WO2014102471A1 - Vaccins monovalents et polyvalents contre leishmania - Google Patents
Vaccins monovalents et polyvalents contre leishmania Download PDFInfo
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- WO2014102471A1 WO2014102471A1 PCT/FR2013/000373 FR2013000373W WO2014102471A1 WO 2014102471 A1 WO2014102471 A1 WO 2014102471A1 FR 2013000373 W FR2013000373 W FR 2013000373W WO 2014102471 A1 WO2014102471 A1 WO 2014102471A1
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K39/00—Medicinal preparations containing antigens or antibodies
- A61K39/002—Protozoa antigens
- A61K39/008—Leishmania antigens
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P33/00—Antiparasitic agents
- A61P33/02—Antiprotozoals, e.g. for leishmaniasis, trichomoniasis, toxoplasmosis
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- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
- Y02A50/00—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
- Y02A50/30—Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change
Definitions
- the present invention relates to mono- or multi-epitopic peptide compounds for the prevention and treatment of leishmaniases in mammals and in particular in humans, canids, felids and equines. More particularly, the invention also relates to vaccines comprising _le_sd . its peptide compounds in conditions ensuring immunization leading to effective protection of human or vaccinated animals against one or more leishmanias.
- the major parasitic endemic diseases are, by far, the causes p important ius morbidity and mortality not only for humans but for all other animals both domestic and wild.
- Leishmaniases are among the most serious parasitic infections affecting humans in the world. Three hundred and fifty million people are exposed in eighty - eight countries spread over four of the five continents, and sixteen million of them carry the parasite. They are responsible for a broad spectrum of clinical manifestations (cutaneous, mucocutaneous and visceral).
- Visceral leishmaniasis is caused by parasites of the Leishmania donovani complex (L. infantum, L. chagasi and L. donovani) which are intracellular parasites of the macrophage.
- the leishmanias donovani complex have an ability to disseminate to all the deep organs where they multiply. Patients with LV then present a clinical picture associating a moderate but persistent fever, hepatosplenomegaly and pancytopenia generally leading to death if no specific treatment is initiated sufficiently quickly.
- Visceral leishmaniasis also affects the oopulat1 on can; ro, q L is a reservoir of parasites supplying the transmission cycle continuously. It is due to L. infantum / 'chagasi species responsible for a zoonosis of canines, domestic and wild widespread in the world. It affects millions of dogs in Europe, Asia, North Africa and South America. Symptomatic but asymptomatic dogs are a source of parasites for transmission of LV in humans.
- mice including the mouse strain BALB / c susceptible to many species of Leishmania have been and are still used to evaluate the efficacy of a candidate vaccin.notance ⁇ , 1 against it ' .iro leis mar. icsc viscera iO.
- Numerous subunit vaccines consisting of purified (first generation vaccine) or recombinant (second generation vaccine) native proteins have been tested (Goto et al, Clinical and Vaccine Immunology, 2011). Some vaccine candidates have provided a good level of protection against experimental infection in mice. Protections could reach up to 81% depending on the antigen and the adjuvant.
- the Leish 111 f MPL SE of the Infections Disease Research Institute (IRDI) in Seattle is a chimeric vaccine called LEISH-F1 consisting of 3 recombinant fusion proteins (TSA-LmSTI1-LelF) formulated with monophosphorylated lipid and squalene in a stable emulsion (MPL-SE).
- TSA-LmSTI1-LelF 3 recombinant fusion proteins
- MPL-SE monophosphorylated lipid and squalene in a stable emulsion
- Leish-111 f MPL-SE does not protect dogs exposed to natural infection with L. infantum (Gradoni et al. al, Veterinary Research, 2005, Gradoni, Veterinary Research, 2006).
- CaniLeish® which is a product composed of excretion secretion antigens (AES) promastigotes of L. infantum and marketed in Europe since 2011.
- AES excretion secretion antigens
- Vaccination not only controls the development of the disease but also significantly decreases the parasite load in the dog and thus contributes to the interruption of the transmission cycle of LV in the sandfly (vector of the disease), the dog and the man.
- the production yields of the ESAs are not sufficient to allow an industrial scale production of a human vaccine.
- the production of AES is quite complex and induces a product at too high a price, adapted to a relatively small dog market.
- the applicant has demonstrated new epitopes with high immunogenicity against leishmaniasis, for vaccine development and e f fective fi nar.ciorenom accessible.
- the solution to the problem posed firstly relates to an epitope having a sequence chosen from:
- SEQ ID NO: 1 T -P-E-Q-R-T-N-T-L (HLA-B07 epitope)
- SEQ ID No. 3 T -L-PEM -P -VG-V (HLA-A02 epitope) ;
- SEQ ID NO: 4 P -E -MPA- ⁇ G -VD -Y (epitope HLA-A01);
- SEQ ID NO: 6 A-R-G-A-R-G-R-E-G-Y (HLA-B44 epitope);
- SEQ ID NO: 7 A -R-G-A-R-G-R-E-G (HLA-B27 epitope)
- SEQ ID NO: 8 E -G-Y-F-V-T-D-E-K (HLA-AO3 epitope)
- SEQ ID NO: 10 E-G-Y-F-V-T-D-E-K-T-G-L-V-Y-R-D-G-G-
- X 5 Y or no amino acid
- the Applicant has considered the importance of proposing an innovative vaccine strategy based on antigenic / peptide fragments capable of activating in a sustainable manner the specific cell ⁇ immunity directed against these parasites.
- the Applicant's peptide vaccine strategy is based on the identification and selection of immunodominant peptides carried by the sequence of a virulence protein characterized as the major immunogen of the excreted-secreted antigens by Leishmania, the PSA protein (for Promastigote Antigen surface) soluble (principal active principle of the vaccine CaniLeish®), common and very preserved within species of leishmania, responsible for the various human infections.
- Peptide vaccination is based on the molecular and cellular basis of T cell antigen recognition.
- the establishment of specific immunity depends to a large extent on the degradation and association of antigenic fragments, peptides, molecules of the Major Histocompatibility Complex (MHC, HLA, human leukocyte antigen, for humans).
- MHC Major Histocompatibility Complex
- HLA human leukocyte antigen
- This combination is made specific for a particular HLA molecule by amino acid residues constituting the anchoring motifs of the peptide.
