TW202227482A - 用於降低異源多肽末端異質性的信號肽 - Google Patents
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Abstract
本披露涉及用於降低異源多肽末端異質性的信號肽。具體地,本披露涉及用於蛋白表達的信號肽,還涉及重組多肽、其製備方法及含有重組多肽的組成物。
Description
本披露涉及分子生物學和蛋白質工程領域,具體涉及降低異源多肽末端異質性的方法。
這裡的陳述僅提供與本披露有關的背景信息,而不必然地構成現有技術。
信號肽是引導新合成的蛋白質向分泌通路轉移的短肽鏈。信號肽位於分泌蛋白質的N末端。一般由15~30個胺基酸組成。通常包括了三個區:一個帶正電的N末端,稱為鹼性胺基末端;一個中間疏水序列,以中性胺基酸為主,能夠形成一段α螺旋結構,它是信號肽的主要功能區;一個較長的帶負電荷的C末端,含小分子胺基酸,是信號序列切割位點,也稱加工區。當信號肽序列合成後,被信號識別顆粒(SRP)所識別,蛋白質合成暫停或減緩,信號識別顆粒將核糖體攜帶至內質網上,蛋白質合成重新開始。在信號肽的引導下,新合成的蛋白質進入內質網腔,而信號肽序列則在信號肽酶的作用下被切除。
通常信號肽的高效切割,可以確保抗體輕、重鏈多肽均可被準確切割,這對於哺乳動物細胞介導的抗體表達非常重要。但是,在信號肽切割過程
中,切割位點可能會發生變化,導致了重組抗體輕、重胺基酸鏈的延長或截短。截短或延長的抗體,其結構的變化會導致其親和性發生變化,從而影響抗體活性;因此在抗體生產過程中需要避免胺基酸鏈延長或截短的發生。此外,部分的產物截短或延長,使得生產過程中不同批次產品產生差異,需要進行額外的質檢,且從工藝上很難解決此類問題。因此,生產出具有N末端同質性的輕、重鏈抗體是目前工業界的普遍共識。
本披露涉及信號肽及其用途,其中該信號肽用於降低異源多肽的末端異質性。
本披露提供一種降低抗體的重鏈和/或抗體的輕鏈的N末端異質性的方法,其包括
培養宿主細胞,其中該宿主細胞包含:(1)第一多核苷酸,其編碼抗體的重鏈及與該重鏈的N端有效連接的第一信號肽;其中,該第一信號肽包含SEQ ID NO:55或SEQ ID NO:56的胺基酸序列;和/或
(2)第二多核苷酸,其編碼抗體的輕鏈及與該輕鏈的N端有效連接的第二信號肽;其中,該第二信號肽包含SEQ ID NO:55或SEQ ID NO:56的胺基酸序列;
表達該抗體的重鏈和/或抗體的輕鏈;
其中,SEQ ID NO:55如MEWSWVFLFFLSLTGX1HX2所示,其中,X1是V、A、S、T、G、C、L或I,X2是A、G、S、C、T或Q;
SEQ ID NO:56如MSVPTQVLGLLLLWLTDX3RX4所示,其中,X3是
V、A、S、T、G、C、L或I;X4是A、G、S、C、T或Q,並且當X3選自A時,X4不是C。
在一些實施方案中,如前所述的降低抗體的重鏈和/或抗體的輕鏈的N末端異質性的方法,其中,表達得到的該抗體的重鏈具有低於3%、2.5%、2%、1.5%或1%的末端延伸比率和/或抗體的輕鏈具有低於3%、2.5%、2%、1.5%或1%的末端延伸比率;在一些實施方案中,表達得到的該抗體重鏈具有低於1%的末端延伸比率和/或抗體的輕鏈具有低於1%的末端延伸比率。在一些實施方案中,該末端延伸比率是基於肽圖檢測方法測算的。在一些實施方案中,表達得到的該抗體重鏈基本上沒有末端殘基的殘留和/或抗體的輕鏈基本上沒有末端殘基的殘留;在一些實施方案中,表達得到的該抗體重鏈具有0%的末端延伸比率和/或抗體的輕鏈具有0%的末端延伸比率。
在一些實施方案中,如前所述的降低抗體的重鏈和/或抗體的輕鏈的N末端異質性的方法,其中,該第一信號肽或第二信號肽各自獨立的包含選自如下的肽:
SEQ ID NO 57:MEWSWVFLFFLSLTGVHA;
SEQ ID NO 58:MEWSWVFLFFLSLTGVHG;
SEQ ID NO 59:MEWSWVFLFFLSLTGVHS;
SEQ ID NO 60:MEWSWVFLFFLSLTGVHC;
SEQ ID NO 61:MEWSWVFLFFLSLTGVHT;
SEQ ID NO 62:MEWSWVFLFFLSLTGVHQ;
SEQ ID NO 63:MEWSWVFLFFLSLTGAHA;
SEQ ID NO 64:MEWSWVFLFFLSLTGAHG;
SEQ ID NO 65:MEWSWVFLFFLSLTGAHS;
SEQ ID NO 66:MEWSWVFLFFLSLTGAHC;
SEQ ID NO 67:MEWSWVFLFFLSLTGAHT;
SEQ ID NO 68:MEWSWVFLFFLSLTGAHQ;
SEQ ID NO 69:MEWSWVFLFFLSLTGSHA;
SEQ ID NO 70:MEWSWVFLFFLSLTGSHG;
SEQ ID NO 71:MEWSWVFLFFLSLTGSHS;
SEQ ID NO 72:MEWSWVFLFFLSLTGSHC;
SEQ ID NO 73:MEWSWVFLFFLSLTGSHT;
SEQ ID NO 74:MEWSWVFLFFLSLTGSHQ;
SEQ ID NO 75:MEWSWVFLFFLSLTGTHA;
SEQ ID NO 76:MEWSWVFLFFLSLTGTHG;
SEQ ID NO 77:MEWSWVFLFFLSLTGTHS;
SEQ ID NO 78:MEWSWVFLFFLSLTGTHC;
SEQ ID NO 79:MEWSWVFLFFLSLTGTHT;
SEQ ID NO 80:MEWSWVFLFFLSLTGTHQ;
SEQ ID NO 81:MEWSWVFLFFLSLTGGHA;
SEQ ID NO 82:MEWSWVFLFFLSLTGGHG;
SEQ ID NO 83:MEWSWVFLFFLSLTGGHS;
SEQ ID NO 84:MEWSWVFLFFLSLTGGHC;
SEQ ID NO 85:MEWSWVFLFFLSLTGGHT;
SEQ ID NO 86:MEWSWVFLFFLSLTGGHQ;
SEQ ID NO 87:MEWSWVFLFFLSLTGCHA;
SEQ ID NO 88:MEWSWVFLFFLSLTGCHG;
SEQ ID NO 89:MEWSWVFLFFLSLTGCHS;
SEQ ID NO 90:MEWSWVFLFELSLTGCHC;
SEQ ID NO 91:MEWSWVFLFFLSLTGCHT;
SEQ ID NO 92:MEWSWVFLFFLSLTGCHQ;
SEQ ID NO 93:MEWSWVFLFFLSLTGLHA;
SEQ ID NO 94:MEWSWVFLFFLSLTGLHG;
SEQ ID NO 95:MEWSWVFLFFLSLTGLHS;
SEQ ID NO 96:MEWSWVFLFFLSLTGLHC;
SEQ ID NO 97:MEWSWVFLFFLSLTGLHT;
SEQ ID NO 98:MEWSWVFLFFLSLTGLHQ;
SEQ ID NO 99:MEWSWVFLFFLSLTGIHA;
SEQ ID NO 100:MEWSWVFLFFLSLTGIHG;
SEQ ID NO 101:MEWSWVFLFFLSLTGIHS;
SEQ ID NO 102:MEWSWVFLFFLSLTGIHC;
SEQ ID NO 103:MEWSWVFLFFLSLTGIHT;
SEQ ID NO 104:MEWSWVFLFFLSLTGIHQ;
SEQ ID NO 105:MSVPTQVLGLLLLWLTDVRA;
SEQ ID NO 106:MSVPTQVLGLLLLWLTDVRG;
SEQ ID NO 107:MSVPTQVLGLLLLWLTDVRS;
SEQ ID NO 108:MSVPTQVLGLLLLWLTDVRC;
SEQ ID NO 109:MSVPTQVLGLLLLWLTDVRT;
SEQ ID NO 110:MSVPTQVLGLLLLWLTDVRQ;
SEQ ID NO 111:MSVPTQVLGLLLLWLTDARA;
SEQ ID NO 112:MSVPTQVLGLLLLWLTDARG;
SEQ ID NO 113:MSVPTQVLGLLLLWLTDARS;
SEQ ID NO 114:MSVPTQVLGLLLLWLTDART;
SEQ ID NO 115:MSVPTQVLGLLLLWLTDARQ;
SEQ ID NO 116:MSVPTQVLGLLLLWLTDSRA;
SEQ ID NO 117:MSVPTQVLGLLLLWLTDSRG;
SEQ ID NO 118:MSVPTQVLGLLLLWLTDSRS;
SEQ ID NO 119:MSVPTQVLGLLLLWLTDSRC;
SEQ ID NO 120:MSVPTQVLGLLLLWLTDSRT;
SEQ ID NO 121:MSVPTQVLGLLLLWLTDSRQ;
SEQ ID NO 122:MSVPTQVLGLLLLWLTDTRA;
SEQ ID NO 123:MSVPTQVLGLLLLWLTDTRG;
SEQ ID NO 124:MSVPTQVLGLLLLWLTDTRS;
SEQ ID NO 125:MSVPTQVLGLLLLWLTDTRC;
SEQ ID NO 126:MSVPTQVLGLLLLWLTDTRT;
SEQ ID NO 127:MSVPTQVLGLLLLWLTDTRQ;
SEQ ID NO 128:MSVPTQVLGLLLLWLTDGRA;
SEQ ID NO 129:MSVPTQVLGLLLLWLTDGRG;
SEQ ID NO 130:MSVPTQVLGLLLLWLTDGRS;
SEQ ID NO 131:MSVPTQVLGLLLLWLTDGRC;
SEQ ID NO 132:MSVPTQVLGLLLLWLTDGRT;
SEQ ID NO 133:MSVPTQVLGLLLLWLTDGRQ;
SEQ ID NO 134:MSVPTQVLGLLLLWLTDCRA;
SEQ ID NO 135:MSVPTQVLGLLLLWLTDCRG;
SEQ ID NO 136:MSVPTQVLGLLLLWLTDCRS;
SEQ ID NO 137:MSVPTQVLGLLLLWLTDCRC;
SEQ ID NO 138:MSVPTQVLGLLLLWLTDCRT;
SEQ ID NO 139:MSVPTQVLGLLLLWLTDCRQ;
SEQ ID NO 140:MSVPTQVLGLLLLWLTDLRA;
SEQ ID NO 141:MSVPTQVLGLLLLWLTDLRG;
SEQ ID NO 142:MSVPTQVLGLLLLWLTDLRS;
SEQ ID NO 143:MSVPTQVLGLLLLWLTDLRC;
SEQ ID NO 144:MSVPTQVLGLLLLWLTDLRT;
SEQ ID NO 145:MSVPTQVLGLLLLWLTDLRQ;
SEQ ID NO 146:MSVPTQVLGLLLLWLTDIRA;
SEQ ID NO 147:MSVPTQVLGLLLLWLTDIRG;
SEQ ID NO 148:MSVPTQVLGLLLLWLTDIRS;
