after the predetermined processing conditions or the predetermined processing received by the information processing unit 2 may be sent to the estimation unit 300 and/or the database 500 as appropriate.
- the estimating unit 300 collects information about the target cells before processing acquired in the cell measurement step before processing, and information about target cells after predetermined processing conditions and predetermined processing obtained in the predetermined condition receiving step. Based on at least one of the above, processing conditions that can derive the cell group to information on predetermined cells, or information on cells after processing of the cell group derived by the predetermined processing conditions, as an estimated condition presume.
- the estimation condition is a "processing condition capable of deriving the cell group into the information about the predetermined cell" generated by the estimation process by the estimation unit, or generated by the estimation process by the estimation unit Alternatively, it may be "information about the treated cells of the cell group derived under the predetermined treatment conditions". That is, the estimated conditions may mean information about estimated treatment conditions or estimated cells.
- the processing conditions under which the cell group can be derived to the information on the predetermined cell are the processing conditions that the control unit 200 can derive in order to reach the information on the predetermined cell specified in the predetermined condition receiving step, which will be described later.
- it may be cell sorting or culture conditions, as described in .
- the information about the treated cells of the cell group derived under the predetermined treatment conditions refers to the information about the treated cells that can be obtained by the control unit 200 executing a predetermined process designated by a user or the like.
- the predetermined processing specified by the user or the like is not particularly limited as long as it is a processing condition in the processing steps described later.
- Information about the treated cells is not particularly limited as long as it is as described above.
- the information about the treated cells may include at least one of composition, condition, number, ratio, increase rate, survival rate, response rate, recurrence rate, and side effects of the treated cells.
- the estimation step S120 may include an estimation condition generation step.
- the estimation condition generating step the estimating unit 300 generates the cell group based on the information about the target cells before processing acquired in the cell measurement step before processing and the predetermined processing conditions acquired in the predetermined condition receiving step. to generate information about the cells after the treatment of Alternatively, the estimating unit 300 performs a predetermined calculation based on the information regarding the target cells before processing acquired in the cell measurement step before processing and the information regarding the target cells after predetermined processing acquired in the predetermined condition receiving step.
- a processing condition capable of deriving the cell group is generated in the information about the cell.
- the estimating unit 300 may acquire information about the target cells before processing from the measuring unit 3 and/or the database 500. Furthermore, the estimating section 300 may acquire the user's desired information regarding the processed cells and desired processing conditions from at least one of the database 500 , an external database, and the user interface of the information processing section 2 .
- the estimation unit 300 may further generate an inference condition using either one of the first learning device and the second learning device generated by the learning unit 400 in the learning process described later.
- the estimating step means a step of performing a process for generating information about the derivable treatment conditions or the treated cells based on information about the target cell, i.e. reasoning in the field of machine learning It includes processing. That is, the estimation process may be referred to herein as the "inference process.” Also, within this specification, the presumed condition may be referred to as an "inference condition.”
- the estimation step S120 may include an estimation condition output step.
- the estimation unit 300 outputs the estimated condition generated in the estimated condition generation process.
- the output condition is not particularly limited as long as it is the estimated condition generated in the estimated condition generating step.
- the estimation condition may be presented to the user via a user interface appropriately set in the information processing section 2 . This allows the user to visually recognize the output conditions.
- the output estimation conditions may be transmitted to the database 500 and the database 500 may be updated. Further, the output estimated condition may be transmitted to the control unit 200 of the cell culture unit 1, and the control unit 200 can process the target cells inside the cell culture unit 1 based on the output condition. It becomes possible.
- the control unit processes the sample containing the cells based on the information on the cells acquired in the information acquisition step on the cells before processing and the estimation conditions output in the estimation step.
- a sample containing cells for example, cells before processing supplemented in a cell culture device may be subjected to cell sorting or culture control.
- Cell sorting is, for example, a process of stimulating a degradable linker by optical control by the optical control section and releasing cells bound to the sample holding section 100 via the degradable linker.
- Cells that can be processed and non-target cells are discriminated based on the information on the cells acquired in the step of acquiring information on the cells before treatment, for example, the fluorescence signal derived from the second molecule attached to the cells, and only the non-target cells can be released by the stimulus.
- Based on pseudo-stained images for each cell feature identified from information learned from bright-field images, phase-contrast images, polarized images, and non-stained and fluorescent images without using a second molecule Cells may be identified and released by photostimulation.
- the identification may be performed by the information processing section 2 .
- the information processing section 2 can drive the optical control section based on the identification result.
- the optical controller may perform optical stimulation.
- the culture control is, for example, a process of culturing a sample containing cells bound to the sample holding unit 100 under environmental control by the environment control unit.
- the culture vessel 101 is subjected to feedback control by the environment control unit based on the cell information acquired in the cell information acquisition step before treatment, and the physicochemical environment supply unit 114 provides humidity, pH, and osmotic pressure. , oxygen partial pressure, carbon dioxide partial pressure, and the like.
- the culture vessel 101 is subjected to feedback control by the environment control unit based on the information on the cells acquired in the information acquisition step on the cells before treatment, and the activator supply unit 108, the gene supply unit 109, the culture Physiological environments such as stimulating factors, transcription factors, transcription control factors, culture fluids, hormones, cytokines, and interleukins may be supplied from at least one of the fluid supply units 110 .
- the environment control unit based on the information on the cells acquired in the information acquisition step on the cells before treatment
- the activator supply unit 108, the gene supply unit 109, the culture Physiological environments such as stimulating factors, transcription factors, transcription control factors, culture fluids, hormones, cytokines, and interleukins may be supplied from at least one of the fluid supply units 110 .
- the CD8-positive cells proliferate significantly, whereas when the anti-CD3/CD28 antibody is added, , the proportion of CD4 and CD8 positive cells can be maintained while proliferating. Furthermore, depending on the medium, cytokines, and/or cytokine types and concentrations, the percentage of T cell subsets after a given number of days of culture may vary.
- the environment control unit controls the activator supply unit 108 to supply only anti-CD3 antibody into the culture vessel in the initial culture process. sell. This increases the proportion of CD8-positive cells within the cell population. Then, when the measurement unit 3 determines that the ratio of CD8-positive cells has reached the target value, the environment control unit stops the supply of anti-CD3 antibody by the activator supply unit 108. Alternatively, the activator supply unit 108 may be controlled. In this way, the environment control unit controls the activator supply unit 108 to supply the activator into the culture vessel so as to increase or decrease the proportion of one or more predetermined cells in the cell group. sell.
- the environment control unit can control the activator supply unit 108 to supply an activator into the culture vessel so as to increase or decrease the viability of one or more predetermined cells in the cell group. . Furthermore, the environment control unit controls the activator supply unit 108 to supply the activator into the culture vessel so as to increase or decrease the gene transfer efficiency of one or more predetermined cells in the cell group. I can.
- the environment controller may control the activator supply unit 108 to additionally supply anti-CD28 antibody into the culture vessel.
- the cell group can be grown while maintaining the ratio of CD4 and CD8 positive cells in the cell group.
- the environment control unit supplies the culture solution and the cytokine supplied by the activator supply unit 108 Activator supply 108 may be controlled to change the type and/or concentration of . In this way, the environmental control unit can control the activator supply unit 108 to supply the activator into the culture vessel so as to maintain the proportion of one or more predetermined cells in the cell group.
- the processing conditions processed by the cell sorting and/or culture control may be transmitted to the database 500 and the database 500 may be updated. This improves the accuracy of generating the estimated condition in the estimated condition generating step.
- the contents processed by the cell sorting and/or culture control may store dates and periods such as the number of culture days, culture solution replenishment or replacement dates, and the like.
- processing step S130 may include processing decision step S131.
- the control section executes processing determination based on the predetermined condition acquired in the predetermined condition receiving step and the estimated condition output in the estimation step.
- the predetermined condition and/or the estimated condition may also be presented from a user interface of the information processing section 2 that can be input by the user.
- Subsequent processing conditions may be executed based on predetermined conditions and/or estimated conditions selected by the user.
- the user interface may present an indicator that enables determination of whether or not to proceed to subsequent processing conditions such as cell culture or cell sorting. Thereby, the user can set the processing conditions via the user interface as necessary, and the information processing section can execute the designated processing.
- the control unit 200 can proceed to the subsequent processing execution step (for example, the culturing step). It is possible to appropriately select whether unnecessary cells are removed by . As a result, it is possible to determine whether or not the processing can be executed before the control unit 200 starts the processing, and the process can be stopped before reaching the final step of the cell processing system, thereby improving productivity.
- the control unit may control to stop culturing the cell group and deliver the cells to the waste liquid reservoir.
- the control unit may control to continue culturing the cell group and collect new cells from the cell input unit 106 .
- the user interface may be provided with an input section that can select whether or not to proceed to cell culture or cell sorting in the latter stage, for example.
- the processing step S130 may include a processing execution step S132 (eg, culturing step). As described above, in the culturing step, the control section cultures the sample containing the cells bound to the sample holding section 100 under the environmental control by the environment control section.
- a processing execution step S132 eg, culturing step.
- the processing step S130 may include an in-process cell information acquisition step S133 (for example, a measurement step).
- the control unit controls the measurement unit 3 to start measurement, and acquires information about the cells being processed.
- the measuring method by the measuring unit 3 is not particularly limited as long as it is as described above. By acquiring information about cells over time, it becomes possible to constantly observe cells and immediately detect abnormalities in cells.
- Information related to the treatment is the same as the information related to the cells before treatment described above, and is not particularly limited. Information about the cells under treatment may be sent to database 500 and database 500 may be updated.
- the PBMCs can be measured by the measurement unit 3 having the image acquisition unit 600 and/or the signal detection unit 700 .
- the lymphocyte fraction is identified, and from the information on the fluorescence of the target cells stained with fluorescence and/or metal-labeled antibodies, T cells , B cells, and macrophages; T cell subsets such as naive T cells, central memory T cells, and effector T cells; and information on nuclear staining of the target cells.
- the PBMCs may be obtained from pseudo-stained images for each cell feature identified from information learned from non-stained images and fluorescent images.
- cell information can be obtained during the treatment process, it is possible to omit the transfer process of selecting the cells from the incubator in the treatment process and the measurement process after the extraction.
- the measurement process it is possible to analyze the growth state of cells from the information on the size and number of cell clusters obtained from the measurement unit 3 . For example, T cells may create cell clumps during cell proliferation.
- the processing step S130 may include a comparison step S134.
- the control unit 200 compares the information about the cells being processed acquired in the cell-in-process information acquisition step S133 with the predetermined condition acquired in the predetermined condition reception step, and executes processing determination. For example, if the information about the cells being processed satisfies a predetermined condition, the control unit 200 can proceed to the subsequent culturing step, but if the predetermined condition is not satisfied, the selection step removes unnecessary cells. Alternatively, a manufacturing discontinuation step of controlling the control unit to stop manufacturing cells or controlling the control unit to re-collect cells can be selected as appropriate. As a result, by observing the information about the cells being processed from the measurement unit 3 over time, it is possible to switch the contents of the process during the process and perform the optimization process.
