WO2013000279A1 - Gene-auto-excision binary carrier for controlling biosafety of transgenic plant by sexual reproduction - Google Patents

Gene-auto-excision binary carrier for controlling biosafety of transgenic plant by sexual reproduction Download PDF

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WO2013000279A1
WO2013000279A1 PCT/CN2012/000892 CN2012000892W WO2013000279A1 WO 2013000279 A1 WO2013000279 A1 WO 2013000279A1 CN 2012000892 W CN2012000892 W CN 2012000892W WO 2013000279 A1 WO2013000279 A1 WO 2013000279A1
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gene
plant
recombinase
promoter
activator
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PCT/CN2012/000892
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French (fr)
Chinese (zh)
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裴炎
邹修平
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西南大学
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8216Methods for controlling, regulating or enhancing expression of transgenes in plant cells
    • C12N15/822Reducing position variability, e.g. by the use of scaffold attachment region/matrix attachment region (SAR/MAR); Use of SAR/MAR to regulate gene expression

Definitions

  • the present invention relates to the field of plant genetic engineering, and in particular to methods and systems for the safety control of transgenic plants.
  • Another strategy is to use currently uncontroversial biosafety marker genes such as the green fluorescent protein gene (GFP), the ribitol operon (NL), and the 6-mannose mannose isomerase gene (PMI). This strategy does not address the potential biosafety risks of the target gene (such as disease resistance genes) and promoters.
  • Another strategy is to remove biochemical means from the genome of the transgenic plant after the marker gene such as antibiotics completes its function, thereby eliminating the potential biosafety hazards caused by the transgene.
  • Biotechnology for the removal of foreign genes such as antibiotics is usually considered in two ways: On the one hand, in order to prevent ecological problems caused by transgenic escape, pollen and seed infertility technology, "terminator” technology, chloroplast transgenic technology, etc. have been developed to eliminate The spread of foreign genes through pollen or seeds. On the other hand, it is about the safety of genetically modified foods.
  • the related technologies include: transposon technology, co-transformation technology, and antibiotic-free screening marker gene transformation technology.
  • site-specific recombinase system derived from microorganisms is also a good tool for deleting foreign genes.
  • site-specific recombinase systems that have been widely used on plants include: 1. Cre//o cadaveric system derived from bacteriophage PI ⁇ Bacteriophage PI); 2. From yeast Saccharomyces cerevisiae) 2 ⁇ plasmid FLP/Fi?r system; raMxif pSRl plasmid R/3 ⁇ 4.
  • the gene deletion technology based on the site-specific recombinase system CxdloxP and has been widely used in biosafety control of transgenic plants in recent years due to its advantages of simple operation and high deletion efficiency.
  • These systems work in a simple manner, and the components that complete the recombination reaction only need to be: a recombinase and a recognition site. 0
  • Trans-acting deletes foreign genes. It is mainly used for the deletion of marker genes.
  • the basic strategy is to construct two plant expression vectors, one of which contains a pair of homologous recognition sites, a marker gene and a gene of interest, and the marker gene is placed between the same recognition sites.
  • Another vector contains a recombinase gene expression element controlled by a constitutive promoter such as CaU5S.
  • the deletion of the marker gene can be carried out in two ways: First, the constitutively expressed recombinant enzyme gene is introduced into the transgenic plant by secondary transformation, and the marker gene located between the recognition sites is deleted.
  • Plants with marker-free genes obtained by secondary transformation or hybridization pathways need to be genetically separated by sexual generation to remove the recombinase gene, which is cumbersome and time-consuming, and cannot be used for marker genes in asexually propagated plants. Deleted.
  • 35S promoter control Cre recombinase overexpression often leads to plant phenotypic abnormalities such as plant growth retardation and leaf yellowing (Coppoolse et al., 2003). Therefore, as a modification of the first method, the recombinase gene, the recognition site sequence and the foreign gene are placed on the same expression vector, and all the foreign genes are located between the recognition sites except the target gene.
  • the expression of the recombinase gene is controlled by an inducible promoter or a tissue-specific promoter, and all foreign genes (including marker genes) other than the gene of interest can be deleted at any stage or at any stage of growth of the transgenic plant.
  • the inducible promoter-controlled recombinase deletion technique has the advantage of controlling the deletion of the foreign gene, that is, when we need to delete, the recombinant enzyme can be artificially induced to delete the foreign gene, and the recombinase gene can be silenced when it is not needed.
  • the recombinant enzyme deletion technology controlled by tissue-specific promoters has been widely studied and applied due to its simple operation and high deletion efficiency (Gidoni et al., 2008).
  • Keenan et al. proposed a technical idea for producing non-GM foods from genetically modified plants (Keenan and
  • tissue-specific promoters such as seeds, pollen, and fruits are used to control the expression of recombinase, seeds, pollen, and fruits without any foreign genes can be produced from transgenic plants to solve the transgenic passage. Ecological safety issues caused by pollen and seeds, and food safety issues of genetically modified foods.
  • the system consists essentially of a pair of homozygous fusion recognition sites/ ⁇ - ⁇ and a recombinase gene FLP controlled by a tissue (eg pollen or seed) specific promoter. Among them, all foreign genes are placed between the / ⁇ - ⁇ recognition site sequences.
  • tissue eg pollen or seed
  • GM-gene-deletor deletion system has achieved very high deletion efficiency (100%) in transgenic tobacco, and the complete deletion of all foreign genes has been achieved, the system can only be applied to asexual reproduction.
  • transgenic plants This is because once the foreign gene is introduced into the plant genome by using this technology, the deletion of the foreign gene is automatically and procedurally carried out along with the developmental process of the plant, resulting in the foreign gene being completely replaced in the transgenic plant To pollen or seed. resection. Therefore, in the progeny of transgenic plants, there will no longer be genes for exogenous purposes such as improving plant resistance and improving crop quality.
  • the excellent genes introduced through the "GM-gene-deletor” technology cannot be passed on to the offspring through sexual reproduction, and the farmers cannot enjoy the benefits brought by the genetic modification.
  • Major crops such as corn, rice, wheat and canola are cultivated in the form of sexual reproduction. Therefore, if the "GM-gene-ddetor" system can be applied to plants that are sexually propagated, its importance is self-evident.
  • a trans-transcriptional activator such as the yeast transcription factor GAL4
  • GAL4 is structurally modular and is often composed of two or more structurally separate, functionally independent domains, among which DNA A binding domain (DNA-BD) and an activation domain (DNA-AD). These two binding domains still function separately when they are separated, but they cannot activate transcription. Only when the separated two are spatially close by appropriate pathways can the full GAL4 transcription factor be re-presented and activated.
  • the downstream promoter of the upstream activating sequence allows transcription of genes downstream of the promoter. Moreover, the DNA binding domain and the transcriptional activation domain of different transcription factors are combined to form a hybrid protein, and the protein can still be corresponding
  • the cis-acting element binds to activate transcription of the downstream gene. This cis-reaction is specific, that is, the specific Target promoter only responds to the corresponding DNA binding domain (DNA-BD). Obviously, the expression of the gene controlled by the target promoter and its expression pattern are affected. The regulation of transcriptional activator is controlled and consistent with the expression pattern of the latter, and in the absence of the corresponding transcriptional activator, the downstream gene controlled by the target promoter will remain silent.
  • the transactivation principle of transcriptional activation system to activate the target gene by sexual hybridization coincides with the characteristics of sexual reproduction plants, that is, the green activation system can be used as a molecular switch to control the recombinase deletion system and maintain the foreign gene.
  • the present invention provides an effective control of sexually reproducing plant genetically modified organisms.
  • Safe Gene Automatic Deletion Binary System GENEBS
  • the system uses the green-activated system as a molecular switch to control the expression of the recombinase deletion system.
  • the recombinase gene located between the recombinase recognition sites is silenced in the sexual generation of plants, achieving "GM-gene- The deletor "technology-introduced foreign gene is stably inherited in the sexual generation of plants; on the other hand, by means of hybridization, the two interacting elements of the transcriptional activation system are brought together to exhibit transcriptional activator activity while utilizing plants
  • the tissue-specific promoter initiates the expression of the recombinase gene to realize the deletion of the foreign gene, and solves the biosafety potential problem that the foreign gene may bring.
  • the present invention it is an object of the present invention to provide an automatic deletion binary system for the safe control of exogenous gene organisms for sexually reproducing plants, which automatically deletes the binary system by constructing two plant expressions.
  • the vectors referred to as the first plant expression vector and the second plant expression vector, respectively, are used to control the safety of the exogenous gene organism of the sexually propagated plant.
  • the plant expression vector comprises the necessary elements and a plasmid vector carrying the elements, and the element for constructing the first plant expression vector is called an effector element, hereinafter referred to as an Effector element, for constructing a second plant expression vector element called activation Subcomponents, hereinafter referred to as Activator components.
  • the Effector element comprises two homologous recombinase specific recognition sites; and the following genes or nucleotides are inserted between the two same recombinase specific recognition sites: Controlling the expression of the foreign gene a promoter, a multiple cloning site for introducing a foreign gene, a recombinase gene, and a target promoter that maintains the recombinase gene silencing (the target promoted Activator element includes two homologous recombinase-specific recognition sites; Inserting the following genes or nucleotides between the two recombinant alcohol-specific recognition sites: a promoter for controlling expression of a foreign gene, a multiple cloning site for introducing a foreign gene, and controlling initiation of a transcriptional activator gene And a transcriptional activator gene that cooperates with a target promoter in the Effector element.
  • the first plant expression vector and the second plant expression vector are constructed by operably inserting the above effector element/activator element into the plasmid vector, by the first plant An expression vector and a second plant expression vector, respectively introducing the Effector element and the Activator element into the plant genome, when carrying the Effector When the element and the plant of the Activator element hybridize as a parent, the target promoter in the Effector element will
  • the transcriptional activator gene in the Activator element combines to activate the activity of the transcriptional activator and activate the promoter activity of the transcriptional activator gene to express the recombinase gene, enabling all exogenous sources including the recombinase gene.
  • the deletion of genes achieves the goal of controlling the safety of exogenous genetic organisms in sexually reproducing plants.
  • the recombinase deletion system in the automatic deletion binary system for the safety control of sexually reproducing plant transgenic organisms in the present invention may be a natural recombinase system isolated and cloned from animals, plants or microorganisms, or It is an artificially engineered, designed synthetic recombinase system; preferably a CrdloxP system derived from the bacteriophage PI ⁇ Bacteriophage PI ) and a Cre int / xP system, or a system derived from the yeast Saccha yces cerev / w'ae ) 2 plasmid.
  • the recombinant enzyme is preferably a sequence specific recognition site / ⁇ , lox2272, tec5 7 ⁇ ⁇ recognition sites and the recombinase gene is selected from FLP, Cre and Cn? '"''Gene.
  • cre'" t group Since the artificially engineered recombinase gene containing a plant-derived intron has a nucleotide sequence as shown in SEQ ID No. 11, wherein the plant-derived intron is pCAMBIA 1305.1 (GenBank accession number: AF354045.1) The intron of the GUS gene on the vector is catalase intron.
  • the promoter for controlling the transcription activator gene in the present invention may be a natural promoter isolated and cloned from an animal, a plant or a microorganism, or may be a artificially engineered or designed synthetic promoter; A sub- or tissue-specific promoter, in particular the cauliflower mosaic virus (CaMV) 35S promoter (Ca 5S).
  • CaMV cauliflower mosaic virus
  • the transcriptional activation system of the present invention may be a natural transcriptional activation system obtained by isolation and cloning in an animal or a microorganism, or an artificially modified, designed and synthesized transcriptional activation system, preferably tTA/TOP10/pTAX, Gal4: VP16/UAS, mGal4: Artificially designed transcriptional activation system such as VP16 UAS or pOp/LhG4.
  • the target promoter is ⁇
  • the transcriptional activator gene associated therewith is ⁇ G ra , which is an improved version of the transcriptional activator gene AC ⁇ with codons having Arabidopsis codon preference.
  • a plant expression vector comprising the above Effector element and an Activator element, namely a first plant expression vector and a second plant expression vector, hereinafter referred to as an Effector plant expression vector and an Activator plant expression vector, respectively.
  • the Effectsor plant expression vector comprises two homologous recombinase specific recognition sites; and the following genes or nucleotides are inserted between the two same recombinase specific recognition sites: controlling the expression of the foreign gene a promoter, a multiple cloning site for introducing a foreign gene, a recombinase gene, and a target promoter that maintains the recombinase gene silencing.
  • the Activator plant expression vector comprises two homologous recombinase specific recognition sites; the following genes or nucleotides are inserted between the two recombinase specific recognition sites: a promoter for controlling expression of a foreign gene a multiple cloning site for introducing a foreign gene, a promoter for controlling a transcriptional activator gene, and a transcriptional activator gene that cooperates with a target promoter in an Fcector element.
  • another object of the present invention is to provide the use of the above-described automatic gene deletion binary system for preparing a safe transgenic plant.
  • the target promoter in the Effector element will bind to the transcriptional activator gene in the Activator element, exhibit transcriptional activator activity and activate transcriptional activator
  • the promoter activity of the gene enables expression of the recombinase gene, and the deletion of all exogenous genes including the recombinase gene is achieved, thereby achieving the purpose of controlling the safety of the exogenous gene of the sexually propagated plant.
  • Still another aspect of the present invention provides a method for preparing a safe transgenic plant, firstly constructing an Effector element and an Activator element for automatically deleting a binary system, and inserting a foreign gene to be introduced into a plant genome into an Effector element and/or In the multiple cloning site of the Activator element, the obtained Effector plant expression vector and Activator plant expression vector are respectively transformed into the host plant to obtain the first gene plant and the second transgenic plant, respectively, which are respectively referred to as the Effectsor transgenic plant and the Activator transgene.
  • the present invention is directed to the defect that the gene deletion technology such as "GM-gene-deletor” cannot maintain the stable inheritance of the foreign gene in the sexual generation of the plant, and creatively proposes the use of a transcription activation system (transactivation system) through extensive research and analysis and preliminary experiments.
  • a transcription activation system transactivation system
  • a new gene automatic deletion binary system GAEBS was constructed. According to the working principle of GAEBS, based on a large number of screening transcriptional activation systems and recombinase systems, the pOp/LhG4 transcriptional activation system and the Cre/loxp recombinase system were used to construct the GAEBS system.
  • the Activator component and the Effector component in the GAEBS system can be transferred.
  • the expression vector is constructed into a vector commonly used in the field and then transferred into the plant genome.
  • a multiple cloning site sequence for insertion of a foreign functional gene is provided in both the Activator element and the Effector element, and any exogenous functional gene can be inserted therein for genetic improvement of plant genetic engineering.
  • the experimental results of the transgenic tobacco in the present invention indicate that the sexual hybridization of the Effectsor transgenic plant and the Activator transgenic plant can efficiently and efficiently all the foreign parents derived from the automatic deletion system of the plant tissue-specific promoter CaMV 35S.
  • the source gene is completely removed from the specific tissues or parts of the hybrid progeny, and the deletion efficiency reaches 100%. Therefore, the present invention successfully constructs the gene automatic deletion binary system GAEBS and the plant expression vector comprising the same, and the system successfully solves the technical problem that the prior art cannot solve the stable inheritance of the foreign gene in the sexual reproduction generation, that is, maintains the technical problem.
  • the recombinase gene located between the recombinase recognition site sequences is silenced in the sexual generation of plants, and the foreign genes introduced by the "GM-gene-deletor" technology are stably inherited in the sexual generation of plants;
  • the sexual promoter initiates the expression of the recombinase in a specific tissue or site to delete the foreign gene, and solves the biosafety problem that the foreign gene may bring, and has obvious beneficial effects.
  • FIG. 1 is a schematic diagram showing the structure of a cloning vector pUC-CaMV 35S-GFP-nos carrying a CaMV 35S-GFP-nos element, wherein CaMV35S and 35S are plant tissue-specific promoters derived from cauliflower mosaic virus; m GF er (this The invention is abbreviated as "GFP" as a green fluorescent protein gene; it is a transcription termination sequence of the stalk synthase gene. It is an ampicillin resistance gene for screening of positive clones.
  • GFP green fluorescent protein gene
  • Figure 2 is a schematic diagram showing the structure of a cloning vector pUC-35S-bar-nos carrying a 35S-bar-nos element.
  • bar is a phosphinthricin acetyltransferase (PAT) gene.
  • PAT phosphinthricin acetyltransferase
  • Figure 3 is a schematic diagram showing the structure of a cloning vector pBS-spacer containing a Spacer sequence.
  • the Spacer fragment is a non-functional fragment of approximately 2.4 kb in length from the pCAMBIA4956:ET15 vector.
  • Figure 4 is a flow chart showing the construction of the binary expression vector ⁇ carrying the loxp-CaMV35S:GFP-MCS-35S:bar-loxp element.
  • is a kanamycin resistance gene
  • is a neomycin phosphotransferase gene
  • LB is a T-DNA left border
  • RB is a T-DNA right border
  • / w ⁇ is a cre//oxp recombinase system Identify the sequence of sites.
  • pBIN 19 is a backbone vector for construction of plant expression vectors.
  • Figure 5 is a flow chart showing the construction of the binary expression vector plox2272GMNlox2272 containing the lox2272-CaMV35S:GFP-MCS-35S:bar-lox2272 element.
  • Loxp2272 is a mutant recognition site sequence of ⁇ sequence; nosP is a promoter of the opine synthase gene.
  • Figure 6 is a flow chart showing the construction of the binary vector pZ ⁇ GN-MCS containing loxp-CaMV35S:GUS:NPTII-MCS-loxp.
  • Amp-r is an ampicillin resistance gene.
  • Figure 7 is a flow chart showing the construction of the Effectsor plant expression vector pLOCB containing the pOp:cre' m element.
  • T3A is the polyA sequence of the pea ribulose-1,5-bisphosphate carboxylase small subunit rbcS-3A gene; ⁇ ⁇ is the ampicillin resistance gene.
  • Figure 8 is a flow chart showing the construction of the Effectsor plant expression vector pL22720CN containing the pOp:cre' m element.
  • Figure 9 is a flow diagram showing the construction of the Activator plant expression vector pL35SLhG4 containing the 35S:LhG4 ATO element.
  • Figure 10 is a test diagram of the Effector transgenic tobacco plants.
  • a and B are fluorescence detection maps of GF gene expression in different tissues of transgenic plants.
  • A is the expression of GFT gene in transgenic leaves;
  • B is the expression of GFP gene in transgenic roots.
  • CK is a wild-type regenerated plant tissue.
  • C is the PCR validation result for partial pLOCB transgenic tobacco.
  • the P lane is the pLOCB plasmid as a template;
  • the 1 -10 lane is the DNA of the pLOCB GFP + positive plant as a template.
  • D is the PCR verification of pL22720CN transgenic tobacco.
  • the 11-20 lanes were DNA of pL22720CN GFP+ positive plants.
  • the M lane is a DNA molecule marker; the H lane is H 2 0 as a template; and the WT is a DNA of a non-transgenic regenerated plant as a template.
  • Figure 11 is a graph showing the acquisition of Activator transgenic tobacco plants.
  • a and B are histochemical staining analysis of gene expression in different tissues of transgenic plants.
  • A is the result of GUS histochemical staining in transgenic roots, stems and leaves;
  • B is the result of GUS histochemical staining of roots, stems and leaves of non-transgenic plants.
  • C is a PCR verification result graph of pL35SLhG4 transgenic tobacco.
  • M lane is a DNA molecule marker
  • WT is a DNA of a non-transgenic regenerated plant as a template.
  • the P lane is the pL35SLhG4 plasmid as a template;
  • the lanes 1-9 are the DNA of the pL35SLhG4 GUS+ positive plant as a template.
  • Figure 12 is a graph showing the efficiency of deletion of foreign genes in the hybrid progeny of the same pL35SLhG4 plant and different pLOCB plants by the GAEBS system.
  • Figure 13 is a graph showing the efficiency of deletion of foreign genes in the hybrid progeny of the same pLOCB plant and different pL35SLhG4 plants by the GAEBS system.
  • average deletion efficiency (%) (efficiency of deletion gene + efficiency of deletion of Gi/S gene) /2.
  • Figure 14 is a graph showing the efficiency of deletion of exogenous genes in the hybrid progeny of the pL22720CN plant and the pL35SLhG4 plant by the GAEBS system.
  • Figure 15 is a graph showing the statistical results of the efficiency of deleting the exogenous gene by the automatic deletion of the binary system by different genes.
  • Figure 16 is a PCR analysis of the residual fragments of the system after deletion of the foreign gene in the progeny of the transgenic plants.
  • M is a DNA molecular marker
  • G71 15 is a 2272-1 l x35S-5 hybrid genomic DNA as a template
  • ⁇ 7413 is a L 174X35S-13 hybrid F, and the genomic DNA is used as a template
  • f413 is a 35S-4xL13 hybrid F, the genomic DNA is used as a template
  • L13 is the genomic DNA of the L13 transgenic plant as a template
  • ⁇ 95 is the L79x35S-5 hybrid genomic DNA as a template
  • fl 316 is the L131 > 35S-6 hybrid genomic DNA as a template
  • 987 is a L198 genomic DNA hybridized with L198x35S-7 as a template
  • 35S-4 is a parental genomic DNA of a 35S-4 transgenic plant as a template.
  • Primers for amplification are shown in SEQ ID N0.36 and SEQ ID NO. If the foreign gene is deleted, a specific band of about 800 bp will be amplified, otherwise a band of about 7.3 kb or / and 9.1 kb will be amplified.
  • Figure 17 is a PCR analysis diagram of deletion of a foreign gene in a progeny of a transgenic plant.
  • the M lane is the DNA molecule marker.
  • the 2272-1 1 lane uses the 2272-1 1 maternal genome as a template; the ⁇ 7115 lane uses 2272-11 X35S-5 hybrid F, and the genomic DNA is used as a template; the 35S-5 lane uses the 35S-5 paternal genome as a template.
  • the L79 lane uses the L79 maternal genome as a template; f795 is a hybrid of L79x35S-5! The generation of genomic DNA is a template; the 35S-5 lane is a template of the 35S-5 paternal genome.
  • the L131 lane uses the L131 maternal genome as a template; the ⁇ 316 lane uses the L131 x35S-6 hybrid genomic DNA as a template; and the 35S-6 lane uses the 35S-6 paternal genome as a template.
  • the L198 lane uses the L198 maternal genome as a template; the fl 987 lane uses the L198x35S-7 hybrid generation genomic DNA as a template; and the 35S-7 lane uses the 35S-4 paternal genomic DNA as a template.
  • the primer sequences used to amplify the maternal genome are shown in SEQ ID NO. 40 and SEQ ID NO. 41, and the target fragment is the cre int recombinase gene.
  • the primer sequences used for amplification of the paternal genome are shown in SEQ ID N0.42 and SEQ ID NO. 43, and the target fragment is the LhG4 ATO transcriptional activator gene.
  • the primers used to amplify the hybrid progeny genome are the above two pairs of primers. It can be seen from the figure that the presence of the parental cre int recombinase gene and the parental LhG4 ATO transcriptional activator gene was not detected in the progeny of the hybrid.
  • Figure 18 is a graph showing the results of sequencing of residual T-DNA fragments in the hybridization of pL22720CN and pL35SLhG4 parents. The about 0.8 kb residual fragment amplified in Figure 16 was subjected to sequencing analysis.
  • Re-use phenol (Ph8.0): chloroform: isoamyl alcohol (25:24:1) and chloroform: isoamyl alcohol (24:1) for each extraction (10,000 r / min, centrifugation for 10 min), take Clear, 2.5 times the volume of absolute ethanol precipitated at -20 Torr for more than 30 min.
  • the pellet was collected at 13,000 r/min, centrifuged for 10 min, the supernatant was discarded, and the pellet was rinsed with 75% ethanol. After centrifugation under reduced pressure, the precipitate was finally dissolved in 50-200 ⁇ L of TE and stored at -20 °C until use.
  • the amplification procedure was: 94 ° C, 5 min; 94 ° C, 30 sec, 56 ° C, 30 sec, 72 ° C, l ⁇ 4 min, 35 cycles; 2 ° C extension for 10 min.
  • the establishment of the restriction enzyme system and the reaction conditions were carried out in accordance with the instructions of the Roche restriction endonuclease kit.
  • the recovered fragment, or the amplified fragment obtained by amplification was cloned into pUCm-T (Shanghai Sarigon) or pGEM-T/pGEM-T Easy (Promega) vector according to the ligase kit instructions.
  • the reaction system is as follows:
  • the molar ratio of the vector DNA fragment to the exogenous ligation product DNA fragment was 1:1.
  • a pair of primers (shown as SEQ ID NO. 1 and SEQ ID NO. 2) were designed based on the pH-pOp(A) (Moore et al., 2006) plasmid on the O promoter sequence, and the 5' end was amplified by PCR. And the ⁇ promoter containing the H «dIII and Xbal endonuclease recognition site sequences at the 3' end, respectively, and T was cloned into the pGEM-T-easy vector to obtain the pGEM-t-pOp vector. Sequencing confirmed.
  • pBIN-LR-LhGR 2 (Craft et al., 2005; Samalova et al., 2005), a pair of primers (as shown in SEQ ID N0.3 and SEQ ID NO. 4) were designed on the plasmid (?).
  • the intron (catalase intron) derived from the gene on the pCAMBIAl 305.1 vector (GenBank accession number: AF354045.1) was inserted into the ere recombinase gene encoding Glnl44/Vall45 acid according to the conserved sequence of the intron boundary in the plant genome. Between the codons of the residues. For this, primer pairs c-5F/c-5R (as shown in SEQ ID N0.5 and SEQ ID NO. 6), c-3F/c-3R (such as SEQ ID NO. 7 and SEQ ID NO. 8) and int-L/int-R (as shown in SEQ ID NO. 9 and SEQ ID NO.
  • the Cre recombinase gene containing the catalase intron intron between bases 432 and 433 was obtained and designated cre in ' as shown in SEQ ID NO. 3.
  • Construction of binary expression vector p/oxpGMB/ox carrying loxp-CaMV35S:GFP-MCS-35S:bar-loxp First, a CaMV35S-GFP-nos expression element containing a GFP reporter gene was constructed.