SEQ ID NO 149:MSVPTQVLGLLLLWLTDIRC;
SEQ ID NO 150:MSVPTQVLGLLLLWLTDIRT;和
SEQ ID NO 151:MSVPTQVLGLLLLWLTDIRQ。
在一些實施方案中,如前所述的降低抗體的重鏈和/或抗體的輕鏈
的N末端異質性的方法,其中,該第一信號肽或第二信號肽各自獨立的包含SEQ ID NO:57、SEQ ID NO:58、SEQ ID NO:59、SEQ ID NO:93、SEQ ID NO:94、SEQ ID NO:95、SEQ ID NO:99、SEQ ID NO:100、SEQ ID NO:101、SEQ ID NO:105、SEQ ID NO:106、SEQ ID NO:107、SEQ ID NO:140、SEQ ID NO:141、SEQ ID NO:142、SEQ ID NO:146、SEQ ID NO:147或SEQ ID NO:148的胺基酸序列。
在一些實施方案中,如前所述的降低抗體的重鏈和/或抗體的輕鏈的N末端異質性的方法,其中第一信號肽包含SEQ ID NO:57或SEQ ID NO:105的胺基酸序列,和/或第二信號肽包含SEQ ID NO:57或SEQ ID NO:105的胺基酸序列。
在一些實施方案中,如前所述的降低抗體的重鏈和/或抗體的輕鏈的N末端異質性的方法,其中,第一信號肽包含SEQ ID NO:57的胺基酸序列,和/或第二信號肽包含SEQ ID NO:57的胺基酸序列。
在一些實施方案中,如前所述的降低抗體的重鏈和/或抗體的輕鏈的N末端異質性的方法,其中,第一信號肽包含SEQ ID NO:57的胺基酸序列,和/或第二信號肽包含SEQ ID NO:105的胺基酸序列。
在一些實施方案中,如前所述的降低抗體的重鏈和/或抗體的輕鏈的N末端異質性的方法,其中,第一信號肽包含SEQ ID NO:105的胺基酸序列,和/或第二信號肽包含SEQ ID NO:57的胺基酸序列。
在一些實施方案中,如前所述的降低抗體的重鏈和/或抗體的輕鏈的N末端異質性的方法,其中,第一信號肽包含SEQ ID NO:105的胺基酸序列,和/或第二信號肽包含SEQ ID NO:105的胺基酸序列。
在一些實施方案中,如前所述的降低抗體的重鏈和/或抗體的輕鏈
的N末端異質性的方法,其中,該第一多核苷酸或第二多核苷酸各自獨立的編碼多肽,該多肽包含選自SEQ ID NO:157、SEQ ID NO:158、SEQ ID NO:159、SEQ ID NO:160、SEQ ID NO:163、SEQ ID NO:164、SEQ ID NO:165、SEQ ID NO:166、SEQ ID NO:171和SEQ ID NO:172的胺基酸序列。
在一些實施方案中,如前所述的降低抗體的重鏈和/或抗體的輕鏈的N末端異質性的方法,其中,該宿主細胞是真核宿主細胞;在一些實施方案中,該真核宿主細胞是CHO細胞或酵母。
在一些實施方案中,如前所述的降低抗體的重鏈和/或抗體的輕鏈的N末端異質性的方法,其中,該抗體是鼠源抗體、嵌合抗體、人源化抗體、人抗體、親和力成熟抗體或多特異性抗體。
在一些實施方案中,如前所述的降低抗體的重鏈和/或抗體的輕鏈的N末端異質性的方法,其中,該抗體選自抗TLR7抗體、抗HER2(ErbB2)抗體、抗Claudin18.2抗體、抗EGFR抗體、抗B7H3抗體、抗c-Met抗體、抗HER3(ErbB3)抗體、抗HER4(ErbB4)抗體、抗CD3抗體、抗CD20抗體、抗CD22抗體、抗CD30抗體、抗CD33抗體、抗CD38抗體、抗CD44抗體、抗CD47抗體、抗CD56抗體、抗CD70抗體、抗CD73抗體、抗CD105抗體、抗CEA抗體、抗A33抗體、抗Cripto抗體、抗SOST抗體、抗EphA2抗體、抗G250抗體、抗MUCl抗體、抗Lewis Y抗體、抗VEGFR抗體、抗GPNMB抗體、抗凝血酶抗體、抗A β抗體、抗Integrin抗體、抗ANGPTL3抗體、抗PSMA抗體、抗PD-1抗體、抗PD-L1抗體、抗LAG3抗體、抗IL-5抗體、抗IL-15抗體、抗IL-4R抗體、抗IL-6R抗體、抗TIGHT抗體、抗Tenascin-C抗體、抗SLC44A4抗體、抗PCSK9抗體、抗EpCAM抗體、抗CTGF抗體、抗TSLP抗體、抗CEA抗體、抗Mesothelin抗體和抗FcRn抗體。
在一些實施方案中,如前所述的降低抗體的重鏈和/或抗體的輕鏈的N末端異質性的方法,其中,該抗體選自曲妥珠單抗(Trastuzumab)、帕妥珠單抗(Pertuzumab)、尼妥珠單抗(Nimotuzumab)、恩諾妥珠單抗(Enoblituzumab)、依米妥珠單抗(Emibetuzumab)、因妥珠單抗(Inotuzumab)、匹那妥珠單抗(Pinatuzumab)、本妥昔單抗(Brentuximab)、吉妥珠單抗(Gemtuzumab)、必法妥珠單抗(Bivatuzumab)、洛法妥珠單抗(Lorvotuzumab)、cBR96、格來木單抗(Glematumamab)、抗Claudin18.2抗體和抗FcRn抗體,其中該抗Claudin18.2抗體的重鏈包含SEQ ID NO:49的胺基酸序列、輕鏈包含SEQ ID NO:47的胺基酸序列;該抗FcRn抗體的重鏈包含SEQ ID NO:167的胺基酸序列,輕鏈包含SEQ ID NO:168的胺基酸序列。
在一些實施方案中,如前所述的降低抗體的重鏈和/或抗體的輕鏈的N末端異質性的方法,該方法包括將輕鏈質粒選殖至重鏈質粒中構建全長抗體質粒。在一些實施方案中,該方法藉由電轉化將質粒導入宿主細胞。
本披露還提供一種信號肽,其包含SEQ ID NO:55或SEQ ID NO:56的胺基酸序列,或由其組成。在一些實施方案中,該多肽是信號肽,其胺基酸序列如SEQ ID NO:55至SEQ ID NO:151任一所示。
一種多肽,其包含信號肽,該信號肽包含SEQ ID NO:55或SEQ ID NO:56的胺基酸序列。
在一些實施方案中,如前所述的多肽,其中,該多肽還包含與該信號肽有效連接的異源多肽;在一些實施方案中,該異源多肽是抗體的重鏈或抗體的輕鏈;在一些實施方案中,該信號肽與抗體的重鏈或抗體的輕鏈的N端有效連接。
在一些實施方案中,如前所述的多肽,其中,該信號肽包含選自
SEQ ID NO 57至SEQ ID NO:151組成的組的胺基酸序列。
在一些實施方案中,如前所述的多肽,其中,該信號肽包含SEQ ID NO:57、SEQ ID NO:58、SEQ ID NO:59、SEQ ID NO:93、SEQ ID NO:94、SEQ ID NO:95、SEQ ID NO:99、SEQ ID NO:100、SEQ ID NO:101、SEQ ID NO:105、SEQ ID NO:106、SEQ ID NO:107、SEQ ID NO:140、SEQ ID NO:141、SEQ ID NO:142、SEQ ID NO:146、SEQ ID NO:147或SEQ ID NO:148的胺基酸序列。
在一些實施方案中,如前所述的多肽,其中,該信號肽包含選自如SEQ ID NO:57和SEQ ID NO:105所示的胺基酸序列。
在一些實施方案中,如前所述的多肽,其中,多肽包含選自SEQ ID NO:157、SEQ ID NO:158、SEQ ID NO:159、SEQ ID NO:160、SEQ ID NO:163、SEQ ID NO:164、SEQ ID NO:165、SEQ ID NO:166、SEQ ID NO:169、SEQ ID NO:170、SEQ ID NO:171和SEQ ID NO:172組成的組的胺基酸序列。
本披露還提供一種核酸分子,其編碼如前任一項所述的多肽。
本披露還提供一種宿主細胞,其包含如前所述的核酸分子。
在一些實施方案中,如前所述的宿主細胞,其中,該宿主細胞是真核宿主細胞;在一些實施方案中,該真核宿主細胞是CHO細胞或酵母。
本披露還提供一種組成物,其含有異源多肽,該異源多肽具有低於3%、2.5%、2%、1.5%或1%的末端延伸比率;在一些實施方案中,表達得到的該異源多肽具有低於1%的末端延伸比率;在一些實施方案中,表達得到的該異源多肽具有低於1%的末端延伸比率,並且該末端延伸比率是基於肽圖檢測方法測算的;在一些實施方案中,表達得到的該異源多肽基本上沒有末端殘基的殘留;在一些實施方案中,表達得到的該異源多肽具有0%的末端延伸比率。
在一些實施方案中,如前所述的組成物,其中,該異源多肽是抗體的重鏈和/或抗體的輕鏈;在一些實施方案中,該抗體選自Trastuzumab、Pertuzumab、抗Claudin18.2抗體和抗FcRn抗體,其中該抗Claudin18.2抗體的重鏈包含SEQ ID NO:49的胺基酸序列,輕鏈包含SEQ ID NO:47的胺基酸序列。
在一些實施方案中,該抗體選自抗FcRn抗體,其中該抗FcRn抗體的重鏈包含SEQ ID NO:167的胺基酸序列,輕鏈包含SEQ ID NO:168的胺基酸序列。
在一些實施方案中,如前所述的降低抗體的重鏈和/或抗體的輕鏈的N末端異質性的方法,其中,表達得到的該抗體的重鏈和/或抗體的輕鏈具有低於3%、2.5%、2%、1.5%或1%的末端延伸比率;在一些實施方案中,表達得到的該抗體重鏈和/或抗體的輕鏈具有低於1%的末端延伸比率;在一些實施方案中,表達得到的該抗體重鏈和/或抗體的輕鏈具有低於1%的末端延伸比率,並且該末端延伸比率是基於肽圖檢測方法測算的;在一些實施方案中,表達得到的該抗體重鏈和/或抗體的輕鏈基本上沒有末端殘基的殘留;在一些實施方案中,表達得到的該抗體重鏈和/或抗體的輕鏈具有0%的末端延伸比率。
在一些實施方案中,如前所述的組成物,其是由如前任一項所述的方法製備得到的。
本披露提供的信號肽具有穩定的降低異源多肽末端異質性的效果,適用於大規模表達異源多肽。
圖1:在細胞水平上,人源化抗體與人Claudin18.2結合的FACS檢測
結果。
圖2:人源化抗體的NUGC4細胞內吞實驗。
圖3A至圖3C:在不同Claudin18.2表達程度的NUGC4細胞中,抗體的ADCC效應檢測;圖3A為抗體在野生型NUGC4細胞(Claudin18.2低表達)中的ADCC效應檢測;圖3B為抗體在Claudin18.2中等表達NUGC4細胞中的ADCC效應檢測;圖3C為抗體在Claudin18.2高表達NUGC4細胞中的ADCC效應檢測。
圖4A至圖4D:圖4A為Pertuzumab-1抗體輕鏈去糖還原分子量質譜圖;圖4B為Pertuzumab-3抗體輕鏈去糖還原分子量質譜圖;圖4C為Pertuzumab-1抗體重鏈鏈去糖還原分子量質譜圖;圖4D為Pertuzumab-3抗體重鏈去糖還原分子量質譜圖。
圖5A至圖5D:圖5A為Pertuzumab-2抗體輕鏈去糖還原分子量質譜圖;圖5B為Pertuzumab-4抗體輕鏈去糖還原分子量質譜圖;圖5C為Pertuzumab-2抗體重鏈鏈去糖還原分子量質譜圖;圖5D為Pertuzumab-4抗體重鏈去糖還原分子量質譜圖。