- the complexes thus formed are recognized by T cells via a membrane receptor (TcR) and require a specific interaction with certain amino acids of the epitope T.
- TcR membrane receptor
- the epitopes T are ligands of HLA molecules with strong or moderate affinities. They are presented to CD8 + (cytotoxic) or CD4 + (auxiliary) T lymphocytes by HLA class I or class II molecules, respectively.
- TcR / HLA / peptide tri-molecular complexes
- epitope, peptide compound or peptide is understood to mean any epitope, peptide compound or peptide defined by its sequence, as well as its analogous derivatives, muteins and homologues. Since the epitopes are peptide compounds having approximately 8 to 15 amino acids, the term "peptide compound” is used interchangeably to designate an epitope or a peptide compound.
- analog derivative refers to compounds having a sequence and a polypeptide structure having one or more amino acid additions, substitutions and / or deletions, relative to the peptide compounds defined above, in which the extent that the modifications do not destroy the immunogenic activity.
- mutant derivative is intended to mean peptides having one or more elements that mimic the peptide.
- the particularly preferred analogs include conservative substitutions, that is, substitutions or substitutions without consequences on the function and the final structure of the protein.
- amino acid family composed of aspartate and glutamate
- family of basic amino acids composed of lysine, arginine and histidine
- nonpolar amino acids composed of alanine, leucine, isoleucine, proline, phenylalanine, methionine and tryptophan;
- uncharged polar amino acids such as glycine, asparagine, glutamine, cysteine, serine, threonine and ty-rosine.
- valine is close to alanine; the substitution of one by the other does not generally disturb the functioning of the protein.
- Similarity matrices M, which record the set of scores M (a, b). obtained by substituting the amino acid a with the acid b in a given peptide sequence.
- M similarity matrices
- PAM Dayhoff matrices
- BLOSUM Henikoff matrices
- a Venn diagram can also be used to highlight the relationships between the 20 amino acids of natural origin as a function of a selection of physico-chemical properties considered important in the determination of the protein structure.
- the term “homologous derivative” means peptide compounds having a certain percentage of peptide identity.
- identity means that the amino acids of two distinct peptide sequences are definitely present. The percent identity is determined by directly comparing the sequences between two peptide compounds by aligning said sequences and counting the exact number of amino acids. mismatch between the two aligned sequences. Then, divide by the length of the shortest sequence and multiply the result by one hundred.
- the percentage of identity can also be determined using computer programs well known to those skilled in the art such as Dotlet, produced by the company Dotplot, Clustal X and W as described in the publication Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG: The CLUSTAL_X Windows interface: flexible strategies for multiple sequence alignment. Nucleic Acids Res 1997, 25 (24): 4876-4882 or orgenstern B as described in the publication DIALIGN 2: improvement of the segment-tosegment approach to multiple sequence alignment. Bioinformatics 1999, 15 (3): 211-218.
- the BLOCKS database (Henikoff and Henikoff, 1991) gives, in the form of multiple alignments without insertion-deletion (or blocks), the subsequences of Swissprot which correspond to conserved regions.
- two peptide sequences are said to be "substantially homologous" one relative to each other, provided that they have at least 50%, preferably at least 75%, more preferably at least 85%, more preferably at least 90% and more preferably at least 95% or more sequence identity over a defined length of peptide molecules.
- the epitopes or peptide compounds which are the subject of the invention are linked to carriers making them more immunogenic.
- a carrier mention may be made of KLH molecules for Keyhole Limpet Hemocyanin, lipopeptides of palmitoyl type, or their derivatives.
- L 1 isoprenylation and N-myristoylation are co-translational modifications or immediately post-translational and the group which is attached to the rest of the degradation of the protein.
- Palmitoylation is post-translational. This change is reversible and faster than the "turn ⁇ over" protein degradation: it can be regulated. Glypiation is co- and post-translational.
- the peptides according to the invention are preferably palmitoylated peptides because these derivatives interact with the lipid components of the membrane of the target cells, which are for example macrophages, dendritic cells or else neutrophils, promote their penetration and convey them to the skin. inside of them to present them to the immune system.
- the target cells which are for example macrophages, dendritic cells or else neutrophils, promote their penetration and convey them to the skin. inside of them to present them to the immune system.
- glycosylated peptides such as, for example, mannosylated conjugates and MAPs, for Multiple Antigenic Peptides.
- the epitopes which are the subject of the invention may further contain one or more protective groups.
- the form of protection must of course be a biologically compatible form and must be compatible with use in the pharmaceutical field. Numerous biologically compatible forms of protection can be envisaged, they are well known to those skilled in the art such as, for example, acylation or acetylation of the amino terminus, or amidation or esterification of the carboxy terminus.
- the invention also relates to an epitope as defined above, characterized in that it is in protected form or not.
- Protection based on a substitution on the amino-terminus by an acetyl group, a benzoyl group, a tosyl group or a benzyloxycarbonyl group can be used.
- a protection based on the amidation of the hydroxyl function of the carboxy-terminal end is used by a NYY group with Y representing a C1 to C4 alkyl chain, or esterification with an alkyl group.
- the peptide derivatives also relate to amino acids and peptides linked together by a pseudo-peptide bond.
- pseudo-peptide bond is meant all types of bonds capable of replacing conventional peptide bonds.
- the geometry of the molecules is such that they can theoretically be in the form of different optical isomers.
- amino acids constituting the peptide according to the invention can be in L-, D- or DL- configuration.
- the epitopes and peptide compounds according to the invention can be obtained either by conventional chemical synthesis (in the solid phase or in liquid homogeneous phase) or by enzymatic synthesis, from constituent amino acids or their derivatives.
- the epitopes and peptide compounds according to the invention may also be obtained by fermentation of a strain of bacteria, whether modified or not, by genetic engineering, or by extraction of proteins of animal or vegetable origin, preferably of plant origin, followed by controlled hydrolysis which releases peptide fragments totally or partially corresponding to the epitopes and peptide compounds according to the invention.