  • a pair of primers shown as SEQ ID N0.12 and SEQ ID NO.
  • the Bamlll and Nhe ⁇ enzyme recognition sites were added to the 5' ends of the two primers; and the sequence of Deutsch bp downstream of the GFP gene (including the GFP termination sequence) was designed, and the primer nos-up/nos-down was designed (such as SEQ ID). NO. 16 and SEQ ID NO. 17), and a Spel enzyme recognition site was introduced at the 5' end of the former.
  • the above target fragment was PCR-amplified, and T-cloning was applied to pUCm-T (Shanghai Shenggong Biotechnology Co., Ltd.) vector to obtain pUCm-T-CaMV35S, pUCm-T-GFP and pUCm-T-nos intermediate vectors, respectively. Sequencing confirmed.
  • GFP was excised from pUCm-T-GFP using BamHVNhel, and S/7eI/H/wiin was excised from pUCm-T-nos, both of which were digested with 3 ⁇ 4/II/H/mim.
  • the pUCm-T-CaMV35S vector was ligated to obtain pUC-CaMV35S-GFP-nos, which contained the CaMV35S-GFP-nos expression element (as shown in Figure 1). spare.
  • the 35S-GUS-nos element was excised from pBI 121 (GenBank accession number: AF485783.1) and ligated into the pUCm-T vector which was subjected to the same digestion to obtain pUC-35S-GUS-nos vector. Then, a pair of primers (as shown in SEQ ID NO. 18 and SEQ ID NO. 19) were designed according to the sequence of the herbicide resistance gene bar on the vector pFGC5941 (Genbank accession number: AY31090U), and 5' and 3' were obtained by PCR amplification. The bar genes with Spe ⁇ and d, respectively, were T-cloning onto the pUCm-T vector and confirmed by sequencing.
  • the bar gene was excised from the vector by S/?d/d, and ligated into the pUC-35S-GUS-nos vector treated with Xbal/Sacl enzyme to obtain a pUC-35S-bar-nos vector. Then, the vector was digested with Sacl enzyme, and the sticky ends were filled in, and the vector was cyclized to eliminate the 3 ⁇ 4d endonuclease recognition site between bar and nos (as shown in Fig. 2). spare.
  • a pair of primers (shown as SEQ ID NO. 20 and SEQ ID NO. 21) were designed based on the hxp recognition site sequence and the CaMV35S-GFP-nos element sequence, wherein the 5' end of primer 1 contains a 34 bp long loxp. The 3' end is matched to the 5' end of the CaMV 35S promoter, and the primer 2 is complementary to the 3' end of the nos.
  • the loxp-CaMV35S-GFP-nos element was amplified by PCR using the pUC-CaMV35S-GFP-nos plasmid as a template.
  • a pair of primers (as shown in SEQ ID N0.22 and SEQ ID NO. 23) was used to amplify the loxp-35S-bar-nos element.
  • the recognition site hxp of Cre recombinase was added to the 5' end of both fragments. The above fragment was T-cloning onto the pUCm-T vector and confirmed by sequencing.
  • the loxp-CaMV35S-GFP-nos element was excised from the intermediate vector pUC-loxp-CaMV35S-GFP-nos by SacVKpnl, and ligated into the same enzyme-treated pBIN 19 (Genbank accession number: U09365.1) vector to obtain pLoxp. - GFP intermediate vector. Then, the hol/Xbal enzyme will take the loxp-35S-bar-nos component from The pUC-loxp-35S-bar-nos vector was excised and ligated with the SaWNhel digested pLoxp-GFP vector to generate the p ocpGBZrap intermediate vector.
  • a pair of primers (shown as SEQ ID N0.24 and SEQ ID NO. 25) were designed based on the ⁇ 2272 recognition site sequence and the CaMV35S-GFP-nos element sequence, pUC-CaMV35S-GFP-nos plasmid was used as a template, PCR The lox2272-CaMV35S-GFP-nos element was amplified. Similarly, the IBIN2272-nosP-NPTII-nos element was amplified using a pair of primers (shown as SEQ ID NO. 26 and SEQ ID NO. 27) using the pBIN 19 plant expression vector as a template.
  • the recognition site sequence of Cre Recombinase 10x2272 was added to the 5' end of both fragments. The above fragment was T-donated onto the pUCm-T vector and confirmed by sequencing.
  • the pUC-lox2272 (-nosP-NPTII-nos vector was digested with Xhol/Xbal, and the lox2272-nosP-NPTII-nos fragment was recovered and ligated with the Savon Nhe ⁇ treated pBIN 19 vector to obtain the plox2272-NPTII intermediate vector. Then, Sacl/Xbal The vector was recovered by restriction enzyme digestion.
  • the three fragments were ligated to obtain the plant expression vector p/o 2272GMN/o 2272.
  • all exogenous gene fragments including the multiple cloning site MCS were located between the ⁇ 22 ⁇ 2 recognition site sequences (as shown in Figure 5). .
  • the pBIN 19 plasmid was used as a template to PCR-amplify the nos-loxp element.
  • the loxp recognition site sequence was added to the 3' end of the nos sequence.
  • Sequencing confirmed. Sad/EcoRI digestion pGEM-t-
  • the nos-loxp intermediate vector, the nos-loxp element was recovered and ligated into the pBIN19 vector treated with the same enzyme to produce the pBIN-loxp-nos intermediate vector.
  • the GUS:NPTII-nos element was extracted from pSackiss-35S-GUS with BamHVSan enzyme.
  • NPTII-nos vector was ligated and ligated with pGEM small loxp-35S vector treated with 3 ⁇ 4/ ⁇ 3 ⁇ 4/ ⁇ enzyme to obtain pUC-loxp-35S-GUS: NPTn-nos cloning vector.
  • HiVjdlll/zd enzyme was used.
  • the vector was digested, and the loxp-35S-GUS:NPTII-nos fragment was recovered and ligated with the same enzyme-treated pBIN-loxp-nos vector to obtain a p/ ⁇ xpGN-MCS vector.
  • GUS, ⁇ and The cloning loci MCS are located between a pair of co-directional recognition locus sequences ( Figure 6)).
  • the pOp-cre int- T3A expression element was first constructed.
  • a pair of primers (shown as SEQ ID N0.32 and SEQ ID NO. 33) were amplified from the pER8 vector to obtain the terminator sequence T3A, which introduced the JiTwI endonuclease recognition site at the 5' end, T-cloning to pUCm- On the T vector, a pUC-T-T3A vector was produced. Sequencing confirmed.
  • Sacl/Xbal cuts the ⁇ promoter from the pGEM-T-pOp vector, and the ⁇ 3 ⁇ termination sequence is excised from the pUC ⁇ 3 A vector, and XbaVSdl cre mt gene from pUC-T-Cre
  • the int vector was excised and the three fragments were ligated into the SacVBglll-digested pUC vector to obtain a P UC-pOp-Cre int -T3A vector containing the pOp-Cre int -T3A expression element.
  • the pOp-Cre int -T3A expression elements were excised with Hi"dll leg ol and ligated into the HindUl/Xhol digested p xpGMB!oxp and p/ox2272GMN/ox2272 plant expression vectors, respectively, to generate the corresponding Effector plants.
  • the expression vectors pLOCB and pL22720CN (Fig. 7, 8).
  • the LhG4 ATO- T3A element was constructed, and the ZJJG ⁇ gene was excised from the pUCm-t-LhG4 ATO vector by wHIA3 ⁇ 4/I.
  • XhoVKpnl used the T3A (pea 3A) transcription termination sequence from the pER8 vector (Genbank accession number: AF309825.2)
  • the upper cut was ligated into the amHI/ /wI enzyme-treated pBS vector to obtain pBS-LhG4 ATO- T3A, which contained the LhG4 ATO- T3A element.
  • the element was excised with Kpnl/Baml, San/B imHl was cleaved from the pSackiss-35S-mcs-nos vector, and the 35S promoter was ligated, and the J55 "promoter and LhG4 ATO- T3A elements were ligated together with the SaWKpnl enzyme.
  • a pL35SLhG4 plant expression vector shown in Figure 9) was obtained.
  • the constructed plant expression vector plasmid was introduced into Agrobacterium EHA105 by electroporation.
  • the above vector was introduced into Agrobacterium EHA105 by electroporation using the Bio-RAD MicroPulser User's Manual.
  • Table 1 Agrobacterium tumefaciens-mediated medium for tobacco genetic transformation
  • MSB MSB (MS inorganic salt + B5 organic)
  • the above expression vector is introduced into tobacco by a method of Agrobacterium-mediated leaf disc.
  • the specific method is as follows:
  • Tobacco seeds were sterilized with 1% sodium hypochlorite and germinated on solid medium MSBc under the conditions of 25 ° C, 16 hr light / 8 hr dark photoperiod. A sterile sterile seedling that grows about one month later can be used as a transformed explant.
  • the leaf discs were subjected to differentiation culture in the screening medium MSB 2 for 2 weeks under the conditions of 25 ° C, 16 hr light / 8 hr dark photoperiod. After the regenerating green callus appeared, transfer to the bud medium MSB 3 to promote bud production. When the resistant seedlings grow to 3-4 cm in length, they are cut into rooting medium MSB 4 to induce rooting. When the roots of the resistant seedlings grow to 2-3 cm long, the medium is washed, and the hydroponic seedlings are 2-3 days, transplanted into nutrient mash, and grown in a greenhouse. The obtained transgenic tobacco was not significantly different in phenotype and growth development from the wild type control.
  • the Effector vector contains the green fluorescent protein GF reporter gene, the expression of GF in the leaves of plants and other tissues was detected by fluorescence stereomicroscope in tobacco regenerated plants screened by PPT (pLOCB) and Km (pL22720CN).
  • GFP green fluorescence identification of transgenic tobacco is described in Haseloff (Haseloff, 1999). The leaves of the resistant seedlings were harvested and the green fluorescence signal of the tobacco (the excitation peak was 488 nm and the emission peak was 520 nm) was observed under an Olympus SZX-ILLB2-200 stereofluorescence imaging system (R) and photographed. As shown in Fig.
  • the green fluorescent signal was detected in both the leaves and roots of the transgenic tobacco, while the control did not detect any green fluorescent signal and only showed the red fluorescent signal of chlorophyll. Among them, the fluorescence of the control plant (CK) root was significantly weakened. Based on the above observations, the effector transgenic plants were screened by the uniform green fluorescent signal of the resistant seedling leaves.
  • the Activator vector contains the Gf/S reporter gene. Therefore, the resistant seedlings were first stained by GUS histochemical staining.
  • GUS tissue staining see the method of Jefferson et al. (1987). The main process is as follows:
  • the transgenic plant material (leaf, stem, root, etc.) was cut into thin slices, placed in a freshly prepared X-Gluc staining solution, and incubated at 37 ° C for 12 h. After sufficient staining, it was destained 2 to 3 times with 75% (v/v) ethanol until the control material (wild type plant) was white. And under the stereoscopic observation and photography. As shown in Fig. 11A, B, the roots, stems and leaves of the transgenic plants showed strong GUS blue, while the non-transgenic plants showed no blue color. Then, PCR was used to further identify the integration of foreign genes in transgenic plants with GUS staining in blue. The results showed that all of the transgenic plants with GUS staining were blue. A specific band of 1.4 kb 35S-LhG4 ATO was detected (shown as C in Figure 11). The primers used are shown in the sequences as SEQ ID N0.36 and SEQ ID NO.
  • the single-cury transgenic plants were screened for hybridization experiments by the method of Example 6.
  • the analysis of the copy number of the Effector transgenic plants mainly detected the isolation of GFP green fluorescence in the self-crossing seedlings, and the single-copy plants of the transgenic pLOCB and pL22720CN were initially identified. It can be seen from Table 2 that most of the transgenic plants are single-copy and double-copy plants, of which 16 are single-copy transgenic plants and 6 are pL22720CN.
  • transgenic pL35SLhG4 tobacco For the transgenic pL35SLhG4 tobacco, GUS tissue staining analysis was performed on the seedlings, and the number of blue (GUS+) and white (GUS-) seedlings was counted. Single-copy plants were identified by analyzing the isolation ratio of the Gt/S gene in the self-crossing TV generation. Table 3 shows that the six transformants analyzed were single copy transgenic plants.
  • Example 8 Hybridization test of transgenic tobacco For the hybridization method, see Liu Renxiang et al. (2000). During the flowering period of tobacco, the anthers to be split on the second day of the afternoon are stored in the laboratory. After the morning of the second day, the anthers have been split, and the field is picked up with a brush. The pollen is applied to the stigma (to the stamen) to be pollinated, and the pollination process is completed.
  • the GAEBS system can simultaneously remove foreign genes derived from both parents from the hybrid progeny.
  • the GFP and GUS activities of the hybrid progeny seedlings were first tested to determine the phenotype of the hybrid progeny seedlings, and the number of seedlings of different phenotypes was counted. Then, according to the Mendelian inheritance law, the efficiency of the gene deletion system to delete the foreign gene through the hybridization pathway is calculated. In the present study, the efficiency of deletion of the Effector and Activator elements was evaluated using the efficiency of deletion of GFT and Gf/reporter genes, respectively. The statistical results are shown in Tables 4 and 5.
  • the 35S-4 and 35S-13 transformants were randomly selected to hybridize with different pLOCB independent transformants, respectively, and the statistical system removed the average efficiency of the foreign genes in these hybrid combinations (the system removed the average of the Efficiency and Activator efficiencies).
  • the efficiency of deleting the foreign gene in the hybrid seed is 23%-100%.
  • the efficiency of systematic deletion of the exogenous gene was between 31% and 100%.
  • the system removed the Effector and Activator exogenous genes in both combinations at an efficiency of 100%.
  • the efficiency of deleting the foreign genes in the hybrid progeny reached 100%.
  • ⁇ , 2 refers to the suitability of GFP-positive seedlings for a 1:1 ratio.
  • ⁇ 2 2 refers to the suitability of GUS-positive seedlings for a ratio of 1:1.
  • Deletion efficiency (%) [(4xG"- 2xT)/T] l00o
  • Deletion efficiency (%) [2xG7T] x l00.
  • G - refers to GFP or GUS negative seedlings
  • T refers The total number of seedlings analyzed.
  • ⁇ , 2 refers to the suitability of GFP-positive seedlings for a 1:1 ratio.
  • ⁇ 2 2 refers to the suitability of GUS-positive seedlings for a ratio of 1:1.
  • the removal efficiency of the system is higher than that of the Activator.
  • the deletion efficiency of the effector containing the mutant recognition site sequence (lox2272) was higher than that of the Activator containing the wild type recognition site (loxp), but there was no significant difference.
  • the efficiency of deletion of the system is reduced.
  • the removal efficiency of Activator was 37% higher, and the difference between the two reached a very significant level (p ⁇ 0.01).
  • the efficiency of deletion of the Activator by the system was significantly improved (p ⁇ 0.05).
  • pLOCBxpL35SLhG4 the average deletion efficiency of the Activator was significantly lower than that of the Effector, a pLOCB transgenic plant with a deletion efficiency of 100%, such as L198, was obtained. No transgenic plants with 100% deletion efficiency were obtained in the 9 pL22720CN transgenic plants analyzed.
  • the system can efficiently delete the Effector and Activator, and the average deletion efficiency is above 73%. Therefore, pLOCBxpL35SLhG4 and pL22720CNxpL35SLhG4 are efficient combinations of gene automatic deletion binary systems.
  • the GFP and GUS activity assays of transgenic progeny of transgenic pLOCB or pL2272 ⁇ CN and pL35SLhG4 tobacco have demonstrated that the GAEBS system can efficiently delete foreign genes derived from both parents, and the deletion efficiency reaches 100%.
  • the genomic DNA of the hybrid progeny and the hybrid parent were extracted and PCR analysis was performed.
  • a pair of primers (designated as SEQ ID N0.38 and SEQ ID N0.39) were designed based on the DNA sequence between the T-DNA both-end boundary sequence of the plant expression vector backbone (pBIN 19) and the recombinase recognition site sequence.
  • the PCR reaction conditions used were: 94 ° C for 5 min; 98 ° C lOsec; 68 ° C for 8 min, 35 cycles.
  • the DNA polymerase is LA Taq (TaKaRa) polymerase. If deletion occurs, a non-functional T-DNA residual fragment of about 800 bp will be detected, otherwise a large T-DNA fragment of about 7.0 kb or / and 9.0 kb will be detected (as shown in A of Figure 16). As can be seen from Fig.
  • a specific large fragment of about 7.0 kb size was amplified using the parental 35S-13 genome as a template, and the fragment includes a Loxp recognition site, 35S-GUS: NPTII-nos, and 35S-LhG4ATO-T3A. Fragment.
  • a large 9.0 kb fragment was amplified using the parental L13 genome as a template, including the loxp recognition site, 35S-GFP-nos, pOp-creint-T3A and 35S-bar-nos fragments.
  • the GAEBS system of the present invention for controlling the safety hazards of foreign genetic organisms can not only effectively maintain the stable inheritance of foreign genes in the sexual reproduction of the parents, but also efficiently extract all foreign genes from the hybrid zygote. Completely deleted, the removal efficiency reaches 100%.
  • the method of the invention is simple and convenient, and can delete 100% of all foreign genes when the foreign gene needs to be deleted, and the effect is remarkable, and has a good application prospect.
  • Cre/lox-mediated marker gene excision in transgenic maize Zea mays L.

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Abstract

Constructed is a new Gene-Auto-Excision Binary System (GAEBS) for controlling the biosafety risk of a plant exogenous gene in sexual reproduction. Mainly using the transcription activating system as a molecular switch to control a recombinase excision system, on one hand, the recombinase gene located between the recombinase recognition sites is maintained silent in the sexual generation of a plant and heredity stability of the exogenous gene introduced by "GM-gene-deletor" technology in the sexual reproduction of the parent plant is realized; and on the other hand, by performing hybridization of parent plants carrying an effector element and an activator element respectively, the effector element and the activator element can be linked to present transcription activating factor activity. At the same time, using a plant tissue specific promoter to promote the expression of the recombinase, tissue specific excision of the exogenous gene is realized and a safe transgenic plant is obtained.

Description

通过有性繁殖控制转基因植物生物安全性的基因自动刪除双元载体  Automatic deletion of binary vectors by genetically controlling the safety of transgenic plants
技术领域 Technical field
本发明涉及植物基因工程领域, 具体地说涉及用于转基因植物安全性控制的方法和系 统。  The present invention relates to the field of plant genetic engineering, and in particular to methods and systems for the safety control of transgenic plants.
背景技术 Background technique
自 1983年第一例转基因烟草诞生以来, 随着基因工程技术的广泛发展, 转基因植物及 其产品大量问世, 在世界范围内掀起了生物技术发展的一个新高潮。 据统计, 到 2009年, 全球转基因作物种植面积达到了 1.34亿公顷。  Since the birth of the first GM tobacco in 1983, with the extensive development of genetic engineering technology, a large number of genetically modified plants and their products have emerged, which has set off a new climax of biotechnology development worldwide. According to statistics, by 2009, the global GM crop planting area reached 134 million hectares.
尽管植物转基因技术已成为了世界上增加粮食产量、 减少环境污染最重要的手段之一。 但是, 该技术从其诞生之初, 人们就争论不断。 相对于传统育种技术, 转基因技术的最大优 势在于突破了物种间的生殖隔离, 在人工条件下, 把目标基因转移到受体植物中, 定向改良 植物的性状, 实现诸如抗虫、 抗旱、 抗病等人类期望的目的, 提高作物产量。 人们可以利用 生物技术将从细菌、 病毒、 动物、 人类、 远缘植物来源的基因甚至人工合成的基因导入植物 基因组中。而这种情况在自然界中几乎不可能发生, 所以人们无法预测基因的这种转移对未 来生态环境和人类的健康会产生什么样的影响。 因此, 世界各国 (尤其是欧洲)对转基因技 术的安全性心存顾虑,担心转基因植物会对生态环境造成破坏甚至会给人类健康带来不利影 响。 随着转基因生物应用的范围不断扩大, 科学界和公众对转基因生物安全性的担忧也日益 增加。 这种担忧已经严重影响到了转基因作物的大面积商业化推广。  Although plant transgenic technology has become one of the most important means of increasing food production and reducing environmental pollution in the world. However, since the birth of this technology, people have been arguing constantly. Compared with traditional breeding techniques, the biggest advantage of transgenic technology is that it breaks through the reproductive isolation between species. Under artificial conditions, the target gene is transferred to the recipient plants, and the traits of plants are modified to achieve resistance, such as insect resistance, drought resistance and disease resistance. Wait for the desired purpose of humans to increase crop yields. Biotechnology can be used to introduce genes from bacteria, viruses, animals, humans, distant plants, or even synthetic genes into plant genomes. This situation is almost impossible in nature, so one cannot predict how this transfer of genes will affect the future ecological environment and human health. Therefore, countries around the world (especially Europe) have concerns about the safety of GM technology, and fear that GM plants will cause damage to the ecological environment and even adversely affect human health. As the scope of GMO applications continues to expand, the scientific community and the public are increasingly concerned about the safety of GMOs. This concern has seriously affected the large-scale commercialization of GM crops.
目前, 人们对转基因作物生物安全性的担忧主要集中在两个方面:  At present, people's concerns about the biosafety of GM crops are mainly concentrated in two aspects:
一、 生态安全: 研究证明在许多农作物与其野生近缘种之间, 花粉介导的基因逃逸现象 非常普遍。 因此, 人们担心转基因植物中抗虫、 抗病、 抗除草剂等外源基因可能逃逸到自然 界中, 出现所谓的"超级杂草"。 某些抗虫基因 (如 Bt基因) 不仅能有效杀死害虫, 同时也 会对非靶标生物造成伤害。 另外, 转基因种子也可能借助风、 昆虫、 鸟等媒介进入其它环境 中, 进而可能破坏当地的生态平衡。上述问题都可能给生态平衡和生物多样性带来灾难性的 后果。  I. Ecological safety: Studies have shown that pollen-mediated gene escape is common between many crops and their wild relatives. Therefore, people are worried that foreign genes such as insect resistance, disease resistance and herbicide resistance in transgenic plants may escape into the natural world, and so-called "super weeds" appear. Certain insect-resistant genes (such as the Bt gene) not only kill pests effectively, but also harm non-target organisms. In addition, genetically modified seeds may also enter other environments by means of vectors such as wind, insects, and birds, which may damage the local ecological balance. All of the above problems can have disastrous consequences for ecological balance and biodiversity.
二、 食品安全: 公众担心转基因产品中的杀虫、 抗菌基因以及过敏蛋白会对人类健康不 利, 造成诸如慢性食物中毒、 癌变或过敏反应等危害。 最近的一项研究发现, 人体内微生物 的某些基因能够水平转移到人类基因组上。转基因食品的外源基因有可能通过人体微生物转 移到人类的染色体上, 给我们的健康和后代造成潜在危险。这种潜在的危险导致一些团体和 个人对转基因生物的强烈反对, 甚至要求销毁和完全抵制转基因生物。  2. Food Safety: The public is concerned that insecticidal, antibacterial and allergenic proteins in genetically modified products can be detrimental to human health, causing harm such as chronic food poisoning, cancer or allergic reactions. A recent study found that certain genes of microbes in the human body can be transferred horizontally to the human genome. The foreign genes of genetically modified foods are likely to be transferred to human chromosomes by human microbes, posing a potential hazard to our health and future generations. This potential danger has led to strong opposition from some groups and individuals to GMOs, and even requires the destruction and total resistance of GMOs.
对新兴技术采取完全的排斥和抵制是片面的。 JH确的方式是, 首先要充分认识到转基因 生物的安全隐患, 同时建立起转基因生物安全性的评估与控制体系, 确保其应用的安全性。 目前, 世界主要发达国家和部分发展中国家都制定了各自对转基因生物 (包括植物)的管理法 规, 负责对其安全性进行评价和监控。 但是, 这种管理、 评价和监控所需时间长, 不仅耗资 巨大、 难度也很大。 而且, 我国的农业生产的特点是以小型家庭经济为主。 因此, 要实现对 转基因种子的完全控制难度更大, 不利于转基因产品的商业化发展。 It is one-sided to adopt complete exclusion and resistance to emerging technologies. JH's way is to first fully understand the safety hazards of genetically modified organisms, and at the same time establish an assessment and control system for the safety of genetically modified organisms to ensure the safety of their application. At present, the major developed countries and some developing countries in the world have formulated their own regulations on genetically modified organisms (including plants), which are responsible for evaluating and monitoring their safety. However, this kind of management, evaluation and monitoring takes a long time, which is not only costly but also very difficult. Moreover, the characteristics of agricultural production in China are mainly based on small family economies. Therefore, it is more difficult to achieve complete control of genetically modified seeds, which is not conducive to the commercial development of genetically modified products.
在加强对转基因生物管理的同时,科学家们正在积极探索控制转基因生物安全隐患的生 物技术。消除转基因安全隐患技术的主要目的是控制或消除外源基因可能通过花粉和种子带 来的生物安全危害的途径。 该技术的要点是, 在外源基因 (如抗虫、 抗病、 抗除草剂)完成 其生物学功能后, 转基因植物向环境扩散或其产品被食用前, 消除这些外源基因的潜在安全 隐患。 生物技术由于操作简单, 成本低廉, 而受到各国科学家们的青睐。 然而, 现有的生物 技术大多不能满足 ffl间大规模种植转基因作物安全性控制的需要, 特别是水稻、 玉米、 油菜 等杂交作物种外源基因的生物安全隐患, 目前, 还没有一种有效适用的生物控制措施。  While strengthening the management of genetically modified organisms, scientists are actively exploring biotechnologies that control the safety risks of genetically modified organisms. The primary goal of eliminating GM safety hazards is to control or eliminate pathways through which biomarkers of foreign genes may pass through pollen and seeds. The main point of this technique is to eliminate the potential safety hazards of these foreign genes before the transgenic plants spread to the environment or their products are consumed after the biological functions of the foreign genes (such as insect, disease, and herbicide resistance) are completed. Biotechnology is favored by scientists all over the world because of its simple operation and low cost. However, most of the existing biotechnologies cannot meet the needs of the safety control of large-scale planting of transgenic crops in ffl, especially the biosafety risks of exogenous genes of hybrid crops such as rice, corn and rape. At present, there is no effective application. Biological control measures.