圖6A至圖6D:圖6A為h1902-5-1抗體輕鏈去糖還原分子量質譜圖;圖6B為h1902-5-2抗體輕鏈去糖還原分子量質譜圖;圖6C為h1902-5-1抗體重鏈鏈去糖還原分子量質譜圖;圖6D為h1902-5-2抗體重鏈去糖還原分子量質譜圖。
圖7A至圖7D:圖7A為FcRn-1抗體輕鏈去糖還原分子量質譜圖;圖7B為FcRn-2抗體輕鏈去糖還原分子量質譜圖;圖7C為FcRn-1抗體重鏈鏈去糖還原分子量質譜圖;圖7D為FcRn-2抗體重鏈去糖還原分子量質譜圖。
發明詳述
術語
為了更容易理解本披露,以下具體定義了某些技術和科學術語。除非在本文中另有明確定義,本文使用的所有其它技術和科學術語都具有本披露所屬技術領域具有通常知識者通常理解的含義。
本披露所用胺基酸三字母代碼和單字母代碼如J.biol.chem,243,p3558(1968)中所述。
本披露所述的“抗體”在本文中以最廣意義使用,並且包括不同的抗體結構,包括,但不限於,單株抗體、多株抗體、鼠源抗體、嵌合抗體、人源化抗體、多特異性抗體(例如,雙特異性抗體)和抗體片段,只要它們顯示所需的抗原結合活性和特異性即可。
術語“抗體片段”是指不同於完整抗體的分子,其包含完整抗體的部分,該部分與完整抗體特異性結合的抗原特異性結合。抗體片段的實例包括但不限於Fv、Fab、Fab'、Fab’-SH、F(ab')2、雙抗體、線性抗體、單鏈抗體分子(例如scFv或scFab)、單域抗體(dAbs)、和由抗體片段形成的多特異性抗體。
本披露所述的“嵌合抗體(chimeric antibody)”,是將鼠源性抗體的可變區與人抗體的恆定區融合而成的抗體,可以減輕鼠源性抗體誘發的免疫應答反應。
本披露所述的“人源化抗體(humanized antibody)”,也稱為CDR移植抗體(CDR-grafted antibody),是指將鼠的CDR序列移植到人的抗體可變區框架,即不同類型的人種系抗體框架序列中產生的抗體。可以克服嵌合抗體由於攜帶大量鼠蛋白成分,從而誘導的異源性反應。為避免免疫原性下降的同時,引
起的活性下降,可對該人抗體可變區框架序列進行最少反向突變或回復突變,以保持或增強活性。本披露的人源化抗體也包括進一步由酵母菌展示對CDR進行親和力成熟突變後的人源化抗體。
本披露中“人抗體(HuMAb)”、“人源抗體”、“全人抗體”、“完全人抗體”可以互換使用,其胺基酸序列對應於由人或人細胞產生的抗體的胺基酸序列、或衍生自利用人抗體組庫或其它人抗體編碼序列的非人來源的胺基酸序列。該人抗體的定義明確排除了包含非人抗原結合殘基的人源化抗體。
本披露所述的“抗體片段”是指不同於完整抗體的分子,其包含完整抗體的部分,該部分與完整抗體特異性結合的抗原特異性結合。抗體片段的實例包括但不限於Fv、Fab、Fab'、Fab’-SH、F(ab')2、雙抗體、線性抗體、單鏈抗體分子(例如scFv或scFab)、單域抗體(dAbs)、和由抗體片段形成的多特異性抗體。本披露的“抗體”包含“完整抗體”及其“抗體片段”。相應的,本披露所述的抗體的重鏈或抗體的輕鏈包含完整的重鏈或完整的輕鏈,也包含抗體片段中的重鏈片段或輕鏈片段。
術語“框架”或“FR”指除了互補決定區(CDR)殘基以外的可變域殘基。可變域的FR一般由四個FR域組成:FR1、FR2、FR3和FR4。因而,CDR和FR序列一般以下面的次序在VH(或VL)中出現:
FR1-HCDR1(LCDR1)-FR2-HCDR2(LCDR2)-FR3-HCDR3(LCDR3)-FR4。
術語“互補決定區”、“CDR”或“高變區”是指抗體的可變結構域內主要促成抗原結合的6個高變區之一。通常,每個重鏈可變區中存在三個CDR(HCDR1、HCDR2、HCDR3),每個輕鏈可變區中存在三個CDR(LCDR1、
LCDR2、LCDR3)。可以使用各種公知方案中的任何一種來確定CDR的胺基酸序列邊界,包括“Kabat”編號規則(參見Kabat等(1991),“Sequences of Proteins of Immunologicai Interest”,第5版,Public Health Service,National Institutes of Health,Bethesda,MD)、“Chothia”編號規則(參見Al-Lazikani等人,(1997)JMB 273:927-948)和ImMunoGenTics(IMGT)編號規則(Lefranc M.P.,Immunologist,7,132-136(1999);Lefranc,M.P.等,Dev.Comp.Immunol.,27,55-77(2003)等。例如,對於經典格式,遵循Kabat規則,該重鏈可變域(VH)中的CDR胺基酸殘基編號為31-35(HCDR1)、50-65(HCDR2)和95-102(HCDR3);輕鏈可變域(VL)中的CDR胺基酸殘基編號為24-34(LCDR1)、50-56(LCDR2)和89-97(LCDR3)。遵循Chothia規則,VH中的CDR胺基酸編號為26-32(HCDR1)、52-56(HCDR2)和95-102(HCDR3);並且VL中的胺基酸殘基編號為26-32(LCDR1)、50-52(LCDR2)和91-96(LCDR3)。藉由組合Kabat和Chothia兩者的CDR定義,CDR由人VH中的胺基酸殘基26-35(HCDR1)、50-65(HCDR2)和95-102(HCDR3)和人VL中的胺基酸殘基24-34(LCDR1)、50-56(LCDR2)和89-97(LCDR3)構成。遵循IMGT規則,VH中的CDR胺基酸殘基編號大致為26-35(CDR1)、51-57(CDR2)和93-102(CDR3),VL中的CDR胺基酸殘基編號大致為27-32(CDR1)、50-52(CDR2)和89-97(CDR3)。遵循IMGT規則,抗體的CDR區可以使用程序IMGT/DomainGap Align確定。除非另有說明,本披露實施例涉及的抗體可變區和CDR序列均適用“Kabat”編號規則。
術語“特異性結合”、“選擇性結合”、“選擇性地結合”和“特異性地結合”是指抗體對預先確定的抗原上的表位的結合。通常,抗體以大約小於10-8M,例如大約小於10-9M、10-10M、10-11M、10-12M或更小的親和力(KD)
結合。
術語“KD”是指特定抗體-抗原相互作用的解離平衡常數。通常,本披露的抗體以小於大約10-7M,例如小於大約10-8M或10-9M的解離平衡常數(KD)結合抗原,例如,在本披露中抗體與細胞表面抗原的親和力採用FACS法測定KD值。
本披露中可互換使用的“多核苷酸”或“核酸分子”指任意長度的核苷酸聚合物,且包括DNA和RNA。核苷酸可以是脫氧核糖核苷酸、核糖核苷酸、修飾的核苷酸或鹼基、和/或其類似物,或可以藉由DNA或RNA聚合酶或藉由合成反應摻入聚合物的任意受質。多核苷酸可以包含修飾的核苷酸,如甲基化的核苷酸及其類似物。如果存在,則對核苷酸結構的修飾可以在組裝聚合物之前或之後進行。核苷酸的序列可以由非核苷酸成分中斷。
本披露中所述的“有效連接的”指兩種或多種成分的並列,其中該成分處於允許它們以其預期方式發揮作用的關係中。例如,如果啟動子順式作用來控制或調節所連接的序列的轉錄,則它與編碼序列有效連接。通常,但並非必然,“有效連接的”DNA序列是相鄰的,且在有必要連接兩個蛋白質編碼區時或在分泌前導序列的情況下是相鄰和符合可讀框的。但是,雖然有效連接的啟動子通常位於編碼序列的上游,但它並非必然與它相鄰。有效連接的增強子可以位於編碼序列上游、編碼序列內或編碼序列下游,且距啟動子相當的距離。藉由本領域已知重組方法來實現連接,例如,使用PCR方法,藉由退火,或藉由在方便的限制位點處連接。如果不存在方便的限制位點,則按照常規實施使用合成的寡核苷酸銜接子或接頭。本披露中,信號肽與異源多肽的一種連接方式是直接連接。
本披露中所述的“宿主細胞”指已進行遺傳改變或能夠藉由引入外源多核苷酸(如重組質粒或載體)進行遺傳改變的細胞。應理解,這類術語旨在不僅指具體個體細胞,還指這種細胞的後代。由於連續世代中可發生由突變或環境影響引起的某些修飾,這種後代實際上可以與親本細胞不同,但仍包括在本披露所用的術語“宿主細胞”的範圍內。宿主細胞可以微生物(如真核微生物)或動物細胞,適當的微生物包括釀酒酵母(Saccharomyces cerevisiae)和畢赤酵母(Pichia pastoris);適當的動物宿主細胞系包括CHO(中國倉鼠卵巢細胞系)、293細胞和NS0細胞。
本披露中所述的“多肽”泛指來自任意細胞來源的具有超過約10個胺基酸的肽和蛋白質。“異源”多肽是對所利用的宿主細胞而言為外來的那些多肽,如藉由宿主細胞產生的人蛋白質。異源多肽可以是原核的或真核的,如哺乳動物的或人的。異源多肽可以是重組產生的多肽或重組多肽。
示例性異源多肽包括跨膜分子(例如受體,如受體酪胺酸激酶)或配體,如生長因子。示例性異源多肽包括諸如以下的分子:腎素;生長激素,包括人生長激素和牛生長激素;生長激素釋放因子;甲狀旁腺激素;促甲狀腺激素;脂蛋白;α 1-抗胰蛋白酶;胰島素A鏈;胰島素B鏈;胰島素原;促卵泡激素;降鈣素;黃體生成素;胰高血糖素;凝血因子,如因子VIIIC、因子IX、組織因子(TF)和von Willebrands因子;抗凝血因子,如蛋白C;心房鈉尿肽;肺表面活性劑;纖溶酶原激活物,如尿激酶或人尿或組織型纖溶酶原激活物(t-PA);鈴蟾肽;凝血酶;造血生長因子;腫瘤壞死因子-α和-β;腦啡肽酶;RANTES(regulated onactivation normally T-cell expressed and secreted);人巨噬細胞炎症蛋白(MIP-1-α);血清白蛋白,如人血清白蛋白;Muellerian抑制物質;鬆弛素A鏈;鬆弛素B鏈;
鬆弛素原;小鼠促性腺激素相關肽;微生物蛋白質,如β-內醯胺酶;DNA酶;IgE;細胞毒性T淋巴細胞相關抗原(CTLA),如CTLA-4;抑制素;激活蛋白;血管內皮生長因子(VEGF);激素或生長因子的受體;蛋白A或D;類風濕因子;神經營養因子,如骨衍生神經營養因子(BDNF),神經營養蛋白-3、-4、-5或-6(NT-3、NT-4、NT-5或NT-6),或神經生長因子如NGF β;血小板衍生生長因子(PDGF);成纖維細胞生長因子,如aFGF和bFGF;表皮生長因子(EGF);轉化生長因子(TGF),如TGF-α和TGF-β,包括TGF-β 1、TGF-β 2、TGF-β 3、TGF-β 4或TGF-β 5;胰島素樣生長因子-I和-II(IGF-I和IGF-II);des(1-3)-IGF-I(腦IGF-I),胰島素樣生長因子結合蛋白;CD蛋白,如CD3、CD4、CD8、CD19、CD20和CD40;促紅細胞生成素;骨誘導因子;免疫毒素;骨形態發生蛋白(BMP);干擾素,如干擾素-α、-β和-γ;集落刺激因子(CSF),例如M-CSF、GM-CSF和G-CSF;白介素(IL),例如IL-1至IL-10:超氧化物歧化酶;T-細胞受體;表面膜蛋白;衰變加速因子;病毒抗原,例如AIDS被膜的部分;轉運蛋白;歸巢受體;地址素;調節蛋白;整聯蛋白,如CD11a、CD11b、CD11c、CD18、ICAM、VLA-4和VCAM;腫瘤相關抗原,如HER2、HER3或HER4受體;及任意上列多肽的片段。