- the Applicant was able to highlight that the different epitopes according to the invention are consensus sequences common to the main species of leishmania and have a strong and medium affinity for all the MHC (major histocompatibility complex) molecules of mammals, and more particularly for all the molecules of the HLA (HLA for human leukocyte antigens), oritarily represented in the human populations most severely affected by these conditions.
- MHC major histocompatibility complex
- HLA human leukocyte antigens
- the immunogenic antigenic fragments (peptides) of sufficient length must contain a series of epitopes capable of be presented by several types of HLA class I and II molecules.
- HLA molecules are highly polymorphic. Indeed, there are over 2500 HLA class I (HLA-I) proteins and more than 1000 HLA class II (HLA-II) proteins. However, some of these HLA molecules, closely related in sequence and in spatial conformation, can present epitopes common to the T cells. The grouping of several thousand HLA molecules is now described in a little more than twenty categories, called "HLA supertypes" with highly conserved epitopes for each supertype. In addition to the development of peptide vaccines, there is the multiepitopic or polyepitopic approach (peptide containing several epitopes). This multi-epitopic approach is advantageous for the development of a vaccine for the entire world population.
- the immunogenic antigenic fragments (peptides) of sufficient length must contain a series of epitopes capable of being presented by several supejrtypes_ of HLA-I and -II molecules. ⁇
- the epitopes object of the invention have a high immunogenic capacity.
- T epitopes are antigenic sequences that are recognized by T cells. For example in humans, T epitopes arise from the degradation of antigens by the presenting cells and are presented to CD8 + (cytotoxic) or CD4 + (auxiliary) T cells by the HLA molecules of class I or class II respectively. T epitopes are therefore necessarily ligands of HLA molecules and are indeed part of peptides that bind to HLA molecules with strong or moderate affinities.
- Cells expressing the major class II istocompatibility complex may also present microbial antigens via CD1 to gamma-delta T cells.
- MHC major histocompatibility complex
- consanguinity by decreasing the number of different MHCs expressed by an individual, decreases his immune capacities. They also differ according to antigen exposure modalities (dose and route of administration), due to variations in the presentation capabilities of different types of presenting cells. For example, the cells involved in the presentation will be different cutaneous or digestive.
- the peptide range produced by a given antigen will be different according to the presenting cell (cleavage modalities), and according to the species and the individual (MHC allele).
- the genicidal compounds according to the invention have been selected and designed to ensure the vaccination and therapeutic coverage of the populations most severely affected by the main pathogenic species of leishmania. They are intended to induce and characterize the prevention or treatment of diseases in mammals whose protective immunity depends on the stimulation of Th1-type lymphocytes and cytotoxic T-cells, characteristic of a state of delayed-type hyperstimulation. .
- Th1 or Th2 type immune state Many pathological situations are associated with a Th1 or Th2 type immune state.
- the exacerbation of the Th2 pathway corresponding to a state of immediate hyperstimulation, induces certain conditions such as canine atopic dermatitis, allergies and asthma.
- this Th1 immune state is in full correlation with a state of resistance to intracellular pathogens such as Leishmania, Trypanosoma, Candida, Mycobacterium and Listeria.
- the literature over the last decade has designated the allergen-specific T lymphocyte as the conductor of the immunoallergic reaction (Magnan A et al., "Cytokines, from atopy to athsma: the Th2 dogma revisited" Cell Mol Biol, 2001, 47, 679-687).
- T cells the IL-4 producing Th2 subpopulation appears to be in the foreground and necessary for the induction of this reaction. It is therefore appropriate that strategies are established to specifically target lymphocytes and in particular Th2.
- This type of strategy can also be followed for these treatments by controlling cell-mediated responses to a Th1-like immune state and by promoting cytotoxic cellular responses, allowing for antagonism and control of the immune system. infectious process.
- the subject of the invention is a peptide compound comprising 1, 2, 3 or 4 epitopes of SEQ ID NO: 1 to 10 as described above, optionally separated by a peptide spacer comprising 1 to 8 amino acids. .
- the peptide spacers used are Y or TV, or their analogues.
- peptide compounds comprising 2 epitopes of sequence SEQ ID Nos. 1 to 10 as described above, mention may be made of:
- SEQ ID NO: 11 T-P-E-Q-R-T-N-T-L-T-V-E-L-G-K-K-W-I-G; or
- SEQ ID NO: 12 T-L-P-E-M-P-V-G-V-P-E-M-P-A-G-V-D-Y; or
- SEQ ID NO: 13 A-R-G-R-E-G-Y-F-L-A-R-G-A-R-G-R-E-G-Y-E-G-Y-F-V-T-D.-E-K;
- FIG. 1 represents the localization of the HLA-I and HLA-II epitopes on the Nter-PSA sequences of the main Leishmania species.
- FIG. 2 represents the localization of the HLA-I and HLA-II epitopes on the Cter-PSA sequences of the main Leishmania species, in particular on the beginning of the Cter-PSA sequence called "zone 1".
- FIG. 3 represents the localization of the HLA-I and HLA-II epitopes on the Cter-PSA sequences of the main Leishmania species, in particular on the second part of the Cter-PSA sequence called "zone 2".
- FIGS. 1 to 3 represent in silico prediction maps of the high and medium affinity rich epitope-rich zones for the HLA class I and HLA class II molecules on the amino (Nter) - and carboxy (Cter) -terminal PSA sequences.
- FIG. 4 represents the peptide compounds SEQ ID Nos. 11 to 14 as well as their cutting into epitopes and the position of a spacer between the epitopes SEQ ID No. 1 and SEQ ID No. 2 of the peptide compound SEQ ID No. 12 .
- FIG. 5 represents the result of an algorithm for predicting the proteasome cleavage sites of various peptide compounds derived from the amino-terminal part of different PSAs.
- FIG. 6 shows the injection pattern used in the study of the immune status of the dogs before and after vaccination with the CQmpoids.
- the peptide compounds according to the invention are chosen from:
- SEQ ID NO: 9 T-N-T-L-A-V-L-Q-A-F-G-R-A-I-P-E-L-G-K-K-W; or
- SEQ ID NO: 10 E-G-Y-F-V-T-D-E-K-T-G-L-V-Y-R-D-G-G-V-A-A-S-S-G; or
- SEQ ID NO: 11 T-P-E-Q-R-T-N-T-L-T-V-E-L-G-K-W-I-G
- SEQ ID NO: 12 T-L-P-E-M-P-V-G-V-P-E-M-P-A-G-V-D-Y; or
- SEQ ID NO: 13 A-R-G-R-E-G-Y-F-L-A-R-G-A-R-G-R-E-G
- the peptide compounds SEQ ID No. 9 to 13 include their analog derivatives, muteins and homologues.