- the measurement unit 3 acquires post-treatment cell information.
- the cell group is recovered from the cell recovery unit.
- the collected cells may be evaluated for treatment information by the information processing unit, or may be evaluated by an evaluation device outside the system.
- Information regarding the evaluated post-treatment cell therapy may be sent to the database 500 after evaluation, and the database 500 may be updated.
- the information about the subject cells after treatment may be information about the treatment of the cells in addition to the information about the cells before treatment as described above.
- the information on treatment may be the therapeutic effect of the cells on the patient, response rate, recurrence rate, side effects, and treatment history of the patient.
- the learning step to be described later the information about the treated cells is learned to obtain the information about the treatment, and it becomes possible to perform the cell configuration and treatment according to the individual patient.
- a cell processing method may further comprise a learning step.
- the learning unit 400 learns the relationship between the information on the cell and the information on the treatment of the cell, and generates the first learner.
- the learning unit 400 learns the relationship between information about cells and processing conditions to generate a second learner. This makes it possible to estimate the treatment conditions for achieving the desired cell population and the desired therapeutic effect of the cells from the information on the cells before treatment in the cell population, and increase the efficiency of the cell treatment process.
- the estimation unit may use the generated first learner and/or second learner to perform the estimation process described above.
- the first learning device uses information about cells processed under the processing conditions estimated by the estimating unit 300 and information about treatment of the cells as input information for learning, to learn. Information regarding post-treatment cells and post-treatment treatment of cells is provided above.
- the estimating unit 300 may make an inference using a learner generated by the learner. This also makes it possible to predict the optimal cell composition according to the patient.
- the PBMC are used for therapeutic purposes.
- the information on the treated cell group such as the cell composition, number, and state of the PBMC and the information on the treatment such as donor information, treatment success rate, side effect rate, and cell quality. It is also possible to optimize the timing of collecting PBMCs. This makes it possible to estimate the treatment conditions for achieving the desired cell population and the desired therapeutic effect of the cells from the information on the cells before treatment in the cell population, and increase the efficiency of the cell treatment process. .
- the second learning device uses the information about the unprocessed cells, the processing conditions estimated by the estimation unit 300, and the unprocessed cells processed according to the processing conditions as input information for learning, Learn the relationship between the information about the cells before treatment and the treatment conditions.
- the treatment conditions are not particularly limited as long as they are conditions for treatment in the treatment process. This makes it possible to estimate the treatment conditions for achieving the desired cell population and the desired therapeutic effect of the cells from the information on the cells before treatment in the cell population, and increase the efficiency of the cell treatment process.
- the estimating unit 300 may make an inference using a learner generated by the learner. This allows estimation of treatment conditions and treatment efficacy.
- the first learner may be a learner generated by machine-learning a data set containing information about cells and information about treatment of the cells.
- the machine learning may be, for example, deep learning.
- the machine learning may be performed, for example, according to the information processing apparatus or information processing method described in WO2021/049365.
- the information about the cell may be treated as an explanatory variable, and the information about the treatment of the cell may be treated as an objective variable.
- the second learning device stores information about the cells before the treatment, the treatment conditions, and information about the cells before the treatment that have been treated under the treatment conditions (that is, information about the cells after the treatment). It may be a learner generated by machine-learning the containing dataset.
- the machine learning may be, for example, deep learning.
- the machine learning may be performed, for example, according to the information processing apparatus or information processing method described in WO2021/049365.
- the information about the cells before the treatment and the treatment conditions may be treated as explanatory variables, and the information about the cells after the treatment may be treated as objective variables.
- Such handling of explanatory variables and objective variables may be applied, for example, in an embodiment in which the estimation unit estimates information about cells after processing of the cell group.
- the information about the cells before the treatment and the information about the cells after the treatment may be treated as explanatory variables, and the treatment conditions may be treated as objective variables.
- explanatory variables and objective variables may be applied, for example, to an embodiment in which the estimation unit estimates processing conditions for deriving information about the predetermined cell from the cell group.
- FIG. 14 is a schematic diagram schematically showing a configuration example of a cell processing system 1000 according to the present technology.
- the cell processing system 1000 has a terminal device 10, an information processing device 20, a first terminal 30, and a second terminal 40, as shown in FIG. 14, for example.
- Each of the terminal devices 10 is connected to the observation device 202 by wire or wirelessly.
- the terminal device 10, the information processing device 20 (corresponding to the information processing unit 2 described above), the first terminal 30, and the second terminal 40 are connected via the network N so as to be able to communicate with each other.
- the network N may be, for example, the Internet, a mobile communication network, a local area network, or the like, or may be a network in which a plurality of these types of networks are combined.
- the terminal device 10 is composed of a plurality of gateway terminals 10a, and these gateway terminals 10a are each connected to the observation device 202 via the control recording PC 205 (see FIG. 15) wirelessly or by wire. be done.
- Observation device 202 is handled by a user of the cell processing system.
- the cell processing system 1000 of the present embodiment typically, as shown in FIG. Although it is configured to be connected to the information processing device 20 , it is not limited to this, and a single viewing device 202 may be configured to be connected to the information processing device 20 via the terminal device 10 .
- FIG. 15 A configuration example of the observation device 202 will be described with reference to FIG. 15 .
- the X, Y, and Z axes shown in FIG. 15 are three axial directions orthogonal to each other.
- the observation device 202 is the same as in 1. above. and 2.
- the cell culture unit 1 and the measurement unit 3 described in 1 are provided.
- the cell culture unit 1 and the measurement unit 3 may be configured integrally, for example.
- the cell culture unit 1 may be configured as an incubator that incubates cells.
- a physico-chemical environment supply unit 203 and a detection unit 204 are included in the incubator.
- Cell culture unit 1 further includes culture vessel group 2023 .
- the physico-chemical environment supply unit 203 is configured to control, for example, one or more of humidity, temperature, and gas within the incubator.
- the measurement unit 3 may be configured to observe cells in the incubator, and may be configured as a microscope system, for example. In this case, the measurement unit 3 may include the image acquisition unit. Moreover, the measurement unit 3 may be configured as, for example, a biological sample analyzer. In this case, the measurement section may include the signal detection section.
- the components included in the cell culture section 1 and measurement section 3 are connected to a control recording computer (PC) 205 .
- the control recording PC 205 is also connected to the display device 206 and the input section 207 .
- the incubator accommodates a measurement unit 3, a physicochemical environment supply unit 203, and a detection unit 204. As shown in FIG.
- the incubator may be configured as a culture device for culturing cells.
- the incubator has a function of adjusting the internal temperature, humidity, etc. to predetermined values by means of the physicochemical environment supply unit 203 housed therein.
- the incubator is configured to allow any gas to flow into the incubator by means of the physicochemical environment supply unit 203 .
- the type of gas is not particularly limited, it is, for example, nitrogen, oxygen, or carbon dioxide.
- the measuring section 3 has an imaging section 2021 and a light source 2022 .
- the imaging unit 2021 may be configured to capture an image of the cells housed in the culture container 2023 (dish) and generate an observation image of the cells, or may be configured to be able to acquire signals from the cells. .
- the first molecule described in (3-1) above may be immobilized on the culture vessel 2023, as indicated by E in FIG. The description in the upper level (3-1) also applies to the culture vessel 2023.
- the imaging unit 2021 includes a lens barrel including a lens group that can move in the optical axis direction (Z-axis direction), and a CMOS (Complementary Metal Oxide Semiconductor) or CCD (Charge Coupled Device) that captures subject light passing through the lens barrel. and a driving circuit for driving them.
- CMOS Complementary Metal Oxide Semiconductor
- CCD Charge Coupled Device
- the imaging unit 2021 is configured to be movable in the optical axis direction (Z-axis direction) and in the horizontal direction (direction perpendicular to the Z-axis direction), and images the cells housed in the culture container 2023 while moving in the horizontal direction. . Further, the imaging unit 2021 may be configured to be capable of capturing not only still images but also moving images.
- the imaging unit 2021 is, for example, a visible light camera, but is not limited to this, and may be an infrared (IR) camera, a polarization camera, or the like.
- IR infrared
- the light source 2022 irradiates the culture container 2023 with light when the imaging unit 2021 images the cells in the culture container 2023 .
- the light source 2022 employs, for example, an LED (Light Emitting Diode) that emits light of a specific wavelength.
- an LED Light Emitting Diode
- the light source 2022 is an LED, for example, a red LED that emits light with a wavelength of 640 nm is adopted.
- the culture container 2023 can be arranged between the imaging unit 2021 and the light source 2022 .
- the observation stage S is configured to allow transmission of the light emitted by the light source 2022 .
- the light source 2022 may be arranged so as to irradiate the inside of the container 2023 with light from the imaging unit 2021 side.
- Materials constituting the culture vessel 2023 are not particularly limited, but for example, inorganic materials such as glass or silicon, polystyrene resins, polyethylene resins, polypropylene resins, ABS resins, nylons, acrylic resins, fluororesins, polycarbonate resins, polyurethane resins, It is made of an organic material such as methylpentene resin, phenol resin, melamine resin, epoxy resin, vinyl chloride resin, or the like, and is a transparent body through which the light emitted by the light source 2022 is transmitted.
- the culture vessel 23 may be made of the materials listed above except for the portion through which the light emitted by the light source 2022 is transmitted, or may be made of a metal material.
- the physicochemical environment supply unit 203 controls the temperature and humidity inside the incubator and the gas introduced into the incubator, and creates an environment suitable for culturing cells.
- the physicochemical environment supply unit 203 can control the temperature in the incubator to any temperature between 20°C and 50°C, for example.
- the detection unit 204 is connected to the control recording PC 205 wirelessly or by wire, and is configured to detect the temperature, pressure, illuminance of the light source 2022, oxygen concentration, etc. in the incubator and output them to the control recording PC 205.
- the detection unit 204 is, for example, a solar panel type or battery type IoT (Internet of Things) sensor or the like, and the type thereof does not matter.
- the control recording PC 205 is connected to the imaging unit 2021, the light source 2022, the physicochemical environment supply unit 203, the detection unit 204, and the gateway terminal 10a.
- the control recording PC 205 is configured to be able to control the cell culture environment by controlling the imaging unit 2021, the light source 2022, the detection unit 204, and the physicochemical environment supply unit 203 based on their outputs.
- the control recording PC 205 stores culture environment information output from the detection unit 204, and is configured to be able to transmit this culture environment information to the gateway terminal 10a.
- the culture environment information of the present embodiment is, for example, information about the pH of the culture solution, and the temperature, humidity, and oxygen concentration in the incubator, and has the same meaning in the following description.
- the gateway terminal 10a Upon receiving the culture environment information, the gateway terminal 10a acquires, as the culture environment information, information on at least one of the pH of the culture solution and the temperature, humidity, and oxygen concentration in the incubator 24 (see FIG. 16). ). The acquisition unit 24 outputs the acquired culture environment information to the storage unit 28 (see FIG. 16), and the storage unit 28 stores the culture environment information.
- control recording PC 205 stores information on cells, information on the culture environment, information on the culture container 2023a, or information on the above 1. and 2. Stores various information and the like described in .