異源多肽也可以是抗體,示例性的,該抗體的靶標包括但不限於A33、BMPI、BMP2、BMP3B(GDFIO)、BMP4、BMP6、BMP8、CSFI(M-CSF)、CSF2(GM-CSF)、CSF3(G-CSF)、EPO、FGFI(aFGF)、FGF2(bFGF)、FGF3(int-2)、FGF4(HST)、FGF5、FGF6(HST-2)、FGF7(KGF)、FGF9、FGF10、FGF1 1、FGF12、FGF12B、FGF14、FGF16、FGF17、FGF19、FGF20、FGF21、FGF23、IGF1、IGF2、IFNAI、IFNA2、IFNA4、IFNA5、IFNA6、IFNA7、IFNBI、IFNG、IFNWI、FELI、FELI(EPSELON)、FELI(ZETA)、IL1A、IL1B、IL2、IL3、
IL4、IL5、IL6、IL7、IL8、IL9、IL10、IL11、IL12A、I L12B、IL13、IL14、IL15、I L16、IL17、IL17B、IL18、IL19、IL20、IL22、IL23、IL24、IL25、IL26、IL27、IL28A、IL28B、I L29、IL30、PDGFA、PDGFB、TGFA、TGFB1、TGFB2、TGFB3、LTA(TNF-b)、LTB、TNF(TNF-a)、TNFSF4(OX40配體)、TNFSF5(CD40配體)、TNFSF6(FasL)、TNFSF7(CD27配體)、TNFSF8(CD30配體)、TNFSF9(4-1BB配體)、TNFSFIO(TRAIL)、TNFSF1I(TRANCE)、TNFSF12(AP03L)、TNFSF13(April)、TNFSF13B、TNFSF14(HVEM-L)、TNFSF15(VEGI)、TNFSF18、HGF(VEGFD)、VEGF、VEGFB、VEGFC、ILIR1、IL1R2、IL1RL1、IL1RL2、IL2RA、IL2RB、IL2RG、IL3RA、IL4R、IL5RA、IL6R、IL7R、IL8RA、IL8RB、IL9R、ILIORA、ILIORB、IL1 1RA、IL12RB1、IL12RB2、IL13RA1、IL13RA2、IL15RA、IL17R、IL18R1、IL20RA、IL21R、IL22R、IL1HY1、IL1RAP、IL1RAPL1、IL1RAPL2、IL1RN、IL6ST、IL18BP、IL18RAP、IL22RA2、AIFI、HGF、LEP(瘦蛋白)、PTN、THPO、CCLI(I-309)、CCL2(MCP-1/MCAF)、CCL3(MIP-la)、CCL4(MIP-lb)、CCL5(RANTES)、CCL7(MCP-3)、CCL8(mcp-2)、CCLH(伊紅趨素(eotaxin))、CCL13(MCP-4)、CCL15(MIP-ld)、CCL16(HCC-4)、CCL17(TARC)、CCL18(PARC)、CCL19(MDP-3b)、CCL20(MIP-3a)、CCL21(SLC/exodus-2)、CCL22(MDC/STC-I)、CCL23(MPIF-I)、CCL24(MPIF-2/eotaxin-2)、CCL25(TECK)、CCL26(eotaxin-3)、CCL27(CTACK/ILC)、CCL28、CXCLI(GROI)、CXCL2(GR02)、CXCL3(GR03)、CXCL5(ENA-78)、CXCL6(GCP-2)、CXCL9(MIG)、CXCL10(IP 10)、CXCL1 1(I-TAC)、CXCL12(SDFI)、CXCL13、CXCL14、CXCL16、PF4(CXCL4)、PPBP(CXCL7)、CX3CL1(SCYDI)、SCYEI、XCLI(淋巴趨化素(lymphotactin))、
XCL2(SCM-lb)、BLRI(MDR15)、CCBP2(D6/JAB61)、CCR1(CKRI/HM145)、CCR2(mcp-IRB/RA)、CCR3(CKR3/CMKBR3)、CCR4、CCR5(CMKBR5/ChemR13)、CCR6(CMKBR6/CKR-L3/STRL22/DRY6)、CCR7(CKR7/EBII)、CCR8(CMKBR8/TERI/CKR-LI)、CCR9(GPR-9-6)、CCRLI(VSHKI)、CCRL2(L-CCR)、XCRI(GPR5/CCXCRI)、CMKLRI、CMKORI(RDCI)、CX3CR1(V28)、CXCR4、GPR2(CCRIO)、GPR31、GPR81(FKSG80)、CXCR3(GPR9/CKR-L2)、CXCR6(TYMSTR/STRL33/Bonzo)、HM74、IL8RA(IL8Ra)、IL8RB(IL8Rb)、LTB4R(GPR16)、TCPIO、CKLFSF2、CKLFSF3、CKLFSF4、CKLFSF5、CKLFSF6、CKLFSF7、CKLFSF8、BDNF、C5R1、CSF3、GRCCIO(CIO)、EPO、FY(DARC)、GDF5、HDFIA、DL8、PRL、RGS3、RGS13、SDF2、SLIT2、TLR2、TLR4、TREMI、TREM2、VHL、ABCFI、ACVRI、ACVRIB、ACVR2、ACVR2B、ACVRLI、AD0RA2A、蛋白聚醣聚合物(Aggrecan)、AGR2、AICDA、AIFI、AIGI、AKAPI、AKAP2、AMH、AMHR2、ANGPTI、ANGPT2、ANGPTL3、ANGPTL4、ANPEP、APC、APOCI、AR、AZGPI(鋅-a-糖蛋白)、A β、B7.1、B7.2、B7H3、BAD、BAFF(BLys)、BAGI、BAH、BCL2、BCL6、BDNF、BLNK、BLRI(MDR15)、BMPI、BMP2、BMP3B(GDFIO)、BMP4、BMP6、BMP8、BMPRIA、BMPRIB、BMPR2、BPAGI(網蛋白)、BRCAI、C19orflO(IL27w)、C3、C4A、C5、C5R1、CANTI、CASP1、CASP4、CAVI、CCBP2(D6/JAB61)、CCLI(1-309)、CCLII(eotaxin)、CCL13(MCP-4)、CCL15(MlP-ld)、CCL16(HCC-4)、CCL17(TARC)、CCL18(PARC)、CCL19(MIP-3b)、CCL2(MCP-1)、MCAF、CCL20(MIP-3a)、CCL21(MTP-2)、SLC、exodus-2、CCL22(MDC/STC-I)、CCL23(MPIF-1)、
CCL24(MPIF-2/eotaxin-2)、CCL25(TECK)、CCL26(eotaxin-3)、CCL27(CTACK/ILC)、CCL28、CCL3(MTP-la)、CCL4(MDP-lb)、CCL5(RANTES)、CCL7(MCP-3)、CCL8(mcp-2)、CCNAI、CCNA2、CCNDI、CCNEI、CCNE2、CCRI(CKRI/HM145)、CCR2(mcp-IRB/RA);CCR3(CKR3/CMKBR3)、CCR4、CCR5(CMKBR5/ChemR13)、CCR6(CMKBR6/CKR-L3/STRL22/DRY6)、CCR7(CKR7/EBII)、CCR8(CMKBR8/TERI/CKR-LI)、CCR9(GPR-9-6)、CCRLI(VSHKI)、CCRL2(L-CCR)、CD164、CD19、CD105、CDIC、CD20、CD200、CD22、CD24、CD28、CD3、CD33、CD37、CD38、CD3E、CD3G、CD3Z、CD4、CD40、CD40L、CD44、CD47、CD45RB、CD52、CD56、CD69、CD70、CD72、CD73、CD74、CD79A、CD79B、CD8、CD80、CD81、CD83、CD86、CDHI(E-鈣黏著蛋白)、CDH10、CDH12、CDH13、CDH18、CDH19、CDH20、CDH5、CDH7、CDH8、CDH9、CDK2、CDK3、CDK4、CDK5、CDK6、CDK7、CDK9、CDKNIA(p21Wapl/Cipl)、CDKNIB(p27Kipl)、CDKNIC、CDKN2A(P16INK4a)、CDKN2B、CDKN2C、CDKN3、CEA、CEBPB、CERI、CHGA、CHGB、幾丁質酶、CHST10、CKLFSF2、CKLFSF3、CKLFSF4、CKLFSF5、CKLFSF6、CKLFSF7、CKLFSF8、CLDN3、CLDN7、Claudin18.2、CLN3、CLU(簇蛋白)、c-Met、CMKLRI、CMKORI(RDCI)、CNRI、COL18A1、COLIAI、COL4A3、COL6A1、CR2、Cripto、CRP、CSFI(M-CSF)、CSF2(GM-CSF)、CSF3(GCSF)、CTGF、CTLA4、CTNNBI(b-聯蛋白)、CTSB(組織蛋白酶B)、CX3CL1(SCYDI)、CX3CR1(V28)、CXCLI(GROI)、CXCL10(IP-10)、CXCLII(l-TAC/IP-9)、CXCL12(SDFI)、CXCL13、CXCL14、CXCL16、CXCL2、(GR02)、
CXCL3(GR03)、CXCL5(ENA-78/LIX)、CXCL6(GCP-2)、CXCL9(MIG)、CXCR3(GPR9/CKR-L2)、CXCR4、CXCR6(TYMSTR/STRL33/Bonzo)、CYB5、CYCI、CYSLTRI、DAB2IP、DES、DKFZp451J01 18、DNCLI、DPP4、E2F1、ECGFI、EDGI、EFNAI、EFNA3、EFNB2、EGF、EGFR、ELAC2、ENG、EN01、EN02、EN03、EpCAM、EPHB4、EPO、ERBB2(Her-2)、ERBB3(Her-3)、ERBB4(Her-4)、EREG、ERK8、ESRI、ESR2、F3(TF)、FADD、FasL、FASN、FCERIA、FCER2、FCGR3A、FGF、FGFI(aFGF)、FGF10、FGF1 1、FGF12、FGF12B、FGF13、FGF14、FGF16、FGF17、FGF18、FGF19、FGF2(bFGF)、FGF20、FGF21、FGF22、FGF23、FGF3(int-2)、FGF4(HST)、FGF5、FGF6(HST-2)、FGF7(KGF)、FGF8、FGF9、FGFR3、FIGF(VEGFD)、FELI(EPSILON)、FILI(ZETA)、FLJ12584、FLJ25530、FLRTI(纖連蛋白)、FLTI、FOS、FOSLI(FRA-I)、FY(DARC)、G250、GABRP(GABAa)、GAGEBI、GAGECI、GALNAC4S-6ST、GAT A3、GDF5、GFI 1、GGT1、GM-CSF、GNASI、GNRHI、GPR2(CCRIO)、GPR31、GPR44、GPR81(FKSG80)、GRCCIO(CIO)、GRP、GPNMB、GSN(絨毛蛋白)、GSTPI、HAVCR2、HDAC4、HDAC5、HDAC7A、HDAC9、HGF、HIFIA、HDPI、組胺和組胺受體、HLA-A、HLA-DRA、HM74、HMOXI、HUMCYT2A、ICEBERG、ICOSL、ID2、IFN-a、IFNAI、IFNA2、IFNA4、IFNA5、IFNA6、IFNA7、IFNB1、IFN γ、DFNWI、IGBPI、IGFI、IGFIR、IGF2、IGFBP2、IGFBP3、IGFBP6、IL-I、IL10、MORA、IL10RB、IL1 1、IL1 1RA、IL-12、IL12A、IL12B、IL12RB1、IL12RB2、IL13、IL13RA1、IL13RA2、IL14、IL15、IL15RA、IL16、IL17、IL17B、IL17C、IL17R、IL18、IL18BP、IL18R1、IL18RAP、IL19、IL1A、IL1B、ILIF10、IL1F5、IL1F6、