- a third subject of the invention relates to a composition as a pharmaceutical product, for veterinary or human use, comprising at least:
- a peptide compound comprising 1, 2, 3 or 4 epitopes of sequence SEQ ID No. 1 to 10, optionally separated by a spacer as defined above; or
- the invention also relates to such a composition for use in prophylactic and therapeutic vaccination against one or more leishmania such as Leishmania donovani, Leishmania infantum, Leishmania chagasi, Leishmania mexicana, Leishmania amazonensis, Leishmania venezuelensis, Leishmania tropica, Leishmania major. , Leishmania aethiopica, Leishmania (Viannia) braziliensis, Leishmania (Viannia) guyanensis, Leishmania (Viannia) panamensis, Leishmania (Viannia) peruviana.
- leishmania such as Leishmania donovani, Leishmania infantum, Leishmania chagasi, Leishmania mexicana, Leishmania amazonensis, Leishmania venezuelensis, Leishmania tropica, Leishmania major.
- Leishmania aethiopica Leishmania (Viannia) braziliensis, Le
- composition according to the invention is suitable for use in prophylactic and therapeutic vaccination directed against at least 3, preferably at least 7, more preferably at least 10 and more preferably against all of the leishmanias listed above. -above.
- composition according to the invention is administered subcutaneously, intradermally, intramuscularly, intravenously, parenterally or orally.
- An additional object of the invention relates to a composition as defined above as a drug, vaccine, or diagnostic reagent in vitro and / or in vivo, for induction or diagnosis, in a mammal, from the passage of a Th2 type immune state to a Th1 type immune state.
- An additional object of the invention relates to a composition as defined above as a medicament, vaccine, or diagnostic reagent in vitro and / or in vivo, for the induction or diagnosis, in a mammal, of specific antibodies and more particularly IgG2 isotypes.
- An additional problem is to solve the present invention is to provide a vaccine capable de_ Confe .. er. __a
- leishmaniasis different species of leishmaniasis.
- the large antigenic community shared by leishmania allows for the development of a single polyvalent vaccine consisting of common and highly conserved immunogens.
- Targeting a common antigen (s) to all Leishmania species as a vaccine should undoubtedly be a real benefit in terms of cross-vaccination.
- a fourth subject of the invention relates to a vaccine against Leishmania comprising at least:
- a peptide compound comprising 1, 2, 3 or 4 epitopes of SEQ ID NO: 1 to 10, optionally separated by a spacer as defined above; or
- Said vaccine is advantageously used for a prophylactic and therapeutic vaccination directed against one or more Leishmania chosen from Leishmania donovani, Leishmania infantum, Leishmania chagasi, Leishmania mexicana, Leishmania amazonensis, Leishmania venezuelensis, Leishmania Tropica, Leishmania major, Leishmania aethiopica, Leishmania ⁇ Viannia) braziliensis, Leishmania (Viannia) guyanensis, Leishmania (Viannia) panamensis, Leishmania (Viannia) peruvian.
- Said vaccine object of the invention is advantageously intended for humans, canids, felids and equines.
- the vaccine object of the invention is intended for humans and dogs.
- the vaccine according to the invention comprises at least two epitopes or peptide compounds of which at least one epitope is chosen from:
- a peptide compound comprising 1, 2, 3 or 4 epitopes of sequence SEQ ID No. 1 to 10, optionally separated by a spacer as defined above; or
- the vaccine according to the invention comprises at least two epitopes or peptide compounds chosen from:
- a peptide compound comprising 1, 2, 3 or 4 epitopes of SEQ ID NO: 1 to 10, optionally separated by a spacer as defined above; or
- an additional problem to be solved by the present invention is to have a vaccine capable of providing vaccination coverage worldwide.
- This vaccine candidate must therefore preferably be recognized by all the molecules of the Major Complex of Histocompatibility class I and class II mainly represented in the human populations most severely affected by these conditions.
- a vaccine against leishmaniasis should also meet a number of more specific requirements.
- the development of such a vaccine is accompanied by additional difficulties due to the complexity of the life cycle of Leishmania, genetic diversity (more than 20 species of leishmania, its responsibility for human infections).
- An additional difficulty in achieving the last objective of the present invention is not only to conduct a study on visceral leishmaniasis and to obtain transposable results with efficacy and safety to the dog and to the man, but to obtain a vaccine unique for the prevention and treatment of all Leishmania species in mammals, and taking into account the complexity of human HLA polymorphism.
- the vaccine according to the invention advantageously comprises, on the one hand, at least one peptide compound chosen from SEQ ID No. 9 and 10;
- At least one peptide compound chosen from the sequences SEQ ID NO: 11 to 13,
- the above peptide compounds include their analog derivatives, muteins and homologs.
- the peptide derivatives of the above compounds having at least five contiguous amino acids will preferably be chosen.
- immunogenic antigenic fragments of sufficient length must preferably contain a series of epitopes capable of being presented by several types of molecules HLA-I and -II.
- the detection of first peptides carried by the carboxy-terminal portion of the PSA major antigen has made it possible to obtain in dogs a peptide vaccine candidate which induces a cell-mediated response conferring a good level of protection against an experimental infection with Leishmania infantum (patent FR2829767) as well as a significant IgG2 specific antibody response making it possible to distinguish in an endemic zone a vaccinated host from an unvaccinated but infected host (patent FR2932802).
- the Applicant has been able to demonstrate that the epitopes or peptide compounds SEQ ID Nos. 1 to 8, SEQ ID Nos. 11 to 13, are peptide compounds having an affinity. for the molecules of the Major Complex of Class I Histocompatibility.
- the vaccine according to the invention therefore comprises, on the one hand, a; less ur. or pool salts, which are selected from SEQ ID Nos. 9 and 10;
- the vaccine according to the invention comprises, in combination, the five multiepitopic peptide compounds SEQ ID No. 9 to 13, said sequences being as defined above.