- the control recording PC 205 is configured to be able to transmit these pieces of information to the gateway terminal 10a.
- the display device 206 displays observation images captured by the imaging unit 2021, information about cells, culture environment information, or the above 1. and 2. It is configured to be able to display the various information described in .
- the display device 206 is, for example, a display device using liquid crystal, organic EL (Electro-Luminescence), or the like.
- the input unit 207 is an operation device such as a keyboard or mouse for inputting operations by the user.
- the input unit 207 according to this embodiment may be a touch panel or the like configured integrally with the display device 206 .
- the terminal device 10 of the present embodiment is preferably composed of a plurality of gateway terminals 10a from the viewpoint of improving the analysis accuracy of the information processing device 50. may be configured.
- the single gateway terminal 10a may be connected to a plurality of observation devices 202 wirelessly or by wire via the PC 205 for control recording.
- the gateway terminal 10a is typically a general-purpose gateway configured to be capable of mutually converting different protocols and address systems, but is not limited to this, and is a PC (Personal Computer) set to act as a gateway. ) and the like.
- PC Personal Computer
- FIG. 16 is an example of a block diagram of the information processing device 20 according to this embodiment.
- the information processing device 20 can include a CPU (Central Processing Unit) 21 as shown in the figure.
- the above-described information processing (for example, the estimation step and/or the learning step) may be executed by the CPU 21 .
- the CPUD 21 performs the above 1. and 2. is configured to perform the functions of the estimation unit 300, the learning unit 400, and the database 500 described in .
- the information processing device may also include a database 500 .
- the information processing device 20 further includes hardware necessary for a computer, such as a ROM (Read Only Memory) 25 and a RAM (Random Access Memory) 26 .
- Database 500 may reside in ROM 25 or RAM 26, for example.
- the CPU 21 loads, for example, a program stored in the ROM 25 into the RAM 26 for causing the information processing apparatus 20 to execute information processing according to the present technology, and executes the program. Thereby, each block operation of the information processing device 20, which will be described later, is controlled.
- the ROM 25 is a memory device in which various data and programs used in the information processing apparatus 20 are fixedly stored.
- the ROM 25 may store a program executed by the CPU 21 .
- the RAM 26 is a memory device such as SRAM (Static Random Access Memory) that is used as a work area for the CPU 21 and a temporary storage space for history data.
- SRAM Static Random Access Memory
- the RAM 26 can be used as a work memory or the like when the CPU 21 executes processing.
- the program is installed in the information processing device 20 via various storage media (internal memory), for example. Alternatively, program installation may be performed via the Internet or the like.
- the information processing device 20 of the present embodiment is a web server for evaluating the quality of the fertilized egg F by cloud computing, but is not limited to this, and any other computer such as a PC may be used. .
- the information processing device 20 further has an acquisition unit 22 , an output unit 22 , an I/O interface 24 and a bus 210 .
- the acquisition unit 22 acquires one or more observation images in which cells or cell populations linked to unique identification information are captured from a plurality of gateway terminals 10a (terminal devices 10) via the network N.
- the output unit 23 outputs information generated according to the present technology to a computer via the network N, for example.
- the information processing device 20 may further have a non-volatile memory such as a HDD (Hard Disc Drive) and a flash memory (SSD: Solid State Drive).
- a non-volatile memory such as a HDD (Hard Disc Drive) and a flash memory (SSD: Solid State Drive).
- the I/O interface 24 is communicably connected to the terminal device 10 and the first and second terminals 30 and 40 via the network N, and has an acquisition section 22 and an output section 23 .
- the I/O interface 24 functions as an input/output interface between the terminal device 10 and the first and second terminals 30 and 40 .
- the bus 210 is a signal transmission path for inputting/outputting various signals between each part of the information processing device 20 .
- the CPU 21 , ROM 25 , RAM 26 and I/O interface 29 are connected to each other through a bus 210 .
- the configuration and functions of the information processing device 20 are not limited to those described above.
- the first terminal 30 includes a receiving unit that receives information output from the output unit 23 or the second terminal 40 via the network N, an input unit that receives input from the user of the cell processing system of the present technology, and the and a transmission unit for transmitting information input through the input unit and information received by the reception unit.
- the first terminal 30 is typically a computer such as a laptop PC or desktop PC, but is not limited to this, and may be a smart device, tablet terminal, or the like.
- the second terminal 40 includes a receiving unit that receives information output from the output unit 23 or the first terminal 30 via the network N, an input unit that receives input from the user of the cell processing system of the present technology, and the and a transmission unit for transmitting information input through the input unit and information received by the reception unit.
- the second terminal 40 is typically a smart device, tablet terminal, or the like, but is not limited to this, and may be any other computer such as a laptop PC or desktop PC.
- the first terminal 30 or the second terminal 40 may control the observation device 202 to perform cell processing according to the present technology.
- PBMC Peripheral blood mononuclear cell fraction
- Plasma Donor-derived plasma
- Medium TCell Expansion Medium
- Antibodies Human CD3/CD28 T Cell Activator and Purified anti-human CD3 Antibody (clone: OKT3)
- Cytokines Human Recombinant IL-2, Human Recombinant IL-7, and Human Recombinant IL-15
- PBS(-) DPBS, no calcium, no magnesium
- PBMCs were placed in each well of the plate at approximately 5 ⁇ 10 5 cells/well or more.
- Antibodies and cytokines were added to each well at different concentrations.
- Antibodies and cytokines added at day 0 and their amounts added are shown in FIG. Each rectangle shown in the figure corresponds to each well. Thus, a total of 32 stimulation patterns were used.
- the wells in the first column and first row of the figure show medium supplemented with 25 ⁇ L/2 mL of IC3/28 and 410 IU/mL of IL2.
- Antibodies and cytokines indicated by abbreviations in the figure are as follows.
- IC3/28 ImmunoCult Human CD3/CD28 T Cell Activator IL2: Human Recombinant IL-2
- IL7 Human Recombinant IL-7
- IL15 Human Recombinant IL-15
- OKT3 Purified anti-human CD3 antibody (clone: OKT3)
- the culture in each well was expanded every 3 or 4 days and cultured for a total of 14 days.
- the expansion culture specifically, the culture in each well was divided into two, and the same amount of medium as the amount after division was added to the divided culture solution.
- cytokines were added to maintain initial concentrations. No antibody was added after the split. That is, the antibody concentration was diluted two-fold for each expansion culture.
- the medium is replaced after 3-4 days, the amount of antibody becomes 0.
- cell extraction was performed and the extracted cells were measured by flow cytometry. The measurement was performed using a commercially available flow cytometer.
- FIG. 18 shows the staining antibodies used in the measurement.
- Fig. 19 shows an overview of the experiment and measurement/analysis.
- the graph in the figure shows the results of measurement by the flow cytometer for one of the well groups (OKT3-0.25 ⁇ g/mL, IL2-410IU/mL).
- the left Y-axis of the graph indicates the percentage of cells (%), and the right Y-axis indicates the number of cells.
- the X-axis shows days.
- the graph shows changes in the ratio (or number) of each of the seven types of cells in the total cells to be measured in the culture medium.
- Plots in the graph are measurement results by the flow cytometer.
- the graph for example, there are plots on day 0 (starting day of culture), day 4, day 7, day 11, and day 14, i.e., expanded culture on these days, and during the expanded culture , samples were obtained for measurement by the flow cytometer.
- the percentage of the CD4-positive cell population does not change throughout the culture period (CD4 + in the same figure), but the percentage of the CD8-positive cell population changes from day 0 to day 4 after the start of culture. (CD8+ in the figure).
- CD8+ in the proportion (or number) of cell types identified by the expression status of a given marker was recorded over the culture period.
- the stimulus added to the culture solution is shown at the bottom of the figure.
- antibody stimulation continues until the first expansion culture is performed, ie up to four days.
- stimulation with cytokines and stimulation with medium continued over the 14-day culture period.
- FIG. 20 shows the measurement data for part of the well group.
- CD4+ cells and CD8+ cells As shown in the figure, depending on the culture conditions, there are cell groups that proliferate easily and cell groups that do not proliferate easily. In addition, under the above culture conditions, there was a large difference in proliferation of CD4+ cells and CD8+ cells. For example, as shown in the upper right of the figure, CD4+ cells and CD8+ cells showed similar growth in medium supplemented with IC3/28 and IL7 and IL15. On the other hand, as shown in the lower right of the figure, in the medium supplemented with OKT3 and IL7 and IL15, CD8+ cells proliferated significantly, while CD4+ cells proliferated to a lesser extent.
- FIG. 21A shows data on culture conditions.
- the data shown in the figure include cytokine stimulation data and antibody stimulation data.
- five rows belonging to "IC3/28_12.5 IL7_50 IL15_50” correspond to one of the wells described above. Each of the five rows below also corresponds to one well.
- the "days” column indicates the number of days of culture, and 3, 7, 10, and 14 are the days on which the expansion culture and measurement by the flow cytometer were performed.
- the "OKT3" and “IC3/28” columns indicate the antibody concentration in the medium, and the "IL2", “IL7” and “IL15” columns indicate the cytokine concentration in the medium.
- the antibody concentration cumulative value is a value obtained by multiplying the "antibody concentration in medium” by "the number of days cultured in a medium having the antibody concentration”.
- the cytokine concentration cumulative value is a value obtained by multiplying "the cytokine concentration in the medium” by "the number of days cultured in the medium having the cytokine concentration”.
- data sets used in the present technology may include antibody stimulation data.
- the antibody stimulation data is particularly data based on the antibody concentration, and preferably is the cumulative value of the antibody concentration and the number of culture days in the culture (that is, "antibody concentration” x "culture days”).
- Data sets used in the present technology may also include cytokine stimulation data.
- Cytokine stimulation data is particularly data based on cytokine concentration, preferably the cumulative value of cytokine concentration and culture days in culture (that is, “cytokine concentration” ⁇ “culture days”). In addition, by using the cumulative value in this way, it is possible to generate a trained model that takes time into consideration, and to predict the future state of the culture based on the state of the culture at a certain point in time. .
- the data can be used to predict how many days of culture are necessary when stimulation at a constant concentration is continued from the cumulative value. Can be used to generate trained models. Also, instead of the culture days, other time units such as hours and minutes may be used.
- Such culture condition data may be handled as processing conditions in this technology.
- such culture condition data may be used as an explanatory variable or objective variable (especially an explanatory variable) for generating a trained model.
- the culture condition data may be included in a data set for causing the first learner and/or the second learner according to the present technology to perform machine learning. can be treated as
- FIG. 21B shows data for cultured cells.
- the data shown in the figure includes data on cell composition.
- five rows belonging to "IC3/28_12.5 IL7_50 IL15_50” correspond to one of the wells described above. Each of the five rows below also corresponds to one well.
- the five rows belonging to "IC3/28_12.5 IL7_50 IL15_50” correspond to the five rows belonging to "IC3/28_12.5 IL7_50 IL15_50” described above with respect to Figure 21A.