IL1F7、IL1F8、IL1F9、IL1HYI、IL1R1、IL1R2、IL1RAP、IL1RAPL1、IL1RAPL2、IL1RL1、IL1RL2、ILIRN、IL2、IL20、IL20RA、IL21R、IL22、IL22R、IL22RA2、IL23、IL24、IL25、IL26、IL27、IL28A、IL28B、IL29、IL2RA、IL2RB、IL2RG、IL3、IL30、IL3RA、IL4、IL4R、IL5、IL5RA、IL6、IL6R、IL6ST(糖蛋白130)、EL7、EL7R、EL8、EphA2、IL8RA、DL8RB、IL8RB、DL9、DL9R、DLK、INHA、INHBA;INSL3、INSL4、IRAKI、整合素(Integrin)、ERAK2、ITGAI、ITGA2、ITGA3、ITGA6(a6整聯蛋白)、ITGAV、ITGB3、ITGB4(b4整聯蛋白)、JAGI、JAKI、JAK3、JUN、K6HF、KAN、KDR、KITLG、KLF5(GC Box BP)、KLF6、KLKIO、KLK12、KLK13、KLK14、KLK15、KLK3、KLK4、KLK5、KLK6、KLK9、KRT1、KRT19(角蛋白19)、KRT2A、KHTHB6(毛髮特異性H型角蛋白)、LAG3、LAMAS、LEP(瘦蛋白)、Lewis Y、Lingo-p75、Lingo-Troy、LPS、LTA(TNF-b)、LTB、LTB4R(GPR16)、LTB4R2、LTBR、MACMARCKS、MAG或Omgp、MAP2K7(c-Jun)、MDK、間皮素(Mesothelin)、MIBI、MUCl、中期因子、MEF、MIP-2、MKI67、(Ki-67)、MMP2、MMP9、MS4A1、MSMB、MT3(金屬硫蛋白(metallothionectin)-lll)、MTSSI、MUCI(黏蛋白)、MYC、MYD88、NCK2、神經蛋白聚醣(neurocan)、NFKBI、NFKB2、NGFB(NGF)、NGFR、NgR-Lingo、NgR-Nogo66(Nogo)、NgR-p75、NgR-Troy、NMEI(NM23A)、N0X5、NPPB、NROBI、NR0B2、NRIDI、NR1D2、NR1H2、NR1H3、NR1H4、NR1I2、NR1I3、NR2C1、NR2C2、NR2E1、NR2E3、NR2F1、NR2F2、NR2F6、NR3C1、NR3C2、NR4A1、NR4A2、NR4A3、NR5A1、NR5A2、NR6A1、NRPI、NRP2、NT5E、NTN4、ODZI、OPRDI、P2RX7、PAP、PARTI、PATE、PAWR、PCA3、PCNA、PCSK9、PD-
1、PD-L1、PDGFA、PDGFB、PECAMI、PF4(CXCL4)、PGF、PGR、磷酸聚醣(phosphacan)、PIAS2、PIK3CG、PLAU(uPA)、PLG、PLXDCI、PPBP(CXCL7)、PPID、PRI、PRKCQ、PRKDI、PRL、PROC、PROK2、PSAP、PSCA、PSMA、PTAFR、PTEN、PTGS2(COX-2)、PTN、RAC2(p21Rac2)、RARB、RGSI、RGS13、RGS3、RNFIIO(ZNF144)、ROB02、S100A2、SCGB1D2(親脂素B)、SCGB2A1(乳腺球蛋白(mammaglobin)2)、SCGB2A2(mamnnaglobin 1)、SCYEI(內皮單核細胞激活細胞因子)、SDF2、SERPINAI、SERPINA3、SERP1NB5(乳腺絲抑蛋白)、SERPINEI(PAI-I)、SERPDMF1、SHBG、SLA2、SLC2A2、SLC33A1、SLC43A1、SLC44A4、SLIT2、SOST、SPPI、SPRRIB(Sprl)、ST6GAL1、STABI、STAT6、STEAP、STEAP2、TB4R2、TBX21、TCPIO、TDGFI、TEK、TGFA、TGFBI、TGFBIII、TGFB2、TGFB3、TGFBI、TGFBRI、TGFBR2、TGFBR3、THIL、THBSI(血小板反應蛋白-1)、THBS2、THBS4、THPO、TIE(Tie-1)、TIGHT、生腱蛋白(Tenascin)-C、TMP3、組織因子、TLRIO、TLR2、TLR3、TLR4、TLR5、TLR6、TLR7、TLR8、TLR9、TNF、TNF-a、TNFAEP2(B94)、TNFAIP3、TNFRSFIIA、TNFRSFIA、TNFRSFIB、TNFRSF21、TNFRSF5、TNFRSF6(Fas)、TNFRSF7、TNFRSF8、TNFRSF9、TNFSFIO(TRAIL)、TNFSFI 1(TRANCE)、TNFSF12(AP03L)、TNFSF13(April)、TNFSF13B、TNFSF14(HVEM-L)、TNFSF15(VEGI)、TNFSF18、TNFSF4(OX40配體)、TNFSF5(CD40配體)、TNFSF6(FasL)、TNFSF7(CD27配體)、TNFSF8(CD30配體)、TNFSF9(4-1BB配體)、TOLLIP、Toll樣受體、TOP2A(拓撲異構酶Ea)、TP53、TPMI、TPM2、TRADD、TRAFI、TRAF2、TRAF3、TRAF4、TRAF5、TRAF6、TREMI、TREM2、TRPC6、TSLP、TWEAK、VEGF、VEGFB、VEGFC、VEGFR、多能聚
糖、VHL C5、VLA-4、XCLI(lymphotactin)、XCL2(SCM-lb)、XCRI(GPR5/CCXCRI)、YYI、ZFPM2和凝血酶。
示例性的是,抗體選自曲妥珠單抗(Trastuzumab)、帕妥珠單抗(Pertuzumab)、尼妥珠單抗(Nimotuzumab)、恩諾妥珠單抗(Enoblituzumab)、依米妥珠單抗(Emibetuzumab)、因妥珠單抗(Inotuzumab)、匹那妥珠單抗(Pinatuzumab)、本妥昔單抗(Brentuximab)、吉妥珠單抗(Gemtuzumab)、必法妥珠單抗(Bivatuzumab)、洛法妥珠單抗(Lorvotuzumab)、cBR96、格來木單抗(Glematumamab)和抗Claudin18.2抗體,其中該抗Claudin18.2抗體的重鏈如SEQ ID NO:49所示,輕鏈如SEQ ID NO:47所示。
“保守修飾”或“保守置換或取代”是指具有類似特徵(例如電荷、側鏈大小、疏水性/親水性、主鏈構象和剛性等)的其它胺基酸置換蛋白中的胺基酸,使得可頻繁進行改變而不改變蛋白的生物學活性。所屬技術領域具有通常知識者知曉,一般而言,多肽的非必需區域中的單個胺基酸置換基本上不改變生物學活性(參見例如Watson等(1987)Molecular Biology of the Gene,The Benjamin/Cummings Pub.Co.,第224頁,(第4版))。另外,結構或功能類似的胺基酸的置換不大可能破環生物學活性。示例性保守取代於下方陳述。
本披露中所述的“末端延伸比率”是指表達產物群體中,具有末端延伸序列的表達產物所占的比率。具有末端延伸序列的表達產物是目標表達產物的變體,其除具有所期望的目標序列外,還連接有其他胺基酸殘基。示例性的,抗體輕鏈表達產物中,1%的輕鏈序列變體的N末端還連接有其他胺基酸殘基,則該表達產物的末端延伸比率為1%。當表達產物群體中含有具有末端延伸序列的表達產物時,即表示該表達產物群體具有末端異質性。示例性地,本披露中的末端延伸序列來源於信號肽胺基酸的殘留。
本披露中的組成物包含所期望的目標表達產物及具有末端延伸序列的表達產物。組成物中胺基末端延伸的存在可藉由多種分析技術來檢測,包括但不限於N-末端序列分析、電荷異質性的測定法(例如陽離子交換層析或毛細管區帶電泳)、質譜、肽圖檢測等。組成物中抗體變體的量通常在如下範圍內,從構成用於檢測變體的任何測定法(例如陽離子交換分析)的檢測下限的量至少於主要種類抗體量的量。組成物中約3%或更少(例如約3%、2.5%、2%、1.5%、1%、0.5%、0%)的抗體輕鏈或抗體重鏈包含胺基末端延伸。這樣的百分比量可以藉由質譜、肽圖檢測法來測定。當樣品內含有末端延伸的異源多肽比例超過總量1%時,可以基於肽圖檢測法有效的將其鑑定出,並同時對還原分子量質譜檢測峰圖中對應的峰進行定量標識。
在以上說明書中提出了本披露一種或多種實施方式的細節。雖然可使用與本文所述類似或相同的任何方法和材料來實施或測試本披露,但是以下描述的方法和材料。藉由說明書和申請專利範圍,本披露的其他特點、目的和優點將是顯而易見的。在說明書和申請專利範圍中,除非上下文中有清楚的另外指明,單數形式包括複數指代物的情況。除非另有定義,本文使用的所有技術和
科學術語都具有本披露所屬技術領域具有通常知識者所理解的一般含義。說明書中引用的所有專利和出版物都藉由引用納入。提出以下實施例是為了更全面地說明本披露的可選實施方式。這些實施例不應以任何方式理解為限制本披露的範圍,本披露的範圍由申請專利範圍限定。
實施例
以下結合實施例進一步描述本披露,但這些實施例並非限制著本披露的範圍。本披露實施例中未註明具體條件的實驗方法,通常按照常規條件,如冷泉港的抗體技術實驗手冊,分子選殖手冊;或按照原料或商品製造廠商所建議的條件。未註明具體來源的試劑,為市場購買的常規試劑。
實施例1:抗claudin18.2抗體的製備
實施例1-1:構建高表達Claudin18.2的細胞株
用Lipofectamine 3000轉染試劑,將pCDH-hClaudin18.2慢病毒表達載體質粒與pVSV-G,pCMV-dR8.91慢病毒系統包裝載體轉染至病毒包裝細胞293T中;收集含有病毒的培養基上清,過濾並進行超高速離心;使用濃縮後的病毒感染人胃印戒細胞癌細胞株NUGC4,經嘌呤黴素篩選兩至三週,再進行FACS單細胞分選。
根據腫瘤IHC評分來區分Claudin18.2表達程度。與腫瘤IHC評分為3分的腫瘤Claudin18.2表達水平相當的細胞為高表達細胞,與腫瘤IHC評分為2分的腫瘤Claudin18.2表達水平相當的細胞為中等表達細胞。根據藉由FACS檢測慢病毒感染的NUGC4細胞表面的Claudin18.2表達,挑選出Claudin18.2表達量高的
NUGC4/hClaudin18.2單純株細胞株。同時藉由FACS檢測野生型NUGC4細胞表面的Claudin18.2表達,挑選出Claudin18.2表達量中等的NUGC4純株細胞株,野生型NUGC4為Claudin18.2低表達量細胞。
