WO2006111866A2 - Hiv vif mutants - Google Patents

Hiv vif mutants Download PDF

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Publication number
WO2006111866A2
WO2006111866A2 PCT/IB2006/001519 IB2006001519W WO2006111866A2 WO 2006111866 A2 WO2006111866 A2 WO 2006111866A2 IB 2006001519 W IB2006001519 W IB 2006001519W WO 2006111866 A2 WO2006111866 A2 WO 2006111866A2
Authority
WO
WIPO (PCT)
Prior art keywords
polynucleotide
vif
amino acids
nucleotide sequence
positions
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
PCT/IB2006/001519
Other languages
English (en)
French (fr)
Other versions
WO2006111866A3 (en
Inventor
Chiara Bovolenta
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
AGC Biologics SpA
Original Assignee
MolMed SpA
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from GB0504770A external-priority patent/GB0504770D0/en
Priority claimed from GB0510888A external-priority patent/GB0510888D0/en
Priority to KR1020077022937A priority Critical patent/KR101411272B1/ko
Priority to AU2006238617A priority patent/AU2006238617B2/en
Application filed by MolMed SpA filed Critical MolMed SpA
Priority to CA2599525A priority patent/CA2599525C/en
Priority to CN2006800074028A priority patent/CN101137666B/zh
Priority to EP06765488A priority patent/EP1883649B1/en
Priority to JP2008500292A priority patent/JP5324912B2/ja
Priority to US11/815,490 priority patent/US8912152B2/en
Priority to AT06765488T priority patent/ATE533777T1/de
Priority to ES06765488T priority patent/ES2377829T3/es
Publication of WO2006111866A2 publication Critical patent/WO2006111866A2/en
Publication of WO2006111866A3 publication Critical patent/WO2006111866A3/en
Anticipated expiration legal-status Critical
Ceased legal-status Critical Current

Links

Classifications

    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides
    • A61K38/16Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/005Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from viruses
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/12Antivirals
    • A61P31/14Antivirals for RNA viruses
    • A61P31/18Antivirals for RNA viruses for HIV
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P37/00Drugs for immunological or allergic disorders
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P37/00Drugs for immunological or allergic disorders
    • A61P37/02Immunomodulators
    • A61P37/04Immunostimulants
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/005Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from viruses
    • C07K14/08RNA viruses
    • C07K14/15Retroviridae, e.g. bovine leukaemia virus, feline leukaemia virus human T-cell leukaemia-lymphoma virus
    • C07K14/155Lentiviridae, e.g. human immunodeficiency virus [HIV], visna-maedi virus or equine infectious anaemia virus
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2740/00Reverse transcribing RNA viruses
    • C12N2740/00011Details
    • C12N2740/10011Retroviridae
    • C12N2740/15011Lentivirus, not HIV, e.g. FIV, SIV
    • C12N2740/15041Use of virus, viral particle or viral elements as a vector
    • C12N2740/15043Use of virus, viral particle or viral elements as a vector viral genome or elements thereof as genetic vector
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2740/00Reverse transcribing RNA viruses
    • C12N2740/00011Details
    • C12N2740/10011Retroviridae
    • C12N2740/16011Human Immunodeficiency Virus, HIV
    • C12N2740/16311Human Immunodeficiency Virus, HIV concerning HIV regulatory proteins
    • C12N2740/16322New viral proteins or individual genes, new structural or functional aspects of known viral proteins or genes