- the "days” column indicates the number of days of culture, and 3, 7, 10, and 14 are the days on which the expansion culture and measurement by the flow cytometer were performed.
- the "L + CD8 + CD4-” column, the “L + CD8-CD4 +” column, and the “L + CD62L +” column show the percentage of cell types in the cultured cell group, each CD8 positive Percentage of cells (CD4-negative), percentage of CD4-positive cells (CD8-negative), and percentage of CD62L-positive cells are shown.
- the "CD4/CD8” column shows the ratio of the ratio of CD4-positive cells to the ratio of CD8-positive cells.
- the "L + 8 + _ratio” column, the “L + 4 + _ratio” column, and the “L + 62L + _ratio” column are the rate of change in the percentage of CD8-positive cells and the rate of change in the percentage of CD4-positive cells. rate, and percent change in the percentage of CD62L-positive cells.
- the rate of change is the ratio of the ratio after a predetermined number of days has elapsed to the ratio at 0 days of culture (that is, "composition rate after predetermined number of days"/"composition rate at day 0").
- the "CD4/CD8_ratio” column shows the rate of change in the ratio of CD4-positive cells to CD8-positive cells.
- the rate of change is the ratio of the CD4/CD8 ratio after a predetermined number of days to the CD4/CD8 ratio on day 0 of culture (i.e., "the CD4/CD8 ratio after a predetermined number of days"/"the CD4/CD8 ratio on day 0 CD8 ratio”).
- Such cell-related data may be treated as cell-related information in the present technology, and in particular may be treated as cell-related information before or after treatment.
- Data on the cell may be used as explanatory variables or objective functions (especially objective variables) for generating a trained model.
- data about the cultured cells may be included in a dataset for subjecting the first learner and/or the second learner according to the present technology to machine learning. Alternatively, it may be treated as an objective variable.
- the coefficient of determination of the generated trained model was 0.4963 (Fig. 22A). From these results, it can be seen that the composition ratio of cell types after culture can be predicted based on data on culture conditions. Also, it can be seen that the prediction accuracy of the generated trained model is relatively high.
- the software generated contribution degree data indicating the contribution degree of each explanatory variable to the prediction accuracy (that is, the degree of contribution to the prediction accuracy).
- contribution data bar graph data showing the contribution of each explanatory variable with a bar was generated as shown in FIG. 22B. From the contribution data, for example, it can be seen that the contribution of OKT3 is large.
- a data set was prepared in which the explanatory variables were the cumulative values of the concentrations of IC3/28, OKT3, IL2, IL7, and IL15, and the rate of change in the percentage of CD4+ cells, and the objective variable was the rate of change in the percentage of CD8+ cells.
- the coefficient of determination of the generated trained model was 0.8631 (Fig. 23A). From this result, it can be seen that the prediction accuracy can be further improved by adopting the measured values regarding the cultured cells as explanatory variables. As described above, it was shown that the ratio of specific cells after culture can be predicted using culture conditions and/or measured values.
- Contribution data was also generated for the case shown in FIG. 23A.
- contribution data bar graph data showing the contribution of each explanatory variable with a bar was generated as shown in FIG. 23B.
- the actual culture result is obtained, and data on the obtained culture result is stored in the certain data set (for example, by generating a trained model again using a data set to which culture conditions and the cell composition of the culture obtained under the culture conditions have been added, it is thought that a trained model with higher prediction accuracy can be generated. . That is, in the cell processing system according to the present technology, it is possible to generate a trained model with higher prediction accuracy by updating the database.
- a cell processing system may be configured to generate prediction accuracy data of the trained model generated as described above.
- the prediction accuracy data may include data indicative of the prediction accuracy of the trained model, such as the coefficient of determination discussed above.
- the prediction accuracy data can be output (eg, displayed) by an output device (eg, display device, etc.) connected to the information processing section, for example. This allows the user to grasp the prediction accuracy of the generated trained model.
- the prediction accuracy data may include contribution degree data of each explanatory variable, as described above.
- the contribution data allows the user to grasp the processing conditions that are important for the final culture result among the processing conditions (for example, stimulating factors) adopted as explanatory variables.
- a cell culture unit capable of culturing a group of cells; a measurement unit capable of measuring the cell group; an estimator, and The estimating unit is based on at least one of information on the cells of the cell group before treatment, information on predetermined cells to be reached after the treatment of the cell group, and predetermined processing conditions for the cell group before treatment. estimating processing conditions that can derive the cell group to the information on the predetermined cells, or information on the cells after processing of the cell group derived by the predetermined processing conditions; Cell processing system.
- the estimation unit sets the information about the predetermined cells and/or the predetermined processing conditions based on information regarding approval of the commercialized cells.
- the image acquired by the image acquiring unit is a stained image and/or a non-stained image.
- the staining image includes a fluorescence image.
- the unstained image includes at least one of a bright field image, a phase contrast image, a polarized image, and an image that is pseudo-stained for each cell feature identified from information learned from the unstained image and the fluorescent image. , [5] or the cell processing system according to [6].