- the above peptide compounds include their analog derivatives, muteins and homologues.
- the peptide compounds which have been advantageously selected are intended to induce the prevention or the treatment of leishmaniasis in mammals, in particular in humans, whose protective immunity depends on the stimulation of Th1 lymphocytes (CD4 + helper T cells) and CD8 + cytotoxic T lymphocytes.
- Th1 lymphocytes CD4 + helper T cells
- CD8 + cytotoxic T lymphocytes CD8 + cytotoxic T lymphocytes.
- This Th1 and cytotoxic immune state is fully correlated with a state of resistance to intracellular pathogens such as Leishmania, Trypanosoma, Candida, Mycobacterium and Listeria.
- HLA-I CD8 + cytotoxic response
- HLA-II CD4 + helper responses
- the global human ion was determined and supertypes for the design of a leishmaniasis vaccine were selected.
- the vaccine is subject to
- Linvens ion further comprises . It is also preferred to increase the immune response to the peptide compounds of the invention.
- Adjuvants are, most often, mineral substances, oily or derived from certain microorganisms.
- the adjuvant (s) associated with the peptide compounds that are the subject of the invention induce a cell-mediated response and are selected from the classes TLR3, TLR4, TLR5, TLR7, TLR8, TLR9, saponins, oil-in-water or water emulsions. in oil, polysaccharides, cationic liposomes, virosomes or polyelectrolytes.
- the ratio of peptide compounds to adjuvant is between 3/1 and 3/3.
- the vaccine further comprises a disulfide-cycled peptide compound composed of a 34 amino acid sequence and designated E34P.
- This peptide compound of 34 amino acids (E34P) is composed of the following sequence SEQ ID No. 14: EDE-HKGKYCRLGNDCRTTEPTTTA-TPRGTPT-PAP.
- This peptide compound is cyclized by disulfide bridge between cysteine at position 9 (Cys 9) and cysteine at position 15 (Cys 15).
- the peptide compound E34P is advantageously capable of inducing an important antibody response making it possible to discriminate in an endemic zone a vaccinated host of an unvaccinated but infected host.
- This cycle is gold; of the peptide compound is essential for the appearance of IgG2 specific antibodies, the disulfide bond cyclization between cysteines 9 and 15 inducing a specific conformation responsible for this IgG2 synthesis.
- the non-cyclization of the peptide compound in Cys 9 / Cys 15 induces only a slight synthesis IgG2 sometimes difficult to detect.
- the peptide compound E34P includes its analog derivatives, muteins and homologues as defined above.
- the vaccine according to the invention comprises the peptide compounds which are the subject of the invention in the following report:
- the vaccine according to the invention comprises the peptide compounds that are the subject of the invention as well as the peptide compound E34P in the following ratio:
- a final problem is to solve the present invention is to have a vaccine with the ability to induce immune responses to distinquer a vaccinated host an infected host. Indeed, as for many parasitic diseases, the clinical diagnosis remains random because the symptoms are not very specific, often absent (there are many asymptomatic carriers) and really appear only during a very advanced phase of the infection, which then becomes extremely important here to treat. ! Serological diagnosis consisting of the detection of specific circulating antibodies is performed routinely (indirect immunofluorescence technique). A vaccine, when administered, usually generates specific antibodies that very often can also be produced during an infection. The presence of such antibodies in a host can then be confusing in the sense that infection and vaccination have the same signature.
- the vaccine further comprises at least one signature.
- the signature may be any antigen capable of generating specific antibodies upon immunization but not produced during infection.
- E34P disrupted cyclic peptide compound
- This peptide compound of 34 amino acids is composed of the following sequence SEQ ID No. 14: EDE-HKGKYCRLGNDCRTTEPTTTA-TPRGTPT-PAP.
- This peptide compound is cyclized by disulfide bridge between cysteine at position 9 (Cys 9) and cysteine at position 15 (Cys 15).
- the invention also relates to a nucleotide sequence coding for:
- a peptide compound comprising 1, 2, 3 or 4 epitopes of sequence SEQ ID No. 1 to 10, optionally separated by a spacer as defined above; or
- the invention also relates to an expression vector comprising at least one nucleotide sequence as defined above, as well as the means necessary for their expression.
- the invention relates to a diagnostic reagent comprising:
- a peptide compound comprising 1, 2, 3 or 4 epitopes of sequence SEQ ID No. 1 to 10, optionally separated by a spacer as defined above; or
- HLA-I and -II supertypes represent the mean frequency of HLA-I and -II supertypes in countries most affected by leishmaniasis in the global population and associated haplotypes.
- HLA-A A01 28 B08, B27, B44 59.2 B08, B44, B62 25.2
- the Applicant then determined the combinations of HL7A supertypes of class I to be considered for the search and identification of multiepitopic peptide compounds T capable of providing coverage. Vaccination of the most 'seriously affected by leishmaniasis populations.
- Table 2 below highlights the supertypes selected and shows that taking into account several HLA supertypes, especially for HLA-I, ensures a better vaccination coverage of the world population.
- HLA-I supertypes which must be recognized by the peptide compounds used in the composition of a vaccine candidate according to the invention to provide coverage.
- vaccine acceptable against leishmaniasis are supertypes HLA-A02, A03 and HLA-B07.
- HLA-I supertypes that must be recognized by ⁇ the peptide compounds are the supertypes HLA-A01, A02, A03, A24 and HLA-B07 and B44, more preferably the HLA supertypes A01, A02, A03, A24 and HLA-B07, B27, B44, B58 and B62.
- supertypes HLA-I which must be recognized by the Peptide compounds are supertypes HLA-A01, A02, A03, A24 and HLA-B07, B08, B27, B44, B58 and B62 listed in Table 1 above.
- supertypes selected are supertypes HLA-DR1, DR2, DR3, DR4, DR5, DR7, DRB5 and DPB1.
- the Applicant has been able to establish that a vaccine comprising epitopes or multi-epitopic compounds recognized by all of the HLA supertypes above would thus ensure optimal vaccination coverage in echo! :: * or.d Lale.