关于控制转基因生物安全隐患的技术研究已有许多报道。这些研究主要集中在如何控制 和消除抗生素等筛选标记基因的生物安全隐患上。一种策略是选用目前无争议的生物安全标 记基因, 如: 绿色荧光蛋白基因 (GFP)、 核糖醇操纵子 (NL)和 6-磷酸甘露糖异构酶基因 (PMI) 等。 这种策略无法解决目的基因 (如抗病基因)及启动子可能带来的生物安全隐患。 而另一 种策略是在抗生素等标记基因完成其功能后,利用生物技术手段将其从转基因植物基因组中 去除, 从而消除转基因可能造成的生物安全隐患。抗生素等外源基因删除的生物技术通常从 两方面考虑: 一方面, 为了防止转基因逃逸带来的生态问题, 花粉和种子不育技术、 "终止 子"技术、 叶绿体转基因技术等已经发展起来, 消除外源基因通过花粉或种子引起的扩散。 另一方面是关于转基因食用安全的问题, 相关的技术主要有: 转座子 (transposon ) 技术、 共转化 (co-transformation ) 技术、 无抗生素筛选标记基因转化技术等。  There have been many reports on technical research on controlling the safety hazards of genetically modified organisms. These studies have focused on how to control and eliminate the biosafety risks of screening marker genes such as antibiotics. One strategy is to use currently uncontroversial biosafety marker genes such as the green fluorescent protein gene (GFP), the ribitol operon (NL), and the 6-mannose mannose isomerase gene (PMI). This strategy does not address the potential biosafety risks of the target gene (such as disease resistance genes) and promoters. Another strategy is to remove biochemical means from the genome of the transgenic plant after the marker gene such as antibiotics completes its function, thereby eliminating the potential biosafety hazards caused by the transgene. Biotechnology for the removal of foreign genes such as antibiotics is usually considered in two ways: On the one hand, in order to prevent ecological problems caused by transgenic escape, pollen and seed infertility technology, "terminator" technology, chloroplast transgenic technology, etc. have been developed to eliminate The spread of foreign genes through pollen or seeds. On the other hand, it is about the safety of genetically modified foods. The related technologies include: transposon technology, co-transformation technology, and antibiotic-free screening marker gene transformation technology.
但是, 上述技术存在以下缺点: 一、 技术操作难度大, 且繁琐; 二、 无法同时解决转基 因的环境和食用安全问题; 三、 只考虑抗性标记基因的删除, 而忽视了目的基因可能带来的 安全性问题; 四、 删除外源基因的效率低、 周期长。 因此, 现有的技术均不能满足田间大规 模种植转基因作物安全性控制的需要。  However, the above techniques have the following disadvantages: 1. The technical operation is difficult and cumbersome; 2. The problem of the genetically modified environment and food safety cannot be solved at the same time; 3. Only the deletion of the resistance marker gene is considered, and the target gene may be neglected. Safety issues; Fourth, the removal of foreign genes is inefficient and long-term. Therefore, the existing technologies cannot meet the needs of large-scale planting of GM crop safety control.
此外, 来源于微生物的位点特异性重组酶系统, 也是一类很好的删除外源基因的工具。 目前, 已经在植物上得到较多应用的位点特异性重组酶系统包括: 一、 来源于细菌噬菌体 PI {Bacteriophage P I ) 的 Cre//o尸系统; 二、 来自于酵母 Saccharomyces cerevisiae ) 2μ 质粒的 FLP/Fi?r系统; 三、 来自于
Figure imgf000004_0001
raMxif pSRl质粒的 R/ ¾ 。
In addition, the site-specific recombinase system derived from microorganisms is also a good tool for deleting foreign genes. At present, site-specific recombinase systems that have been widely used on plants include: 1. Cre//o cadaveric system derived from bacteriophage PI {Bacteriophage PI); 2. From yeast Saccharomyces cerevisiae) 2μ plasmid FLP/Fi?r system;
Figure imgf000004_0001
raMxif pSRl plasmid R/3⁄4.
相对而言, 基于位点特异性重组酶系统 CxdloxP和 的基因删除技术因具有操 作简单易行, 删除效率高等优点, 近年来已被广泛应用到转基因植物生物安全控制中。 这些 系统工作原理简单,完成重组反应的元件仅需:重组酶(recombinase )和识别位点(recognition site ) 0其反应过程: 重组酶识别基因组中对应的特异性识别位点, 并与之结合形成" Holliday" 结构; 然后重组酶 C-端酪氨酸残基的羟基发生亲核攻击, 破坏识别位点中不对称 8 bp序列 两端的磷酸键; 随后重组酶 4个单体发生脂基转移反应, 将位于识别位点间的 DNA片断和 1个识别位点删除, 最后, 基因组 DNA再重新连接, 完成重组。 自重组酶系统在植物中应 用以来, 目前已经在烟草、 玉米、 水稻、 拟南芥等多种植物获得了标记基因的删除。 Relatively speaking, the gene deletion technology based on the site-specific recombinase system CxdloxP and has been widely used in biosafety control of transgenic plants in recent years due to its advantages of simple operation and high deletion efficiency. These systems work in a simple manner, and the components that complete the recombination reaction only need to be: a recombinase and a recognition site. 0 The reaction process: The recombinase recognizes the corresponding specific recognition site in the genome and combines with it. "Holliday"structure; then the nucleophilic attack of the hydroxyl group of the C-terminal tyrosine residue of the recombinase destroys the phosphate bond at both ends of the asymmetric 8 bp sequence in the recognition site; then the recombinase 4 monomers undergo a lipid transfer reaction , will be located between the recognition sites of DNA fragments and One recognition site is deleted, and finally, the genomic DNA is re-ligated to complete the recombination. Since the application of the recombinase system in plants, deletion of marker genes has been obtained in various plants such as tobacco, maize, rice, and Arabidopsis.
利用位点特异性重组酶系统删除外源基因主要有以下两种方式:  There are two main ways to delete a foreign gene using a site-specific recombinase system:
一、 反式作用删除外源基因。 主要用于标记基因的删除, 其基本策略: 构建两个植物表 达载体, 其中一个载体含有一对同向识别位点、 标记基因和目的基因, 并将标记基因置于同 向识别位点之间; 另一个载体含有 CaU5S等组成型启动子控制的重组酶基因表达元件。 当获得含有目的基因的转基因植物后, 其标记基因的删除有两种途径: 一是通过二次转化将 组成型表达的重组酶基因导入转基因植物中, 将位于识别位点间的标记基因删除掉 (Russell et al., 1992; Corneille et al., 2001 ; Marjanac et al., 2008); 二是将含有目的基因的转基因植株与 含有重组酶基因的植株杂交, 将含有目的基因的转基因植株中的标记基因删除 (Corneille et al., 2001 ; Arumugam et al., 2007)。 在这种删除策略中, 重组酶基因和识别位点位于不同的染 色体上, 两者的相互作用可看作是一种反式作用。 无论是二次转化还是杂交途径所获得的无 标记基因的植株, 都需通过有性世代的遗传分离, 去除重组酶基因, 因此操作繁琐, 时间较 长, 而且无法用于无性繁殖植物中标记基因的删除。  1. Trans-acting deletes foreign genes. It is mainly used for the deletion of marker genes. The basic strategy is to construct two plant expression vectors, one of which contains a pair of homologous recognition sites, a marker gene and a gene of interest, and the marker gene is placed between the same recognition sites. Another vector contains a recombinase gene expression element controlled by a constitutive promoter such as CaU5S. When the transgenic plant containing the gene of interest is obtained, the deletion of the marker gene can be carried out in two ways: First, the constitutively expressed recombinant enzyme gene is introduced into the transgenic plant by secondary transformation, and the marker gene located between the recognition sites is deleted. (Russell et al., 1992; Corneille et al., 2001; Marjanac et al., 2008); second, hybridization of a transgenic plant containing the gene of interest to a plant containing the recombinase gene, in a transgenic plant containing the gene of interest Marker gene deletion (Corneille et al., 2001; Arumugam et al., 2007). In this deletion strategy, the recombinase gene and recognition site are located on different chromosomes, and the interaction between the two can be seen as a trans-action. Plants with marker-free genes obtained by secondary transformation or hybridization pathways need to be genetically separated by sexual generation to remove the recombinase gene, which is cumbersome and time-consuming, and cannot be used for marker genes in asexually propagated plants. Deleted.
二、 位点特异性重组酶介导的基因自动删除。 在反式作用删除外源基因策略中, CaMV 2. Site-specific recombinase-mediated gene deletion. CaMV in the strategy of trans-acting delete foreign genes
35S启动子控制 Cre 重组酶超量表达常常导致植物表型异常, 如植株生长迟滞, 叶片黄化 (Coppoolse et al., 2003)。 因此, 作为方式一的改进, 将重组酶基因、 识别位点序列以及外源 基因放在同一表达载体上, 除目的基因外, 所有外源基因均位于识别位点之间。 重组酶基因 的表达受诱导型启动子或组织特异性启动子的控制,可以在转基因植物生长的任何组织或任 何阶段删除除目的基因外的所有外源基因 (包括标记基因)。 诱导型启动子控制的重组酶删 除技术删除外源基因具有可控性优点, 即当我们需要删除时, 可以人工诱导启动重组酶删除 外源基因, 而不需要时可让重组酶基因保持沉默。 然而由于其删除效率低且不彻底, 因而, 难于用于农业生产中, 控制转基因可能带来的生物安全问题。 而组织特异性启动子控制的重 组酶删除技术由于操作简单、 删除效率高而被广泛的研究和应用 (Gidoni et al., 2008)。 35S promoter control Cre recombinase overexpression often leads to plant phenotypic abnormalities such as plant growth retardation and leaf yellowing (Coppoolse et al., 2003). Therefore, as a modification of the first method, the recombinase gene, the recognition site sequence and the foreign gene are placed on the same expression vector, and all the foreign genes are located between the recognition sites except the target gene. The expression of the recombinase gene is controlled by an inducible promoter or a tissue-specific promoter, and all foreign genes (including marker genes) other than the gene of interest can be deleted at any stage or at any stage of growth of the transgenic plant. The inducible promoter-controlled recombinase deletion technique has the advantage of controlling the deletion of the foreign gene, that is, when we need to delete, the recombinant enzyme can be artificially induced to delete the foreign gene, and the recombinase gene can be silenced when it is not needed. However, due to its inefficient removal and incompleteness, it is difficult to use in agricultural production to control the biosafety problems that GM may bring. The recombinant enzyme deletion technology controlled by tissue-specific promoters has been widely studied and applied due to its simple operation and high deletion efficiency (Gidoni et al., 2008).
2002年, Keenan等提出了一种从转基因植物生产非转基因食品的技术思路 (Keenan and In 2002, Keenan et al. proposed a technical idea for producing non-GM foods from genetically modified plants (Keenan and
Stemmer, 2002): 即将所有外源基因置于 /0 识别位点之间, 用化学诱导启动子或组织特异 启动子控制重组酶基因的表达。 在化学诱导启动子控制下, 可以随时删除所有外源基因, 获 得非转基因植株。 更令人振奋的是: 如果用种子、 花粉、 果实等组织特异启动子控制重组酶 的表达, 就可以从转基因植物上生产出不含任何外源基因的种子、 花粉和果实等, 解决转基 因通过花粉和种子带来的生态安全问题, 以及转基因食品的食用安全问题。 Stemmer, 2002): Place all foreign genes between the / 0 recognition sites and control the expression of the recombinase gene with a chemically-inducible promoter or a tissue-specific promoter. Under the control of a chemically-inducible promoter, all foreign genes can be deleted at any time to obtain non-transgenic plants. What is even more exciting is: If tissue-specific promoters such as seeds, pollen, and fruits are used to control the expression of recombinase, seeds, pollen, and fruits without any foreign genes can be produced from transgenic plants to solve the transgenic passage. Ecological safety issues caused by pollen and seeds, and food safety issues of genetically modified foods.
在此基础上, 本实验研究人员曾与美国康涅狄格大学合作, 成功构建了"基因删除系统" ( "GM-gene-deletor" ) (Luo et al., 2007)。 该系统主要包括一对同向融合识别位点 /οχΡ- Γ 和由组织(如花粉或种子)特异性启动子控制的重组酶基因 FLP。 其中, 所有外源基因均置 于 /οχΡ- Γ识别位点序列之间。 转基因烟草试验结果表明, 该删除系统具有高效、 准确、 彻底等优点。 在采用 "GM-gene-dektor"系统的转基因植物中, 花粉或种子特异启动子控制重 组酶的表达, 目的基因 (如 在转基因植物的营养体 (根、 茎、 叶) 中正常表达而发挥其 生物功能, 而所有外源基因 (NP77/、 Gi/S和重组酶基因) 在花粉和种子的基因组中被高效 而彻底地删除, 删除效率达到 100%。 可以实现 keenan 等的"用转基因植物生产非转基因产 品"的设想。 该技术发表后, 被认为是"生物技术领域的一次重大革命"。 On this basis, the experimental researchers have successfully established the "GM-gene-deletor" (Luo et al., 2007) in cooperation with the University of Connecticut. The system consists essentially of a pair of homozygous fusion recognition sites/οχΡ-Γ and a recombinase gene FLP controlled by a tissue (eg pollen or seed) specific promoter. Among them, all foreign genes are placed between the /οχΡ-Γ recognition site sequences. The results of the transgenic tobacco test show that the deletion system has the advantages of high efficiency, accuracy and thoroughness. In transgenic plants using the "GM-gene-dektor" system, pollen or seed-specific promoters control weight The expression of the enzyme, the target gene (such as the normal expression in the vegetative (root, stem, leaf) of the transgenic plant to play its biological function, and all the foreign genes (NP77/, Gi/S and recombinase genes) in the pollen The genome of the seed and the seed is efficiently and completely deleted, and the deletion efficiency is 100%. The idea of "generating non-GMO products with transgenic plants" by Keenan et al. can be realized. After the publication of this technology, it is considered to be "a major revolution".
尽管 "GM-gene-deletor" 删除系统在转基因烟草中已经获得了很高达的删除效率 ( 100%), 实现了对所有外源基因的彻底删除, 但该系统目前还只能应用于无性繁殖的转基 因植物中。这是因为利用该技术一旦将外源基因导入植物基因组后, 外源基因的删除就随植 物的发育进程而程序性地自动进行, 导致外源基因在转基因植物 To代花粉或种子中就被完 全切除。 因而, 在转基因植物的后代中, 将不再具有提高植物抗性、 改良作物品质等外源目 的基因。也就是说,通过" GM-gene-deletor"技术导入的优良基因无法通过有性繁殖传给后代, 也就无法使农民享受转基因带来的利益。 而像玉米、 水稻、 小麦和油菜等主要农作物都是以 有性繁殖的方式进行转基因品种的培育。 因此, 如果" GM-gene-ddetor"系统能应用于有性繁 殖的植物中, 其重要性是不言而喻的。  Although the "GM-gene-deletor" deletion system has achieved very high deletion efficiency (100%) in transgenic tobacco, and the complete deletion of all foreign genes has been achieved, the system can only be applied to asexual reproduction. In transgenic plants. This is because once the foreign gene is introduced into the plant genome by using this technology, the deletion of the foreign gene is automatically and procedurally carried out along with the developmental process of the plant, resulting in the foreign gene being completely replaced in the transgenic plant To pollen or seed. resection. Therefore, in the progeny of transgenic plants, there will no longer be genes for exogenous purposes such as improving plant resistance and improving crop quality. That is to say, the excellent genes introduced through the "GM-gene-deletor" technology cannot be passed on to the offspring through sexual reproduction, and the farmers cannot enjoy the benefits brought by the genetic modification. Major crops such as corn, rice, wheat and canola are cultivated in the form of sexual reproduction. Therefore, if the "GM-gene-ddetor" system can be applied to plants that are sexually propagated, its importance is self-evident.
要实现通过" GM-gene-deletor"技术导入的外源基因在植物有性世代中的稳定遗传, 就 必需维持位于重组酶识别位点序列之间的重组酶基因在植物有性世代中沉默。 Zuo等(2001 ) 利用 XVE化学诱导系统控制重组酶基因的条件性表达, 实现了外源基因在转基因植株后代 的稳定遗传, 可以用于有性繁殖的植物, 然而删除效率只有 29%-60%, 只适用于选择标记 基因的删除, 且化学药品的使用也会带来环境污染问题。 Zhang等 (2003)将重组酶与识别位 点分别导入烟草中, 虽然实现了 基因在转基因 代营养体和生殖细胞中的删除, 然 而无法解决重组酶基因带来的潜在生物安全隐患。虽然, 重组酶对人类健康的危害还未见报 道,但有研究表明,高水平表达的 Cre重组酶蛋白能导致转基因小鼠 100%雄性不育 (Schmidt et al., 2000 因此, 在利用重组酶删除系统控制外源基因的生物安全隐患时, 必需考虑重组 酶可能带来的生物安全隐患。所以, 如何利用现有生物技术手段保证重组酶删除系统在植物 有性繁殖世代中稳定遗传的同时,实现在需要删除外源基因时能高效删除包括重组酶酶基因 在内的所有外源基因是目前重组酶删除技术应用所面临的一大技术瓶颈。  To achieve stable inheritance of a foreign gene introduced by the "GM-gene-deletor" technique in a sexual generation of plants, it is necessary to maintain the recombinase gene located between the recombinase recognition site sequences in the sexual generation of plants. Zuo et al. (2001) used the XVE chemical induction system to control the conditional expression of the recombinant enzyme gene, and realized the stable inheritance of the foreign gene in the progeny of the transgenic plants. It can be used for sexually reproducing plants, but the deletion efficiency is only 29%-60%. , only for the deletion of selectable marker genes, and the use of chemicals can also cause environmental pollution problems. Zhang et al. (2003) introduced recombinase and recognition sites into tobacco, respectively. Although the deletion of genes in transgenic trophozoites and germ cells was achieved, the potential biosafety risks caused by recombinant enzyme genes could not be solved. Although the harm of recombinant enzymes to human health has not been reported, studies have shown that high levels of Cre recombinase protein can cause 100% male sterility in transgenic mice (Schmidt et al., 2000, therefore, using recombinase When deleting the system to control the biosafety hazards of foreign genes, it is necessary to consider the biosafety risks that recombinant enzymes may bring. Therefore, how to use existing biotechnology to ensure that the recombinase deletion system is stably inherited in the sexual reproduction of plants, It is a major technical bottleneck faced by the current application of recombinant enzyme deletion technology to efficiently delete all foreign genes including the recombinase gene when the foreign gene needs to be deleted.
在现有的转基因调控技术中, 转录激活系统(transactivation system) 已被广泛地用于植 物基因的功能研究中。 该类系统的工作原理是基于基因转录激活的反式作用原理所建立的。 众所周知, 细胞起始基因转录需要有反式转录激活因子的参与。 反式转录激活因子, 例如酵 母转录因子 GAL4在结构上是组件式的(modular) ,往往由两个或两个以上结构上可以分开, 功能上相互独立的结构域 (domain) 构成, 其中有 DNA结合功能域 (DNA binding domain, DNA-BD)和转录激活结构域(activation domain, DNA-AD)。 这两个结合域将它们分开时仍 分别具有功能,但不能激活转录,只有当被分开的两者通过适当的途径在空间上较为接近时, 才能重新呈现完整的 GAL4 转录因子活性, 并可激活上游激活序列 (upstream activating sequence, UAS ) 的下游启动子(Target promoter) , 使启动子下游基因得到转录。 而且将来 源不同转录因子的 DNA结合功能域和转录激活结构域组成杂合蛋白, 该蛋白仍能同相应的 顺式作用元件结合,激活下游基因的转录。这种顺反作用是特异的,即特定的 Target promoter 只应答相应的 DNA结合功能域 (DNA binding domain, DNA-BD。 显然, 靶标启动子 (Target promoter) 控制的基因的表达与否及表达模式受控于转录激活蛋白的调控且与后者的表达模 式一致, 且在缺乏相应的转录激活因子时, 靶标启动子控制的下游基因将保持沉默。 Among the existing transgene regulation technologies, transcriptional activation systems have been widely used in functional studies of plant genes. The working principle of this type of system is based on the trans-action principle of gene transcription activation. It is well known that transcription of a cellular initiation gene requires the involvement of a trans-transcriptional activator. A trans-transcriptional activator, such as the yeast transcription factor GAL4, is structurally modular and is often composed of two or more structurally separate, functionally independent domains, among which DNA A binding domain (DNA-BD) and an activation domain (DNA-AD). These two binding domains still function separately when they are separated, but they cannot activate transcription. Only when the separated two are spatially close by appropriate pathways can the full GAL4 transcription factor be re-presented and activated. The downstream promoter of the upstream activating sequence (UAS) allows transcription of genes downstream of the promoter. Moreover, the DNA binding domain and the transcriptional activation domain of different transcription factors are combined to form a hybrid protein, and the protein can still be corresponding The cis-acting element binds to activate transcription of the downstream gene. This cis-reaction is specific, that is, the specific Target promoter only responds to the corresponding DNA binding domain (DNA-BD). Obviously, the expression of the gene controlled by the target promoter and its expression pattern are affected. The regulation of transcriptional activator is controlled and consistent with the expression pattern of the latter, and in the absence of the corresponding transcriptional activator, the downstream gene controlled by the target promoter will remain silent.
目前, 据此原理设计的许多高效转录激活系统已被广泛用于植物基因功能、 基因克隆、 enhancer trapping等研究中。 其中, 转录激活系统通过有性杂交激活目的基因的反式作用原 理正好与有性繁殖植物的特点相吻合,即可以利用转绿激活系统作为分子开关反式控制重组 酶删除系统, 维持外源基因在作物有性繁殖时代中的稳定遗传, 然后通过杂交的方式实现外 源基因在植物特定发育时空中删除, 解决现有重组酶删除技术特别是" GM-gene-ddetor"技术 无法用于有性繁殖植物生物安全控制的问题。 发明内容  At present, many efficient transcriptional activation systems designed according to this principle have been widely used in plant gene function, gene cloning, enhancer trapping and other research. Among them, the transactivation principle of transcriptional activation system to activate the target gene by sexual hybridization coincides with the characteristics of sexual reproduction plants, that is, the green activation system can be used as a molecular switch to control the recombinase deletion system and maintain the foreign gene. Stable inheritance in the era of sexual reproduction of crops, and then through the hybridization method to achieve the removal of foreign genes in the specific development of plants, solving the existing recombinant enzyme deletion technology, especially the "GM-gene-ddetor" technology can not be used for sexuality The problem of reproductive plant biosecurity control. Summary of the invention
鉴于以上情况, 为了解决" GM-gene-deletor" 等现有基因删除技术不能解决有性繁殖植 物外源基因生物安全隐患控制的技术难题,本发明提供了一种有效控制有性繁殖植物转基因 生物安全的基因自动删除双元系统 (GAEBS )。 该系统利用转绿激活系统作为分子开关反式 控制重组酶删除系统的表达,一方面维持了位于重组酶识别位点之间的重组酶基因在植物有 性世代中沉默, 实现 "GM-gene-deletor"技术导入的外源基因在植物有性世代中的稳定遗传; 另一方面通过杂交的方式, 使转录激活系统的两个相互配合的元件合拢, 从而呈现转录激活 因子活性的同时,利用植物组织特异性启动子启动重组酶基因的表达进而实现外源基因的删 除, 解决外源基因可能带来的生物安全隐患问题。  In view of the above situation, in order to solve the technical problem that the existing gene deletion technology such as "GM-gene-deletor" cannot solve the safety hazard control of the exogenous gene of sexually reproducing plants, the present invention provides an effective control of sexually reproducing plant genetically modified organisms. Safe Gene Automatic Deletion Binary System (GAEBS). The system uses the green-activated system as a molecular switch to control the expression of the recombinase deletion system. On the one hand, the recombinase gene located between the recombinase recognition sites is silenced in the sexual generation of plants, achieving "GM-gene- The deletor "technology-introduced foreign gene is stably inherited in the sexual generation of plants; on the other hand, by means of hybridization, the two interacting elements of the transcriptional activation system are brought together to exhibit transcriptional activator activity while utilizing plants The tissue-specific promoter initiates the expression of the recombinase gene to realize the deletion of the foreign gene, and solves the biosafety potential problem that the foreign gene may bring.
根据本发明的一个方面,本发明的一个目的是提供一种用于有性繁殖植物外源基因生物 安全控制的基因自动删除双元系统, 所述基因自动删除双元系统通过构建两个植物表达载 体, 分别称为第一植物表达载体和第二植物表达载体, 来实现有性繁殖植物外源基因生物安 全性的控制。 其中, 植物表达载体包括必要的元件和携带这些元件的质粒载体, 用于构建第 一植物表达载体的元件称为效应子元件, 以下称 Effector元件, 用于构建第二植物表达载体 元件称为激活子元件, 以下称 Activator元件。 具体地说, Effector元件包括两个同向的重组 酶特异识别位点; 且在所述两个同向重组酶特异性识别位点之间插入下述基因或核苷酸: 控 制外源基因表达的启动子、用于导入外源基因的多克隆位点、重组酶基因以及维持所述重组 酶基因沉默的靶标启动子 (target promoted Activator元件包括两个同向的重组酶特异识别 位点; 在所述两个重组醇特异性识别位点之间插入下述基因或核苷酸: 控制外源基因表达的 启动子、 用于导入外源基因的多克隆位点、 控制转录激活因子基因的启动子以及与 Effector 元件中的靶标启动子配合的转录激活因子基因。 通过将上述效应子元件 /激活子元件可操作 地插入质粒载体构建第一植物表达载体和第二植物表达载体,通过第一植物表达载体和第二 植物表达载体,分别将所述 Effector元件和 Activator元件导入植物基因组中,当携带 Effector 元件和 Activator元件的植物作为亲本相互杂交时, 所述 Effector元件中的靶标启动子将与 Activator元件中的转录激活因子基因相结合,使转录激活因子的活性得到呈现并可激活控制 转录激活因子基因的启动子活性从而使重组酶基因得到表达,实现包括重组酶基因在内的所 有外源基因的删除, 达到控制有性繁殖植物外源基因生物安全性的目的。 According to an aspect of the present invention, it is an object of the present invention to provide an automatic deletion binary system for the safe control of exogenous gene organisms for sexually reproducing plants, which automatically deletes the binary system by constructing two plant expressions. The vectors, referred to as the first plant expression vector and the second plant expression vector, respectively, are used to control the safety of the exogenous gene organism of the sexually propagated plant. Wherein, the plant expression vector comprises the necessary elements and a plasmid vector carrying the elements, and the element for constructing the first plant expression vector is called an effector element, hereinafter referred to as an Effector element, for constructing a second plant expression vector element called activation Subcomponents, hereinafter referred to as Activator components. Specifically, the Effector element comprises two homologous recombinase specific recognition sites; and the following genes or nucleotides are inserted between the two same recombinase specific recognition sites: Controlling the expression of the foreign gene a promoter, a multiple cloning site for introducing a foreign gene, a recombinase gene, and a target promoter that maintains the recombinase gene silencing (the target promoted Activator element includes two homologous recombinase-specific recognition sites; Inserting the following genes or nucleotides between the two recombinant alcohol-specific recognition sites: a promoter for controlling expression of a foreign gene, a multiple cloning site for introducing a foreign gene, and controlling initiation of a transcriptional activator gene And a transcriptional activator gene that cooperates with a target promoter in the Effector element. The first plant expression vector and the second plant expression vector are constructed by operably inserting the above effector element/activator element into the plasmid vector, by the first plant An expression vector and a second plant expression vector, respectively introducing the Effector element and the Activator element into the plant genome, when carrying the Effector When the element and the plant of the Activator element hybridize as a parent, the target promoter in the Effector element will The transcriptional activator gene in the Activator element combines to activate the activity of the transcriptional activator and activate the promoter activity of the transcriptional activator gene to express the recombinase gene, enabling all exogenous sources including the recombinase gene. The deletion of genes achieves the goal of controlling the safety of exogenous genetic organisms in sexually reproducing plants.