- the cell processing system further comprising a control unit that controls the sorting and culturing of the cells based on the predetermined processing conditions or the processing conditions estimated by the estimation unit.
- the control unit sets a threshold for the estimated processing conditions or information about the treated cells, and discontinues production of the cells according to the threshold or according to information specified by a user, and/or
- the cell processing system according to any one of [1] to [16], further comprising: [18]
- the estimating unit estimates information about the treatment of the treated cells of the cell group derived from the treatment conditions based on the first learner and the information about the cells before treatment, [17] The cell processing system described in .
- the information on the cells before treatment includes at least one of information on the composition, state, number, ratio, type, growth rate, survival rate, genetic information, and molecules of the cells before treatment; ] The cell processing system according to any one of .
- the information about the treated cells includes at least one of the composition, state, number, ratio, increase rate, survival rate, response rate, recurrence rate, and side effects of the treated cells; ] The cell processing system according to any one of .
- the cell treatment system according to any one of [1] to [23], wherein the treatment conditions include culture conditions related to at least one of stimulating factors and culture days.
- the cell processing system according to any one of [1] to [24], wherein the cell group is composed of a peripheral blood mononuclear cell fraction collected from a patient or a donor.
- information about the cells prior to treatment of the cell population Based on at least one of information about predetermined cells to be reached after treatment of the cell group and predetermined treatment conditions for the cell group before treatment, an estimating unit for estimating processing conditions capable of deriving the cell group from the information regarding the predetermined cells, or information regarding the processed cells of the cell group derived under the predetermined processing conditions; Device.
- a method of creating learning data wherein cells processed under processing conditions estimated by an information processing device and information related to a therapy using the cells are used as input information, and a relationship between the cells and the information related to the therapy is learned.
- Information about cells before treatment, treatment conditions estimated by an information processing device, and the cells before treatment that have been treated under the treatment conditions are used as input information, and the relationship between the information about the cells before treatment and the treatment conditions. Learning data creation method for learning.
- a cell processing method comprising an estimating step of estimating processing conditions under which the cell group can be derived into the predetermined cell information, or information regarding the treated cells of the cell group derived under the predetermined processing conditions.
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Abstract
Description
すなわち、本技術は、
細胞群を培養可能な細胞培養部と、
前記細胞群を測定可能な測定部と、
推定部と、を具備しており、
前記推定部は、前記細胞群の処理前の細胞に関する情報と、前記細胞群の処理後に達すべき所定の細胞に関する情報および処理前の前記細胞群に対する所定の処理条件のうち少なくとも一方と、に基づいて、前記所定の細胞に関する情報に前記細胞群を導出可能な処理条件、または、前記所定の処理条件により導出される前記細胞群の処理後の細胞に関する情報を推定する、細胞処理システムを提供する。
前記推定部は、製品化された前記細胞の承認に関する情報に基づいて、前記所定の細胞に関する情報及び/又は前記所定の処理条件を設定しうる。
前記測定部は、前記処理前の細胞に関する情報と前記処理後の細胞に関する情報と細胞群の処理中の細胞に関する情報のうち少なくとも1つを取得するように構成されていてよい。
前記測定部は、画像取得部、シグナル検出部のうち少なくとも1つを含んでよい。
前記画像取得部により取得される画像は、染色画像および/又は非染色画像であってよい。
前記染色画像は、蛍光画像を含んでよい。
前記非染色画像は、明視野画像、位相差画像、偏光画像、非染色画像と蛍光画像より学習された情報から識別され細胞の特徴ごとに疑似染色された画像のうち少なくとも1つを含んでよい。
前記画像取得部は、CMOS、信号処理センサ、イベント検出センサのうち少なくとも1つより画像取得しうる。
前記所定の処理条件、または前記推定部により推定された処理条件に基づいて前記細胞を選別処理するよう制御する制御部を更に具備しうる。
前記所定の処理条件、または前記推定部により推定された処理条件に基づいて前記細胞を培養処理するよう制御する制御部を更に具備しうる。
前記所定の処理条件、または前記推定部により推定された処理条件に基づいて前記細胞を選別及び培養処理するよう制御する制御部を更に具備しうる。
前記制御部は、推定された前記処理条件又は前記処理後の細胞に関する情報に閾値を設定し、前記閾値に応じて、又はユーザに指定された情報に応じて前記細胞の製造中止、及び/又は再採取するよう処理しうる。
前記制御部は、光選択的なリンカーを介して培養容器に固定された前記細胞に対して、光学制御により細胞を分取するよう処理しうる。
前記培養制御は、物理化学的環境、生理学的環境うち、少なくとも1つを制御しうる。
前記物理化学的環境の制御は、湿度、pH、浸透圧、酸素分圧、二酸化炭素分圧のうち少なくとも1つによる制御を含みうる。
前記生理学的環境の制御は、培養液、刺激因子、転写因子、細胞密度のうち少なくとも1つによる制御を含みうる。
前記細胞処理システムは、前記推定部により推定された前記処理条件により処理された前記細胞と、前記細胞を用いた治療に関する情報を入力情報として、前記細胞と前記治療に関する情報の関連性を学習する第一学習器と、を更に具備してよい。
前記推定部は、前記第一学習器と、前記処理前の細胞に関する情報と、に基づいて前記処理条件により導出される前記細胞群の処理後の細胞の治療に関する情報を推定してよい。
前記細胞処理システムは、前記処理前の細胞に関する情報と、前記推定部により推定された前記処理条件と、前記処理条件により処理された前記処理前の細胞を入力情報として、前記処理前の細胞に関する情報と前記処理条件の関連性を学習する第二学習器と、を更に具備してよい。
前記推定部は、前記第二学習器と、前記処理前の細胞に関する情報と、に基づいて、前記所定の細胞に関する情報に前記細胞群を導出可能な処理条件を推定してよい。
前記処理前の細胞に関する情報は処理前の細胞の構成、状態、個数、割合、種類、増加率、生存率、遺伝情報、分子に関する情報のうち少なくとも1つを含みうる。
前記分子に関する情報は、転写因子や転写制御因子等の遺伝子発現制御因子、分子マーカの情報、細胞表面抗原の情報のうち少なくとも1つを含みうる。
前記処理後の細胞に関する情報は、処理後の細胞の構成、状態、個数、割合、増加率、生存率、奏効率、再発率、副作用のうち少なくとも1つを含みうる。
前記処理条件は、刺激因子、培養日数のうち少なくとも1つに関する培養条件を含みうる。
前記細胞群は、患者またはドナーから採取された末梢血単核球分画で構成されてよい。
また、本技術は、細胞群の処理前の細胞に関する情報と、
前記細胞群の処理後に達すべき所定の細胞に関する情報および処理前の前記細胞群に対する所定の処理条件のうち少なくとも一方と、に基づいて、
前記所定の細胞に関する情報に前記細胞群を導出可能な処理条件、または、前記所定の処理条件により導出される前記細胞群の処理後の細胞に関する情報を推定する推定部、を具備する、情報処理装置も提供する。
また、本技術は、情報処理装置により推定された処理条件により処理された細胞と、前記細胞を用いた治療に関する情報を入力情報として、前記細胞と前記治療に関する情報の関連性を学習する、学習データ作成方法も提供する。
また、本技術は、処理前の細胞に関する情報と、情報処理装置により推定された処理条件と、前記処理条件により処理された前記処理前の細胞を入力情報として、前記処理前の細胞に関する情報と前記処理条件の関連性を学習する学習データ作成方法も提供する。
また、本技術は、サンプルに含まれる細胞群の処理前の細胞に関する情報と、
予め設定された前記細胞群の処理後に達すべき所定の細胞に関する情報および処理前の前記細胞群に対する所定の処理条件のうち少なくとも一方と、に基づいて、
前記所定の細胞に関する情報に前記細胞群を導出可能な処理条件、または、前記所定の処理条件により導出される前記細胞群の処理後の細胞に関する情報を推定する推定工程を含む、細胞処理方法も提供する。
1.第1の実施形態(細胞処理システム)
(1)発明の課題の詳細
(2)第1の実施形態の説明
(3)第1の実施形態の例
(3-1)細胞培養部
(3-2)情報処理部
(3-3)測定部
2.第2の実施形態(細胞処理方法)
(1-1)サンプル調製工程
(1-2)処理前の細胞に関する情報取得工程
(1-3)推定工程
(1-4)処理工程
(1-5)処理後の細胞に関する情報取得工程
(1-6)学習工程
3.細胞処理システムの構成例
4.実施例
本技術の他の実施態様において、前記推定部は、前記所定の処理条件により導出される前記細胞群の処理後の細胞に関する情報を推定しうる。当該推定は、特には、サンプルに含まれる細胞群の処理前の細胞に関する情報と、処理前の前記細胞群に対する所定の処理条件と、に基づき実行されてよい。
細胞処理システム1000の構成例が図2に示されている。図2に示されるとおり、細胞培養部1は、同図に示されるように、例えば試料保持部100及び制御部200を備えていてよい。情報処理部2は、同図に示されるように、例えば推定部300及び学習部400を備えていてよい。情報処理部2はさらにデータベース500を備えていてよい。測定部3は、同図に示されるように、例えば画像取得部600を備えていてよい。