- Example 2 Identification of the consensus sequences in the different PSAs (for Promastigote Surface Antigen).
- the amino-terminal sequences of the PSA (Nter-PSA) of the main Leishmania species are listed below. They are represented without the signal peptide of the excretion-secretion pathways.
- Cter-PSA carboxy-terminal PSA
- GPI anchoring The sequences.
- the amino-terminal sequences of PSA were aligned to locate the most conserved regions between PSA of different Leishmania species.
- Table 3 illustrates the alignment of the amino-terminal sequences of the different PSAs (Nter-PSA).
- the amino acids shown in white on a black background highlight the sequences with the most homology and which are the most conserved. These are consensus sequences.
- the different symbols represented in the sequences highlight the degree of homology or identity between the different aligned sequences.
- the symbol “*” indicates that the amino acid of the rank considered is the same for each sequence, one speaks about identity.
- the symbol “:” indicates strong homology and the symbol ". "Indicates, meanwhile, a low homology.
- the sequences studied come from different types of leishmania.
- the different abbreviations in Table 3 below indicate what type of leishmania the studied sequences come from: "LMJ” for Leishmania major, “LDI” for L. infantum, “LDD” for L. donovani, “LCHA” for L. chagasi , “LAMA” for L. amazonensis, “LBRA” for L. braziliensis and “LTRO” for L. tropica.
- Example 3 Selection and optimization of epitopes as a function of their affinity with the different HLA class I and HLA class II molecules.
- FIGS 1, 2 and 3 illustrate the location of HLA epitopes on sequences of different PSAs.
- SEQ ID NO: 1 T-P-E-Q-R-T-N-T-L (HLA-B07 epitope);
- SEQ ID NO: 2 E-L-G-K-K-W-I-G (HLA-B08 epitope);
- SEQ ID NO: 3 T-L-P-E-M-P-V-G-V (HLA-A02 epitope);
- SEQ ID NO: 4 P-E-M-P-A-G-V-D-Y (HLA-A01 epitope);
- SEQ ID NO: 6 A-R-G-A-R-G-R-E-G-Y (HLA-B44 epitope);
- SEQ ID NO: 7 A-R-G-A-R-G-R-E-G (HLA-B27 epitope);
- SEQ ID NO: 8 E-G-Y-F-V-T-D-E-K (HLA-AO3 epitope);
- SEQ ID NO: 9 T-N-T-L-A-V-L-Q-A-F-G-R-A-I-P-E-L-G-K-K-W;
- SEQ ID NO: 10 E-G-Y-F-V-T-D-E-K-T-G-L-V-Y-R-D-G-G-V-A-A-S-S-G.
- the epitopes with the highest affinity for HLA-I molecules were assembled into multiepitopic peptide compounds (from 18 to 28 amino acids) in order to increase the chances of activation of the immune system.
- SEQ ID NO: 11 T-P-E-Q-R-T-N-T-L-T-V-E-L-G-K-K-W-I-G
- SEQ ID NO: 12 T-L-P-E-M-P-V-G-V-P-E-M-P-A-G-V-D-Y;
- SEQ ID NO: 13 A-R-G-R-E-G-Y-F-L-A-R-G-A-R-G-R-E-G-Y-E-G
- Figure 4 illustrates the epitope composition of the three selected HLA-I peptide compounds (affinity with the HLA-I supertypes involved on the larger ones).
- these peptide compounds will be synthesized in their palmytoyl () form.
- HLA-II multi-epitope peptide compounds :
- Nter PSA T-N-T-L-A-V-L-Q-A-F-G-R-A-I-P-E-L-G-K-K-W (SEQ ID No. 9);
- Cter-PSA-zone 1 P-D-S-W-A-Q-K-A-G-L-V-V-T-I-E-D-
- the NetMHCII 2.2 server can for example be used to predict the affinity of different peptides with the different HLA types. It predicts the binding of peptides to HLA-DR, HLA-
- HLA-DP as well as MHC class 2 alleles of the mouse using an artificial network of neurons.
- Prognostics can be obtained for 14 HLA-DR alleles covering the 9 supertypes HLA-DR, the 6 supertypes HLA-DR
- the prediction values are given in IC50 values in nM and as a percentage rank in a set of 1,000,000 random natural peptides.
- Tables 7 and 8 below represent the concentration of competitor peptide (nM) (SEQ ID No. 9 or SEQ ID No. 10) for which 50% of the binding of the reference peptide to HLA-DRB1 molecules and HLADRB3 molecules. , -DRB4, -DRB5 and HLA-DP4, is inhibited (IC50).
- Table 8 illustrates the set of IC50 values obtained for the two peptides tested and their reference peptide as internal control, for binding to the HLA-DRB3, -DRB4 and -DRB5 molecules. and the HLA-DP401 and -DP402 molecules.
- Table 9 illustrates the relative activity of the two peptide compounds SEQ ID No. 9 and 10 for the HLA-DR, HLA-DRB and HLA-DP4 molecules studied.
- the relative activity is defined by the ratio obtained between the average IC50 calculated with the competitor peptide and the average IC50 calculated with the reference peptide.
- the relative activity makes it possible to compare the properties of binding of the tested peptide to that of the reference peptide which corresponds to the peptide which most effectively binds a given HLA molecule.
- a relative activity of 2 means that the tested peptide binds 2 times less efficiently the studied HLA molecule than the reference peptide.
- the lower the ratio the better the affinity of the peptide for the HLA molecule under consideration. Therefore, depending on the ratio obtained, the peptide compounds are classified ... according to, three., Categories:
- the two consensus peptide compounds have a good affinity for the HLA-DR4, -DRU, -DR13 and DR15 molecules.
- the peptide compound SEQ ID No. 9 differs from the peptide compound SEQ ID No. 10 by virtue of its high binding affinity for the HLA-DR1, DR7 and DRB5 molecules.
- the peptide compound SEQ ID No. 10 has a good binding affinity to the HLA-DR3 and HLADRB3 molecules, whereas the peptide compound SEQ ID No. 9 is not active on these two HLA molecules.
- these two peptide compounds are potential T epitopes capable of activating CD4 + T lymphocytes because they bind, together, to all of the HLADRB1 molecules predominantly represented in the world population, as well as two HLA-DR secondary molecules out of three (HLA-DRB3 and - DRB5).