进一步地说,本发明中用于有性繁殖植物转基因生物安全性控制的基因自动删除双元系 统中的重组酶删除系统可以是从动物、植物或微生物中分离克隆到的天然重组酶系统, 或者 是人工改造、 设计合成的重组酶系统; 优选来源于细菌噬菌体 PI { Bacteriophage PI ) 的 CrdloxP系统和 Creint/ xP系统,或来自于酵母 Saccha丽 yces cerev/w'ae )2 质粒的 系统。 所述重组酶特异性识别位点序列优选 /α 、 lox2272, tec5 7 和^ Γ识别位点, 所述 重组酶基因选自 FLP、 Cre和 Cn?'"''基因。其中 cre'"t基因为含有植物来源内含子的人工改造 过的重组酶基因, 具有如 SEQ ID No. 11 所示的核苷酸序列, 其中植物来源的内含子为 pCAMBIA 1305.1 ( GenBank 登录号: AF354045.1 ) , 载体上 GUS基因的内含子为 catalase intron。 Further, the recombinase deletion system in the automatic deletion binary system for the safety control of sexually reproducing plant transgenic organisms in the present invention may be a natural recombinase system isolated and cloned from animals, plants or microorganisms, or It is an artificially engineered, designed synthetic recombinase system; preferably a CrdloxP system derived from the bacteriophage PI { Bacteriophage PI ) and a Cre int / xP system, or a system derived from the yeast Saccha yces cerev / w'ae ) 2 plasmid. The recombinant enzyme is preferably a sequence specific recognition site / α, lox2272, tec5 7 ^ Γ recognition sites and the recombinase gene is selected from FLP, Cre and Cn? '"''Gene. Wherein cre'" t group Since the artificially engineered recombinase gene containing a plant-derived intron has a nucleotide sequence as shown in SEQ ID No. 11, wherein the plant-derived intron is pCAMBIA 1305.1 (GenBank accession number: AF354045.1) The intron of the GUS gene on the vector is catalase intron.
进一歩地说, 本发明中用于控制转录激活因子基因的启动子可以是从动物、 植物或微生 物中分离克隆到的天然启动子, 也可以是人工改造或设计合成的启动子; 优选强启动子或组 织特异性启动子, 特别是椰菜花叶病毒 (CaMV)35S启动子 (Ca 5S)。  Further, the promoter for controlling the transcription activator gene in the present invention may be a natural promoter isolated and cloned from an animal, a plant or a microorganism, or may be a artificially engineered or designed synthetic promoter; A sub- or tissue-specific promoter, in particular the cauliflower mosaic virus (CaMV) 35S promoter (Ca 5S).
进一步地说, 本发明中转录激活系统可以为动物、微生物中分离克隆得到的天然转录激 活系统, 或者是人工改造、 设计合成的转录激活系统, 优选 tTA/TOP10/pTAX、 Gal4:VP16/UAS、 mGal4:VP16 UAS或 pOp/LhG4等人工设计的转录激活系统。 特别是, 靶 标启动子为 ρθρ,和与之配合的转录激活因子基因为 ^G ra,后者是转录激活因子基因 AC^ 的改进版, 其密码子具有拟南芥密码子偏好性。 Further, the transcriptional activation system of the present invention may be a natural transcriptional activation system obtained by isolation and cloning in an animal or a microorganism, or an artificially modified, designed and synthesized transcriptional activation system, preferably tTA/TOP10/pTAX, Gal4: VP16/UAS, mGal4: Artificially designed transcriptional activation system such as VP16 UAS or pOp/LhG4. In particular, the target promoter is ρθρ, and the transcriptional activator gene associated therewith is ^G ra , which is an improved version of the transcriptional activator gene AC^ with codons having Arabidopsis codon preference.
根据本发明的另一个方面,提供包含上述 Effector元件和 Activator元件的植物表达载体, 即第一植物表达载体和第二植物表达载体, 以下分别称 Effector植物表达载体和 Activator 植物表达载体。 所述 Effector植物表达载体包括两个同向的重组酶特异识别位点; 且在所述 两个同向重组酶特异性识别位点之间插入下述基因或核苷酸: 控制外源基因表达的启动子、 用于导入外源基因的多克隆位点、 重组酶基因以及维持所述重组酶基因沉默的靶标启动子。 所述 Activator植物表达载体包括两个同向的重组酶特异识别位点; 在所述两个重组酶特异 性识别位点之间插入下述基因或核苷酸: 控制外源基因表达的启动子、用于导入外源基因的 多克隆位点、 控制转录激活因子基因的启动子以及与 Effector元件中的靶标启动子配合的转 录激活因子基因。  According to another aspect of the present invention, there is provided a plant expression vector comprising the above Effector element and an Activator element, namely a first plant expression vector and a second plant expression vector, hereinafter referred to as an Effector plant expression vector and an Activator plant expression vector, respectively. The Effectsor plant expression vector comprises two homologous recombinase specific recognition sites; and the following genes or nucleotides are inserted between the two same recombinase specific recognition sites: controlling the expression of the foreign gene a promoter, a multiple cloning site for introducing a foreign gene, a recombinase gene, and a target promoter that maintains the recombinase gene silencing. The Activator plant expression vector comprises two homologous recombinase specific recognition sites; the following genes or nucleotides are inserted between the two recombinase specific recognition sites: a promoter for controlling expression of a foreign gene a multiple cloning site for introducing a foreign gene, a promoter for controlling a transcriptional activator gene, and a transcriptional activator gene that cooperates with a target promoter in an Fcector element.
根据本发明的又一个方面, 本发明的另一个目的是提供上述基因自动删除双元系统在制 备安全的转基因植物中的用途。当分别携带 Effector元件和 Activator元件的植物作为亲本相 互杂交时,所述 Effector元件中的靶标启动子将与 Activator元件中的转录激活因子基因结合, 呈现转录激活因子的活性并可激活控制转录激活因子基因的启动子活性从而使重组酶基因 得到表达, 实现包括重组酶基因在内的所有外源基因的删除, 达到控制有性繁殖植物外源基 因生物安全性的目的。 本发明的再一个方面是提供一种制备安全的转基因植物的方法,首先是构建基因自动删 除双元系统的 Effector元件和 Activator元件, 并将需要导入植物基因组的外源基因插入 Effector元件和 /或 Activator元件的多克隆位点中, 然后分别将得到的 Effector植物表达载体 和 Activator植物表达载体转化到宿主植物中, 获得第一基因植物以及第二转基因植物, 以 下分别称为 Effector转基因植物以及 Activator转基因植物; 最后将 Effector转基因植物以及 Activator转基因植物作为亲本进行杂交,使分别来自 Effector转基因植株和 Activator转基因 植株的 Activator元件和 Effector元件合拢,重新呈现转录激活因子活性并在植物组织特异性 的启动子的作用开启重组酶基因的表达,最终实现包括重组酶基因在内的所有外源基因的删 除, 获得安全的转基因植物。 According to still another aspect of the present invention, another object of the present invention is to provide the use of the above-described automatic gene deletion binary system for preparing a safe transgenic plant. When plants carrying the Effector element and the Activator element, respectively, hybridize as a parent, the target promoter in the Effector element will bind to the transcriptional activator gene in the Activator element, exhibit transcriptional activator activity and activate transcriptional activator The promoter activity of the gene enables expression of the recombinase gene, and the deletion of all exogenous genes including the recombinase gene is achieved, thereby achieving the purpose of controlling the safety of the exogenous gene of the sexually propagated plant. Still another aspect of the present invention provides a method for preparing a safe transgenic plant, firstly constructing an Effector element and an Activator element for automatically deleting a binary system, and inserting a foreign gene to be introduced into a plant genome into an Effector element and/or In the multiple cloning site of the Activator element, the obtained Effector plant expression vector and Activator plant expression vector are respectively transformed into the host plant to obtain the first gene plant and the second transgenic plant, respectively, which are respectively referred to as the Effectsor transgenic plant and the Activator transgene. Plants; Finally, the Effectsor transgenic plants and the Activator transgenic plants were crossed as parents, and the Activator elements and the Effectsor elements from the Effectsor transgenic plants and Activator transgenic plants were respectively closed, and the transcriptional activator activity was re-expressed and the promoters specific for plant tissues were The action turns on the expression of the recombinase gene, and finally the deletion of all exogenous genes including the recombinase gene is achieved, and a safe transgenic plant is obtained.
本发明针对" GM-gene-deletor"等基因删除技术无法维持外源基因在植物有性世代中稳 定遗传的缺点, 通过大量研究和分析以及前期试验, 创造性地提出利用转录激活系统 (transactivation system )作为分子幵关控制重组酶删除系统的表达, 构建了一种全新的基因 自动删除双元系统 GAEBS。 根据 GAEBS的工作原理, 在大量筛选转录激活系统和重组酶 系统的基础上, 采用了 pOp/LhG4转录激活系统和 Cre/loxp重组酶系统构建 GAEBS系统, GAEBS系统中的 Activator元件和 Effector元件可以转入本领域常用的载体中构建成表达载 体再转入植物基因组中。在 Activator元件和 Effector元件中均提供了用于外源功能基因插入 的多克隆位点序列, 任何外源功能基因均可插入其中, 用于植物基因工程的遗传改良。  The present invention is directed to the defect that the gene deletion technology such as "GM-gene-deletor" cannot maintain the stable inheritance of the foreign gene in the sexual generation of the plant, and creatively proposes the use of a transcription activation system (transactivation system) through extensive research and analysis and preliminary experiments. As a molecularly controlled recombinant enzyme deletion system, a new gene automatic deletion binary system GAEBS was constructed. According to the working principle of GAEBS, based on a large number of screening transcriptional activation systems and recombinase systems, the pOp/LhG4 transcriptional activation system and the Cre/loxp recombinase system were used to construct the GAEBS system. The Activator component and the Effector component in the GAEBS system can be transferred. The expression vector is constructed into a vector commonly used in the field and then transferred into the plant genome. A multiple cloning site sequence for insertion of a foreign functional gene is provided in both the Activator element and the Effector element, and any exogenous functional gene can be inserted therein for genetic improvement of plant genetic engineering.
本发明中转基因烟草实验结果表明,通过 Effector转基因植物与 Activator转基因植物的 有性杂交,在植物组织特异性启动子 CaMV 35S调控的基因自动删除系统的指导下能高效地 将来源于双亲的所有外源基因从杂交后代的特定组织或部位中彻底删除, 删除效率达到 100%。因此, 本发明成功地构建了基因自动删除双元系统 GAEBS和包含该系统的植物表达 载体, 该系统成功解决了现有技术无法解决有性繁殖世代中外源基因稳定遗传的技术难题, 即维持了位于重组酶识别位点序列之间的重组酶基因在植物有性世代中沉默, 实现 "GM-gene-deletor"技术导入的外源基因在植物有性世代中的稳定遗传; 并利用植物组织特异 性启动子在特定的组织或部位启动重组酶的表达从而删除外源基因,解决外源基因可能带来 的生物安全隐患问题, 具有明显有益的效果。 附图的简要说明  The experimental results of the transgenic tobacco in the present invention indicate that the sexual hybridization of the Effectsor transgenic plant and the Activator transgenic plant can efficiently and efficiently all the foreign parents derived from the automatic deletion system of the plant tissue-specific promoter CaMV 35S. The source gene is completely removed from the specific tissues or parts of the hybrid progeny, and the deletion efficiency reaches 100%. Therefore, the present invention successfully constructs the gene automatic deletion binary system GAEBS and the plant expression vector comprising the same, and the system successfully solves the technical problem that the prior art cannot solve the stable inheritance of the foreign gene in the sexual reproduction generation, that is, maintains the technical problem. The recombinase gene located between the recombinase recognition site sequences is silenced in the sexual generation of plants, and the foreign genes introduced by the "GM-gene-deletor" technology are stably inherited in the sexual generation of plants; The sexual promoter initiates the expression of the recombinase in a specific tissue or site to delete the foreign gene, and solves the biosafety problem that the foreign gene may bring, and has obvious beneficial effects. BRIEF DESCRIPTION OF THE DRAWINGS
图 1为携带有 CaMV 35S-GFP-nos元件的克隆载体 pUC-CaMV 35S-GFP-nos结构示意图 其中, CaMV35S和 35S为来源于花椰菜花叶病毒的植物组织特异性启动子; mGF er (本 发明简称为" GFP") 为绿色荧光蛋白基因; 为冠瘿碱合成酶基因转录终止序列。 为安 卡青霉素抗性基因, 用于阳性克隆子的筛选。 Figure 1 is a schematic diagram showing the structure of a cloning vector pUC-CaMV 35S-GFP-nos carrying a CaMV 35S-GFP-nos element, wherein CaMV35S and 35S are plant tissue-specific promoters derived from cauliflower mosaic virus; m GF er (this The invention is abbreviated as "GFP" as a green fluorescent protein gene; it is a transcription termination sequence of the stalk synthase gene. It is an ampicillin resistance gene for screening of positive clones.
图 2 为携带有 35S-bar-nos元件的克隆载体 pUC-35S-bar-nos结构示意图  Figure 2 is a schematic diagram showing the structure of a cloning vector pUC-35S-bar-nos carrying a 35S-bar-nos element.
其中, bar为膦丝菌素乙酰转移酶 (phosphinthricin acetyltransferase, PAT)基因。  Among them, bar is a phosphinthricin acetyltransferase (PAT) gene.
图 3为含有 Spacer序列的克隆载体 pBS-spacer结构示意图 Spacer片段为来自 pCAMBIA4956:ET15载体的长约 2.4 kb的非功能片段。 图 4 为 携带有 loxp-CaMV35S:GFP-MCS-35S:bar-loxp 元件的双元表达载体 ρίοχρΰΜΒίοχρ的构建流程图。 Figure 3 is a schematic diagram showing the structure of a cloning vector pBS-spacer containing a Spacer sequence. The Spacer fragment is a non-functional fragment of approximately 2.4 kb in length from the pCAMBIA4956:ET15 vector. Figure 4 is a flow chart showing the construction of the binary expression vector ρίοχρΰΜΒίοχρ carrying the loxp-CaMV35S:GFP-MCS-35S:bar-loxp element.
其中, ΝΡΤΙΠ为卡那霉素抗性基因; ΝΡΤΙΙ为新霉素磷酸转移酶基因; LB为 T-DNA 左边界; RB为 T-DNA右边界; / w ^为 cre//oxp重组酶系统的识别位点序列。 pBIN 19为用 于构建植物表达载体的骨架载体。  Wherein, ΝΡΤΙΠ is a kanamycin resistance gene; ΝΡΤΙΙ is a neomycin phosphotransferase gene; LB is a T-DNA left border; RB is a T-DNA right border; / w ^ is a cre//oxp recombinase system Identify the sequence of sites. pBIN 19 is a backbone vector for construction of plant expression vectors.
图 5 为含有 lox2272-CaMV35S:GFP-MCS-35S:bar-lox2272 元件的双元表达载体 plox2272GMNlox2272的构建流程图。  Figure 5 is a flow chart showing the construction of the binary expression vector plox2272GMNlox2272 containing the lox2272-CaMV35S:GFP-MCS-35S:bar-lox2272 element.
其中, Loxp2272为 ίοχρ序列的突变型识别位点序列; nosP为冠瘿碱合成酶基因启动子。 图 6为含有 loxp-CaMV35S:GUS:NPTII-MCS-loxp的双元载体 pZ^ GN-MCS的构建流 程图。  Among them, Loxp2272 is a mutant recognition site sequence of ίοχρ sequence; nosP is a promoter of the opine synthase gene. Figure 6 is a flow chart showing the construction of the binary vector pZ^ GN-MCS containing loxp-CaMV35S:GUS:NPTII-MCS-loxp.
Amp-r为氨苄青霉素抗性基因。  Amp-r is an ampicillin resistance gene.
图 7为含有 pOp:cre'm元件的 Effector植物表达载体 pLOCB的构建流程图。 Figure 7 is a flow chart showing the construction of the Effectsor plant expression vector pLOCB containing the pOp:cre' m element.
T3A为豌豆核酮糖 -1, 5-二磷酸羧化酶小亚基 rbcS-3A基因的 polyA序列; ΡΛ为氨苄青 霉素抗性基因。 T3A is the polyA sequence of the pea ribulose-1,5-bisphosphate carboxylase small subunit rbcS-3A gene; Ρ Λ is the ampicillin resistance gene.
图 8为含有 pOp:cre'm元件的 Effector植物表达载体 pL22720CN的构建流程图。 Figure 8 is a flow chart showing the construction of the Effectsor plant expression vector pL22720CN containing the pOp:cre' m element.
图 9为含有 35S:LhG4ATO元件的 Activator植物表达载体 pL35SLhG4构建流程图。 Figure 9 is a flow diagram showing the construction of the Activator plant expression vector pL35SLhG4 containing the 35S:LhG4 ATO element.
图 10为 Effector转基因烟草植株的检测图。  Figure 10 is a test diagram of the Effector transgenic tobacco plants.
其中, A和 B为转基因植株不同组织中 GF 基因表达的荧光检测图。 A为 GFT基因 在转基因叶片中的表达; B为 GFP基因在转基因根中的表达。 CK为野生型再生植株组织。 C为部分 pLOCB转基因烟草的 PCR验证结果。其中, P泳道为以 pLOCB质粒为模板; 1 -10 泳道为以 pLOCB GFP+阳性植株的 DNA为模板。 D为 pL22720CN转基因烟草的 PCR验证。 其中, 11 -20泳道为以 pL22720CN GFP+阳性植株的 DNA为模板。 M泳道为 DNA分子 marker; H泳道为以 H20为模板; WT为以非转基因再生植株的 DNA为模板。 扩增的靶标 片段为长约 0.8 kb的 pOp-creint片段。 Bar=3mm。 Among them, A and B are fluorescence detection maps of GF gene expression in different tissues of transgenic plants. A is the expression of GFT gene in transgenic leaves; B is the expression of GFP gene in transgenic roots. CK is a wild-type regenerated plant tissue. C is the PCR validation result for partial pLOCB transgenic tobacco. Among them, the P lane is the pLOCB plasmid as a template; the 1 -10 lane is the DNA of the pLOCB GFP + positive plant as a template. D is the PCR verification of pL22720CN transgenic tobacco. Among them, the 11-20 lanes were DNA of pL22720CN GFP+ positive plants. The M lane is a DNA molecule marker; the H lane is H 2 0 as a template; and the WT is a DNA of a non-transgenic regenerated plant as a template. The amplified target fragment is a pOp-cre int fragment of about 0.8 kb in length. Bar = 3mm.
图 11为 Activator转基因烟草植株的获得检测图。  Figure 11 is a graph showing the acquisition of Activator transgenic tobacco plants.
其中, A和 B为转基因植株不同组织中 基因表达的组织化学染色分析。 A为转基 因根、 茎、 叶中的 GUS组织化学染色结果图; B为非转基因植株的根、 茎、 叶的 GUS组织 化学染色结果图。 C为 pL35SLhG4转基因烟草的 PCR验证结果图。 其中, M泳道为 DNA 分子 marker; WT为以非转基因再生植株的 DNA为模板。 P泳道 为 以 pL35SLhG4质粒 为模板; 1-9泳道为 以 pL35SLhG4 GUS+阳性植株的 DNA为模板。扩增的靶标片段为长约 1.4 kb的 35S-LhG4ATO片段。 Bar=2mm。 Among them, A and B are histochemical staining analysis of gene expression in different tissues of transgenic plants. A is the result of GUS histochemical staining in transgenic roots, stems and leaves; B is the result of GUS histochemical staining of roots, stems and leaves of non-transgenic plants. C is a PCR verification result graph of pL35SLhG4 transgenic tobacco. Wherein, M lane is a DNA molecule marker; WT is a DNA of a non-transgenic regenerated plant as a template. The P lane is the pL35SLhG4 plasmid as a template; the lanes 1-9 are the DNA of the pL35SLhG4 GUS+ positive plant as a template. The amplified target fragment is a 35S-LhG4 ATO fragment of about 1.4 kb in length. Bar = 2mm.
图 12为 GAEBS系统在同一 pL35SLhG4植株与不同 pLOCB植株的杂交后代中删除外 源基因的效率分析图。  Figure 12 is a graph showing the efficiency of deletion of foreign genes in the hybrid progeny of the same pL35SLhG4 plant and different pLOCB plants by the GAEBS system.
分别统计后代种子中系统删除 GFP和 Gf/S基因的删除效率, 然后计算平均删除效率- 平均删除效率 (%) = (删除 GE 基因的效率 +删除 Gi/S基因的效率) /2。 Separate the deletion efficiency of the GFP and Gf/S genes in the offspring seeds, and then calculate the average deletion efficiency - Average deletion efficiency (%) = (efficiency of deletion of GE gene + efficiency of deletion of Gi/S gene) /2.
图 13为 GAEBS系统在同一 pLOCB植株与不同 pL35SLhG4植株的杂交后代中删除外 源基因的效率分析图。  Figure 13 is a graph showing the efficiency of deletion of foreign genes in the hybrid progeny of the same pLOCB plant and different pL35SLhG4 plants by the GAEBS system.
分别统计后代种子中系统删除 G 和 基因的删除效率, 然后计算平均删除效率: 平均删除效率 (%) = (删除 基因的效率 +删除 Gi/S基因的效率) /2。  The deletion efficiency of systematic deletion of G and genes in the offspring seeds was separately calculated, and then the average deletion efficiency was calculated: average deletion efficiency (%) = (efficiency of deletion gene + efficiency of deletion of Gi/S gene) /2.
图 14为 GAEBS系统在 pL22720CN植株与 pL35SLhG4植株的杂交后代中删除外源基 因的效率分析图。  Figure 14 is a graph showing the efficiency of deletion of exogenous genes in the hybrid progeny of the pL22720CN plant and the pL35SLhG4 plant by the GAEBS system.
分别统计后代种子中系统删除 G P基因和 Gi/S的删除效率, 然后计算平均删除效率: 平均删除效率 (%) = (删除 基因的效率 +删除 基因的效率) /2。  The deletion efficiency of the G P gene and Gi/S was systematically deleted in the offspring seeds, and then the average deletion efficiency was calculated: the average deletion efficiency (%) = (the efficiency of deleting the gene + the efficiency of deleting the gene) /2.
图 15为不同基因自动删除双元系统删除外源基因效率的统计结果图。  Figure 15 is a graph showing the statistical results of the efficiency of deleting the exogenous gene by the automatic deletion of the binary system by different genes.
误差棒 Vertical bars=S.E.。 其中, 表示 GAEBS系统在 pL222720CNxpL35SLhG4杂 交后代中删除 Activator 外源基因的效率显著高于在 PLOCBxpL35SLhG4 杂交后代中删除 Activator外源基因的效率 (p<0.05; t-test)。 表示系统在在 pLOCBxpL35SLhG4 杂交后 代中删除 Activator外源基因的效率明显低于删除 Effector外源基因的效率,差异达到极显著 水平 (p<0.01 ; t-test)。 Error bars Vertical bars=SE. Among them, the GAEBS system showed a significantly higher efficiency in deleting the Activator foreign gene in the progeny of pL222720CNxpL35SLhG4 hybridization than in the P LOCBxpL35SLhG4 hybrid progeny (p<0.05; t-test). It is indicated that the efficiency of deleting the Activator exogenous gene in the progeny of pLOCBxpL35SLhG4 hybridization is significantly lower than that of deleting the foreign gene of Effector, and the difference is extremely significant (p<0.01; t-test).