Definitions

  • a polynucleotide comprising a nucleotide sequence encoding Vif wherein each of the amino acids corresponding to positions 127, 128, 130, 131, 132 and 142 of the sequence in Figure IA are replaced with another amino acid and wherein one or more of the amino acids corresponding to positions 22, 29, 41, 48, 66, 80, 109, 185 and 186 are not I 3 1, K, N 5 V 5 N, R 5 R and N respectively.
  • amino acids corresponding to positions 127, 128, 130, 131, 132 and 142 are replaced with N, V, R, L, S and I respectively.
  • amino acids corresponding to positions 22, 29, 41 48, 66, 80 and 109 are not I, I 5 K, N 5 V, N and R respectively.
  • amino acids corresponding to positions 66, 80, 109, 127, 128, 130, 131, 132, 142, 185 and 186 are replaced with V, N, R, N, V, R, L, S, I, R and N respectively.
  • amino acid corresponding to position 48 is N.
  • amino acids corresponding to positions 29, 41, 48, 66, 80, 109, 127, 128, 13O 5 131, 132, 142, 185 and 186 are replaced with I, K, N, V, N, R, N 5 V, R, L, S 5 I, R and N respectively.
  • the amino acid corresponding to position 22 is that present in a naturally occurring Vif, such as, but not limited to, HXB2 ace. #K03455, BRU accJ K02013, SF2 accJ K02007, PV22 acc.# K02083, MN acc.#M17449 and NL4-3 ace. # M19921 (see Figures IA, IB and 1C).
  • a Suitable amino acid for this position is, but not limited to, K (Lysine).
  • the fragment encoded by the polynucleotide further comprises a replacement amino acid at the amino acid corresponding to position 185 of the wild- type sequence in Figure IA.
  • amino acid at position 109 of the wild-type sequence in Figure IA is altered to R.
  • the vector of the present invention further comprises a polynucleotide sequence encoding a selection marker gene.
  • the vector of the present invention further comprises a polynucleotide sequence encoding at least part of the low affinity nerve growth factor receptor (LNGFR).
  • LNGFR low affinity nerve growth factor receptor
  • the cell is a hematopoietic CD34+ precursor cell or a hematopoietic cell.
  • the pharmaceutical composition of the present invention may be formulated to be delivered using a mini-pump or by a mucosal route, for example, as a nasal spray or aerosol for inhalation or ingestable solution, or parenterally in which the composition is formulated by an injectable form, for delivery, by, for example, an intravenous, intramuscular or subcutaneous route.
  • the formulation may be designed to be delivered by both routes.
  • Vif is one of the less immunogenic among the HIV-I proteins (Addo et al., 2003).
  • the mutant Vif polypeptides of the present invention are not expected to differ significantly from WT- Vif under this respect, at least on the basis of both BIMAS (http://bimas.cit.nih.gov/) and RANKPEP (http://www. mifoundation.org/Tools/rankpep.html) algorithms for predicting HLA-I binding peptides (data not shown).
  • Low immunogenicity and Tat-dependent expression of mutant Vif should avoid or at least minimize an immune response against uninfected retroviral-transduced cells in vivo.
  • the wild-type HIV-I LTR guarantees very high expression levels of the transgene in HIV-I infected cells, a crucial requirement for the activity of a trans-dominant mutant protein.

Landscapes

  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Virology (AREA)
  • Medicinal Chemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Immunology (AREA)
  • Gastroenterology & Hepatology (AREA)
  • Molecular Biology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Veterinary Medicine (AREA)
  • Pharmacology & Pharmacy (AREA)
  • Public Health (AREA)
  • Animal Behavior & Ethology (AREA)
  • Genetics & Genomics (AREA)
  • Biophysics (AREA)
  • Biochemistry (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • General Chemical & Material Sciences (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Engineering & Computer Science (AREA)
  • Communicable Diseases (AREA)
  • Oncology (AREA)
  • AIDS & HIV (AREA)
  • Tropical Medicine & Parasitology (AREA)
  • Epidemiology (AREA)
  • Hematology (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Medicines That Contain Protein Lipid Enzymes And Other Medicines (AREA)
  • Peptides Or Proteins (AREA)
  • Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
  • Medicines Containing Material From Animals Or Micro-Organisms (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)
PCT/IB2006/001519 2005-03-08 2006-03-07 Hiv vif mutants Ceased WO2006111866A2 (en)