- the five selected peptide compounds were selected to ensure the vaccination and therapeutic coverage of the populations most severely affected by the main leishmaniasis species that are the most pathogenic in humans.
- the N-terminus of the peptide compounds can be modified by addition of a fatty acid marker from an N-acylated protein.
- the Applicant has also carried out a study of the conservation and creation of proteasome cleavage sites, making it possible to promote the process of presentation of epitopes by HLA-I molecules.
- This study made it possible to design consensus and optimized HLA class I multi-epitopic sequences, presenting a good process for presenting epitopes and preserving peptide binding scores for HLA molecules.
- the most affine epitopes for the HLA-I molecules have been assembled to construct multi-epitopic peptides, having from 18 to 28 amino acids, with particular regard to the conservation and / or the addition of a spacer, for example the TV spacer present in the sequence SEQ ID No. 11, cleavage sites with the immunoproteasome HLA class I, promoting their presentation to the immune system.
- the results of this study are shown in Figure 5.
- the peptide compounds considered in this study are the HLA class ⁇ .S.EQ multiepitopic peptide compounds. at SEQ_. ID_ . No. 13 and HLA class II multiepitopic peptide compounds SEQ ID Nos. 9 and 10.
- epitope peptide compound B "E-34-P" of SEQ ID No. 14 is also studied here. As indicated in the description, it is a non-native synthetic peptide compound composed of the following 34 amino acid sequence:
- This peptide compound is designated by the expression
- E34Pc when in the form of peptide compound cyclized to Cys9-Cys15.
- the peptide compound studied in the present study is the peptide compound K- (palmitoyl) -E-D-E-H-K-G-K-Y-C-R-
- Peptide compounds were prepared at 1M in 10% DMSO / PBS IX solution (without Mg / Ca) with vials containing 1mg of each peptide compound.
- Tables 10, 11 and 12 represent the results of the physicochemical studies of the various peptide compounds mentioned above.
- Table 10 Molecular weights and equivalence to 1 mM (mmol / L) of peptide compounds retained.
- the peptide compounds SEQ ID Nos. 9 to 13 of the invention are mixed with the non-native synthetic peptide compound E34Pc, SEQ ID No. 14, which makes it possible to distinguish in an endemic zone a vaccinated host from an unvaccinated host but infected.
- This peptide compound E34Pc is associated with an adjuvant preferably inducing a cell-mediated response such as, for example, QA21, saponin, Quil-A or any other derivative thereof known to a person skilled in the art, such as than the QS-21.
- the peptide sequences are associated in a ratio SEQ ID NO: 9 / SEQ ID NO: 10 / SEQ ID NO: 11 / SEQ ID NO: 12 / SEQ ID NO: 13 / SEQ ID NO: 14: 20 / 20/20/15/25/10.
- the peptide compounds according to the invention can be rendered immunogenic by binding to carriers or any other derivative (large molecule type KLH, palmitoyl-type lipopeptides or derivatives) and are administered to the candidates in the presence of an adjuvant and preferably to QA21.
- the peptide composition is tested on 38 "Beagle” breed dogs with negative leishmaniasis serology, negative parasitology, absence of Leishmania cell response (INF- ⁇ and granzyme B) and absence of peptide specific IgG2 E34Pc , divided into 10 groups (0 to 9).
- compositions according to the invention with a combination of the three peptide compounds described in patent documents FR2829767 and FR2932802. These are the following three peptide compounds: • ⁇ 16 ⁇ : AARCARLREGYSLTDE
- R16G A-A-S-S-T-P-S-P-G-S-G-C-E-V-D-G;
- E34P E-D-E-H-K-G-K-Y-C-R-L-G-N-D-C-R-T-T-E-P-T-T-T-A-T-P-R-G-T-P-T-P-A-P.
- This combination constitutes the reference group, which is compared to the class I peptide compounds of SEQ ID Nos. 11 to 13, and the class peptide compounds.
- the purpose of the present study is also to evaluate a dose effect of the concentration of the various peptide compounds of the vaccine composition.
- a placebo control group of 2 dogs is provided, this is the 0 group.
- the 9 other groups each comprise 4 dogs receiving the various peptide compounds at the concentrations indicated in Table 13 below.
- the different peptide mixtures are formulated with QA21 adjuvant, Tween 80 and TMS and lyophilized.
- the injection scheme is illustrated in FIG. 6.
- the doses injected are, for their part, described in Table 13 below.
- the values indicated in this table 13 correspond to the quantities of peptides injected in ⁇ g for 200 ⁇ l of composition injected intradermally.
- the groups identified by a star in Table 13 are groups of 4 dogs.
- Peptide compounds denoted "K” are compounds palmitoylated peptides.
- the peptide compound "E34Pc palmitoylated is denoted" KE34Pc ".
- Analyzes are performed before injection and 7 weeks after the 3 rd injection.
- a search is carried out in the sera of the IgG2 antibodies specific for the peptide compound E34Pc.
- These immunoglobulins of IgG2 type of dogs specific for the peptide compound E34Pc are detected by ELISA method according to the microtiter method of Kveider et al. (J. Imol., 1987, 138-299) using an anti-IgG2 conjugate.
- the peptide compound is biotinylated before coating on microplates according to the method described in the patent application FR2932802.
- PBMC peripheral blood mononuclear cells
- peripheral blood mononuclear cells PBMC
- ELISA alternative to radioactivity
- the cytokine IFN ⁇ assay is also performed by an ELISA test in the supernatants of the stimulated cells and makes it possible to determine the ability of the cells to enter a TH-1 pathway after stimulation.
- the efficacy of the vaccine candidates is determined ex vivo by a leishmanicidal activity test.
- the purpose of this test is to evaluate the type and level of intensity of the cell-mediated immune response induced by the administration of a vaccine in dogs, by studying the capacity of macrophages, brought into contact with autologous lymphocytes. to eliminate intracellular parasites of amastigote forms.
- Granzyme B serine protease assay is performed in the supernatants of the stimulated cells in order to evaluate the specific cytotoxic lymphocyte response and to demonstrate the production of Granzyme B specific for cytotoxic T lymphocytes.