图 16为系统在转基因植物杂交后代中删除外源基因之后残余片段的 PCR分析图。 其中, M为 DNA分子 marker; G71 15为以 2272-1 l x35S-5杂交 代基因组 DNA为 模板; Π 7413为以 L 174X35S-13杂交 F,代基因组 DNA为模板; f413为以 35S-4xL13杂交 F,代基因组 DNA为模板; L13 为以 L13转基因植株亲本基因组 DNA为模板; Π95为以 L79x35S-5杂交 代基因组 DNA为模板; fl 316为以 L131 > 35S-6杂交 代基因组 DNA 为模板; Π 987为以 L198x35S-7杂交 F t基因组 DNA为模板; 35S-4为以 35S-4转基因植 株亲本基因组 DNA为模板。 扩增用引物参见 SEQ ID N0.36和 SEQ ID N0. 37。 如果外源基 因被删除, 将扩增得到约 800bp的特异条带, 否则将扩增得到约 7.3kb或 /和 9.1kb的条带。  Figure 16 is a PCR analysis of the residual fragments of the system after deletion of the foreign gene in the progeny of the transgenic plants. Wherein, M is a DNA molecular marker; G71 15 is a 2272-1 l x35S-5 hybrid genomic DNA as a template; Π 7413 is a L 174X35S-13 hybrid F, and the genomic DNA is used as a template; f413 is a 35S-4xL13 hybrid F, the genomic DNA is used as a template; L13 is the genomic DNA of the L13 transgenic plant as a template; Π95 is the L79x35S-5 hybrid genomic DNA as a template; fl 316 is the L131 > 35S-6 hybrid genomic DNA as a template; 987 is a L198 genomic DNA hybridized with L198x35S-7 as a template; 35S-4 is a parental genomic DNA of a 35S-4 transgenic plant as a template. Primers for amplification are shown in SEQ ID N0.36 and SEQ ID NO. If the foreign gene is deleted, a specific band of about 800 bp will be amplified, otherwise a band of about 7.3 kb or / and 9.1 kb will be amplified.
图 17为系统转基因植物杂交后代中删除外源基因的 PCR分析图。  Figure 17 is a PCR analysis diagram of deletion of a foreign gene in a progeny of a transgenic plant.
其中 M泳道为 DNA分子 marker。 2272-1 1泳道为以 2272-1 1母本基因组为模板; Ω7115 泳道为以 2272-11 X35S-5杂交 F,代基因组 DNA为模板; 35S-5泳道为以 35S-5父本基因组 为模板。 L79泳道为以 L79母本基因组为模板; f795为以 L79x35S-5杂交!^代基因组 DNA 为模板; 35S-5泳道为以 35S-5父本基因组为模板。 L131泳道为以 L131母本基因组为模板; Π316泳道为以 L131 x35S-6杂交 基因组 DNA为模板; 35S-6泳道为以 35S-6父本基因 组为模板。 L198泳道为以 L198母本基因组为模板; fl 987泳道为以 L198x35S-7杂交 代 基因组 DNA为模板; 35S-7泳道为以 35S-4父本基因组 DNA为模板。 扩增母本基因组所用 引物序列如 SEQ ID NO.40和 SEQ ID NO. 41所示, 目标片段为 creint重组酶基因。 扩增父本 基因组所用引物序列如 SEQ ID N0.42和 SEQ ID NO. 43所示, 目标片段为 LhG4ATO转录激 活因子基因。扩增杂交后代基因组所用引物为以上两对引物。从图中可见在杂交后代中均未 检测到来自母本 creint重组酶基因和来自父本 LhG4ATO转录激活因子基因的存在。 图 18为 pL22720CN与 pL35SLhG4亲本杂交 代中残余 T-DNA片段测序结果图。 将图 16中扩增得到的约 0.8kb的残余片段进行测序分析。 结果显示, 所有外源基因均 被删除,最后在基因组上只留下一个 UT12和 xp识别位点序列以及 T-DNA片段上的一段 非功能性片段。 粗箭头示识别位点序列的方向 (5'→3')。 发明的具体实施方式 The M lane is the DNA molecule marker. The 2272-1 1 lane uses the 2272-1 1 maternal genome as a template; the Ω7115 lane uses 2272-11 X35S-5 hybrid F, and the genomic DNA is used as a template; the 35S-5 lane uses the 35S-5 paternal genome as a template. . The L79 lane uses the L79 maternal genome as a template; f795 is a hybrid of L79x35S-5! The generation of genomic DNA is a template; the 35S-5 lane is a template of the 35S-5 paternal genome. The L131 lane uses the L131 maternal genome as a template; the Π316 lane uses the L131 x35S-6 hybrid genomic DNA as a template; and the 35S-6 lane uses the 35S-6 paternal genome as a template. The L198 lane uses the L198 maternal genome as a template; the fl 987 lane uses the L198x35S-7 hybrid generation genomic DNA as a template; and the 35S-7 lane uses the 35S-4 paternal genomic DNA as a template. The primer sequences used to amplify the maternal genome are shown in SEQ ID NO. 40 and SEQ ID NO. 41, and the target fragment is the cre int recombinase gene. The primer sequences used for amplification of the paternal genome are shown in SEQ ID N0.42 and SEQ ID NO. 43, and the target fragment is the LhG4 ATO transcriptional activator gene. The primers used to amplify the hybrid progeny genome are the above two pairs of primers. It can be seen from the figure that the presence of the parental cre int recombinase gene and the parental LhG4 ATO transcriptional activator gene was not detected in the progeny of the hybrid. Figure 18 is a graph showing the results of sequencing of residual T-DNA fragments in the hybridization of pL22720CN and pL35SLhG4 parents. The about 0.8 kb residual fragment amplified in Figure 16 was subjected to sequencing analysis. The results showed that all foreign genes were deleted, and finally only one UT12 and xp recognition site sequence and one non-functional fragment on the T-DNA fragment were left on the genome. The thick arrow indicates the direction of the sequence of recognition sites (5'→3'). DETAILED DESCRIPTION OF THE INVENTION
以下结合附图对本发明进行进一步的详细说明, 但以下说明并不对本发明进行限定, 任 何对本发明的变形和改变, 只要不脱离本发明的精神, 均应属于本发明所附权利要求所定义 的范围。  The present invention will be further described in detail with reference to the accompanying drawings, which are not to be construed as limited by the accompanying claims. range.
本发明实施例中的试剂药品未做具体说明的均为普通市售,材料方法未做具体说明的均 参考 《分子克隆实验指南》 (Sambrook and Lasel, 2002)。  The reagents and drugs in the examples of the present invention are not generally described in the general market, and the material methods are not specifically described. Reference is made to the Guide to Molecular Cloning (Sambrook and Lasel, 2002).
【实施例 1】 DNA的提取和目的片段序列的 PCR扩增  [Example 1] DNA extraction and PCR amplification of the target fragment sequence
1 . DNA的提取  1. DNA extraction
选取烟草幼嫩叶 0.3-0.5g, 在液氮中迅速磨成白色粉末, 转入 lOmL离心管, 加入 3 mL 65 °C预热的 DNA提取缓冲液, 快速振荡混匀。 65°C水浴 45 min, 期间混匀 2-3次。 然后加 Λ 1 mL 5 mol/L KAc, 冰浴 20 min。 用等体积 (4mL)的氯仿: 异戊醇 (24: 1)抽提 1次 (10,000 r/min, 25°C离心 10 min)。 取上清, 加入 2/3倍体积的 -20°C预冷异丙醇, 混匀, 室温静置约 30 mine 挑出絮状沉淀, 用 75%的乙醇反复漂洗两次, 再用无水乙醇漂洗 1次。 室温吹干, 重悬于 600 L TE中。 加入 1 L RNaseA (10 mg/mL), 37°C处理 1 h去除样品中的 RNA。 再 用酚 (Ph8.0): 氯仿: 异戊醇 (25:24:1)和氯仿: 异戊醇 (24:1)各抽提 1 次 (10,000 r/min, 离心 10 min), 取上清, 2.5倍体积无水乙醇于 -20Ό沉淀 30min以上。 13,000 r/min, 离心 10 min 收集沉淀, 弃上清, 沉淀用 75%的乙醇漂洗。 减压离心干燥, 沉淀最终溶于 50-200 μL TE 中, -20 °C保存备用。  Select 0.3-0.5g of young leaves of tobacco, quickly grind it into white powder in liquid nitrogen, transfer to lOmL centrifuge tube, add 3 mL of pre-warmed DNA extraction buffer at 65 °C, and mix gently by shaking. Mix in a 65 ° C water bath for 45 min, mixing 2-3 times. Then add 1 mL of 5 mol/L KAc and ice bath for 20 min. It was extracted once with an equal volume (4 mL) of chloroform:isoamyl alcohol (24:1) (10,000 r/min, centrifuged at 25 ° C for 10 min). Take the supernatant, add 2/3 volume of -20 ° C pre-cooled isopropanol, mix, rest at room temperature for about 30 min, pick up the flocculent precipitate, rinse twice with 75% ethanol, then use anhydrous Rinse with ethanol once. Dry at room temperature and resuspend in 600 L TE. 1 L RNaseA (10 mg/mL) was added and treated at 37 ° C for 1 h to remove RNA from the sample. Re-use phenol (Ph8.0): chloroform: isoamyl alcohol (25:24:1) and chloroform: isoamyl alcohol (24:1) for each extraction (10,000 r / min, centrifugation for 10 min), take Clear, 2.5 times the volume of absolute ethanol precipitated at -20 Torr for more than 30 min. The pellet was collected at 13,000 r/min, centrifuged for 10 min, the supernatant was discarded, and the pellet was rinsed with 75% ethanol. After centrifugation under reduced pressure, the precipitate was finally dissolved in 50-200 μL of TE and stored at -20 °C until use.
2. 目的片段序列的 PCR扩增  2. PCR amplification of the sequence of the target fragment
1 OxEx PCR buffer (Mg2+ free) 2.5 μΐ, 1 OxEx PCR buffer (Mg 2+ free) 2.5 μΐ,
2.5 mmol/L dNTPs 2 μL  2.5 mmol/L dNTPs 2 μL
25 mmol/L MgCl2 2 μL 25 mmol/L MgCl 2 2 μL
上游引物 (5 μπιοΙ/L) 1 μL  Upstream primer (5 μπιοΙ/L) 1 μL
下游引物 (5 μιηοΙ/L) 1 μL  Downstream primer (5 μιηοΙ/L) 1 μL
Ex Taq DNA聚合酶 1 U  Ex Taq DNA Polymerase 1 U
DNA 约 20 ng  DNA about 20 ng
25 的扩增体系  25 amplification system
扩增程序为: 94°C, 5 min; 94°C, 30 sec, 56°C, 30 sec, 72°C, l〜4 min, 35个循环; 2°C延伸 10 min。  The amplification procedure was: 94 ° C, 5 min; 94 ° C, 30 sec, 56 ° C, 30 sec, 72 ° C, l ~ 4 min, 35 cycles; 2 ° C extension for 10 min.
3. DNA片段回收, 连接, 转化大肠杆菌 DH5a 紫外灯下,用洁净的刀片切下含目的片段的琼脂糖凝胶块。回收方法参照试剂盒(Roche 公司) 的使用说明书。 回收片段在琼脂糖凝胶上电泳定量。 3. DNA fragment recovery, ligation, transformation of E. coli DH5a Under a UV lamp, cut the agarose gel block containing the desired fragment with a clean blade. Refer to the instruction manual of the kit (Roche) for the recovery method. The recovered fragments were quantified by electrophoresis on an agarose gel.
酶切体系的建立和反应条件均参考 Roche公司限制性内切酶试剂盒的说明书进行。酶切 回收的片段, 或者扩增获得的回收片段按连接酶试剂盒说明书克隆到 pUCm-T (上海 Sarigon) 或 pGEM-T/pGEM-T Easy(Promega)载体上。 连接反应体系如下:  The establishment of the restriction enzyme system and the reaction conditions were carried out in accordance with the instructions of the Roche restriction endonuclease kit. The recovered fragment, or the amplified fragment obtained by amplification, was cloned into pUCm-T (Shanghai Sarigon) or pGEM-T/pGEM-T Easy (Promega) vector according to the ligase kit instructions. The reaction system is as follows:
10xT4 DNA连接缓冲液 1  10xT4 DNA Ligation Buffer 1
载体 DNA片段 1 (50ng)  Vector DNA fragment 1 (50ng)
外源连接产物 DNA片段 1  Exogenous ligation product DNA fragment 1
Τ4 DNA连接酶 1  Τ4 DNA ligase 1
用双蒸水补足 10 的连接体系  Replenishing 10 connection system with double distilled water
载体 DNA片段与外源连接产物 DNA片段摩尔比 =1 :3。  The molar ratio of the vector DNA fragment to the exogenous ligation product DNA fragment was 1:1.
16°C连接 2-8h。 之后将连接产物转化大肠杆菌 DH¾感受态细胞, 37Ό培养。  Connect at 16 °C for 2-8h. The ligation product was then transformed into E. coli DH3⁄4 competent cells and cultured at 37 F.
【实施例 2】双元表达载体的构建  [Example 2] Construction of binary expression vector
1. pOp/LhG4转录激活系统的获得  1. Acquisition of pOp/LhG4 transcriptional activation system
1.1 ρθρ靶标启动子的克隆  1.1 Cloning of the ρθρ target promoter
根据 pH-pOp(A) (Moore et al., 2006)质粒上 ? O 启动子序列设计一对引物(如 SEQ ID NO. 1和 SEQ ID NO. 2所示), PCR扩增得到 5'末端和 3'末端分别含有 H «dIII和 Xbal内切酶识 别位点序列的 ρθρ启动子, T 克隆到 pGEM-T-easy载体上, 得到 pGEM-t-pOp载体。 测序 确认。  A pair of primers (shown as SEQ ID NO. 1 and SEQ ID NO. 2) were designed based on the pH-pOp(A) (Moore et al., 2006) plasmid on the O promoter sequence, and the 5' end was amplified by PCR. And the ρθρ promoter containing the H «dIII and Xbal endonuclease recognition site sequences at the 3' end, respectively, and T was cloned into the pGEM-T-easy vector to obtain the pGEM-t-pOp vector. Sequencing confirmed.
1.2 转录激活因子基因的克隆  1.2 Cloning of transcriptional activator genes
根据 pBIN-LR-LhGR2(Craft et al., 2005; Samalova et al., 2005)质粒上的 (? 基因序列 设计一对引物 (如 SEQ ID N0.3和 SEQ ID NO. 4所示), PCR扩增获得 5'末端和 3'末端分别 含有 和 ·¾/Ι内切酶识别位点序列的 Z/zG^170基因, T克隆到 pUCm-T载体上, 得到 pUCm-t-LhG4ATO载体。 测序确认。 According to the pBIN-LR-LhGR 2 (Craft et al., 2005; Samalova et al., 2005), a pair of primers (as shown in SEQ ID N0.3 and SEQ ID NO. 4) were designed on the plasmid (?). The Z/zG^ 170 gene containing the sequence of the 3' end and the 3' end, respectively, was amplified by PCR and cloned into the pUCm-T vector to obtain the pUCm-t-LhG4 ATO vector. Sequencing confirmed.
2. 含有植物来源内含子的 ere重组酶基因的人工合成  2. Artificial synthesis of the ere recombinase gene containing plant-derived introns
根据植物基因组中内含子边界保守序列特点,将来源于 pCAMBIAl 305.1 载体 ( GenBank 登录号: AF354045.1 ) 上 基因中的内含子 (catalase intron)插入到 ere重组酶基因编码 Glnl44/Vall45氨酸残基的密码子之间。 为此, 分别用引物对 c-5F/c-5R (如 SEQ ID N0.5和 SEQ ID NO. 6所示)、 c-3F/c-3R (如 SEQ ID NO.7和 SEQ ID N0.8所示) 和 int-L/int-R (如 SEQ ID NO.9和 SEQ ID NO. 10所示) 扩增得到 c 重组酶基因 5'端 432 bp长的碱基序列 cre-5、 3'端 589 bp长的碱基序列 cre-3以及 190 bp长的 catalase intron。 然后, cre-5与 intron 进行平末端连接反应, 再以此反应液为模板, 用05?/^1-1 引物扩增得到长约600 1¾)大小的 cre-5+int片段。 再将该片段与 cre-3相连, 用 c-5F/c-3R扩增得到长约 1.2 kb的 cr^"'基因片 段。 最后, 回收 1.2 kb长的 ere'"'片段, 克隆后测序分析得到了第 432和 433位碱基之间含 有 catalase intron内含子的 Cre重组酶基因, 命名为 crein', 如 SEQ ID NO.11所示。 3. 携带有 loxp-CaMV35S:GFP-MCS-35S:bar-loxp的双元表达载体 p/oxpGMB/ox 的构建 首先, 构建含有 GFP报告基因的 CaMV35S-GFP-nos表达元件。 根据 pCAMBIA 1305.1 ( GenBank登录号: AF354045.1 )载体上 GUS基因上游的 Ca 35S启动子的序列设计一对 引物(如 SEQ ID N0.12和 SEQ ID NO. 13所示), PCR扩增, 并在 C¾ 35S启动子 3 '端引 入 Bg!ll内切酶识别位点。 根据 pCAMBIA4956:ETl 5(Johnson et al., 2005)载体上 mGFP-er基 因 (本发明简称为 " GFP " )的序列设计特异引物(如 SEQ ID N0.14和 SEQ ID NO. 15所示), 两条引物的 5'末端分别加上 Bamlll和 Nhe\酶识别位点;以及该载体上 GFP基因下游 l OOObp 的序列(包括丽终止序列),设计引物 nos-up/nos-down (如 SEQ ID NO.16和 SEQ ID NO. 17 所示),并在前者 5'末端引入 Spel酶识别位点。 PCR扩增以上目的片段, T-cloning到 pUCm-T (上海生工生物技术有限公司) 载体上, 分别得到 pUCm-T-CaMV35S, pUCm-T-GFP 和 pUCm-T-nos中间载体。 测序确认。 在此基础上, 用 BamHVNhel将 GFP从 pUCm-T-GFP切 下, S/7eI/H/wiin将画从 pUCm-T-nos上切下,两者与 ¾/II/H/mim酶切的 pUCm-T-CaMV35S 载体相连, 得到 pUC-CaMV35S-GFP-nos, 该载体含有 CaMV35S-GFP-nos表达元件(如图 1 所示)。 备用。 The intron (catalase intron) derived from the gene on the pCAMBIAl 305.1 vector (GenBank accession number: AF354045.1) was inserted into the ere recombinase gene encoding Glnl44/Vall45 acid according to the conserved sequence of the intron boundary in the plant genome. Between the codons of the residues. For this, primer pairs c-5F/c-5R (as shown in SEQ ID N0.5 and SEQ ID NO. 6), c-3F/c-3R (such as SEQ ID NO. 7 and SEQ ID NO. 8) and int-L/int-R (as shown in SEQ ID NO. 9 and SEQ ID NO. 10) were amplified to obtain the base sequence cre-5, 3 of the 5' end of the c recombinase gene of 432 bp. 'End 589 bp long base sequence cre-3 and 190 bp long catalase intron. Then, cre-5 intron and blunt end ligation reaction, and then this reaction solution as a template, with 05? / ^ 1-1 primers to give about 600 1¾) size cre-5 + int fragments. The fragment was ligated to cre-3, and a 1.2 kb cr^" gene fragment was amplified by c-5F/c-3R. Finally, a 1.2 kb long ere'" fragment was recovered and sequenced after cloning. The Cre recombinase gene containing the catalase intron intron between bases 432 and 433 was obtained and designated cre in ' as shown in SEQ ID NO. 3. Construction of binary expression vector p/oxpGMB/ox carrying loxp-CaMV35S:GFP-MCS-35S:bar-loxp First, a CaMV35S-GFP-nos expression element containing a GFP reporter gene was constructed. A pair of primers (shown as SEQ ID N0.12 and SEQ ID NO. 13) were designed according to the sequence of the Ca 35S promoter upstream of the GUS gene on the vector of pCAMBIA 1305.1 (GenBank accession number: AF354045.1), PCR amplified, and A Bg!ll endonuclease recognition site was introduced at the 3' end of the C3⁄4 35S promoter. Specific primers (shown as SEQ ID N0.14 and SEQ ID NO. 15) were designed according to the sequence of the mGFP-er gene (abbreviated as "GFP" in the present invention) on the vector of pCAMBIA4956: ETl 5 (Johnson et al., 2005). The Bamlll and Nhe\enzyme recognition sites were added to the 5' ends of the two primers; and the sequence of Deutsch bp downstream of the GFP gene (including the GFP termination sequence) was designed, and the primer nos-up/nos-down was designed (such as SEQ ID). NO. 16 and SEQ ID NO. 17), and a Spel enzyme recognition site was introduced at the 5' end of the former. The above target fragment was PCR-amplified, and T-cloning was applied to pUCm-T (Shanghai Shenggong Biotechnology Co., Ltd.) vector to obtain pUCm-T-CaMV35S, pUCm-T-GFP and pUCm-T-nos intermediate vectors, respectively. Sequencing confirmed. On this basis, GFP was excised from pUCm-T-GFP using BamHVNhel, and S/7eI/H/wiin was excised from pUCm-T-nos, both of which were digested with 3⁄4/II/H/mim. The pUCm-T-CaMV35S vector was ligated to obtain pUC-CaMV35S-GFP-nos, which contained the CaMV35S-GFP-nos expression element (as shown in Figure 1). spare.
其次, 构建含有抗除草剂基因 bar的 35S-bar-nos表达元件。 首先, 用 Hz'mmi/EcoRI将 Next, a 35S-bar-nos expression element containing a herbicide resistant gene bar was constructed. First, use Hz'mmi/EcoRI
35S-GUS-nos元件从 pBI 121 ( GenBank登录号: AF485783.1 ) 载体上切下, 连入经相同酶切 处理的 pUCm-T载体上, 得到 pUC-35S-GUS-nos载体。 然后, 根据 pFGC5941 ( Genbank登 录号: AY31090U )载体上抗除草剂基因 bar的序列设计一对引物(如 SEQ ID NO.18和 SEQ ID NO. 19所示), PCR扩增获得 5'和 3 '端分别带有 Spe\和 d的 bar基因, T-cloning到 pUCm-T载体上, 测序确认。 S/?d/ d将 bar基因从该载体上切下, 连入经 Xbal/Sacl酶处 理的 pUC-35S-GUS-nos载体上,得到 pUC-35S-bar-nos载体。然后,再用 Sacl酶消化该载体, 并补平粘端, 环化载体, 从而消掉 bar和 nos之间的《¾d内切酶识别位点 (如图 2所示)。 备用。 The 35S-GUS-nos element was excised from pBI 121 (GenBank accession number: AF485783.1) and ligated into the pUCm-T vector which was subjected to the same digestion to obtain pUC-35S-GUS-nos vector. Then, a pair of primers (as shown in SEQ ID NO. 18 and SEQ ID NO. 19) were designed according to the sequence of the herbicide resistance gene bar on the vector pFGC5941 (Genbank accession number: AY31090U), and 5' and 3' were obtained by PCR amplification. The bar genes with Spe\ and d, respectively, were T-cloning onto the pUCm-T vector and confirmed by sequencing. The bar gene was excised from the vector by S/?d/d, and ligated into the pUC-35S-GUS-nos vector treated with Xbal/Sacl enzyme to obtain a pUC-35S-bar-nos vector. Then, the vector was digested with Sacl enzyme, and the sticky ends were filled in, and the vector was cyclized to eliminate the 3⁄4d endonuclease recognition site between bar and nos (as shown in Fig. 2). spare.
然后, pBS-spacer载体的构建。用 HindlWEcoRI从 pCAMBIA4956:ET15载体上将约 2.4 kb的 spacer序列(非功能序列)切下, 插入经相同酶处理的 pBluescript SK(pBS) ( Genbank 登录号: X52328.1 ) 载体上, 得到 pBS-spacer载体, 以备用 (如图 3所示)。  Then, the construction of the pBS-spacer vector. A 2.4 kb spacer sequence (non-functional sequence) was excised from the pCAMBIA4956:ET15 vector by HindlWEcoRI, and inserted into the pBluescript SK (pBS) (Genbank accession number: X52328.1) vector treated with the same enzyme to obtain pBS-spacer. Carrier, spare (as shown in Figure 3).
最后,根据 hxp识别位点序列和 CaMV35S-GFP-nos元件序列设计一对引物(如 SEQ ID NO.20和 SEQ ID NO. 21所示), 其中引物 1的 5'端含有 34 bp长的 loxp, 3'端与 CaMV 35S 启动子 5'端匹配, 引物 2与 nos 的 3'端互补。 以 pUC-CaMV35S-GFP-nos质粒为模板, PCR 扩增得到 loxp-CaMV35S-GFP-nos元件。 同样, 以 pUC-35S-bar-nos质粒为模板, 用一对引 物(如 SEQ ID N0.22和 SEQ ID NO. 23所示)扩增得到 loxp-35S-bar-nos元件。 这两条片段 的 5'端都添加了 Cre重组酶的识别位点 hxp。 将以上片段 T-cloning到 pUCm-T载体上, 测 序确认。 首先用 SacVKpnl 从中 间载体 pUC-loxp-CaMV35S-GFP-nos 上切下 loxp-CaMV35S-GFP-nos元件, 连入经相同酶处理的 pBIN 19 ( Genbank登录号: U09365.1 ) 载体中, 得到 pLoxp-GFP 中间载体。 然后, hol/Xbal 酶将 loxp-35S-bar-nos 元件从 pUC-loxp-35S-bar-nos 载体上切下, 并与 SaWNhel 酶消化的 pLoxp-GFP 载体相连, 产生 p ocpGBZrap中间载体。 最后, ^ZwI/ /wI酶切 pBS-spacer载体, 并补平 Qwl粘端, 回收 spacer片段, 同时, S lAY^I酶切 p£ox GB ox ?载体, 与 spacer片段连接, 产生植物表达 载体 p xpGMWoxp。 其中, 在 GFP和 Bar表达元件之间插入了 2.4 kb的间隔序列, 间隔序 列两端含有多克隆位点。 这样, 包括多克隆位点 MCS在内的所有外源基因片段均位于 识别位点序列之间 (如图 4所示)。 Finally, a pair of primers (shown as SEQ ID NO. 20 and SEQ ID NO. 21) were designed based on the hxp recognition site sequence and the CaMV35S-GFP-nos element sequence, wherein the 5' end of primer 1 contains a 34 bp long loxp. The 3' end is matched to the 5' end of the CaMV 35S promoter, and the primer 2 is complementary to the 3' end of the nos. The loxp-CaMV35S-GFP-nos element was amplified by PCR using the pUC-CaMV35S-GFP-nos plasmid as a template. Similarly, using the pUC-35S-bar-nos plasmid as a template, a pair of primers (as shown in SEQ ID N0.22 and SEQ ID NO. 23) was used to amplify the loxp-35S-bar-nos element. The recognition site hxp of Cre recombinase was added to the 5' end of both fragments. The above fragment was T-cloning onto the pUCm-T vector and confirmed by sequencing. First, the loxp-CaMV35S-GFP-nos element was excised from the intermediate vector pUC-loxp-CaMV35S-GFP-nos by SacVKpnl, and ligated into the same enzyme-treated pBIN 19 (Genbank accession number: U09365.1) vector to obtain pLoxp. - GFP intermediate vector. Then, the hol/Xbal enzyme will take the loxp-35S-bar-nos component from The pUC-loxp-35S-bar-nos vector was excised and ligated with the SaWNhel digested pLoxp-GFP vector to generate the p ocpGBZrap intermediate vector. Finally, ^ZwI/ /wI digested the pBS-spacer vector, and filled the Qwl sticky end, and recovered the spacer fragment. At the same time, S lAY^I cut the p£ox GB ox ? vector and ligated with the spacer fragment to produce a plant expression vector. p xpGMWoxp. Among them, a 2.4 kb spacer sequence was inserted between the GFP and Bar expression elements, and a multiple cloning site was included at both ends of the spacer sequence. Thus, all exogenous gene fragments, including the multiple cloning site MCS, are located between the recognition site sequences (as shown in Figure 4).