以下でこれらについて説明する。
前記光学制御部は光学制御により前記分解性リンカーに対応する特定波長の光を照射することで刺激を付与してもよい。前記光学制御部は、例えば光源と、当該光源から出射された光を所定の位置(容器101中の所定の位置)に到達させるためのMEMS(Micro Electro Mechanical Systems)素子と、を含んでよい。当該MEMS素子は、例えばDMD又は走査ミラーであってよい。前記光学制御部は、さらに、当該光の形状及び/又は波長を制御するための光学素子(例えばレンズ、フィルター、ミラー及びプリズムなど)を含んでもよい。
前記環境制御部は、物理化学的または生理学的制御により当該試料保持部100に含まれる細胞周囲の物理化学的または生理学的環境を保持又は提供してもよい。
当該物理化学的環境の制御を行うために、前記環境制御部は、物理化学的環境供給部114を制御し、これにより、容器101内の湿度、pH、浸透圧、酸素分圧、又は二酸化炭素分圧等を制御することができる。これにより、培養環境下における対象細胞に最適な物理的環境が提供され細胞の生存率を高めることができる。
当該生理学的環境の制御を行うために、前記環境制御部は、活性化剤供給部108、遺伝子供給部109、培養液供給部110のうち少なくとも1つを制御しうる。これにより、培養環境下における対象細胞に最適な生理学的環境が提供され細胞の培養効率を向上させることができる。前記生理学的環境の制御は、培養液、刺激因子、転写因子、細胞密度のうち少なくとも1つによる制御を含みうる。
生体由来試料Sは、生体成分を含む試料であってよい。前記生体成分は、生体の組織、細胞、生体の液状成分(血液や尿等)、培養物、又は生細胞(心筋細胞、神経細胞、及び受精卵など)であってよい。
前記生体由来試料は、固形物であってよく、パラフィンなどの固定試薬によって固定された標本又は凍結により形成された固形物であってよい。前記生体由来試料は、当該固形物の切片でありうる。前記生体由来試料の具体的な例として、生検試料の切片を挙げることができる。
光照射部5101は、生体由来試料Sを照明するための光源、および光源から照射された光を標本に導く光学部である。光源は、可視光、紫外光、若しくは赤外光、又はこれらの組合せを生体由来試料に照射しうる。光源は、ハロゲンランプ、レーザ光源、LEDランプ、水銀ランプ、及びキセノンランプのうちの1又は2以上であってよい。蛍光観察における光源の種類及び/又は波長は、複数でもよく、当業者により適宜選択されてよい。光照射部は、透過型、反射型又は落射型(同軸落射型若しくは側射型)の構成を有しうる。
光学部5102は、生体由来試料Sからの光を信号取得部5103へと導くように構成される。光学部は、顕微鏡装置5100が生体由来試料Sを観察又は撮像することを可能とするように構成されうる。
光学部5102は、対物レンズを含みうる。対物レンズの種類は、観察方式に応じて当業者により適宜選択されてよい。また、光学部は、対物レンズによって拡大された像を信号取得部に中継するためのリレーレンズを含んでもよい。光学部は、前記対物レンズ及び前記リレーレンズ以外の光学部品、接眼レンズ、位相板、及びコンデンサレンズなど、をさらに含みうる。
また、光学部5102は、生体由来試料Sからの光のうちから所定の波長を有する光を分離するように構成された波長分離部をさらに含んでよい。波長分離部は、所定の波長又は波長範囲の光を選択的に信号取得部に到達させるように構成されうる。波長分離部は、例えば、光を選択的に透過させるフィルタ、偏光板、プリズム(ウォラストンプリズム)、及び回折格子のうちの1又は2以上を含んでよい。波長分離部に含まれる光学部品は、例えば対物レンズから信号取得部までの光路上に配置されてよい。波長分離部は、蛍光観察が行われる場合、特に励起光照射部を含む場合に、顕微鏡装置内に備えられる。波長分離部は、蛍光同士を互いに分離し又は白色光と蛍光とを分離するように構成されうる。
信号取得部5103は、生体由来試料Sからの光を受光し、当該光を電気信号、特にはデジタル電気信号へと変換することができるように構成されうる。信号取得部は、当該電気信号に基づき、生体由来試料Sに関するデータを取得することができるように構成されてよい。信号取得部は、生体由来試料Sの像(画像、特には静止画像、タイムラプス画像、又は動画像)のデータを取得することができるように構成されてよく、特に光学部によって拡大された画像のデータを取得するように構成されうる。信号取得部は、1次元又は2次元に並んで配列された複数の画素を備えている1つ又は複数の撮像素子、CMOS又はCCDなど、を含む。信号取得部は、低解像度画像取得用の撮像素子と高解像度画像取得用の撮像素子とを含んでよく、又は、AFなどのためのセンシング用撮像素子と観察などのための画像出力用撮像素子とを含んでもよい。撮像素子は、前記複数の画素に加え、各画素からの画素信号を用いた信号処理を行う信号処理部(CPU、DSP、及びメモリのうちの1つ、2つ、又は3つを含む)、及び、画素信号から生成された画像データ及び信号処理部により生成された処理データの出力の制御を行う出力制御部を含む信号処理センサであってもよい。更には、撮像素子は、入射光を光電変換する画素の輝度変化が所定の閾値を超えたことをイベントとして検出する非同期型のイベント検出センサを含み得る。前記複数の画素、前記信号処理部、及び前記出力制御部を含む撮像素子は、好ましくは1チップの半導体装置として構成されうる。
制御部5110は、顕微鏡装置5100による撮像を制御する。制御部は、撮像制御のために、光学部5102及び/又は試料載置部5104の移動を駆動して、光学部と試料載置部との間の位置関係を調節しうる。制御部5110は、光学部及び/又は試料載置部を、互いに近づく又は離れる方向(例えば対物レンズの光軸方向)に移動させうる。また、制御部は、光学部及び/又は試料載置部を、前記光軸方向と垂直な面におけるいずれかの方向に移動させてもよい。制御部は、撮像制御のために、光照射部5101及び/又は信号取得部5103を制御してもよい。
試料載置部5104は、生体由来試料の試料載置部上における位置が固定できるように構成されてよく、いわゆるステージであってよい。試料載置部5104は、生体由来試料の位置を、対物レンズの光軸方向及び/又は当該光軸方向と垂直な方向に移動させることができるように構成されうる。
情報処理部5120は、顕微鏡装置5100が取得したデータ(撮像データなど)を、顕微鏡装置5100から取得しうる。情報処理部は、撮像データに対する画像処理を実行しうる。当該画像処理は、色分離処理を含んでよい。当該色分離処理は、撮像データから所定の波長又は波長範囲の光成分のデータを抽出して画像データを生成する処理、又は、撮像データから所定の波長又は波長範囲の光成分のデータを除去する処理などを含みうる。また、当該画像処理は、組織切片の自家蛍光成分と色素成分を分離する自家蛍光分離処理や互いに蛍光波長が異なる色素間の波長を分離する蛍光分離処理を含みうる。前記自家蛍光分離処理では、同一ないし性質が類似する前記複数の標本のうち、一方から抽出された自家蛍光シグナルを用いて他方の標本の画像情報から自家蛍光成分を除去する処理を行ってもよい。
情報処理部5120は、制御部5110に撮像制御のためのデータを送信してよく、当該データを受信した制御部5110が、当該データに従い顕微鏡装置5100による撮像を制御してもよい。
生体由来試料Sは、生体粒子を含む液状試料であってよい。当該生体粒子は、例えば細胞又は非細胞性生体粒子である。前記細胞は、生細胞であってよく、より具体的な例として、赤血球や白血球などの血液細胞、及び精子や受精卵等生殖細胞を挙げることができる。また前記細胞は全血等検体から直接採取されたものでもよいし、培養後に取得された培養細胞であってもよい。前記非細胞性生体粒子として、細胞外小胞、特にはエクソソーム及びマイクロベシクルなどを挙げることができる。前記生体粒子は、1つ又は複数の標識物質(例えば色素(特には蛍光色素)及び蛍光色素標識抗体など)によって標識されていてもよい。なお、本開示の生体試料分析装置により、生体粒子以外の粒子が分析されてもよく、キャリブレーションなどのために、ビーズなどが分析されてもよい。
流路Cは、生体試料が流れるように、特に前記生体試料に含まれる生体粒子が略一列に並んだ流れが形成されるように構成されうる。流路Cを含む流路構造は、層流が形成されるように設計されてよく、特には生体試料の流れ(サンプル流)がシース液の流れによって包まれた層流が形成されるように設計される。当該流路構造の設計は、当業者により適宜選択されてよく、既知のものが採用されてもよい。流路Cは、マイクロチップ(マイクロメートルオーダーの流路を有するチップ)又はフローセルなどの流路構造体(flow channel structure)中に形成されてよい。流路Cの幅は、1mm以下であり、特には10μm以上1mm以下であってよい。流路C及びそれを含む流路構造体は、プラスチックやガラスなどの材料から形成されてよい。
光照射部6101は、光を出射する光源部と、当該光を流路Cへと導く導光光学系とを含む。前記光源部は、1又は複数の光源を含む。光源の種類は、例えばレーザ光源又はLEDでありうる。各光源から出射される光の波長は、紫外光、可視光、又は赤外光のいずれかの波長であってよい。導光光学系は、例えばビームスプリッター群、ミラー群又は光ファイバなどの光学部品を含む。また、導光光学系は、光を集光するためのレンズ群を含んでよく、例えば対物レンズを含みうる。生体試料に対する光の照射点は、1つ又は複数であってよい。光照射部5101は、一の照射点に対して、一つ又は異なる複数の光源から照射された光を集光するよう構成されていてもよい。
検出部6102は、光照射部による粒子への光照射により生じた光を検出する少なくとも一つの光検出器を備えている。検出する光は、例えば蛍光又は散乱光(例えば前方散乱光、後方散乱光、及び側方散乱光のいずれか1つ以上)である。各光検出器は、1以上の受光素子を含み、例えば受光素子アレイを有する。各光検出器は、受光素子として、1又は複数のPMT(光電子増倍管)及び/又はAPD及びMPPC等のフォトダイオードを含んでよい。当該光検出器は、例えば複数のPMTを一次元方向に配列したPMTアレイを含む。また、検出部は、CCD又はCMOSなどの撮像素子を含んでもよい。検出部は、当該撮像素子により、生体粒子の画像(例えば明視野画像、暗視野画像、及び蛍光画像など)を取得しうる。
情報処理部6103は、例えば各種データ(例えば光データ)の処理を実行する処理部及び各種データを記憶する記憶部を含む。処理部は、蛍光色素に対応する光データを検出部より取得した場合、光強度データに対し蛍光漏れ込み補正(コンペンセーション処理)を行いうる。また、処理部は、スペクトル型フローサイトメータの場合、光データに対して蛍光分離処理を実行し、蛍光色素に対応する光強度データを取得する。 前記蛍光分離処理は、例えば特開2011-232259号公報に記載されたアンミキシング方法に従い行われてよい。検出部が撮像素子を含む場合、処理部は、撮像素子により取得された画像に基づき、生体粒子の形態情報を取得してもよい。記憶部は、取得された光データを格納できるように構成されていてよい。記憶部は、さらに、前記アンミキシング処理において用いられるスペクトラルリファレンスデータを格納できるように構成されていてよい。
分取部6104は、例えば情報処理部による判定結果に応じて、生体粒子の分取を実行しうる。分取の方式は、振動により生体粒子を含む液滴を生成し、分取対象の液滴に対して電荷をかけ、当該液滴の進行方向を電極により制御する方式であってよい。分取の方式は、流路構造体内にて生体粒子の進行方向を制御し分取を行う方式であってもよい。当該流路構造体には、例えば、圧力(噴射若しくは吸引)又は電荷による制御機構が設けられる。当該流路構造体の例として、流路Cがその下流で回収流路及び廃液流路へと分岐している流路構造を有し、特定の生体粒子が当該回収流路へ回収されるチップ(例えば2020-76736に記載されたチップ)を挙げることができる。
本明細書内において、推定工程は、対象細胞に関する情報などに基づき、前記導出可能な処理条件又は前記処理後の細胞に関する情報を生成する処理を実行する工程を意味し、すなわち機械学習分野における推論処理を包含するものである。すなわち、本明細書内において、推定工程は「推論工程」と称されてもよい。また、本明細書内において、推定条件は「推論条件」と称されてもよい。
このように、前記環境制御部は、活性化剤供給部108が、細胞群内の1以上の所定細胞の割合を増加又は減少させるように活性化剤を培養容器内に供給するように制御しうる。また、前記環境制御部は、活性化剤供給部108が、細胞群内の1以上の所定細胞の生存率を増加又は減少させるように活性化剤を培養容器内に供給するように制御しうる。更には、前記環境制御部は、活性化剤供給部108が、細胞群内の1以上の所定細胞の遺伝子導入効率を増加又は減少させるように活性化剤を培養容器内に供給するように制御しうる。
このように、前記環境制御部は、活性化剤供給部108が、細胞群内の1以上の所定細胞の割合を維持するように活性化剤を培養容器内に供給するように制御しうる。
なお、当該測定工程において、測定部3より取得した細胞塊の大きさや数に関する情報から細胞の増殖状態を解析することが可能である。例えば、T細胞の場合、細胞増殖時に細胞塊を作成することがある。当該細胞塊の面積を測定することによって、当該細胞の数を推定し、さらには当該塊の数を測定することで、容器内の全細胞数を推定することが可能となる。時系列で当該塊に関する測定値を取得することで、当該細胞の増殖状態を確認され得る。
前記推定部は、生成された第一学習器及び/又は第二学習器を用いて、上記で述べた推定処理を実行してもよい。
当該機械学習において、前記処理前の細胞に関する情報及び前記処理条件が説明変数として取り扱われてよく、且つ、前記処理後の細胞に関する情報が目的変数として取り扱われてよい。このような説明変数及び目的変数の取扱いは、例えば、前記推定部が前記細胞群の処理後の細胞に関する情報を推定する実施態様において適用されてよい。
代替的には、当該機械学習において、前記処理前の細胞に関する情報及び前記処理後の細胞に関する情報が説明変数として取り扱われてよく、且つ、前記処理条件が目的変数として取り扱われてよい。このような説明変数及び目的変数の取扱は、例えば、前記推定部が前記所定の細胞に関する情報を前記細胞群から導出可能とするための処理条件を推定する実施態様において適用されてよい。