將挑選出的單純株細胞株擴大培養,凍存備庫以便後續實驗。
實施例1-2:抗人claudin18.2單株抗體產生
1 免疫
藉由免疫小鼠產生抗人Claudin18.2單株抗體。
實驗用SJL白小鼠,雌性,6-8週齡(北京維通利華實驗動物技術有限公司,動物生產許可證號:SCXK(京)2012-0001)。飼養環境:SPF級。小鼠購進後,實驗室環境飼養1週,12/12小時光/暗週期調節,溫度20-25℃;濕度40-60%。將已適應環境的小鼠按以下方案免疫。免疫抗原為huClaudin18.2-HEK293細
胞(轉染人Claudin18.2質粒的HEK-293穩轉細胞株)。
免疫方案:首次免疫細胞前,用TiterMax® Gold Adjuvant(Sigma Cat No.T2684)0.1ml/隻注射小鼠腹膜內(IP);半小時後每隻小鼠腹膜內(IP)注射0.1ml生理鹽水稀釋至1×108/ml濃度的細胞液。細胞吹散均勻後進行接種,時間為第0、14、28、42、56天。於第21、35、49、63天取血,用ELISA方法確定小鼠血清中的抗體滴度。在第4-5次免疫以後,選擇血清中抗體滴度高並且滴度趨於平臺的小鼠進行脾細胞融合。在進行脾細胞融合前3天加強免疫,腹膜內(IP)注射1×107細胞。
2 脾細胞融合
採用PEG介導的融合步驟將脾淋巴細胞與骨髓瘤細胞Sp2/0細胞(ATCC® CRL-8287TM)進行融合得到融合瘤細胞。融合瘤細胞以0.5-1×106/ml的密度用完全培養基(含20% FBS、1×HAT、1×OPI的IMDM培養基)重新懸浮,100μl/孔種於96孔板中,37℃,5%CO2孵育3-4天後,補充HAT完全培養基100μl/孔,繼續培養3-4天至形成純株。去除上清,加入200μl/孔的HT完全培養基(含20%FBS、1×HT和1×OPI的IMDM培養基),37℃,5%CO2培養3天後進行ELISA檢測。
3 融合瘤細胞篩選
根據融合瘤細胞生長密度,用結合ELISA方法檢測培養上清。選擇與huClaudin18.2-HEK293細胞結合能力強,同時與HEK293細胞沒有結合的細胞,及時進行擴增凍存;經過二到三次亞選殖直至獲得單細胞純株。
每次亞選殖細胞均需進行細胞結合實驗。藉由以上實驗篩選得到融合瘤純株,用無血清細胞培養法進一步製備抗體,純化抗體,供在檢測例中使用。
實施例1-3:鼠源抗體的人源化
挑選出體外活性高的單純株融合瘤細胞株mAb1901,mAb1902;選殖其中的單株抗體序列,再進行人源化、重組表達和活性評價。
從融合瘤中選殖序列的過程如下。收集對數生長期融合瘤細胞,用Trizol(Invitrogen,15596-018)提取RNA(按照試劑盒說明書步驟)並進行反轉錄(PrimeScriptTM Reverse Transcriptase,Takara,cat # 2680A)。將反轉錄得到的cDNA採用mouse Ig-Primer Set(Novagen,TB326 Rev.B 0503)進行PCR擴增,送測序公司測序。得到的DNA序列對應的胺基酸序列SEQ ID NO:3-6所示:
上述鼠源重鏈可變區和輕鏈可變區,分別與下述人IgG1抗體的重鏈恆定區和人源κ輕鏈恆定區連接,形成嵌合抗體ch1901和ch1902。
恆定區選自以下序列:
人源κ輕鏈恆定區:(SEQ ID NO:8)RTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC。
如本領域許多文獻公示的方法,對鼠源單株抗體進行人源化。簡言之,使用人恆定結構域替代親本(鼠源抗體)恆定結構域,根據鼠源抗體和人抗體的同源性選擇人種系抗體序列,進行CDR移植。本披露選擇活性好的候選分子進行人源化,結果如下。
1.鼠源抗體的CDR區
表2中VH/VL CDR的胺基酸殘基由Kabat編號系統確定並注釋。
鼠源抗體的CDR序列如表2所述:
2.選擇人種系FR區序列
在所獲得的鼠源抗體VH/VLCDR典型結構的基礎上,將重、輕鏈可變區序列與抗體Germline數據庫比較,獲得同源性高的人種系模板。其中人類種系輕鏈框架區來自人κ輕鏈基因。
2.1 mAb1901的人源化改造和回復突變設計
選擇適當的人抗體種系,對mAb1901鼠源抗體進行人源化改造,將鼠源抗體mAb1901的CDR區移植到選擇的人源化模板上,得到人源化可變區,其人源化重鏈可變區序列為SEQ ID NO:24和輕鏈可變區序列為SEQ ID NO:21;再與IgG恆定區重組,形成完整抗體。同時,對人源化抗體的V區中FR區進行回復突變,示例性回復突變方式及組合如下:
上表中對應重鏈可變區可與SEQ ID NO:7所示的人IgG1重鏈恆定區連接形成全長抗體的重鏈,輕鏈可變區與SEQ ID NO:8所示的人κ輕鏈恆定區連接形成全長抗體的輕鏈。在其他實施方案中,重鏈可變區和輕鏈可變區也可與其他重鏈恆定區和輕鏈恆定區分別連接形成全長抗體。
2.2 mAb1902的人源化改造和回復突變設計
選擇適當的人抗體種系,對mAb1902鼠源抗體進行人源化改造,將鼠源抗體mAb1902的CDR區移植到選擇的人源化模板上,得到人源化可變區,其人源化重鏈可變區序列為SEQ ID NO:31和輕鏈可變區序列為SEQ ID NO:28;再與IgG恆定區重組,形成完整抗體。同時,對人源化抗體的V區中FR區進行回復突變,示例性回復突變方式及組合如下:
上表中對應重鏈可變區與SEQ ID NO:7所示的人IgG1重鏈恆定區連接形成全長抗體的重鏈,輕鏈可變區與SEQ ID NO:8所示的人κ輕鏈恆定區連接形成全長抗體的輕鏈。
示例性的,抗體全長序列如下:
嵌合抗體ch1901:
嵌合抗體ch1902:
全長抗體輕重鏈序列如下所示:
全長抗體輕重鏈序列如下所示:
本披露陽性對照抗體為IMAB-362(來自WO2016166122):
用常規的基因選殖、重組表達的方法分別選殖、表達、純化上述抗體。
測試例1:抗claudin18.2抗體的體外活性生物學評價
測試例1-1:Cell水平ELISA結合實驗
基於細胞的ELISA實驗被用來檢測Claudin18.2抗體的結合特性。將穩轉表達Claudin18.2的NUGC4細胞培養於96孔細胞板(Corning,3599)中,待生長至90%密度時加入4%多聚甲醛固定細胞1小時,用PBST緩衝液(pH 7.4 PBS含0.05% Tween-20)洗板3次後,加入用PBS稀釋的5%脫脂牛奶(光明脫脂奶粉)封閉液200μl/孔,37℃孵育箱孵育2.5小時或4℃放置過夜(16-18小時)進行封閉。封閉結束後,棄去封閉液,並用PBST緩衝液洗板3次後,加入50μl/孔用樣品稀釋液(pH7.4 PBS含1%脫脂乳)稀釋的不同濃度待測抗體,放於37℃孵育箱孵育2小時。孵育結束後用PBST洗板5次,加入100μl/孔用樣品稀釋液稀釋的HRP標記的羊抗入二抗(Jackson Immuno Research,109-035-003),37℃孵育1小時。用PBST洗板6次後,加入50μl/孔TMB顯色受質(KPL,52-00-03),於室溫孵育10-15min,加入50μl/孔1M H2SO4終止反應,用MD Versa Max TM酶標儀在450nm處讀取吸收值,計算Claudin18.2抗體對Claudin18.2的結合EC50值(結果見下表)。
測試例1-2:抗體細胞水平結合實驗
將穩轉表達Claudin18.2的NUGC4細胞用FACS緩衝液(2%胎牛血清(Gibco,10099141)pH7.4 PBS(Sigma,P4417-100TAB))製備成1×106/ml的細胞懸液,100μl/孔加入96孔圓底板(Corning,3795)中。離心去除上清後加入50μl/孔用FACS緩衝液稀釋的不同濃度待測Claudin18.2抗體,放於4℃冰箱中避光孵育1小時。以FACS緩衝液300g離心洗滌3次後,加入工作濃度的Alexa Fluor 488包被的抗人IgG(H+L)(invitrogen,A-11013),放於4℃冰箱中避光孵育40分鐘。以FACS緩衝液300g離心洗滌3次後,在BD FACS CantoII流式細胞儀上檢測幾何平均
數螢光強度,計算Claudin18.2抗體對穩轉表達Claudin18.2的NUGC4細胞的結合EC50值,結果見圖1。
測試例1-3:抗體內吞實驗
將預標記了DyLight 488 NHS Ester(thermofisher,46403)的待測Claudin18.2抗體,以5μg/ml終濃度加入1×106/ml穩轉表達Claudin18.2的NUGC4細胞中,放於冰上避光孵育1小時,以預冷的FACS緩衝液(pH7.4 PBS,2%胎牛血清)離心洗滌3次,去上清後加入預熱的完全培養基,放入37℃ 5% CO2細胞培養箱。分別在0、0.5、1、2、4小時後取出細胞,放置於冰上避光保存。待樣品全部收集後,300g低溫離心去除上清,加入沖提緩衝液(pH1.7 0.05M甘胺酸,0.1M氯化鈉)後,室溫孵育7分鐘,以FACS緩衝液300g離心洗滌1次,在BD FACS CantoII流式細胞儀上檢測幾何平均數螢光強度,計算Claudin18.2抗體對穩轉表達Claudin18.2的NUGC4細胞的內吞效率。結果顯示(見圖2),人源化抗體具有良好的細胞內吞效率。
測試例1-4:基於流式細胞技術測定抗體親和力
實驗當天收集HEK293/hClaudin18.2細胞於U底96孔板中,每孔1×105至2×105個細胞。加入起始濃度5μg/ml,2×梯度稀釋(12個濃度點)的Claudin18.2抗體,4℃孵育1小時,陽性對照為IMAB362,同時設置不加抗體的陰性對照。離心去除抗體,再加入100μl/孔FITC抗人IgG Fc抗體(200×),4℃避光孵育30分鐘,用PBS+2%FBS清洗兩遍後準備進行流式細胞檢測。啟動BD FACS CantoII,預熱完成後打開BD FACSDiva軟體,建立一個新的實驗,檢測HEK293/hClaudin18.2陰
性對照樣品,調節FSC及SSC電壓至適當的數值並保存。根據QuantumTM FITC-5 MESF Kit說明書,分別檢測空白樣品B及標準曲線1,調節FITC電壓至適當的數值並保存。在保存的電壓下檢測U底96孔板中的樣品,記錄數據。使用Flowjo軟體分析實驗數據得到Geo Mean數值,根據QuantumTM FITC-5 MESF Kit說明書擬合MESF-Geo Mean標準曲線,根據FITC抗人IgG Fc抗體的濃度螢光值計算出與HEK293/hClaudin18.2細胞結合的Claudin18.2抗體的莫耳濃度及游離抗體濃度,利用Scatchard作圖法計算抗體的Bmax和解離常數KD。結果見表13。
測試例1-5:抗體的ADCC效應評價
消化各種NUGC4細胞(高中低表達Claudin18.2),1000rpm離心後,重新懸浮計數。將細胞以3×105細胞/ml的密度重新懸浮在添加10% FBS(新西蘭超低IgG胎牛血清,Gibco,1921005PJ)的無酚紅RPMI 1640中(Gibco,11835-030)。在96孔板(Corning,3903)中,每孔加入25μl細胞(7500個/孔)。將抗體稀釋在上述無酚紅培養基中,配製成3×的抗體稀釋液,向細胞板中加入25μl/孔的抗體。在37℃、5% CO2培養箱中孵育0.5小時。