4. 含有 lox2272-CaMV35S:GFP-MCS-35S:bar-lox2272 元件 的双元表达载体 plox2272GMNlox2272的构建  4. Construction of binary expression vector containing plox2272GMNlox2272 containing lox2272-CaMV35S:GFP-MCS-35S:bar-lox2272 element
相似的, 根据 Ιοχ2272 识别位点序列和 CaMV35S-GFP-nos 元件序列设计一对引物 (如 SEQ ID N0.24和 SEQ ID NO. 25所示), pUC-CaMV35S-GFP-nos质粒为模板, PCR扩增得 到 lox2272-CaMV35S-GFP-nos元件。 同样, 以 pBIN 19 植物表达载体为模板, 用一对引物 (如 SEQ ID NO.26和 SEQ ID NO. 27所示) 扩增得到 Iox2272 -nosP-NPTII-nos元件。 这两 条片段的 5'端都添加了 Cre重组酶的识别位点序列 10x2272。将以上片段 T-doning到 pUCm-T 载体上, 测序确认。 用 Xhol/Xbal 酶切 pUC-lox2272(-nosP-NPTII-nos 载体, 回收 lox2272-nosP-NPTII-nos片段, 与 SaWNhe\处理的 pBIN 19载体相连, 得到 plox2272-NPTII 中 间载体。 然后 , Sacl/Xbal 酶切 , 回收该载体。 同 时, Sacl/Kpnl 酶切 pUC-lox2272-CaMV35S-GFP-nos载体,回收 lox2272-CaMV35S-GFP-nos片段,以及 KpnVXbal 酶切 pBS-spacer , 回收 spacer 片段, 将回收的三个片段连接, 就得到植物表达载体 p/o 2272GMN/o 2272„同样,包括多克隆位点 MCS在内的所有外源基因片段均位于 Ιοχ22Ί2 识别位点序列之间 (如图 5所示)。  Similarly, a pair of primers (shown as SEQ ID N0.24 and SEQ ID NO. 25) were designed based on the Ιοχ2272 recognition site sequence and the CaMV35S-GFP-nos element sequence, pUC-CaMV35S-GFP-nos plasmid was used as a template, PCR The lox2272-CaMV35S-GFP-nos element was amplified. Similarly, the IBIN2272-nosP-NPTII-nos element was amplified using a pair of primers (shown as SEQ ID NO. 26 and SEQ ID NO. 27) using the pBIN 19 plant expression vector as a template. The recognition site sequence of Cre Recombinase 10x2272 was added to the 5' end of both fragments. The above fragment was T-donated onto the pUCm-T vector and confirmed by sequencing. The pUC-lox2272 (-nosP-NPTII-nos vector was digested with Xhol/Xbal, and the lox2272-nosP-NPTII-nos fragment was recovered and ligated with the Savon Nhe\treated pBIN 19 vector to obtain the plox2272-NPTII intermediate vector. Then, Sacl/Xbal The vector was recovered by restriction enzyme digestion. At the same time, Sacl/Kpnl digested the pUC-lox2272-CaMV35S-GFP-nos vector, recovered the lox2272-CaMV35S-GFP-nos fragment, and KpnVXbal digested the pBS-spacer, and recovered the spacer fragment, which was recovered. The three fragments were ligated to obtain the plant expression vector p/o 2272GMN/o 2272. Similarly, all exogenous gene fragments including the multiple cloning site MCS were located between the Ιοχ22Ί2 recognition site sequences (as shown in Figure 5). .
5. 含有 loxp-CaMV35S:GUS:NPTII-MCS-loxp的双元载体 p£ox/?GN-MCS的构建 为了将 /ox/7识别位点加入到 2xCaU5S启动子上游, 根据 pCAMBIA1305.1载体中的 l^CaMV 35S启动子序列设计一对引物 (如 SEQ ID N0.28和 SEQ ID NO. 2 所示), 以 pCAMBIA1305.1质粒为模板, PCR扩增得到 loxp-2xCaMV35S元件。 同样的, 以 pBIN 19 载体上的謹序列设计一对引物 (如 SEQ ID NO.30和 SEQ ID NO. 31所示, 以 pBIN 19质粒 为模板, PCR扩增得到 nos-loxp元件。 这样, 就将 loxp识别位点序列添加到 nos序列的 3' 端。 T-cloning到 pGEM-T-easy载体上,得到 pGEM-T-nos-loxp中间载体。测序确认。 Sad/EcoRI 酶切 pGEM-t-nos-loxp中间载体, 回收 nos-loxp元件, 连入经相同酶处理的 pBIN19载体中, 产生 pBIN-loxp-nos 中间载体。 其次, 用 BamHVSan 酶将 GUS:NPTII-nos 元件从 pSackiss-35S-GUS:NPTII-nos载体上切下, 与经 ¾/ΠΑ¾/Ι酶处理过的 pGEM小 loxp-35S载体 相连, 得到 pUC-loxp-35S-GUS:NPTn-nos克隆载体。 最后, 用 HiVjdlll/ zd酶消化该载体, 回收 loxp-35S-GUS:NPTII-nos 片段, 与经相同酶处理过的 pBIN-loxp-nos 载体相连, 得到 p/^xpGN-MCS载体。在该载体中, GUS、 ΝΡΤΠ以及多克隆位点 MCS均位于一对同向识别 位点序列 loxp之间 (如图 6所示)。  5. Construction of the binary vector p£ox/?GN-MCS containing loxp-CaMV35S:GUS:NPTII-MCS-loxp in order to add the /ox/7 recognition site upstream of the 2xCaU5S promoter, according to the pCAMBIA1305.1 vector The l^CaMV 35S promoter sequence was designed to design a pair of primers (as shown in SEQ ID N0.28 and SEQ ID NO. 2), and the pCAMBIA1305.1 plasmid was used as a template to obtain a loxp-2xCaMV35S element by PCR amplification. Similarly, a pair of primers were designed with the sequence of the pBIN 19 vector (as shown in SEQ ID NO. 30 and SEQ ID NO. 31, and the pBIN 19 plasmid was used as a template to PCR-amplify the nos-loxp element. Thus, The loxp recognition site sequence was added to the 3' end of the nos sequence. T-cloning onto the pGEM-T-easy vector to obtain the pGEM-T-nos-loxp intermediate vector. Sequencing confirmed. Sad/EcoRI digestion pGEM-t- The nos-loxp intermediate vector, the nos-loxp element was recovered and ligated into the pBIN19 vector treated with the same enzyme to produce the pBIN-loxp-nos intermediate vector. Secondly, the GUS:NPTII-nos element was extracted from pSackiss-35S-GUS with BamHVSan enzyme. : NPTII-nos vector was ligated and ligated with pGEM small loxp-35S vector treated with 3⁄4/ΠΑ3⁄4/Ι enzyme to obtain pUC-loxp-35S-GUS: NPTn-nos cloning vector. Finally, HiVjdlll/zd enzyme was used. The vector was digested, and the loxp-35S-GUS:NPTII-nos fragment was recovered and ligated with the same enzyme-treated pBIN-loxp-nos vector to obtain a p/^xpGN-MCS vector. In this vector, GUS, ΝΡΤΠ and The cloning loci MCS are located between a pair of co-directional recognition locus sequences (Figure 6)).
【实施例 3】植物表达载体的构建 1 . 含有 pOp reint元件的 Effector植物表达载体的构建 [Example 3] Construction of plant expression vector 1. Construction of an Effector plant expression vector containing pOp re int elements
为了构建 Effector植物表达载体,首先构建 pOp-creint-T3A表达元件。用一对引物 (如 SEQ ID N0.32和 SEQ ID NO. 33所示)从 pER8载体上扩增得到终止序列 T3A, 其 5'端引入 JiTwI 内切酶识别位点, T-cloning到 pUCm-T载体上, 产生 pUC-T-T3A载体。 测序确认。 然后, Sacl/Xbal将 ρθρ启动子从 pGEM-T-pOp载体上切下,^¾οΙ/¾/Π将 Τ3Α终止序列从 pUC小 Τ3 A 载体切下, XbaVSdl将 cremt基因从 pUC-T-Creint载体上切下, 三个片段共同连入 SacVBglll 消化过的 pUC载体上, 得到 PUC-pOp-Creint-T3A载体, 该载体含有 pOp-Creint-T3A表达元 件。 To construct an Effector plant expression vector, the pOp-cre int- T3A expression element was first constructed. A pair of primers (shown as SEQ ID N0.32 and SEQ ID NO. 33) were amplified from the pER8 vector to obtain the terminator sequence T3A, which introduced the JiTwI endonuclease recognition site at the 5' end, T-cloning to pUCm- On the T vector, a pUC-T-T3A vector was produced. Sequencing confirmed. Then, Sacl/Xbal cuts the ρθρ promoter from the pGEM-T-pOp vector, and the Τ3Α termination sequence is excised from the pUC Τ3 A vector, and XbaVSdl cre mt gene from pUC-T-Cre The int vector was excised and the three fragments were ligated into the SacVBglll-digested pUC vector to obtain a P UC-pOp-Cre int -T3A vector containing the pOp-Cre int -T3A expression element.
最后, 用 Hi"dll腿 ol将 pOp-Creint-T3A表达元件切下, 分别连入 ώ HindUl/Xhol消化 处理的 p xpGMB!oxp和 p/ox2272GMN/ox2272植物表达载体中, 产生相应的 Effector植物 表达载体 pLOCB和 pL22720CN (图 7, 8 )。 Finally, the pOp-Cre int -T3A expression elements were excised with Hi"dll leg ol and ligated into the HindUl/Xhol digested p xpGMB!oxp and p/ox2272GMN/ox2272 plant expression vectors, respectively, to generate the corresponding Effector plants. The expression vectors pLOCB and pL22720CN (Fig. 7, 8).
2. 含有 35S:LhG4ATO元件的 Activator植物表达载体 pL35SLhG4的构建 2. Construction of Activator plant expression vector pL35SLhG4 containing 35S:LhG4 ATO element
首先构建 LhG4ATO-T3A元件,用 wHIA¾/I将 ZJJG^^基因从 pUCm-t-LhG4ATO载体上 切下, XhoVKpnl将 T3A (pea 3A )转录终止序列从 pER8载体(Genbank登录号: AF309825.2 ) 上切下, 将两者连入 amHI/ /wI酶处理的 pBS载体上, 得到 pBS-LhG4ATO-T3A, 该载体含 有 LhG4ATO-T3A 元件。 然后, 用 Kpnl/Baml 将该元件切下, San/B imHl 从 pSackiss-35S-mcs-nos载体上切下 35S启动子, 将 J55 "启动子和 LhG4ATO-T3A元件一并连入 用 SaWKpnl酶处理过的 p£ojf/7GN-MCS载体中, 得到 pL35SLhG4植物表达载体 (如图 9所 示)。 First, the LhG4 ATO- T3A element was constructed, and the ZJJG^^ gene was excised from the pUCm-t-LhG4 ATO vector by wHIA3⁄4/I. XhoVKpnl used the T3A (pea 3A) transcription termination sequence from the pER8 vector (Genbank accession number: AF309825.2) The upper cut was ligated into the amHI/ /wI enzyme-treated pBS vector to obtain pBS-LhG4 ATO- T3A, which contained the LhG4 ATO- T3A element. Then, the element was excised with Kpnl/Baml, San/B imHl was cleaved from the pSackiss-35S-mcs-nos vector, and the 35S promoter was ligated, and the J55 "promoter and LhG4 ATO- T3A elements were ligated together with the SaWKpnl enzyme. In the treated p£ojf/7GN-MCS vector, a pL35SLhG4 plant expression vector (shown in Figure 9) was obtained.
【实施例 4】 表达载体的转化  [Example 4] Transformation of expression vector
1. 用电激法将构建的植物表达载体质粒导入农杆菌 EHA105中。  1. The constructed plant expression vector plasmid was introduced into Agrobacterium EHA105 by electroporation.
参考 Bio-RAD MicroPulser 用户说明书, 将上述载体通过电激转化法导入农杆菌 EHA105。  The above vector was introduced into Agrobacterium EHA105 by electroporation using the Bio-RAD MicroPulser User's Manual.
2. GAEBS系统的 Effector和 Activator元件整合到烟草基因组  2. The Effector and Activator components of the GAEBS system are integrated into the tobacco genome
通过根癌农杆菌介导的方法进行烟草的遗传转化  Genetic transformation of tobacco by Agrobacterium tumefaciens-mediated methods
表 1 : 根癌农杆菌介导的烟草遗传转化用培养基  Table 1: Agrobacterium tumefaciens-mediated medium for tobacco genetic transformation
培养基名称 成分  Medium name
基本培养基 (MSB ) MSB ( MS无机盐 +B5有机) Basic medium (MSB) MSB (MS inorganic salt + B5 organic)
种子萌发培养 (MSB0 ) MSB+30g/L葡萄糖 +7.5 g/L琼脂, pH5.8 Seed germination culture (MSB0) MSB+30g/L glucose +7.5 g/L agar, pH 5.8
共培养培养 (MSB1 ) MSB+2.0mg/L 6-BA+0.5mg/L IAA+6g/L琼月旨,, pH5.8 筛选培养基 (MSB2 ) MSB+2.0mg/L 6-BA+0.5mg/L IAA +200mg/L Cef+ 50mg/L Co-culture (MSB1) MSB+2.0mg/L 6-BA+0.5mg/L IAA+6g/L Qiongyue, pH5.8 Screening medium (MSB2) MSB+2.0mg/L 6-BA+0.5 Mg/L IAA +200mg/L Cef+ 50mg/L
Kan+6g/L琼脂, pH5.8  Kan+6g/L agar, pH 5.8
诱芽培养基 (MSB3 ) MSB+200mg/L Cef+ 50mg/L Kan+6g/L琼脂, pH5.8 生根培养基 (MSB4) MSB+200mg/L Cef+6g/L琼脂, pH5.8 Inducing medium (MSB3) MSB+200mg/L Cef+ 50mg/L Kan+6g/L agar, pH5.8 Rooting medium (MSB4) MSB+200mg/L Cef+6g/L agar, pH5.8
MS: Murashige & Skoog, 1962 B5: Gamborg, 1986 MS: Murashige & Skoog, 1962 B5: Gamborg, 1986
上述的表达载体通过农杆菌介导叶盘的方法导入烟草。 具体方法如下:  The above expression vector is introduced into tobacco by a method of Agrobacterium-mediated leaf disc. The specific method is as follows:
烟草种子用 1%的次氯酸钠消毒后,在固体培养基 MSBc上萌发,培养条件为 25°C、 16 hr 光照 /8 hr黑暗的光周期。 约一个月后生长健壮的无菌苗即可用作转化外植体。  Tobacco seeds were sterilized with 1% sodium hypochlorite and germinated on solid medium MSBc under the conditions of 25 ° C, 16 hr light / 8 hr dark photoperiod. A sterile sterile seedling that grows about one month later can be used as a transformed explant.
选取健壮叶片, 超净工作台上切成约 0.5cmx0.5Cm 的叶盘, 保持湿润备用。 牙签挑取 YEB平板上培养的转化用农杆菌单菌落,液体培养活化,再转入三角瓶中培养至 OD6( ) = 0.5。 把切好的叶盘浸泡于 MSB液体基本培养基重悬的农杆菌菌液中, 静止浸染 10-20 min。倾去 菌液, 用无菌的吸水纸吸去叶盘表面多余的菌液, 将叶盘接入共培养基 MSB!上, 24 Ό暗培 养 2 d。共培养完成后,将叶盘接入筛选培养基 MSB2中进行分化培养 2周,培养条件为 25°C、 16 hr光照 /8 hr黑暗的光周期。 出现再生绿色愈伤后, 转入诱芽培养基 MSB3促进芽的产生。 当抗性苗生长到 3-4 cm长时, 切下转入生根培养基 MSB4中, 诱导生根。 当抗性苗的根生长 到 2-3 cm长时, 洗净培养基, 并水培炼苗 2-3d, 移栽到营养钵中, 于温室生长。 获得的转 基因烟草在表型和生长发育上与野生型的对照没有明显区别。 Select robust blade, cut into about clean table leaf discs 0.5cmx0.5 C m, moist standby. The toothpick picks up the Agrobacterium single colony cultured on the YEB plate, activates the liquid culture, and then transfers it to a flask to grow to OD 6 ( ) = 0.5. The cut leaf discs were immersed in the Agrobacterium liquid suspension resuspended in MSB liquid basic medium, and immersed for 10-20 min. The bacterial liquid was decanted, and the excess bacterial liquid on the surface of the leaf disc was aspirated with a sterile absorbent paper, and the leaf disc was placed on the co-culture medium MSB!, and cultured for 24 days in the dark. After the completion of the co-cultivation, the leaf discs were subjected to differentiation culture in the screening medium MSB 2 for 2 weeks under the conditions of 25 ° C, 16 hr light / 8 hr dark photoperiod. After the regenerating green callus appeared, transfer to the bud medium MSB 3 to promote bud production. When the resistant seedlings grow to 3-4 cm in length, they are cut into rooting medium MSB 4 to induce rooting. When the roots of the resistant seedlings grow to 2-3 cm long, the medium is washed, and the hydroponic seedlings are 2-3 days, transplanted into nutrient mash, and grown in a greenhouse. The obtained transgenic tobacco was not significantly different in phenotype and growth development from the wild type control.
【实施例 5】转基因植株的筛选  [Example 5] Screening of transgenic plants
1. Effector转基因烟草植株的获得  1. Effector's acquisition of transgenic tobacco plants
由于 Effector载体中含有绿色荧光蛋白 GF 报告基因, 因此, 对经过 PPT (pLOCB ) 和 Km(pL22720CN)抗性筛选得到的烟草再生植株, 在荧光体视显微镜下检测了植株叶片等 组织中 GF 的表达情况。 转基因烟草的 GFP 绿色荧光鉴定参见 Haseloff 所述 (Haseloff, 1999)。 采摘抗性苗的叶片, 在 Olympus SZX-ILLB2-200体视荧光显微镜成像系统 (R本) 下观察烟草的绿色荧光信号 (激发波峰是 488 nm ,发射波峰是 520 nm), 并照相记录。 如图 10A,B所示,转基因烟草叶片和根均可检测到绿色荧光信号, 而对照没有检测到任何的绿色 荧光信号, 只呈现叶绿素的红色荧光信号。 其中, 对照植株 (CK) 根的荧光显著减弱。 根 据以上观察结果, 以抗性苗叶片呈现均一的绿色荧光信号为标准筛选 Effector转基因植株。  Since the Effector vector contains the green fluorescent protein GF reporter gene, the expression of GF in the leaves of plants and other tissues was detected by fluorescence stereomicroscope in tobacco regenerated plants screened by PPT (pLOCB) and Km (pL22720CN). Happening. GFP green fluorescence identification of transgenic tobacco is described in Haseloff (Haseloff, 1999). The leaves of the resistant seedlings were harvested and the green fluorescence signal of the tobacco (the excitation peak was 488 nm and the emission peak was 520 nm) was observed under an Olympus SZX-ILLB2-200 stereofluorescence imaging system (R) and photographed. As shown in Fig. 10A, B, the green fluorescent signal was detected in both the leaves and roots of the transgenic tobacco, while the control did not detect any green fluorescent signal and only showed the red fluorescent signal of chlorophyll. Among them, the fluorescence of the control plant (CK) root was significantly weakened. Based on the above observations, the effector transgenic plants were screened by the uniform green fluorescent signal of the resistant seedling leaves.
对 GFP阳性植株, 进一歩用 PCR验证了外源基因的整合。 如图 10C-D所示, 在所有呈 现绿色荧光信号的转基因烟草中都检测到了约 0.8 kb pOp-Creint的特异片段, 说明这些 GFP 阳性植株确实为转基因植株 (如图 10中 C,D所示)。所用引物为序列如 SEQ ID N0.34和 SEQ ID NO. 35所示。 For GFP-positive plants, the integration of foreign genes was verified by PCR. As shown in Fig. 10C-D, specific fragments of about 0.8 kb pOp-Cre int were detected in all transgenic tobaccos displaying green fluorescent signals, indicating that these GFP-positive plants were indeed transgenic plants (Fig. 10, C, D). Show). The primers used are shown in the sequences as SEQ ID N0.34 and SEQ ID NO.
2. Activator转基因烟草植株的获得  2. Acquisition of Activator transgenic tobacco plants
由于 Activator载体中含有 Gf/S报告基因。 因此, 首先用 GUS组织化学染色法对抗性 苗染色。 GUS组织染色的方法参见 Jefferson 等 (1987)的方法。 主要过程如下:  Because the Activator vector contains the Gf/S reporter gene. Therefore, the resistant seedlings were first stained by GUS histochemical staining. For the method of GUS tissue staining, see the method of Jefferson et al. (1987). The main process is as follows:
将转基因植物材料 (叶片、 茎、 根等) 切成薄片, 放入新鲜配置的 X-Gluc染色液中, 37°C保温卜 12h。 待充分染色后, 用 75% (v/v) 乙醇脱色 2~3次, 至对照材料 (野生型植 物) 呈白色。 并进行体视镜下的观察和照相。 如图 11A, B, 转基因植株的根、 茎、 叶均呈 现强烈的 GUS蓝色, 而非转基因植株组织未见蓝色。 然后, 利用 PCR进一步鉴定 GUS染 色呈蓝色的转基因植株中外源基因的整合。 结果表明在 GUS染色呈蓝色的转基因植株中均 检测到了 1.4 kb 35S-LhG4ATO的特异条带 (如图 11 中 C所示)。 所用引物为序列如 SEQ ID N0.36和 SEQ ID NO. 37所示。 The transgenic plant material (leaf, stem, root, etc.) was cut into thin slices, placed in a freshly prepared X-Gluc staining solution, and incubated at 37 ° C for 12 h. After sufficient staining, it was destained 2 to 3 times with 75% (v/v) ethanol until the control material (wild type plant) was white. And under the stereoscopic observation and photography. As shown in Fig. 11A, B, the roots, stems and leaves of the transgenic plants showed strong GUS blue, while the non-transgenic plants showed no blue color. Then, PCR was used to further identify the integration of foreign genes in transgenic plants with GUS staining in blue. The results showed that all of the transgenic plants with GUS staining were blue. A specific band of 1.4 kb 35S-LhG4 ATO was detected (shown as C in Figure 11). The primers used are shown in the sequences as SEQ ID N0.36 and SEQ ID NO.
【实施例 6】外源基因在 Effector转基因植株有性世代中遗传稳定性的分析  [Example 6] Analysis of genetic stability of foreign genes in sexual generation of Effector transgenic plants
在 150ml 三角瓶中加入适量的 To代种子, 然后加入约 30mL自来水, 110rpm, 26°C震 荡培养 5-7d。待两片真叶完全展开后,在荧光体视显微镜下分别统计显绿色荧光(GFP+) 和 不显绿色荧光 (GFF) 幼苗的数量。 然后根据单基因 3:1和双基因 15:1的孟德尔遗传规律, 对所得数据进行 Xc2 分析
Figure imgf000018_0001
( Ο 代表观察次数, Ε代表理论次数): 2 ^ =3.84。 根据表 3.2的统计结果, 在分析的 33株 Effector转基因植物中, 除 L178转基 因植株的外源基因拷贝数不确定外, 有 16个转基因植株的外源基因分离比符合 3:1, 其余转 基因植株均符合 15:1 的分离比, 没有发现分离比不符合 3: 1或 15:1的现象。 这些结果说明 在 pLOCB和 pL22720CN转基因植株的有性繁殖世代中, ρθρ启动子能高效维持重组酶基 因的沉默, 保持外源基因在有性世代中的稳定遗传。
An appropriate amount of To seeds was added to a 150 ml flask, and then about 30 mL of tap water was added, and the mixture was shaken at 26 rpm for 5-7 days at 26 °C. After the two true leaves were fully expanded, the number of green fluorescent (GFP + ) and non-green fluorescent (GFF) seedlings was counted under a fluorescence stereo microscope. Then, according to the Mendelian inheritance rule of single gene 3:1 and double gene 15:1, Xc 2 analysis was performed on the obtained data.
Figure imgf000018_0001
( Ο represents the number of observations, Ε represents the theoretical number of times): 2 ^ = 3.84. According to the statistical results in Table 3.2, in the 33 affectedfector plants analyzed, except for the copy number of the foreign gene of the L178 transgenic plants, the ratio of the exogenous genes of 16 transgenic plants was 3:1, and the remaining transgenic plants were selected. Both of them met the separation ratio of 15:1, and the separation ratio did not match the phenomenon of 3:1 or 15:1. These results indicate that in the sexual reproduction of pLOCB and pL22720CN transgenic plants, the ρθρ promoter can efficiently maintain the recombination of the recombinase gene and maintain the stable inheritance of the exogenous gene in sexual generation.