- This assay is performed by studying the level of expression of transcripts by RT-q-PCR. Table 14 below gives the results of these various biological tests, and thus lists the number of dogs giving a positive immune response:
- composition acts by stimulation of the Th1 lymphocyte system with production of cytotoxic T lymphocytes and specific IgG2 of the E34Pc peptide compound.
- IgG2 The interest of these IgG2 is not only based on the distinction of the vaccinated dogs / infected dogs but also on their ability to inhibit the proliferation ⁇ - forms-amastigotes or promastigotes of Leishmania.
- the Applicant has therefore developed a new approach which consists of evaluating the capacity of the candidate vaccine antigens - to estimate the peripheral blood T-cells of cured patients or of asymptomatic and immune exposed subjects by measuring ex vivo the production of Th1 and / or Th2 cytokines.
- Groups of individuals have been defined as follows: Naive individuals: no medical history regarding leishmaniasis, no clinical signs, negative cell proliferation, lack of IFNy production after cell stimulation, no evidence for the presence of antibodies against total Leishmania antigens and negative PCR;
- Asymptomatic individuals absence of clinical signs, positive cell proliferation and / or produet-ion - post-stimulation IFN-gamma, cell-cells, total leishmania antigens, positive or negative PCR.
- Table 15 IFN- ⁇ levels secreted by peripheral blood T cells isolated from asymptomatic individuals (asympt) and naive subjects.
- Asympt 1 5000 2712, 9 922.39 68, 48 ND 96.71 132.08 93, 68 61, 35
- Asympt 4 5000 1538, 93,536, 14,135, 29,6812,34, 29,888,352, 35,250, 62,175,03.
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MA38298A MA38298B2 (fr) | 2012-12-28 | 2013-12-30 | Vaccins monovalents et polyvalents contre leishmania |
BR112015015539-1A BR112015015539B1 (pt) | 2012-12-28 | 2013-12-30 | Vacinas monovalentes e polivalentes contra leishmania |
ES13824600T ES2875862T3 (es) | 2012-12-28 | 2013-12-30 | Vacunas monovalentes y polivalentes contra la Leishmania |
EP13824600.4A EP2938355B1 (fr) | 2012-12-28 | 2013-12-30 | Vaccins monovalents et polyvalents contre leishmania |
TNP2015000289A TN2015000289A1 (fr) | 2012-12-28 | 2015-06-19 | Vaccins monovalents et polyvalents contre leishmania |
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FR12/03620 | 2012-12-28 | ||
FR1203620A FR3000402A1 (fr) | 2012-12-28 | 2012-12-28 | Composes peptidiques mono-ou multi-epitopiques destines a la prevention et au traitement des leishmanioses |
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BR (1) | BR112015015539B1 (fr) |
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FR3081870A1 (fr) | 2018-05-30 | 2019-12-06 | Institut De Recherche Pour Le Developpement (Ird) | Epitopes, composes peptidiques mono-ou multiepitopiques et vaccins contre la leishmanie |
WO2021250299A1 (fr) | 2020-06-08 | 2021-12-16 | Universidad Complutense De Madrid | Chimère synthétique multi-épitope utile en tant que vaccin et traitement contre la leishmaniose chez les mammifères |
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WO2009153458A2 (fr) * | 2008-06-19 | 2009-12-23 | Oridan Inc. | Peptide de synthese non natif cyclise et complexe de peptides comprenant ledit peptide cyclise, destine a induire et a caracteriser la prevention ou le traitement d'affections chez les mammiferes |
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2012
- 2012-12-28 FR FR1203620A patent/FR3000402A1/fr active Pending
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2013
- 2013-12-30 EP EP13824600.4A patent/EP2938355B1/fr active Active
- 2013-12-30 MA MA38298A patent/MA38298B2/fr unknown
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- 2013-12-30 WO PCT/FR2013/000373 patent/WO2014102471A1/fr active Application Filing
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WO2009153458A2 (fr) * | 2008-06-19 | 2009-12-23 | Oridan Inc. | Peptide de synthese non natif cyclise et complexe de peptides comprenant ledit peptide cyclise, destine a induire et a caracteriser la prevention ou le traitement d'affections chez les mammiferes |
Non-Patent Citations (1)
Title |
---|
GUERFALI F Z ET AL: "An in silico immunological approach for prediction of CD8+ T cell epitopes of Leishmania major proteins in susceptible BALB/c and resistant C57BL/6 murine models of infection", INFECTION, GENETICS AND EVOLUTION, ELSEVIER, AMSTERDAM, NL, vol. 9, no. 3, 1 May 2009 (2009-05-01), pages 344 - 350, XP026145334, ISSN: 1567-1348, [retrieved on 20080304], DOI: 10.1016/J.MEEGID.2008.02.011 * |
Cited By (4)
Publication number | Priority date | Publication date | Assignee | Title |
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FR3081870A1 (fr) | 2018-05-30 | 2019-12-06 | Institut De Recherche Pour Le Developpement (Ird) | Epitopes, composes peptidiques mono-ou multiepitopiques et vaccins contre la leishmanie |
WO2019243018A1 (fr) | 2018-05-30 | 2019-12-26 | Institut De Recherche Pour Le Développement | Composes peptidiques multiepitopiques et vaccins contre la leishmaniose |
US11559575B2 (en) | 2018-05-30 | 2023-01-24 | Institut De Recherche Pour Le Developpement | Multi-epitopic peptide compounds and vaccines against leishmaniasis |
WO2021250299A1 (fr) | 2020-06-08 | 2021-12-16 | Universidad Complutense De Madrid | Chimère synthétique multi-épitope utile en tant que vaccin et traitement contre la leishmaniose chez les mammifères |
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EP2938355B1 (fr) | 2021-03-10 |
BR112015015539B1 (pt) | 2023-12-19 |
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EP2938355A1 (fr) | 2015-11-04 |
ES2875862T3 (es) | 2021-11-11 |
TN2015000289A1 (fr) | 2016-10-03 |
MA38298B2 (fr) | 2020-11-30 |
BR112015015539A2 (pt) | 2021-04-13 |
MA38298A1 (fr) | 2018-07-31 |
FR3000402A1 (fr) | 2014-07-04 |
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