收集效應細胞(FcrR3A-V158-NFAT-RE-Jurkat細胞),1000rpm離心後,重新懸浮計數。將細胞以3×106細胞/ml的密度重新懸浮在添加10%FBS(新西蘭超低IgG胎牛血清)的無酚紅RPMI 1640中,在實驗板中每孔加入25μl細胞(7.5×104個細胞/孔)。在37℃、5% CO2培養箱中孵育6小時。
向實驗板的每個孔中加入75μl/孔的Bright-Glo(Promega,E2610),用酶標儀(PerkinElmer,VITOR3)檢測化學發光(luminescence)。
結果顯示(見表14和圖3A至圖3C),在低中高不同程度Claudin18.2表達的NUGC4細胞中,抗體h1901-11和h1902-5均顯示出很強的ADCC活性。
實施例2:信號肽的設計與應用
實施例2-1:融合不同信號肽的帕妥珠單抗(Pertuzumab)的設計與表達
設計融合如下信號肽的抗體,其信號肽序列組合如下:
1.MEWSWVFLFFLSVTTGVHS(SEQ ID NO:152)與
MSVPTQVLGLLLLWLTDARC(SEQ ID NO:153)
2.MEWSWVFLFFLSVTTGVHS(SEQ ID NO:152)與
MEWSWVFLFFLSVTTGVHS(SEQ ID NO:152)
3.MEWSWVFLFFLSLTGVHA(SEQ ID NO:57)與
MSVPTQVLGLLLLWLTDVRA(SEQ ID NO:105)
4.MEWSWVFLFFLSLTGVHA(SEQ ID NO:57)與
MEWSWVFLFFLSLTGVHA(SEQ ID NO:57)
5.MSVPTQVLGLLLLWLTDVRA(SEQ ID NO:105)與
MEWSWVFLFFLSLTGVHA(SEQ ID NO:57)
將上述信號肽組合,分別置於Pertuzumab抗體重、輕鏈胺基酸N端,並設計相應的新的重、輕鏈序列。所設計的序列如下:
Pertuzumab-2含信號肽的抗體重鏈胺基酸序列(SEQ ID NO:154)
Pertuzumab-4含信號肽的抗體重鏈胺基酸序列(SEQ ID NO:157)
Pertuzumab-5含信號肽的抗體輕鏈胺基酸序列(SEQ ID NO:159)
(備註:下劃線為信號肽。)
基於上述Pertuzumab-1至Pertuzumab-4的序列合成各重鏈和輕鏈的基因片段,將重鏈基因選殖到PXC18.4形成重鏈質粒,輕鏈基因選殖到PXC17.4形成輕鏈質粒。藉由質粒中的相同酶切位點,將輕鏈質粒選殖至重鏈質粒中,並構建出全長抗體質粒。將全長抗體質粒直接電轉CHO細胞,經篩選後獲得了包含該質粒的穩轉細胞。培養穩轉細胞,將培養後的上清用Protein A親和管柱進行純化,
獲得表達產物。
實施例2-2:融合不同信號肽的h1902-5的設計與表達
設計融合如下信號肽的抗體,其信號肽序列組合如下:
1.MEWSWVFLFFLSVTTGVHS(SEQ ID NO:152)與
MEWSWVFLFFLSVTTGVHS(SEQ ID NO:152)
2.MEWSWVFLFFLSLTGVHA(SEQ ID NO:57)與
MSVPTQVLGLLLLWLTDVRA(SEQ ID NO:105)
3.MSVPTQVLGLLLLWLTDVRA(SEQ ID NO:105)與
MEWSWVFLFFLSLTGVHA(SEQ ID NO:57)與
將上述信號肽組合,分別置於h1902-5抗體重鏈、輕鏈N端,並設計相應的新的重、輕鏈序列。所設計的序列如下:
(備註:下劃線為信號肽。)
基於上述的h1902-5-1或h1902-5-2的序列合成各重鏈和輕鏈的基因片段,將其構建到表達載體上獲得全長抗體質粒。將全長抗體質粒直接電轉CHO細胞,經篩選後獲得了包含該質粒的穩轉細胞。培養穩轉細胞,將培養後的上清用Protein A親和管柱進行純化,獲得表達產物。
實施例2-3:融合不同信號肽的FcRn的設計與表達
抗FcRn抗體重、輕鏈胺基酸序列如下:
設計融合如下信號肽的抗體,其信號肽序列組合如下:
1.MEWSWVFLFFLSVTTGVHS(SEQ ID NO:152)與
MEWSWVFLFFLSVTTGVHS(SEQ ID NO:152)
2.MEWSWVFLFFLSLTGVHA(SEQ ID NO:57)與
MEWSWVFLFFLSLTGVHA(SEQ ID NO:57)
所設計的序列如下:
基於FcRn-1和FcRn-2的序列合成各重鏈和輕鏈的基因片段,將其構建到表達載體上獲得全長抗體質粒。將全長抗體質粒直接電轉CHO細胞,經篩選後獲得了包含該質粒的穩轉細胞池。培養穩轉細胞池,將培養後的上清用Protein A親和管柱進行純化,獲得表達產物。
測試例2:採用不同信號肽的表達產物的末端異質性
測試例2-1:融合不同信號肽的Pertuzumab去糖還原分子量及胺基酸序列檢測
藉由PNGase F糖苷酶(NEB,P0708)切除Pertuzumab-1、Pertuzumab-2、Pertuzumab-3,Pertuzumab-4樣品所攜帶的N-糖基,再經DTT(Sigma,43815)還原成輕、重鏈,最後由LC-MS(Waters,ACQUITY UPLC H-Class/XeVo G2-XS QTOF)對樣品的去糖還原分子量進行檢測,並藉由UNIFI軟體進行數據處理及分析。
Pertuzumab-1及Pertuzumab-3的檢測結果如圖4A至圖4D所示:
Pertuzumab-1樣品中檢測到輕鏈中含有4.7%信號肽胺基酸(RC)殘留;而Pertuzumab-3樣品中輕鏈無信號肽胺基酸殘留。Pertuzumab-1及Pertuzumab-3的重鏈均未檢測到信號肽胺基酸殘留,僅有少量糖化修飾。
Pertuzumab-1經尿素變性處理後,加入DTT還原成輕、重鏈,之後加入Glu C酶(Promega,V1651)進行酶切,所得樣品經LC-MS採集分子量數據,所獲得的數據藉由UNIFI軟體進行分析,得到樣品的胺基酸序列信息。
結果顯示Pertuzumab-1中在去糖還原分子量檢測中所出現的異常峰,經肽圖分析驗證,確認為RC胺基酸殘留。具體結果如表15所示。
Pertuzumab-2及Pertuzumab-4的檢測結果如圖5A至圖5D所示:Pertuzumab-2樣品中檢測到輕鏈中含有5.8%信號肽胺基酸(VHS)殘留;而Pertuzumab-4樣品中輕鏈無信號肽胺基酸殘留。兩種抗體重鏈均未檢測到信號肽胺基酸殘留,僅有少量糖化修飾。
Pertuzumab-2經尿素變性處理後,加入DTT還原成輕、重鏈,之後加入Glu C酶進行酶切,所得樣品經LC-MS採集分子量數據,所獲得的數據藉由
UNIFI軟體進行分析,得到樣品的胺基酸序列信息。
結果顯示,Pertuzumab-2中在去糖還原分子量檢測中所出現的異常峰,經肽圖分析驗證,確認為VHS胺基酸殘留。具體結果如表16顯示。
測試例2-2:融合不同信號肽的h1902-5去糖還原分子量及胺基酸序列檢測
藉由PNGase F糖苷酶(NEB,P0708)切除h1902-5-1、h1902-5-2樣品所攜帶的N-糖基,再經DTT(Sigma,43815)還原成輕、重鏈,最後由LC-MS(Waters,ACQUITY UPLC H-Class/XeVo G2-XS QTOF)對樣品的去糖還原分子量進行檢測,並藉由UNIFI軟體進行數據處理及分析。
結果如圖6A至圖6D所示,h1902-5-1樣品中檢測到重鏈中含有3.1%信號肽胺基酸(VHS)殘留;而h1902-5-2樣品中重鏈無信號肽胺基酸殘留。兩種抗體輕鏈均未檢測到信號肽胺基酸殘留,僅有少量糖化修飾。
h1902-5-1經尿素變性處理後,加入DTT還原成輕、重鏈,之後加入Glu C酶進行酶切,所得樣品經LC-MS採集分子量數據,所獲得的數據藉由UNIFI軟體進行分析,得到樣品的胺基酸序列信息。
結果顯示,h1902-5-1中於去糖還原分子量檢測中所出現的異常峰,
經肽圖分析驗證,確認為VHS胺基酸殘留。具體結果如下表17顯示。
測試例2-3:融合不同信號肽的抗FcRn抗體去糖還原分子量及胺基酸序列檢測
藉由PNGase F糖苷酶(NEB,P0708)切除FcRn-1、FcRn-2樣品所攜帶的N-糖基,再經DTT(Sigma,43815)還原成輕、重鏈,最後由LC-MS(Waters,ACQUITY UPLC H-Class/XeVo G2-XS QTOF)對樣品的去糖還原分子量進行檢測,並藉由UNIFI軟體進行數據處理及分析。
結果如圖7A至圖7D所示,FcRn-1樣品中檢測到重鏈中含有3.4%信號肽胺基酸(VHS)殘留;而FcRn-2樣品中重鏈無信號肽胺基酸殘留。兩種抗體輕鏈均未檢測到信號肽胺基酸殘留,僅有少量糖化修飾。
FcRn-1經尿素變性處理後,加入DTT還原成輕、重鏈,之後加入Glu C酶進行酶切,所得樣品經LC-MS採集分子量數據,所獲得的數據藉由UNIFI軟體進行分析,得到樣品的胺基酸序列信息。
結果顯示,FcRn-1中於去糖還原分子量檢測中所出現的異常峰,經肽圖分析驗證,確認為VHS胺基酸殘留。具體結果如下表顯示。
雖然為了清楚的理解,已經借助於附圖和實例詳細描述了上述發明,但是描述和實例不應當解釋為限制本披露的範圍。本文中引用的所有專利和科學文獻的公開內容藉由引用完整地清楚結合。
<110> 江蘇恆瑞醫藥股份有限公司(JIANGSU HENGRUI MEDICINE CO.,LTD.) 上海恆瑞醫藥有限公司(SHANGHAI HENGRUI PHARMACEUTICAL CO.,LTD.)
<120> 用於降低異源多肽末端異質性的信號肽
<130> 721100CPCT
<150> CN202010882873.5
<151> 2020-08-28
<150> CN202110958128.9
<151> 2021-08-20
<160> 172
<170> SIPOSequenceListing 1.0
<210> 1
<211> 261
<212> PRT
<213> 智人(Homo sapiens)
<220>
<221> 肽
<223> Claudin18.2蛋白
<400> 1
<210> 2
<211> 3350
<212> DNA
<213> 智人(Homo sapiens)
<220>
<221> 基因
<223> Claudin18.2
<400> 2
<210> 3
<211> 120
<212> PRT
<213> 鼠(Mus musculus)
<220>
<221> 結構域
<223> mAb1901鼠源抗體重鏈可變區
<400> 3
<210> 4
<211> 113
<212> PRT
<213> 鼠(Mus musculus)
<220>
<221> 結構域
<223> mAb1901鼠源抗體輕鏈可變區
<400> 4
<210> 5
<211> 118
<212> PRT
<213> 鼠(Mus musculus)
<220>
<221> 結構域