端末装置10は、図14に示すように、複数のゲートウェイ端末10aから構成され、これらのゲートウェイ端末10aがそれぞれ制御記録PC用205(図15参照)を介して観察装置202と無線又は有線により接続される。観察装置202は、細胞処理システムのユーザにより扱われる。
観察装置202は、上記1.及び2.で説明した細胞培養部1及び測定部3を備えている。細胞培養部1及び測定部3は、例えば一体的に構成されてよい。
測定部3は、前記インキュベータ内の細胞を観察できるように構成されていてよく、例えば顕微鏡システムとして構成されてよい。この場合、測定部3は、前記画像取得部を含んでよい。また、測定部3は、例えば生体試料分析装置として構成されてよい。この場合、測定部は、前記シグナル検出部を含みうる。
細胞培養部1及び測定部3に含まれる上記構成要素は、制御記録用コンピュータ(PC)205と接続されている。制御記録用PC205は、表示装置206及び入力部207とも接続されている。
図16は、本実施形態に係る情報処理装置20のブロック図の一例である。情報処理装置20は、同図に示されるように、CPU(Central Processing Unit)21を含みうる。CPU21によって、上記で説明した情報処理(例えば前記推定工程及び/又は前記学習工程など)が実行されうる。CPUD21は、上記1.及び2.において説明した推定部300、学習部400、及びデータベース500の機能を実行するように構成される。
また、情報処理装置は、データベース500も含みうる。情報処理装置20はさらに、ROM(Read Only Memory)25及びRAM(Random Access Memory)26等のコンピュータに必要なハードウェアを有する。データベース500は、例えばROM25又はRAM26に存在してよい。
第1端末30は、ネットワークNを介して、出力部23又は第2端末40から出力された情報を受信する受信部と、本技術の細胞処理システムのユーザからの入力を受け付ける入力部と、当該入力部を介して入力された情報や、当該受信部が受信した情報を送信する送信部と、を有する。
第2端末40は、ネットワークNを介して、出力部23又は第1端末30から出力された情報を受信する受信部と、本技術の細胞処理システムのユーザからの入力を受け付ける入力部と、当該入力部を介して入力された情報や、当該受信部が受信した情報を送信する送信部と、を有する。
12/24ウェルプレートを用いて、細胞含有サンプルの培養を実施した。当該サンプルとして、健常者由来末梢血単核球分画または患者由来末梢血単核球分画が用いられた。当該培養において用いられた材料及び試薬は以下のとおりである。
血漿:ドナー由来血漿
培地: TCell Expansion Medium
抗体: Human CD3/CD28 T Cell Activator及びPurified anti-human CD3 Antibody(clone:OKT3)
サイトカイン:Human Recombinant IL-2、Human Recombinant IL-7、及びHuman Recombinant IL-15
PBS(-):DPBS, no calcium, no magnesium
IC3/28:ImmunoCult Human CD3/CD28 T Cell Activator
IL2:Human Recombinant IL-2
IL7:Human Recombinant IL-7
IL15:Human Recombinant IL-15
OKT3:Purified anti-human CD3 Antibody(clone:OKT3)
種々のPBMCを用いて、各種培養条件において培養された培養物中の各細胞タイプの増殖率を測定した。培養において用いられた培養条件及び測定された増殖率を含むデータセットを作成した。データセットの一例を図21A及びBに示す。
同図において、例えば「IC3/28_12.5 IL7_50 IL15_50」に属する5つの行が、上記で述べたウェルの一つに相当する。その下の各5行についても、それぞれ1つのウェルに相当する。
同図において、「days」列は培養日数であり、3、7、10、及び14は、拡大培養及びフローサイトメータによる測定が行われた日である。「OKT3」列及び「IC3/28」列は培地中の抗体濃度を示し、「IL2」列、「IL7」列、及び「IL15」列は培地中のサイトカイン濃度を示す。「OKT3_accum.」列及び「IC3/28_accum.」列は培地中の抗体濃度累積値を示し、「IL2_accum.」列、「IL7_accum.」列、及び「IL15_accum.」列は培地中のサイトカイン濃度累積値を示す。
前記抗体濃度累積値は、「培地中抗体濃度」に「当該抗体濃度を有する培地において培養された日数」を乗じた値である。前記サイトカイン濃度累積値は、「培地中サイトカイン濃度」に「当該サイトカイン濃度を有する培地において培養された日数」を乗じた値である。
また、本技術において用いられるデータセットは、サイトカイン刺激データを含んでよい。サイトカイン刺激データは、特にはサイトカイン濃度に基づくデータであり、好ましくは、培養におけるサイトカイン濃度と培養日数の累積値(すなわち「サイトカイン濃度」×「培養日数」)である。
また、このように累積値を用いることによって、時間を考慮した学習済みモデルを生成することができ、或る時点での培養物の状態に基づき将来の当該培養物の状態を予測することができる。例えば、上記のデータは濃度×日数により算出された累積値を含むため、当該データは、累積値から一定濃度での刺激を続けた場合に何日間の培養が必要であるかを予測するための学習済みモデルを生成するために利用できる。また、培養日数の代わりに、例えば時間(hour)や分(minute)などの他の時間単位(time unit)が用いられてもよい。
同図において、例えば「IC3/28_12.5 IL7_50 IL15_50」に属する5つの行が、上記で述べたウェルの一つに相当する。その下の各5行についても、それぞれ1つのウェルに相当する。また、「IC3/28_12.5 IL7_50 IL15_50」に属する5つの行は、上記で図21Aに関して述べた「IC3/28_12.5 IL7_50 IL15_50」に属する5つの行に対応する。
同図において、「days」列は培養日数であり、3、7、10、及び14は、拡大培養及びフローサイトメータによる測定が行われた日である。同図において、「L+CD8+CD4-」列、「L+CD8-CD4+」列、及び「L+CD62L+」列は、培養された細胞群のうちの細胞タイプの割合を示し、それぞれCD8陽性細胞(CD4陰性)の割合、CD4陽性細胞(CD8陰性)の割合、及びCD62L陽性細胞の割合を示す。また、「CD4/CD8」列は、CD4陽性細胞の割合とCD8陽性細胞の割合の比を示す。
同図において、「L+8+_ratio」列、「L+4+_ratio」列、及び「L+62L+_ratio」列はそれぞれ、CD8陽性細胞の割合の変化率、CD4陽性細胞の割合の変化率、及びCD62L陽性細胞の割合の変化率を示す。当該変化率は、培養日数0日における割合に対する所定日数経過後における割合の比(すなわち「所定日数経過後における構成割合」/「0日における構成割合」)である。
また、「CD4/CD8_ratio」列は、CD4陽性細胞の割合とCD8陽性細胞の割合の比の変化率を示す。当該変化率は、培養日数0日における前記CD4/CD8比に対する所定日数経過後における前記CD4/CD8比の比(すなわち「所定日数経過後における前記CD4/CD8比」/「0日における前記CD4/CD8比」)である。
前記データセットを用いて、細胞構成の学習済みモデルを作成した。学習済みモデルの作成のためにディープラーニングを行うオープンソースソフトウェアを用いた。
当該予測精度データは、例えば上記で述べた決定係数などの、学習済みモデルの予測精度を示すデータを含んでよい。当該予測精度データは、例えば前記情報処理部に接続された出力装置(例えば表示装置など)によって出力(例えば表示)されうる。これにより、ユーザが、生成された学習済みモデルの予測精度を把握することができる。
〔1〕
細胞群を培養可能な細胞培養部と、
前記細胞群を測定可能な測定部と、
推定部と、を具備しており、
前記推定部は、前記細胞群の処理前の細胞に関する情報と、前記細胞群の処理後に達すべき所定の細胞に関する情報および処理前の前記細胞群に対する所定の処理条件のうち少なくとも一方と、に基づいて、前記所定の細胞に関する情報に前記細胞群を導出可能な処理条件、または、前記所定の処理条件により導出される前記細胞群の処理後の細胞に関する情報を推定する、
細胞処理システム。
〔2〕
前記推定部は、製品化された前記細胞の承認に関する情報に基づいて、前記所定の細胞に関する情報及び/又は前記所定の処理条件を設定する、〔1〕に記載の細胞処理システム。
〔3〕
前記測定部は、前記処理前の細胞に関する情報と前記処理後の細胞に関する情報と細胞群の処理中の細胞に関する情報のうち少なくとも1つを取得するように構成されている、〔1〕又は〔2〕に記載の細胞処理システム。
〔4〕
前記測定部は、画像取得部、及びシグナル検出部のうち少なくとも1つを含む、〔3〕に記載の細胞処理システム。
〔5〕
前記画像取得部により取得される画像は、染色画像および/又は非染色画像である、〔4〕に記載の細胞処理システム。
〔6〕
前記染色画像は、蛍光画像を含む、〔5〕に記載の細胞処理システム。
〔7〕
前記非染色画像は、明視野画像、位相差画像、偏光画像、及び、非染色画像と蛍光画像より学習された情報から識別され細胞の特徴ごとに疑似染色された画像のうち少なくとも1つを含む、〔5〕又は〔6〕に記載の細胞処理システム。
〔8〕
前記画像取得部は、CMOS、信号処理センサ、及びイベント検出センサのうち少なくとも1つより画像取得する、〔4〕~〔7〕のいずれか一つに記載の細胞処理システム。
〔9〕
前記所定の処理条件、または前記推定部により推定された処理条件に基づいて前記細胞を選別処理するよう制御する制御部を更に具備する、請求項1に記載の細胞処理システム。
〔10〕
前記所定の処理条件、または前記推定部により推定された処理条件に基づいて前記細胞を培養処理するよう制御する制御部を更に具備する、請求項1に記載の細胞処理システム。
〔11〕
前記所定の処理条件、または前記推定部により推定された処理条件に基づいて前記細胞を選別及び培養処理するよう制御する制御部を更に具備する、請求項1に記載の細胞処理システム。
〔12〕
前記制御部は、推定された前記処理条件又は前記処理後の細胞に関する情報に閾値を設定し、前記閾値に応じて、又はユーザに指定された情報に応じて前記細胞の製造中止、及び/又は再採取するよう処理する、〔9〕に記載の細胞処理システム。
〔13〕
前記制御部は、光選択的なリンカーを介して培養容器に固定された前記細胞に対して、光学制御により細胞を分取するよう処理する、〔9〕~〔12〕のいずれか一つに記載の細胞処理システム。
〔14〕
前記培養制御は、物理化学的環境、及び生理学的環境うち、少なくとも1つを制御する、〔10〕又は〔11〕に記載の細胞処理システム。
〔15〕
前記物理化学的環境の制御は、湿度、pH、浸透圧、酸素分圧、及び二酸化炭素分圧のうち少なくとも1つによる制御を含む、〔14〕に記載の細胞処理システム。
〔16〕
前記生理学的環境の制御は、培養液、刺激因子、転写因子、細胞密度のうち少なくとも1つによる制御を含む、〔14〕又は〔15〕に記載の細胞処理システム。
〔17〕
前記推定部により推定された前記処理条件により処理された前記細胞と、前記細胞を用いた治療に関する情報を入力情報として、前記細胞と前記治療に関する情報の関連性を学習する第一学習器と、を更に具備する、〔1〕~〔16〕のいずれか一つに記載の細胞処理システム。
〔18〕
前記推定部は、前記第一学習器と、前記処理前の細胞に関する情報と、に基づいて前記処理条件により導出される前記細胞群の処理後の細胞の治療に関する情報を推定する、〔17〕に記載の細胞処理システム。
〔19〕
前記処理前の細胞に関する情報と、前記推定部により推定された前記処理条件と、前記処理条件により処理された前記処理前の細胞を入力情報として、前記処理前の細胞に関する情報と前記処理条件の関連性を学習する第二学習器と、を更に具備する、〔1〕~〔18〕のいずれか一つに記載の細胞処理システム。
〔20〕
前記推定部は、前記第二学習器と、前記処理前の細胞に関する情報と、に基づいて、前記所定の細胞に関する情報に前記細胞群を導出可能な処理条件を推定する、〔19〕に記載の細胞処理システム。
〔21〕
前記処理前の細胞に関する情報は処理前の細胞の構成、状態、個数、割合、種類、増加率、生存率、遺伝情報、及び分子に関する情報のうち少なくとも1つを含む、〔1〕~〔20〕のいずれか一つに記載の細胞処理システム。
〔22〕
前記分子に関する情報は、転写因子や転写制御因子等の遺伝子発現制御因子、分子マーカの情報、細胞表面抗原の情報のうち少なくとも1つを含む、〔21〕に記載の細胞処理システム。
〔23〕
前記処理後の細胞に関する情報は、処理後の細胞の構成、状態、個数、割合、増加率、生存率、奏効率、再発率、及び副作用のうち少なくとも1つを含む、〔1〕~〔22〕のいずれか一つに記載の細胞処理システム。
〔24〕
前記処理条件は、刺激因子及び培養日数のうち少なくとも1つに関する培養条件を含む、〔1〕~〔23〕のいずれか一つに記載の細胞処理システム。
〔25〕
前記細胞群は、患者またはドナーから採取された末梢血単核球分画で構成される、〔1〕~〔24〕のいずれか一つに記載の細胞処理システム。
〔26〕
細胞群の処理前の細胞に関する情報と、
前記細胞群の処理後に達すべき所定の細胞に関する情報および処理前の前記細胞群に対する所定の処理条件のうち少なくとも一方と、に基づいて、
前記所定の細胞に関する情報に前記細胞群を導出可能な処理条件、または、前記所定の処理条件により導出される前記細胞群の処理後の細胞に関する情報を推定する推定部、を具備する、情報処理装置。
〔27〕
情報処理装置により推定された処理条件により処理された細胞と、前記細胞を用いた治療に関する情報を入力情報として、前記細胞と前記治療に関する情報の関連性を学習する、学習データ作成方法。
〔28〕