¾_2转基因 pLOCB和 pL22720CN烟草中外 基因拷贝数的分析  Analysis of Gene Copy Numbers in 3⁄4_2 Transgenic pLOCB and pL22720CN Tobacco
载体 转基因 检测的 GFP 阳性 GFP 阴性 分离比例 2  Vector transgenic assay GFP positive GFP negative separation ratio 2
A c 植株 总种子数 种子数 种子数  A c plant total seed number seed number seed number
pLOCB L13 310 227 83 3:1 0.11  pLOCB L13 310 227 83 3:1 0.11
L18 395 297 98 3:1 0.00 L18 395 297 98 3:1 0.00
L19 407 296 111 3:1 0.25L19 407 296 111 3:1 0.25
L30 276 196 80 3:1 0.53L30 276 196 80 3:1 0.53
L79 176 134 42 3:1 0.02L79 176 134 42 3:1 0.02
L91 330 244 86 3:1 0.04L91 330 244 86 3:1 0.04
L102 371 271 100 3:1 0.16L102 371 271 100 3:1 0.16
L122 157 150 7 15:1 0.04L122 157 150 7 15:1 0.04
L131 390 296 94 3:1 0.03L131 390 296 94 3:1 0.03
L133 279 211 68 3:1 0.01L133 279 211 68 3:1 0.01
L136 196 188 8 15:1 0.08L136 196 188 8 15:1 0.08
L155 170 125 45 3:1 0.03L155 170 125 45 3:1 0.03
L168 434 407 27 15:1 0.00L168 434 407 27 15:1 0.00
L173 179 168 11 15:1 0.00L173 179 168 11 15:1 0.00
L174 243 179 64 3: 1 0.04L174 243 179 64 3: 1 0.04
L175 291 221 70 3:1 0.02L175 291 221 70 3:1 0.02
L178 502 502 0 - -L178 502 502 0 - -
L179 250 241 9 15:1 0.16L179 250 241 9 15:1 0.16
L194 220 219 1 15:1 0.73 L198 297 228 69 3:1 0.10L194 220 219 1 15:1 0.73 L198 297 228 69 3:1 0.10
L210 273 212 61 3:1 0.22L210 273 212 61 3:1 0.22
L211 320 230 90 3:1 0.38L211 320 230 90 3:1 0.38
L213 369 366 3 15:1 1.11L213 369 366 3 15:1 1.11
L220 253 195 58 3:1 0.12L220 253 195 58 3:1 0.12
2272-1 312 234 78 3:1 0.002272-1 312 234 78 3:1 0.00
2272-2 328 248 80 3:1 0.012272-2 328 248 80 3:1 0.01
2272-3 280 216 64 3:1 0.142272-3 280 216 64 3:1 0.14
2272-4 298 272 26 15:1 0.17 pL22720CN 2272-5 270 255 15 15:1 0.01 2272-4 298 272 26 15:1 0.17 pL22720CN 2272-5 270 255 15 15:1 0.01
2272-6 300 224 76 3:1 0.00 2272-6 300 224 76 3:1 0.00
2272-10 213 203 10 15:1 0.042272-10 213 203 10 15:1 0.04
2272-11 286 216 70 3:1 0.012272-11 286 216 70 3:1 0.01
2272-12 375 282 93 3:1 0.00 2272-12 375 282 93 3:1 0.00
【实施例 7】 单拷贝转基因植株的筛选 [Example 7] Screening of single copy transgenic plants
为了便于分析杂交后 GAEBS系统删除外源基因的效率和特点, 本研究参照实施例六的 方法筛选单考贝转基因植株用于杂交试验。 对 Effector转基因植物拷贝数的分析主要检测自 交 代幼苗中 GFP绿色荧光的分离情况,初歩确定转基因 pLOCB和 pL22720CN的单拷贝 植株。从表 2可以看出绝大部分转基因植株都是单拷贝和双拷贝植株, 其中单拷贝转基因植 株 pLOCB有 16株, pL22720CN有 6株。  In order to facilitate the analysis of the efficiency and characteristics of the deletion of the foreign gene in the GAEBS system after hybridization, the single-cury transgenic plants were screened for hybridization experiments by the method of Example 6. The analysis of the copy number of the Effector transgenic plants mainly detected the isolation of GFP green fluorescence in the self-crossing seedlings, and the single-copy plants of the transgenic pLOCB and pL22720CN were initially identified. It can be seen from Table 2 that most of the transgenic plants are single-copy and double-copy plants, of which 16 are single-copy transgenic plants and 6 are pL22720CN.
而对转基因 pL35SLhG4烟草, 对幼苗进行 GUS 组织染色分析, 统计蓝色 (GUS+) 和 白色 (GUS—) 幼苗的数量。 通过分析自交 TV代中 Gt/S基因的分离比来确定单拷贝植株。 表 3显示所分析的 6个转化子均为单拷贝转基因植株。  For the transgenic pL35SLhG4 tobacco, GUS tissue staining analysis was performed on the seedlings, and the number of blue (GUS+) and white (GUS-) seedlings was counted. Single-copy plants were identified by analyzing the isolation ratio of the Gt/S gene in the self-crossing TV generation. Table 3 shows that the six transformants analyzed were single copy transgenic plants.
表 3转基因 PL35SLhG4烟草中外源基因拷贝数的分析 Table 3 Analysis of foreign gene copy number in transgenic P L35SLhG4 tobacco
载体 转基因 检测 GFP阳性 GFP阴性 分离比例 Xc2  Vector transgene detection GFP positive GFP negative separation ratio Xc2
植株 总种子数 种子数 种子数  Plant total seed number seed number seed number
35S-4 318 234 84 3:1 0.07 35S-4 318 234 84 3:1 0.07
35S-5 346 247 99 3:1 0.5535S-5 346 247 99 3:1 0.55
35S-6 344 260 84 3:1 0.01 pL35SLhG4 35S-6 344 260 84 3:1 0.01 pL35SLhG4
35S-7 538 378 160 3:1 1.55 35S-7 538 378 160 3:1 1.55
35S-9 484 360 124 3:1 0.0235S-9 484 360 124 3:1 0.02
35S-13 283 210 73 3:1 0.0135S-13 283 210 73 3:1 0.01
'To代种子中 GUS染色呈蓝色的种子对孟德尔分离比适合度的检测。 如果: GUS ( + ) : GUS (-) 符合 3:1, 即为单拷贝; 如果符合 15:1, 即为双拷贝。 The detection of the suitability of the Mendelian separation ratio in the 'To generation seed' in which the GUS stained blue. If: GUS ( + ) : GUS (-) meets 3:1, which is a single copy; if it meets 15:1, it is a double copy.
【实施例 8】 转基因烟草的杂交试验 杂交方法参见刘仁祥等 (2000)所述, 在烟草盛花期, 每天下午采集第 2 天要裂开的花药 存于实验室, 待第 2 天早上, 花药已裂幵, 拿到田间用毛笔粘取花粉涂于要授粉的柱头 (去 雄蕊)上, 即完成授粉过程。 [Example 8] Hybridization test of transgenic tobacco For the hybridization method, see Liu Renxiang et al. (2000). During the flowering period of tobacco, the anthers to be split on the second day of the afternoon are stored in the laboratory. After the morning of the second day, the anthers have been split, and the field is picked up with a brush. The pollen is applied to the stigma (to the stamen) to be pollinated, and the pollination process is completed.
【实施例 9】 GAEBS系统通过杂交途径删除外源基因效率的分析  [Example 9] Analysis of the efficiency of deleting foreign genes by hybridization pathway of GAEBS system
1.GAEBS系统能 100%同时将来源于双亲的外源基因从杂交后代中删除  1. The GAEBS system can simultaneously remove foreign genes derived from both parents from the hybrid progeny.
根据孟德尔遗传规律, To代 pLOCB (母本) 与 PL35SLhG4 (父本)转基因杂交后代种子中只 有四分之一的合子同时含有 pLOCB和 pL35SLhG4转基因, 因此, 删除只可能发生在这些 合子及其产生的植株中。 根据杂交后代中 GFP和 GUS的表达活性, 如果外源基因在杂交后 代种子中被完全删除, 将产生三种表型: GFP+/ GUS -、 GFP-/GUS+和 -/- (外源基因被彻底删 除的植株); 如果删除不彻底, 有可能产生第四种表型: GFP+/GUS+。 因此, 首先对杂交后 代幼苗进行 GFP和 GUS活性检测, 确定杂交后代幼苗的表型, 并统计不同表型的幼苗数。 然后, 根据孟德尔遗传规律计算基因自动删除系统通过杂交途径删除外源基因的效率。在本 研究中, 分别用 GFT和 Gf/ 报告基因被删除的效率来评价系统对 Effector和 Activator元件 的删除效率。 统计结果见表 4和表 5。 According to the Mendelian inheritance law, only one quarter of the progeny of the To-generation pLOCB (parent) and P L35SLhG4 (parental) transgenic hybrids contain both the pLOCB and pL35SLhG4 transgenes. Therefore, deletions only occur in these zygotes and Produced in the plant. According to the expression activity of GFP and GUS in the hybrid progeny, if the foreign gene is completely deleted in the hybrid progeny seed, three phenotypes will be produced: GFP+/GUS-, GFP-/GUS+ and -/- (the foreign gene is completely The deleted plant); if the deletion is not complete, it is possible to produce a fourth phenotype: GFP+/GUS+. Therefore, the GFP and GUS activities of the hybrid progeny seedlings were first tested to determine the phenotype of the hybrid progeny seedlings, and the number of seedlings of different phenotypes was counted. Then, according to the Mendelian inheritance law, the efficiency of the gene deletion system to delete the foreign gene through the hybridization pathway is calculated. In the present study, the efficiency of deletion of the Effector and Activator elements was evaluated using the efficiency of deletion of GFT and Gf/reporter genes, respectively. The statistical results are shown in Tables 4 and 5.
随机选出 35S-4和 35S-13转化子分别与不同的 pLOCB独立转化子杂交,统计系统在这些杂 交组合中删除外源基因的平均效率 (系统删除 Effector和 Activator效率的平均值)。 如图 12 所示, 35S-4与 L13、 L19、 L79、 L91、 L102、 L13 K L198和 L213转基因植株的杂交组合 中, 系统在杂交种子中删除外源基因的效率在 23%-100%之间; 同样, 35S-13与上述 10个 pLOCB 转基因植株的杂交后代中, 系统删除外源基因的效率在 31 %-100%之间。 用同一株 pLOCB植株分别与不同的 pL35SLhG4转基因植株杂交, 比较系统在这些杂交组合中删除外 源基因的效率, 结果显示在 L91、 L79、 L131和 L213分别与 5株 PL35SLhG4独立转基因植 株的杂交组合中, 系统的删除效率分别为: 23%-49%、 83%-100%、 91 %-100%和36%-50%。 其中, L198与 5株 pL35SLhG4转基因植株杂交,系统的删除效率均为 100% (如图 13所示)。 从以上结果可以看出, 系统在不同的 pLOCB转基因植株之间删除外源基因的效率差异比较 明显; 而同一 pLOCB转基因植株与不同的 pL35SLhG4杂交后,系统删除外源基因的效率比 较稳定。 因此, 相对于 Activator而言, Effector在基因组中的插入位置是影响系统删除效率 的一个关键因素。 The 35S-4 and 35S-13 transformants were randomly selected to hybridize with different pLOCB independent transformants, respectively, and the statistical system removed the average efficiency of the foreign genes in these hybrid combinations (the system removed the average of the Efficiency and Activator efficiencies). As shown in Figure 12, in the hybrid combination of 35S-4 with L13, L19, L79, L91, L102, L13 K L198 and L213 transgenic plants, the efficiency of deleting the foreign gene in the hybrid seed is 23%-100%. Similarly, in the hybrid progeny of 35S-13 and the above 10 pLOCB transgenic plants, the efficiency of systematic deletion of the exogenous gene was between 31% and 100%. The same strain of pLOCB was crossed with different pL35SLhG4 transgenic plants, and the efficiency of deleting the exogenous gene in these hybrid combinations was compared. The results showed that the hybrid combinations of L91, L79, L131 and L213 with 5 P L35SLhG4 independent transgenic plants, respectively. Among them, the system removal efficiency is: 23%-49%, 83%-100%, 91%-100% and 36%-50%. Among them, L198 hybridized with 5 transgenic plants of pL35SLhG4, the deletion efficiency of the system was 100% (as shown in Figure 13). From the above results, it can be seen that the efficiency of deleting exogenous genes between different pLOCB transgenic plants is more obvious; while the same pLOCB transgenic plants hybridize with different pL35SLhG4, the efficiency of deleting exogenous genes is relatively stable. Therefore, relative to the Activator, the insertion position of the Effector in the genome is a key factor affecting the efficiency of system deletion.
利用相似的方法, 分析了系统在 pL22720CN与 pL35SLhG4的杂交后代中删除外源基 因的效率, 结果如图 14所示。 9株 pL22720CN植株作为母本分别与 35S-4父本杂交, 统计 系统在这些杂交组合中删除外源基因的平均效率。 从图 11 中可以看出, 系统的删除效率在 20%-100%之间。 其中, 2272-4x35S-4和 2272-l l x35S-4两个组合中删除效率均达到 100%。 然而当将 2272-4和 2272-11植株分别与其他 pL35SLhG4转基因植株 (如 35S-5、 35S-6和 35S-7 ) 杂交时, 系统在种子中删除外源基因的平均效率均没达到 100% (表 5)。 从表 5可 以看出, 在分析的 9个 pL22720CN Effector中, 没有得到能与不同 Activator杂交而系统删 除外源基因的效率均为 100%的转化子。比较而言, 2272-1、 2272-3、 2272-4、 2273-6、 2272-11 和 2272-12都是比较高效的应答子, 删除效率在 88%以上。 Using a similar method, the efficiency of deletion of the foreign gene in the hybrid progeny of pL22720CN and pL35SLhG4 was analyzed. The results are shown in Fig. 14. Nine strains of pL22720CN were crossed as maternal counterparts with the 35S-4 male parent, and the statistical system removed the average efficiency of the foreign gene in these hybrid combinations. As can be seen from Figure 11, the system's removal efficiency is between 20% and 100%. Among them, the removal efficiency of the two combinations of 2272-4x35S-4 and 2272-ll x35S-4 reached 100%. However, when 2272-4 and 2272-11 plants were crossed with other pL35SLhG4 transgenic plants (such as 35S-5, 35S-6 and 35S-7), the average efficiency of deleting exogenous genes in the seeds did not reach 100%. (table 5). As can be seen from Table 5, in the 9 pL22720CN Effectors analyzed, no transformants capable of hybridizing with different Activators and systematically deleting the foreign genes were 100%. In comparison, 2272-1, 2272-3, 2272-4, 2273-6, 2272-11 Both 2272-12 and the 2272-12 are relatively efficient responders with a deletion efficiency of over 88%.
总之, 在 35个杂交组合中, 系统在 8个组合中删除 Effector和 Activator外源基因的效 率均同时达到 100%。 其中, L198植株与 5株不同的 pL35SLhG4杂交后, 系统在杂交后代 中删除外源基因的效率均达到 100%。这些结果表明, GAEBS系统能同时将来源于双亲不同 染色体上的所有外源基因从合子中高效删除, 删除效率高达 100%。  In summary, in the 35 cross combinations, the system removed the Effector and Activator exogenous genes in both combinations at an efficiency of 100%. Among them, after the L198 plants were crossed with 5 different pL35SLhG4, the efficiency of deleting the foreign genes in the hybrid progeny reached 100%. These results indicate that the GAEBS system can efficiently delete all foreign genes from different chromosomes of the parents from the zygote, and the deletion efficiency is as high as 100%.
表 4 To代转基因 pLOCB与 PL35SLhG4杂交种中系统删除效率的统计分析 Table 4 Statistical analysis of system deletion efficiency in To-transgenic pLOCB and P L35SLhG4 hybrids
杂交 分析的 GFP+苗数 / GUS+苗数 / aG+G+苗数 '删除 Hybrid analysis of GFP+ seedlings / GUS + number of seedlings / a G+G + number of seedlings 'delete
芽总数 GFP-苗数 GUS—苗数 GFP 和 GUS  Total number of buds GFP-number of seedlings GUS - number of seedlings GFP and GUS
基因的效率 (%) Gene efficiency (%)
35S-4xL13 384 144/240 169/215 69 1 1.75/2.64 50/035S-4xL13 384 144/240 169/215 69 1 1.75/2.64 50/0
35S-4xL19 299 82/217 148/151 9 30.03/0.01 90/035S-4xL19 299 82/217 148/151 9 30.03/0.01 90/0
35S-4xL79 278 73/205 45/233 0 30.87/62.89 95/10035S-4xL79 278 73/205 45/233 0 30.87/62.89 95/100
35S-4xL91 281 72/209 159/122 2 32.91/2.31 98/035S-4xL91 281 72/209 159/122 2 32.91/2.31 98/0
35S-4xL102 377 87/290 129/248 3 54.12/18.47 100/6335S-4xL102 377 87/290 129/248 3 54.12/18.47 100/63
35S-4xL131 448 109/339 1 14/334 0 58.53/53.53 100/9835S-4xL131 448 109/339 1 14/334 0 58.53/53.53 100/98
35S-4xL174 398 160/238 156/242 3 7.45/9.08 39/4335S-4xL174 398 160/238 156/242 3 7.45/9.08 39/43
35S-4xL198 160 38/122 16/144 0 21.53/50.4 100/10035S-4xL198 160 38/122 16/144 0 21.53/50.4 100/100
35S-4xL213 195 61/134 84/1 1 1 0 13.29/1.73 75/035S-4xL213 195 61/134 84/1 1 1 0 13.29/1.73 75/0
35S-4xL220 189 73/1 16 86/103 50 4.67/0.68 46/035S-4xL220 189 73/1 16 86/103 50 4.67/0.68 46/0
L13x35S-13 106 33/73 50/56 17 7.17/0.12 75/0L13x35S-13 106 33/73 50/56 17 7.17/0.12 75/0
L19x35S-13 234 55/179 1 19/1 15 0 32.33/0.02 100/0L19x35S-13 234 55/179 1 19/1 15 0 32.33/0.02 100/0
L79x35S-13 194 48/146 47/147 0 24.25/25.26 100/100L79x35S-13 194 48/146 47/147 0 24.25/25.26 100/100
L91 x35S-13 246 76/170 108/138 4 17.58/1.71 76/0L91 x35S-13 246 76/170 108/138 4 17.58/1.71 76/0
L102x35S-13 291 75/216 120/171 0 33.68/4.3 97/35L102x35S-13 291 75/216 120/171 0 33.68/4.3 97/35
L131 x35S-13 352 86/266 89/263 0 45.51/42.51 100/99L131 x35S-13 352 86/266 89/263 0 45.51/42.51 100/99
L174x35S-13 298 123/175 1 19/179 40 4.36/5.84 35/40L174x35S-13 298 123/175 1 19/179 40 4.36/5.84 35/40
L198x35S-13 328 77/251 77/251 0 45.62/45.62 100/100L198x35S-13 328 77/251 77/251 0 45.62/45.62 100/100
L213x35S-13 78 25/53 42/36 6 4.67/0.16 72/0L213x35S-13 78 25/53 42/36 6 4.67/0.16 72/0
L220x35S-13 260 72/188 124/136 60 25.43/0.23 89/0L220x35S-13 260 72/188 124/136 60 25.43/0.23 89/0
L131 x35S-6 280 66/214 51/229 0 38.59/55.94 100/100L131 x35S-6 280 66/214 51/229 0 38.59/55.94 100/100
L131 x35S-7 375 97/278 107/268 2 43.20/34.13 97/86L131 x35S-7 375 97/278 107/268 2 43.20/34.13 97/86
35S-5xL131 423 1 12/31 1 1 15/308 0 46.34/43.57 94/9135S-5xL131 423 1 12/31 1 1 15/308 0 46.34/43.57 94/91
35S-6xL198 284 71/213 51/233 0 35.00/57.68 100/10035S-6xL198 284 71/213 51/233 0 35.00/57.68 100/100
L198x35S-5 447 102/345 78/369 0 65.51/94.07 100/100L198x35S-5 447 102/345 78/369 0 65.51/94.07 100/100
L198x35S-7 570 129/441 132/438 0 84.84/81.6 100/100L198x35S-7 570 129/441 132/438 0 84.84/81.6 100/100
L79x35S-7 256 76/180 74/178 4 20.72/22.36 81/84 L79x35S-6 221 56/165 67/154 10 26.39/16.73 99/79L79x35S-7 256 76/180 74/178 4 20.72/22.36 81/84 L79x35S-6 221 56/165 67/154 10 26.39/16.73 99/79
L79x35S-5 208 48/160 45/163 0 29.62/39.91 100/100L79x35S-5 208 48/160 45/163 0 29.62/39.91 100/100
L213x35S-7 377 137/240 139/238 4 13.8/12.7 55/53L213x35S-7 377 137/240 139/238 4 13.8/12.7 55/53
35S-6xL213 274 67/207 124/150 1 35.26/1.14 100/035S-6xL213 274 67/207 124/150 1 35.26/1.14 100/0
35S-5xL213 249 58/191 118/131 2 34.99/0.29 100/035S-5xL213 249 58/191 118/131 2 34.99/0.29 100/0
35S-5xL91 227 87/140 118/109 32 5.96/0.14 47/035S-5xL91 227 87/140 118/109 32 5.96/0.14 47/0
L91 x35S-7 208 58/150 96/112 16 19.91/0.54 88/0L91 x35S-7 208 58/150 96/112 16 19.91/0.54 88/0
35S-6xL91 78 25/53 42/36 6 4.67/0.16 72/035S-6xL91 78 25/53 42/36 6 4.67/0.16 72/0
L131 pLGN 293 133/160 129/164 50 1.15/1.97 0/0L131 pLGN 293 133/160 129/164 50 1.15/1.97 0/0
L198xpLGN 230 100/130 100/130 40 1.83/1.83 0/0 pLGBx35S-5 220 106/1 14 102/118 49 0.14/0.14 0/0 pLGBx35S-7 294 130/164 124/170 50 1.85/3.44 0/0L198xpLGN 230 100/130 100/130 40 1.83/1.83 0/0 pLGBx35S-5 220 106/1 14 102/118 49 0.14/0.14 0/0 pLGBx35S-7 294 130/164 124/170 50 1.85/3.44 0/0
'GFP和 GUS检测均呈阳性的幼苗。 b r -∑U ( O代表观察次数, E代表理论次数): ^。 5 3.84。 如果没有删除发 Seedlings that tested positive for both GFP and GUS. b r -∑ U (O stands for the number of observations, E stands for the theoretical number of times): ^. 5 3.84. If you do not delete the hair
E '  E '
生, 杂交 幼苗中 GUS (+): GUS ( -) =1 : 1 以及 GFP ( + ): GFP ( -) =1 : 1。 χ,2指 GFP 阳性幼苗对 1 : 1比例的适合性检测。 Χ22指 GUS阳性幼苗对 1 : 1比例的适合性检测。 GUS (+): GUS (-) =1 : 1 and GFP ( + ): GFP ( -) =1 : 1 in the hybrid seedlings. χ, 2 refers to the suitability of GFP-positive seedlings for a 1:1 ratio. Χ2 2 refers to the suitability of GUS-positive seedlings for a ratio of 1:1.
e只有当 χ2大于 3.84时, 才分别估测 ^和(^7 外源基因被删除的效率。 双亲均为单拷贝 时: 删除效率按如下公式计算 Deletion efficiency (%) =[(4xG"-2xT)/T] l00o 对于一方亲 本转基因 pLOCB为双拷贝时, GFP外源基因删除的效率按如下公式计算 Deletion efficiency ( % ) =[2xG7T]x l00。 G—指 GFP或 GUS阴性幼苗, T指分析的幼苗总数。 e Only when χ 2 is greater than 3.84, the efficiency of deletion of ^ and (7) foreign genes is estimated separately. When both parents are single copies: The deletion efficiency is calculated according to the following formula: Deletion efficiency (%) = [(4xG"- 2xT)/T] l00o For a parental transgenic pLOCB double copy, the efficiency of GFP exogenous gene deletion is calculated as follows: Deletion efficiency (%) = [2xG7T] x l00. G - refers to GFP or GUS negative seedlings, T refers The total number of seedlings analyzed.