Priority Applications (9)

Application Number Priority Date Filing Date Title
AT06765488T ATE533777T1 (de) 2005-03-08 2006-03-07 Hiv-vif-mutanten
ES06765488T ES2377829T3 (es) 2005-03-08 2006-03-07 Mutantes de Vif del HIV
US11/815,490 US8912152B2 (en) 2005-03-08 2006-03-07 HIV vif mutants
KR1020077022937A KR101411272B1 (ko) 2005-03-08 2006-03-07 HIV Vif 돌연변이체
CA2599525A CA2599525C (en) 2005-03-08 2006-03-07 Hiv vif
CN2006800074028A CN101137666B (zh) 2005-03-08 2006-03-07 HIV Vif突变体
EP06765488A EP1883649B1 (en) 2005-03-08 2006-03-07 Hiv vif mutants
JP2008500292A JP5324912B2 (ja) 2005-03-08 2006-03-07 HIVVif変異体
AU2006238617A AU2006238617B2 (en) 2005-03-08 2006-03-07 HIV Vif mutants

Applications Claiming Priority (4)

Application Number Priority Date Filing Date Title
GB0504770.9 2005-03-08
GB0504770A GB0504770D0 (en) 2005-03-08 2005-03-08 HIV Vif
GB0510888A GB0510888D0 (en) 2005-05-26 2005-05-26 Hiv vif
GB0510888.1 2005-05-26

Publications (2)

Publication Number Publication Date
WO2006111866A2 true WO2006111866A2 (en) 2006-10-26
WO2006111866A3 WO2006111866A3 (en) 2007-04-12

Family

ID=37115522

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/IB2006/001519 Ceased WO2006111866A2 (en) 2005-03-08 2006-03-07 Hiv vif mutants

Country Status (9)

Country Link
US (1) US8912152B2 (enExample)
EP (1) EP1883649B1 (enExample)
JP (1) JP5324912B2 (enExample)
KR (1) KR101411272B1 (enExample)
AT (1) ATE533777T1 (enExample)
AU (1) AU2006238617B2 (enExample)
CA (1) CA2599525C (enExample)
ES (1) ES2377829T3 (enExample)
WO (1) WO2006111866A2 (enExample)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2011015379A1 (en) 2009-08-05 2011-02-10 Nexigen Gbmh Human hcv-interacting proteins and methods of use

Families Citing this family (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CU23896B1 (es) * 2010-04-01 2013-05-31 Ct De Ingeniería Genética Y Biotecnología Método para inhibir la replicación del vih en células de mamíferos
KR102458904B1 (ko) * 2020-06-19 2022-11-01 숙명여자대학교산학협력단 신규의 bmpr2 유전자 기능획득 돌연변이체 및 이의 용도

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7198784B2 (en) * 1996-10-17 2007-04-03 Oxford Biomedica (Uk) Limited Retroviral vectors
WO2005024422A2 (en) * 2003-05-23 2005-03-17 Oregon Health & Science University Methods for identifying inhibitors

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
None

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2011015379A1 (en) 2009-08-05 2011-02-10 Nexigen Gbmh Human hcv-interacting proteins and methods of use

Also Published As

Publication number Publication date
AU2006238617A1 (en) 2006-10-26
JP5324912B2 (ja) 2013-10-23
EP1883649A2 (en) 2008-02-06
CA2599525C (en) 2015-05-26
US8912152B2 (en) 2014-12-16
KR20070118624A (ko) 2007-12-17
CA2599525A1 (en) 2006-10-26
KR101411272B1 (ko) 2014-07-03
JP2008532510A (ja) 2008-08-21
ATE533777T1 (de) 2011-12-15
ES2377829T3 (es) 2012-04-02
AU2006238617B2 (en) 2012-08-02
EP1883649B1 (en) 2011-11-16
US20080286248A1 (en) 2008-11-20
WO2006111866A3 (en) 2007-04-12

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