処理前の細胞に関する情報と、情報処理装置により推定された処理条件と、前記処理条件により処理された前記処理前の細胞を入力情報として、前記処理前の細胞に関する情報と前記処理条件の関連性を学習する学習データ作成方法。
〔29〕
サンプルに含まれる細胞群の処理前の細胞に関する情報と、
予め設定された前記細胞群の処理後に達すべき所定の細胞に関する情報および処理前の前記細胞群に対する所定の処理条件のうち少なくとも一方と、に基づいて、
前記所定の細胞に関する情報に前記細胞群を導出可能な処理条件、または、前記所定の処理条件により導出される前記細胞群の処理後の細胞に関する情報を推定する推定工程を含む、細胞処理方法。
Claims (29)
- 細胞群を培養可能な細胞培養部と、
前記細胞群を測定可能な測定部と、
推定部と、を具備し、
前記推定部は、前記細胞群の処理前の細胞に関する情報と、前記細胞群の処理後に達すべき所定の細胞に関する情報および処理前の前記細胞群に対する所定の処理条件のうち少なくとも一方と、に基づいて、前記所定の細胞に関する情報に前記細胞群を導出可能な処理条件、または、前記所定の処理条件により導出される前記細胞群の処理後の細胞に関する情報を推定する、
細胞処理システム。 - 前記推定部は、製品化された前記細胞の承認に関する情報に基づいて、前記所定の細胞に関する情報及び/又は前記所定の処理条件を設定する、請求項1に記載の細胞処理システム。
- 前記測定部は、前記処理前の細胞に関する情報と前記処理後の細胞に関する情報と細胞群の処理中の細胞に関する情報のうち少なくとも1つを取得するように構成されている、請求項1に記載の細胞処理システム。
- 前記測定部は、画像取得部、及びシグナル検出部のうち少なくとも1つを含む、請求項3に記載の細胞処理システム。
- 前記画像取得部により取得される画像は、染色画像および/又は非染色画像である、請求項4に記載の細胞処理システム。
- 前記染色画像は、蛍光画像を含む、請求項5に記載の細胞処理システム。
- 前記非染色画像は、明視野画像、位相差画像、偏光画像、及び、非染色画像と蛍光画像より学習された情報から識別され細胞の特徴ごとに疑似染色された画像のうち少なくとも1つを含む、請求項5に記載の細胞処理システム。
- 前記画像取得部は、CMOS、信号処理センサ、及びイベント検出センサのうち少なくとも1つより画像取得する、請求項4に記載の細胞処理システム。
- 前記所定の処理条件、または前記推定部により推定された処理条件に基づいて前記細胞を選別処理するよう制御する制御部を更に具備する、請求項1に記載の細胞処理システム。
- 前記所定の処理条件、または前記推定部により推定された処理条件に基づいて前記細胞を培養処理するよう制御する制御部を更に具備する、請求項1に記載の細胞処理システム。
- 前記所定の処理条件、または前記推定部により推定された処理条件に基づいて前記細胞を選別及び培養処理するよう制御する制御部を更に具備する、請求項1に記載の細胞処理システム。
- 前記制御部は、推定された前記処理条件又は前記処理後の細胞に関する情報に閾値を設定し、前記閾値に応じて、又はユーザに指定された情報に応じて前記細胞の製造中止、及び/又は再採取するよう処理する、請求項9に記載の細胞処理システム。
- 前記制御部は、光選択的なリンカーを介して培養容器に固定された前記細胞に対して、光学制御により細胞を分取するよう処理する、請求項9に記載の細胞処理システム。
- 前記培養制御は、物理化学的環境、及び生理学的環境うち、少なくとも1つを制御する、請求項10に記載の細胞処理システム。
- 前記物理化学的環境の制御は、湿度、pH、浸透圧、酸素分圧、及び二酸化炭素分圧のうち少なくとも1つによる制御を含む、請求項14に記載の細胞処理システム。
- 前記生理学的環境の制御は、培養液、刺激因子、転写因子、細胞密度のうち少なくとも1つによる制御を含む、請求項14に記載の細胞処理システム。
- 前記推定部により推定された前記処理条件により処理された前記細胞と、前記細胞を用いた治療に関する情報を入力情報として、前記細胞と前記治療に関する情報の関連性を学習する第一学習器と、を更に具備する、請求項1に記載の細胞処理システム。
- 前記推定部は、前記第一学習器と、前記処理前の細胞に関する情報と、に基づいて前記処理条件により導出される前記細胞群の処理後の細胞の治療に関する情報を推定する、請求項17に記載の細胞処理システム。
- 前記処理前の細胞に関する情報と、前記推定部により推定された前記処理条件と、前記処理条件により処理された前記処理前の細胞を入力情報として、前記処理前の細胞に関する情報と前記処理条件の関連性を学習する第二学習器と、を更に具備する、請求項1に記載の細胞処理システム。
- 前記推定部は、前記第二学習器と、前記処理前の細胞に関する情報と、に基づいて、前記所定の細胞に関する情報に前記細胞群を導出可能な処理条件を推定する、請求項19に記載の細胞処理システム。
- 前記処理前の細胞に関する情報は処理前の細胞の構成、状態、個数、割合、種類、増加率、生存率、遺伝情報、及び分子に関する情報のうち少なくとも1つを含む、請求項1に記載の細胞処理システム。
- 前記分子に関する情報は、転写因子や転写制御因子等の遺伝子発現制御因子、分子マーカの情報、細胞表面抗原の情報のうち少なくとも1つを含む、請求項21に記載の細胞処理システム。
- 前記処理後の細胞に関する情報は、処理後の細胞の構成、状態、個数、割合、増加率、生存率、奏効率、再発率、及び副作用のうち少なくとも1つを含む、請求項1に記載の細胞処理システム。
- 前記処理条件は、刺激因子及び培養日数のうち少なくとも1つに関する培養条件を含む、請求項1に記載の細胞処理システム。
- 前記細胞群は、患者またはドナーから採取された末梢血単核球分画で構成される、請求項1に記載の細胞処理システム。
- 細胞群の処理前の細胞に関する情報と、
前記細胞群の処理後に達すべき所定の細胞に関する情報および処理前の前記細胞群に対する所定の処理条件のうち少なくとも一方と、に基づいて、
前記所定の細胞に関する情報に前記細胞群を導出可能な処理条件、または、前記所定の処理条件により導出される前記細胞群の処理後の細胞に関する情報を推定する推定部、を具備する、情報処理装置。 - 情報処理装置により推定された処理条件により処理された細胞と、前記細胞を用いた治療に関する情報を入力情報として、前記細胞と前記治療に関する情報の関連性を学習する、学習データ作成方法。
- 処理前の細胞に関する情報と、情報処理装置により推定された処理条件と、前記処理条件により処理された前記処理前の細胞を入力情報として、前記処理前の細胞に関する情報と前記処理条件の関連性を学習する学習データ作成方法。
- サンプルに含まれる細胞群の処理前の細胞に関する情報と、
予め設定された前記細胞群の処理後に達すべき所定の細胞に関する情報および処理前の前記細胞群に対する所定の処理条件のうち少なくとも一方と、に基づいて、
前記所定の細胞に関する情報に前記細胞群を導出可能な処理条件、または、前記所定の処理条件により導出される前記細胞群の処理後の細胞に関する情報を推定する推定工程を含む、細胞処理方法。
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Citations (11)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
JP2010260831A (ja) | 2009-05-08 | 2010-11-18 | Kanagawa Univ | 光分解性ヘテロ二価性架橋剤 |
WO2011058721A1 (ja) | 2009-11-13 | 2011-05-19 | 株式会社 日立ハイテクノロジーズ | 細胞接着性光制御基材,細胞の解析分別方法及び細胞の解析分別装置 |
JP2011232259A (ja) | 2010-04-28 | 2011-11-17 | Sony Corp | 蛍光強度補正方法、蛍光強度算出方法及び蛍光強度算出装置 |
WO2017169259A1 (ja) | 2016-03-28 | 2017-10-05 | ソニー株式会社 | 細胞培養容器、細胞培養システム、細胞培養キット及び細胞培養方法 |
WO2017199651A1 (ja) * | 2016-05-18 | 2017-11-23 | ソニー株式会社 | 生体物質分析装置、生体物質分析システム、生体物質選別方法、生体物質分析用プログラム及び細胞培養容器 |
WO2018101004A1 (ja) * | 2016-12-01 | 2018-06-07 | 富士フイルム株式会社 | 細胞画像評価装置および細胞画像評価制御プログラム |
WO2018142702A1 (ja) | 2017-01-31 | 2018-08-09 | 株式会社ニコン | 培養支援装置、観察装置、及びプログラム |
WO2019082617A1 (ja) * | 2017-10-26 | 2019-05-02 | ソニー株式会社 | 情報処理装置、情報処理方法、プログラム及び観察システム |
WO2020054317A1 (ja) * | 2018-09-10 | 2020-03-19 | ソニー株式会社 | 制御装置、該制御装置を用いた微小粒子分取装置及び微小粒子分取システム、並びに制御方法、及び制御プログラム |
JP2020076736A (ja) | 2018-09-10 | 2020-05-21 | ソニー株式会社 | 微小粒子分取装置、細胞治療薬製造装置、微小粒子分取方法、及びプログラム |
WO2021049365A1 (ja) | 2019-09-11 | 2021-03-18 | ソニー株式会社 | 情報処理装置、情報処理方法、及びプログラム |
-
2021
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- 2021-12-28 JP JP2023502124A patent/JPWO2022181049A1/ja active Pending
- 2021-12-28 CN CN202180094103.7A patent/CN116888256A/zh active Pending
Patent Citations (11)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
JP2010260831A (ja) | 2009-05-08 | 2010-11-18 | Kanagawa Univ | 光分解性ヘテロ二価性架橋剤 |
WO2011058721A1 (ja) | 2009-11-13 | 2011-05-19 | 株式会社 日立ハイテクノロジーズ | 細胞接着性光制御基材,細胞の解析分別方法及び細胞の解析分別装置 |
JP2011232259A (ja) | 2010-04-28 | 2011-11-17 | Sony Corp | 蛍光強度補正方法、蛍光強度算出方法及び蛍光強度算出装置 |
WO2017169259A1 (ja) | 2016-03-28 | 2017-10-05 | ソニー株式会社 | 細胞培養容器、細胞培養システム、細胞培養キット及び細胞培養方法 |
WO2017199651A1 (ja) * | 2016-05-18 | 2017-11-23 | ソニー株式会社 | 生体物質分析装置、生体物質分析システム、生体物質選別方法、生体物質分析用プログラム及び細胞培養容器 |
WO2018101004A1 (ja) * | 2016-12-01 | 2018-06-07 | 富士フイルム株式会社 | 細胞画像評価装置および細胞画像評価制御プログラム |
WO2018142702A1 (ja) | 2017-01-31 | 2018-08-09 | 株式会社ニコン | 培養支援装置、観察装置、及びプログラム |
WO2019082617A1 (ja) * | 2017-10-26 | 2019-05-02 | ソニー株式会社 | 情報処理装置、情報処理方法、プログラム及び観察システム |
WO2020054317A1 (ja) * | 2018-09-10 | 2020-03-19 | ソニー株式会社 | 制御装置、該制御装置を用いた微小粒子分取装置及び微小粒子分取システム、並びに制御方法、及び制御プログラム |
JP2020076736A (ja) | 2018-09-10 | 2020-05-21 | ソニー株式会社 | 微小粒子分取装置、細胞治療薬製造装置、微小粒子分取方法、及びプログラム |
WO2021049365A1 (ja) | 2019-09-11 | 2021-03-18 | ソニー株式会社 | 情報処理装置、情報処理方法、及びプログラム |
Non-Patent Citations (7)
Title |
---|
CALLEGARI, A. J.KELLY, T. J.: "Shedding light on the DNA damage checkpoint", CELL CYCLE, vol. 6, 2007, pages 660 - 6 |
CELL, vol. 173, no. 3, 19 April 2018 (2018-04-19), pages 792 - 803 |
JOURNAL OF AMERICAN CHEMICAL SOCIETY, vol. 106, 1984, pages 6860 |
JOURNAL OF AMERICAN CHEMICAL SOCIETY, vol. 98, 1976, pages 843 |
MASATO T ET AL.: "Optical cell separation from three-dimensional environment in photodegradable hydrogels for pure culture techniques", SCIENTIFIC REPORTS, vol. 4, no. 4793, 2014 |
TETRAHEDRON LETTERS, vol. 1, 1962 |
TETRAHEDRON, vol. 53, 1997, pages 4247 |
Cited By (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2024079840A1 (ja) * | 2022-10-13 | 2024-04-18 | 株式会社日立製作所 | 培養装置の制御方法、および細胞培養を伴う培養装置の制御方法 |
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