表 5 To代转基因 pL22720CN与 pL35SLhG4杂交种中外源基因删除效率的统计分析 杂交 分析的 GFP+苗数 / GUS+苗数 / aG+G+ V/Z22 e删除 GFP和 芽总数 GFF苗数 GUS—苗数 苗数 GUS基因 的效率(%)Table 5 Statistical analysis of exogenous gene deletion efficiency in To-transgenic transgenic pL22720CN and pL35SLhG4 hybrids GFP+ seedling number/GUS+ seedling number of hybridization analysis/ a G+G + V/Z2 2 e deletion of GFP and total number of buds GFF seedlings GUS-miao The efficiency of the number of seedlings GUS gene (%)
2272-1 X35S-4 274 85/189 69/205 10 19.36/33.26 76 /992272-1 X35S-4 274 85/189 69/205 10 19.36/33.26 76 /99
2272-2x35S-4 238 70/168 63/175 0 19.77/25.88 82 /942272-2x35S-4 238 70/168 63/175 0 19.77/25.88 82 /94
2272-3x35S-4 226 58/168 50/176 1 26.29/34.57 97/1002272-3x35S-4 226 58/168 50/176 1 26.29/34.57 97/100
2272-4x35S-4 260 40/220 40/220 0 61.62/61.62 100/1002272-4x35S-4 260 40/220 40/220 0 61.62/61.62 100/100
2272-5x35S-4 217 87/130 102/115 42 4.06/0.33 40 /02272-5x35S-4 217 87/130 102/115 42 4.06/0.33 40 /0
2272-6x35S-4 276 72/204 62/214 1 31.09/41.31 96/1002272-6x35S-4 276 72/204 62/214 1 31.09/41.31 96/100
2272-10x35S-4 235 91/144 47/188 0 5.75 /41.70 45 /1002272-10x35S-4 235 91/144 47/188 0 5.75 /41.70 45 /100
2272-11 X35S-4 264 63/201 57/207 0 35.55/42.05 100/1002272-11 X35S-4 264 63/201 57/207 0 35.55/42.05 100/100
2272-12x35S-4 310 70/240 85/225 5 46.07/31.16 100/902272-12x35S-4 310 70/240 85/225 5 46.07/31.16 100/90
2272-3x35S-6 263 63/200 75/188 0 35.16/23.85 100/86 2272-3x35S-7 232 50/182 104/128 0 36.98 /1.14 100/02272-3x35S-6 263 63/200 75/188 0 35.16/23.85 100/86 2272-3x35S-7 232 50/182 104/128 0 36.98 /1.14 100/0
2272-4x35S-6 208 60/148 40/168 1 18.19/38.77 85/1002272-4x35S-6 208 60/148 40/168 1 18.19/38.77 85/100
2272-4x35S-5 479 157/422 106/373 0 28.08/73.86 69/1002272-4x35S-5 479 157/422 106/373 0 28.08/73.86 69/100
2272-4x35S-7 332 114/218 121/211 1 15.98/11.93 63/542272-4x35S-7 332 114/218 121/211 1 15.98/11.93 63/54
2272-6x35S-6 179 42/137 47/132 0 24.68/19.71 100/952272-6x35S-6 179 42/137 47/132 0 24.68/19.71 100/95
35S-5x2272-6 153 45/108 46/107 3 12.56/1 1.76 82/8035S-5x2272-6 153 45/108 46/107 3 12.56/1 1.76 82/80
2272-1 l x35S-6 236 56/180 72/164 0 32.0/17.54 100/782272-1 l x35S-6 236 56/180 72/164 0 32.0/17.54 100/78
2272-1 l x35S-5 328 85/243 79/249 0 37.57/43.54 96/1002272-1 l x35S-5 328 85/243 79/249 0 37.57/43.54 96/100
2272-1 l x35S-7 222 66/156 71/151 0 17.84/14.06 81/722272-1 l x35S-7 222 66/156 71/151 0 17.84/14.06 81/72
35S-7x2272-12 338 77/261 105/233 7 49.54/23.86 100/7635S-7x2272-12 338 77/261 105/233 7 49.54/23.86 100/76
2272- 12x35S-5 242 60/182 77/165 0 30.25/15.64 100/732272- 12x35S-5 242 60/182 77/165 0 30.25/15.64 100/73
2272-12x35S-6 181 44/1 37 60/121 1 23.38/9.94 100/672272-12x35S-6 181 44/1 37 60/121 1 23.38/9.94 100/67
2272- 12x35S- 13 109 3 1/78 27/82 0 9.71/13.38 86/1002272- 12x35S- 13 109 3 1/78 27/82 0 9.71/13.38 86/100
2272-5x35S-6 244 98/146 138/106 67 4.53/1.97 39/02272-5x35S-6 244 98/146 138/106 67 4.53/1.97 39/0
2272-10x35S-6 151 56/95 25/126 1 4.78/33.11 52/1002272-10x35S-6 151 56/95 25/126 1 4.78/33.11 52/100
35S-5x2272-10 370 140/230 68/302 3 10.70/73.36 49/10035S-5x2272-10 370 140/230 68/302 3 10.70/73.36 49/100
35S-7x2272-10 252 95/157 1 15/137 1 7.38/0.88 49/035S-7x2272-10 252 95/157 1 15/137 1 7.38/0.88 49/0
'GFP和 GUS检测均呈阳性的幼苗。 b ^( 2 =∑U X J ( O代表观察次数, E代表理论次数): ^。5 , =3.84。 如果没有删除发 Seedlings that tested positive for both GFP and GUS. b ^ ( 2 =∑ UXJ (O stands for observations, E stands for theoretical number of times): ^. 5 , =3.84. If not deleted
E '  E '
生, 杂交!^代幼苗中 GUS (+): GUS ( - ) =1 : 1 以及 GFP ( + ): GFP ( - ) =1 : 1。 χ,2指 GFP 阳性幼苗对 1 : 1比例的适合性检测。 Χ22指 GUS阳性幼苗对 1 : 1比例的适合性检测。 Health, hybrid! ^GUS (+): GUS ( - ) =1 : 1 and GFP ( + ): GFP ( - ) =1 : 1 in the seedlings. χ, 2 refers to the suitability of GFP-positive seedlings for a 1:1 ratio. Χ2 2 refers to the suitability of GUS-positive seedlings for a ratio of 1:1.
e只有当 χι 2和 Χ22大于 3.84时, 才分别估测 和 外源基因被删除的效率。 双亲均为 单拷贝时: 删除效率按如下公式计算 Deletion efficiency (%) =[(4xG"-2xT)/T] x l 00o 对于一 方亲本转基因 pL22720CB为双拷贝时, GFP外源基因删除的效率按如下公式计算 Deletion efficiency (%) =[2xG7T]x 100。 G 旨 GFP或 GUS阴性幼苗, T指分析的幼苗总数。 Only when χι 2 when e and Χ2 2 greater than 3.84, respectively, was estimated efficiency exogenous gene deleted. When both parents are single copy: The deletion efficiency is calculated as follows: Deletion efficiency (%) = [(4xG"-2xT)/T] xl 00 o For a parental transgene pL22720CB double copy, the efficiency of GFP exogenous gene deletion is The following formula is used to calculate the Deletion efficiency (%) = [2xG7T] x 100. G is the GFP or GUS negative seedling, and the T refers to the total number of seedlings analyzed.
2. Effector中不同识别位点序列对系统删除效率的影响  2. Effect of different recognition site sequences in Effector on system deletion efficiency
为了进一步比较 Effector中突变体 lox2272和野生型 loxp识别位点序列对基因自动删除 系统删除效率的影响, 分别统计了表 4、 5中系统对 GFP和 GUS基因的平均删除效率, 结 果如图 15所示。 以 GFP为准统计系统对 Effector的平均删除效率: pLOCBxpL35SLhG4为 85%; PL22720CNxpL35SLhG4 为 81 %。 两者没有明显的差异。 以 GUS 为准统计系统对 Activator的平均删除效率: pL22720CNxpL35SLhG4较高,为 73%;而 pLOCBxpL35SLhG4 为 48%。 从上可以看出系统对 Effector 的删除效率均高于对 Activator 的删除效率。 在 PL22720CNxpL35SLhG4系统中, 系统对含有突变体识别位点序列 (lox2272 ) Effector的删 除效率高于对含有野生型识别位点 (loxp ) Activator的删除效率, 但没有显著差异。 而在都 含有野生型识别位点的 pLOCBxpL35SLhG4 系统中, 系统对 Effector 的删除效率比对 Activator的删除效率高出 37个百分点, 两者的差异达到极显著水平 (p<0.01 )。 另外, 当将 Effector元件中 loxp识别位点替换为突变体 1οχ2272时, 可以显著提高系统对 Activator的删 除效率 (由 48%增加到 73%) (p<0.05)。 To further compare the effect of mutant lox2272 and wild-type loxp recognition site sequences in the subtractor on the deletion efficiency of the automatic deletion system, the average deletion efficiency of the GFP and GUS genes in the systems in Tables 4 and 5 were calculated. The results are shown in Figure 15. Show. The average deletion efficiency of the Effectsor system based on GFP was 85% for pLOCBxpL35SLhG4 and 81% for P L22720CNxpL35SLhG4. There is no significant difference between the two. The average deletion efficiency of Activator was based on GUS: pL22720CNxpL35SLhG4 was 73% higher, while pLOCBxpL35SLhG4 was 48%. It can be seen from the above that the removal efficiency of the system is higher than that of the Activator. In the P L22720CNxpL35SLhG4 system, the deletion efficiency of the effector containing the mutant recognition site sequence (lox2272) was higher than that of the Activator containing the wild type recognition site (loxp), but there was no significant difference. In the pLOCBxpL35SLhG4 system, which contains wild-type recognition sites, the efficiency of deletion of the system is reduced. The removal efficiency of Activator was 37% higher, and the difference between the two reached a very significant level (p<0.01). In addition, when the loxp recognition site in the Effector element was replaced with the mutant 1οχ2272, the efficiency of deletion of the Activator by the system (from 48% to 73%) was significantly improved (p<0.05).
尽管在 pLOCBxpL35SLhG4杂交组合中, 系统对 Activator的平均删除效率明显低于对 Effector的平均删除效率, 但能获得删除效率均到达 100%的 pLOCB转基因植株, 如 L198。 在所分析的 9个 pL22720CN转基因植株中没有得到删除效率均达到 100%的转基因植株。 但是, 在 pL22720CNxpL35SLhG4杂交组合中, 系统均能高效删除 Effector和 Activator, 平 均删除效率在 73%以上。 因此, pLOCBxpL35SLhG4 和 pL22720CNxpL35SLhG4是高效的 基因自动删除双元系统组合。  Although in the pLOCBxpL35SLhG4 hybrid combination, the average deletion efficiency of the Activator was significantly lower than that of the Effector, a pLOCB transgenic plant with a deletion efficiency of 100%, such as L198, was obtained. No transgenic plants with 100% deletion efficiency were obtained in the 9 pL22720CN transgenic plants analyzed. However, in the pL22720CNxpL35SLhG4 hybrid combination, the system can efficiently delete the Effector and Activator, and the average deletion efficiency is above 73%. Therefore, pLOCBxpL35SLhG4 and pL22720CNxpL35SLhG4 are efficient combinations of gene automatic deletion binary systems.
【实施例 10】 GAEBS系统删除外源 DNA片段的检测  [Example 10] Detection of exogenous DNA fragments by GAEBS system
杂交 代中外源基因删除的 PCR分析  PCR analysis of deletion of foreign genes in hybrid generation
通过转基因 pLOCB或 pL2272〇CN与 pL35SLhG4烟草杂交后代的 GFP和 GUS活性检 测己证明了 GAEBS系统能同时将来源于双亲的外源基因高效删除, 删除效率达到 100%。 为了进一歩分析系统在杂交后代删除外源基因的情况,分别提取杂交后代和杂交用亲本的基 因组 DNA, 进行 PCR分析。根据所用植物表达载体骨架 (pBIN 19) 的 T-DNA两端边界序列 与重组酶识别位点序列之间的 DNA序列设计一对引物 (如 SEQ ID N0.38和 SEQ ID N0.39 所示), 常规 PCR筛选出发生外源基因删除的植株, 如果发生了外源基因的删除, 将只检测 到约 800 bp的非功能残留片段 (如图 16A所示)。  The GFP and GUS activity assays of transgenic progeny of transgenic pLOCB or pL2272〇CN and pL35SLhG4 tobacco have demonstrated that the GAEBS system can efficiently delete foreign genes derived from both parents, and the deletion efficiency reaches 100%. In order to further analyze the system to delete the foreign gene in the hybrid generation, the genomic DNA of the hybrid progeny and the hybrid parent were extracted and PCR analysis was performed. A pair of primers (designated as SEQ ID N0.38 and SEQ ID N0.39) were designed based on the DNA sequence between the T-DNA both-end boundary sequence of the plant expression vector backbone (pBIN 19) and the recombinase recognition site sequence. Conventional PCR screens for plants with exogenous gene deletion. If deletion of the foreign gene occurs, only about 800 bp of non-functional residual fragments will be detected (as shown in Figure 16A).
对己经被确认发生外源基因删除的植株,进一歩用 PCR检测了来自双亲的外源基因 Cre'nt 和 LhG4ATO等的删除情况,其中,检测 cremt基因所用的引物如 SEQ ID NO.40和 SEQ ID N0.41 所示; 检测 LhG4ATO基因所用的引物如 8£0 10 «).42和8£0 10 > 0.43所示。 研究结果表 明在 2272-1 l x35S-5、 L79x35S-5、 L131和 L198x35S-7的杂交后代 f27115, f795 , Π316 和 f!987植株中, 来自母本的 creint基因和来自父本的 LhG4ATO基因确已从这些杂交后代 的基因组中被成功彻底删除 (如图 17所示)。 To have been confirmed plants exogenous gene deletion occurs, into a ho using PCR detected from the parents of the exogenous gene Cre 'nt and LhG4 ATO like deletion situation, wherein the detection cre mt gene primers used as SEQ ID NO. 40 and SEQ ID N0.41; primers used to detect the LhG4 ATO gene are shown as 8 £0 10 «).42 and 8 £0 10 > 0.43. The results showed that in the hybrid progeny f27115, f795, Π316 and f!987 of 2272-1 l x35S-5, L79x35S-5, L131 and L198x35S-7, the creint gene from the female parent and the LhG4ATO gene from the male parent were indeed It has been successfully removed from the genome of these hybrid progeny (as shown in Figure 17).
在此基础上, 改变扩增条件, 增加片段延伸时间, 进一步用 PCR分析外源基因发生删 除的分子特点。 所用 PCR反应条件为: 94°C 5min; 98°C lOsec; 68°C 8min, 35个循环。 DNA聚合酶为 LA Taq(TaKaRa)聚合酶。 如果发生删除, 将检测到约 800bp的非功能 T-DNA 残余片段, 否则将检测到约 7.0 kb或 /和 9.0 kb的 T-DNA大片段(如图 16中 A所示)。 从图 16B中可知, 以亲本 35S-13基因组为模板, 扩增得到一条约 7.0 kb大小的特异大片段, 该 片段包括 Loxp识别位点、 35S-GUS:NPTII-nos、 和 35S-LhG4ATO-T3A片段。 同样, 以亲本 L13基因组为模板, 扩增得到一条长约 9.0 kb的特异大片段, 该片段包括 loxp识别位点、 35S-GFP-nos、 pOp-creint-T3A 和 35S-bar-nos 片段。 而在已经确认外源基因被完全删除的 G7115, f795, fl316和 fl987植株中只检测到约 0.8kb大小的残存片段, 表明在这些植株 中来源于父本和母本中的所有外源基因被完全删除 (包括 Effector和 Activator)。 另外, 在 fl 7413植株中, 除了检测到 0.8 kb的特异条带外, 还检测到大约 7.0 kb的大片段, 该片段大 小与亲本 35S-13的一致, 说明 Activator的外源基因没有被删除; 同样在 f413植株中, 额外 检测到一条与亲本 L13大小一致的长约 9.0 kb的大片段,显示 Effector的外源基因没被删除。 这些结果从分子水平上证明了 GAEBS系统能同时将来源于双亲的所有外源功能基因从杂交 后代基因组中彻底删除。 On this basis, the amplification conditions were changed, the fragment extension time was increased, and the molecular characteristics of deletion of the foreign gene were further analyzed by PCR. The PCR reaction conditions used were: 94 ° C for 5 min; 98 ° C lOsec; 68 ° C for 8 min, 35 cycles. The DNA polymerase is LA Taq (TaKaRa) polymerase. If deletion occurs, a non-functional T-DNA residual fragment of about 800 bp will be detected, otherwise a large T-DNA fragment of about 7.0 kb or / and 9.0 kb will be detected (as shown in A of Figure 16). As can be seen from Fig. 16B, a specific large fragment of about 7.0 kb size was amplified using the parental 35S-13 genome as a template, and the fragment includes a Loxp recognition site, 35S-GUS: NPTII-nos, and 35S-LhG4ATO-T3A. Fragment. Similarly, a large 9.0 kb fragment was amplified using the parental L13 genome as a template, including the loxp recognition site, 35S-GFP-nos, pOp-creint-T3A and 35S-bar-nos fragments. Only the remaining fragments of about 0.8 kb in the G7115, f795, fl316 and fl987 plants which have been confirmed to have completely deleted the foreign gene were detected, indicating that all the foreign genes derived from the male and female in these plants were Completely removed (including Effector and Activator). In addition, in the fl 7413 plant, in addition to the detection of a specific band of 0.8 kb, a large fragment of about 7.0 kb was detected, which was large. The small agreement with the parental 35S-13 indicates that the foreign gene of Activator has not been deleted; also in the f413 plant, a large fragment of about 9.0 kb long, which is consistent with the size of the parent L13, was detected, indicating that the foreign gene of the Effector was not been deleted. These results demonstrate at the molecular level that the GAEBS system can simultaneously completely remove all exogenous functional genes derived from both parents from the hybrid progeny genome.
2. 杂交 F1代中系统删除外源基因后残余片段的序列分析  2. Sequence analysis of residual fragments after deletion of foreign genes in the F1 generation
根据 Creint/loxP系统重组原理 (Lee and Saito, 1998; Ennifar et al., 2003; Ghosh et al., 2005), 基因自动删除双元系统删除外源基因后, 将只在植物基因组上留下约 800 bp 长、 含 有一个 loxp识别位点序列的 T-DNA非功能片段 (如图 14所示)。 为了解基因自动删除双元 系统删除外源基因后残余片段的确切序列信息, 将图 14B中 G7115和 fl 987泳道扩增得到 的约 800bp片段分别回收、 克隆、 测序分析。 具体过程及测序结果如图 18所示。  According to the principle of Creint/loxP system recombination (Lee and Saito, 1998; Ennifar et al., 2003; Ghosh et al., 2005), the gene-automatic deletion of the binary system removes the foreign gene and leaves only about the plant genome. A non-functional T-DNA fragment of 800 bp in length containing a loxp recognition site sequence (shown in Figure 14). In order to understand the exact sequence information of the residual fragment after deletion of the foreign gene by the automatic deletion binary system, about 800 bp fragments amplified by the G7115 and fl 987 lanes in Fig. 14B were separately recovered, cloned and sequenced. The specific process and sequencing results are shown in Figure 18.
从测序结果可知, 在 L2272-11与 35S-LhG4转基因植物杂交后代 Ω7115中, 确实只剩 下一个 ίοχΡ和 10x2272识别位点序列以及 T-DNA两端的非功能区序列, 另外一个 xP和 1οχ2272识别位点以及 35S-GUS NPTII-nos、 35S-GFP-nos p0p-creint-3TA和 nosP-NTPII-nos 序列已经被完全删除。而在 L198与 35S-LhG4转基因植物杂交后代 fl987植株中,测序结果 与 Ω7115的相同, 只是来自 Effector亲本的识别位点序列为 hxP。这些结果也进一歩从分子 水平确证,在转基因 pLOCB或 pL22720CN与转基因 pL35SLhG4亲本杂交 代种子细胞中, 系统合并后, 能彻底将所有外源基因删除。 From the sequencing results, it was found that in the hybridization of L2272-11 and 35S-LhG4 transgenic plants, there was only one ίοχΡ and 10x2272 recognition site sequence and the non-functional region sequence at both ends of the T-DNA, and another xP and 1οχ2272 recognition sites. The sequence as well as the 35S-GUS NPTII-nos, 35S-GFP-nos p0p-cre int -3TA and nosP-NTPII-nos sequences have been completely deleted. In the flage plants of the L198 and 35S-LhG4 transgenic plants, the sequencing results were the same as those of Ω7115, except that the recognition site sequence from the Effector parent was hxP. These results were further confirmed at the molecular level, in the transgenic pLOCB or pL22720CN and the transgenic pL35SLhG4 parent hybrid generation seed cells, after systemic combination, all foreign genes can be completely removed.
上述实施例表明, 本发明用于控制外源基因生物安全隐患的 GAEBS系统, 不但能有效 维持外源基因在亲本有性繁殖世代中的稳定遗传,而且能将所有外源基因从杂交合子中高效 彻底删除, 删除效率达到 100%。 本发明方法简便易行, 在需要删除外源基因时, 能 100% 删除所有外源基因, 效果显著, 具有很好的应用前景。  The above examples show that the GAEBS system of the present invention for controlling the safety hazards of foreign genetic organisms can not only effectively maintain the stable inheritance of foreign genes in the sexual reproduction of the parents, but also efficiently extract all foreign genes from the hybrid zygote. Completely deleted, the removal efficiency reaches 100%. The method of the invention is simple and convenient, and can delete 100% of all foreign genes when the foreign gene needs to be deleted, and the effect is remarkable, and has a good application prospect.
以上对本发明的详细描述并不限制本发明, 本领域的技术人员可以根据本发明做出各种 变形和改变, 只要不脱离本发明的精神, 均应属于本发明所附权利要求所定义的范围。 The above description of the present invention is not intended to limit the invention, and various modifications and changes can be made by those skilled in the art without departing from the spirit of the invention. .
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Claims

权利要求书 Claim
1.一种用于有性繁殖植物外源基因生物安全控制的基因自动删除双元系统, 包括  1. A gene automatic deletion binary system for the safe control of exogenous genetic organisms for sexually reproducing plants, including
1 ) 用于构建第一植物表达载体的效应子元件, 所述效应子元件包括  1) an effector element for constructing a first plant expression vector, the effector element comprising
两个同向的重组酶特异识别位点;在所述两个重组酶特异性识别位点之间插入下述基因 或核苷酸:  Two homologous recombinase specific recognition sites; inserting the following genes or nucleotides between the two recombinase specific recognition sites:
控制外源基因表达的启动子;  a promoter that controls expression of a foreign gene;
用于导入外源基因的多克隆位点;  a multiple cloning site for introduction of a foreign gene;
重组酶基因; 以及  Recombinase gene;
维持重组酶基因沉默的靶标启动子;  a target promoter that maintains recombinase gene silencing;
2 ) 用于构建第二植物表达载体的激活子元件, 所述激活子元件包括:  2) an activator element for constructing a second plant expression vector, the activator element comprising:
两个同向的重组酶特异识别位点;在所述两个重组酶特异性识别位点之间插入下述基因 或核苷酸:  Two homologous recombinase specific recognition sites; inserting the following genes or nucleotides between the two recombinase specific recognition sites:
控制外源基因表达的启动子;  a promoter that controls expression of a foreign gene;
用于导入外源基因的多克隆位点;  a multiple cloning site for introduction of a foreign gene;
控制转录激活因子基因的启动子; 以及  a promoter that controls the transcriptional activator gene;
与所述靶标启动子配合的转录激活因子基因;  a transcriptional activator gene that cooperates with the target promoter;
3 ) 植物表达载体, 包括第一植物载体和第二植物载体, 用于分别将所述效应子元件和 激活子元件导入植物基因组。  3) A plant expression vector comprising a first plant vector and a second plant vector for introducing the effector element and the activator element into the plant genome, respectively.
2.权利要求 1所述的基因自动删除双元系统,其中所述重组酶特异性识别位点选自 ΙοχΡ, 1οχ2272, 1οχ5171和 FRT识别位点, 所述重组酶基因选自 FLP、 Cre和 Creint重组酶基因。 The gene automatic deletion binary system according to claim 1, wherein the recombinase specific recognition site is selected from the group consisting of ΙοχΡ, 1οχ2272, 1οχ5171 and an FRT recognition site, and the recombinase gene is selected from the group consisting of FLP, Cre and Cre. Int recombinase gene.
3.权利要求 1所述的基因自动删除双元系统, 其中所述控制转录激活因子基因的启动子 为 CaMV 35S启动子。  The gene automatic deletion binary system according to claim 1, wherein the promoter for controlling the transcription activator gene is a CaMV 35S promoter.
4.权利要求 1所述的基因自动删除双元系统, 其中所述靶标启动子及与之配合的转录激 活因子基因选自 pOp/LhG4、 tTA/TOP10/pTAX、 Gal4:VP16/UAS或 mGal4:VP16/UAS 转录 激活系统。  The gene automatic deletion binary system according to claim 1, wherein the target promoter and the transcription activator gene coordinated thereto are selected from the group consisting of pOp/LhG4, tTA/TOP10/pTAX, Gal4: VP16/UAS or mGal4: VP16/UAS transcriptional activation system.
5.权利要求 1所述的基因自动删除双元系统,其中所述重组酶特异性识别位点为 ΙοχΡ或 1οχ2272 , 所述重组酶基因为 Creint, 所述靶标启动子及与之配合的转录激活因子基因为 pOp/LhG4, 所述控制外源基因表达的启动子和控制转录激活因子基因的启动子为 CaMV35S 启动子。 The gene automatic deletion binary system according to claim 1, wherein the recombinase specific recognition site is ΙοχΡ or 1οχ2272, the recombinase gene is Cre int , and the target promoter and the transcription thereof are coordinated. The activator gene is pOp/LhG4, and the promoter for controlling expression of the foreign gene and the promoter for controlling the transcription activator gene are the CaMV35S promoter.
6. 包含效应子元件的第一植物表达载体, 包括: 两个同向的重组酶特异识别位点; 在 所述两个重组酶特异性识别位点之间插入下述基因或核苷酸:  6. A first plant expression vector comprising an effector element, comprising: two homologous recombinase specific recognition sites; inserting the following genes or nucleotides between the two recombinase specific recognition sites:
控制外源基因表达的启动子;  a promoter that controls expression of a foreign gene;
用于导入外源基因的多克隆位点;  a multiple cloning site for introduction of a foreign gene;
重组酶基因; 以及  Recombinase gene;
维持重组酶基因沉默的靶标启动子。 A target promoter that maintains recombinase gene silencing.
7、 包含激活子元件的第二植物表达载体, 包括两个同向的重组酶特异识别位点; 在所 述两个重组酶特异性识别位点之间插入下述基因或核苷酸- 控制外源基因表达的启动子; 7. A second plant expression vector comprising an activator element comprising two homologous recombinase specific recognition sites; inserting the following gene or nucleotide between the two recombinase specific recognition sites - control a promoter for expression of a foreign gene;
用于导入外源基因的多克隆位点;  a multiple cloning site for introduction of a foreign gene;
控制转录激活因子基因的启动子; 以及  a promoter that controls the transcriptional activator gene;
与所述靶标启动子配合的转录激活因子基因;  a transcriptional activator gene that cooperates with the target promoter;
8、 权利要求 1所述的基因自动删除双元系统在制备转基因植物中的应用。  8. The use of the automatic gene deletion binary system of claim 1 for the preparation of a transgenic plant.
9、 一种制备安全的转基因植物的方法, 包括下述步骤- 1 ) 构建权利要求 6所述的第一植物表达载体;  9. A method of preparing a safe transgenic plant, comprising the steps of: - 1) constructing the first plant expression vector of claim 6;
2 ) 构建权利要求 7所述的第二植物表达载体;  2) constructing the second plant expression vector of claim 7;
3 ) 将歩骤 1 ) 所述的第一植物表达载体导入植物基因组, 制备第一转基因植物; 3) introducing the first plant expression vector described in the above step 1) into the plant genome to prepare the first transgenic plant;
4) 将歩骤 2)所述的第二植物表达载体导入植物基因组, 制备第二转基因植物;4) introducing the second plant expression vector described in the step 2) into the plant genome to prepare a second transgenic plant;
5 )将第一转基因植物和第二转基因植物作为亲本相互杂交, 获得删除外源基因的安全的 转基因植物。 5) The first transgenic plant and the second transgenic plant are crossed as a parent to obtain a safe transgenic plant from which the foreign gene is deleted.
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