<223> mAb1902鼠源抗體重鏈可變區
<400> 5
<210> 6
<211> 113
<212> PRT
<213> 鼠(Mus musculus)
<220>
<221> 結構域
<223> mAb1902鼠源抗體輕鏈可變區
<400> 6
<210> 7
<211> 330
<212> PRT
<213> 智人(Homo sapiens)
<220>
<221> 結構域
<223> 人IgG1抗體的重鏈恆定區
<400> 7
<210> 8
<211> 107
<212> PRT
<213> 智人(Homo sapiens)
<220>
<221> 結構域
<223> 人源抗體κ輕鏈恆定區
<400> 8
<210> 9
<211> 5
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> mAb1901 HCDR1
<400> 9
<210> 10
<211> 17
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> mAb1901 HCDR2
<400> 10
<210> 11
<211> 11
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> mAb1901 HCDR3
<400> 11
<210> 12
<211> 17
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> mAb1901 LCDR1
<400> 12
<210> 13
<211> 7
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> mAb1901 LCDR2
<400> 13
<210> 14
<211> 9
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> mAb1901 LCDR3
<400> 14
<210> 15
<211> 5
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> mAb1902 HCDR1
<400> 15
<210> 16
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> mAb1902 HCDR2
<400> 16
<210> 17
<211> 9
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> mAb1902 HCDR3
<400> 17
<210> 18
<211> 17
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> mAb1902 LCDR1
<400> 18
<210> 19
<211> 7
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> mAb1902 LCDR2
<400> 19
<210> 20
<211> 9
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> mAb1902 LCDR3
<400> 20
<210> 21
<211> 113
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> VL1
<400> 21
<210> 22
<211> 113
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> VL2
<400> 22
<210> 23
<211> 113
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> VL3
<400> 23
<210> 24
<211> 120
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> VH1
<400> 24
<210> 25
<211> 120
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> VH2
<400> 25
<210> 26
<211> 120
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> VH3
<400> 26
<210> 27
<211> 120
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> VH4
<400> 27
<210> 28
<211> 113
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> VL11
<400> 28
<210> 29
<211> 113
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> VL12
<400> 29
<210> 30
<211> 113
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> VL13
<400> 30
<210> 31
<211> 118
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> VH11
<400> 31
<210> 32
<211> 118
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> VH12
<400> 32
<210> 33
<211> 118
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> VH13
<400> 33
<210> 34
<211> 118
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 結構域
<223> VH14
<400> 34
<210> 35
<211> 450
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> ch1901重鏈
<400> 35
<210> 36
<211> 220
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> ch1901輕鏈
<400> 36
<210> 37
<211> 448
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> ch1902重鏈
<400> 37
<210> 38
<211> 220
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> ch1902輕鏈
<400> 38
<210> 39
<211> 220
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> L1
<400> 39
<210> 40
<211> 220
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> L2
<400> 40
<210> 41
<211> 220
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> L3
<400> 41
<210> 42
<211> 450
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> H1
<400> 42
<210> 43
<211> 450
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> H2
<400> 43
<210> 44
<211> 450
<212> PRT
<213> 人工序列(Artificial Sequcnce)
<220>
<221> 鏈
<223> H3
<400> 44
<210> 45
<211> 450
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> H4
<400> 45
<210> 46
<211> 220
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> L11
<400> 46
<210> 47
<211> 220
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> L12
<400> 47
<210> 48
<211> 220
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> L13
<400> 48
<210> 49
<211> 448
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> H11
<400> 49
<210> 50
<211> 448
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> H12
<400> 50
<210> 51
<211> 448
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> H13
<400> 51
<210> 52
<211> 448
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> H14
<400> 52
<210> 53
<211> 448
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> IMAB-362重鏈
<400> 53
<210> 54
<211> 220
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> IMAB-362輕鏈
<400> 54
<210> 55
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<220>
<221> 未確定
<222> (16)..(16)
<223> Xaa是Val、Ala、Ser、Thr、Gly、Cys、Leu或Ile
<220>
<221> 未確定
<222> (18)..(18)
<223> Xaa是Ala、Gly、Ser、Cys、Thr或Gln
<400> 55
<210> 56
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<220>
<221> 未確定
<222> (18)..(18)
<223> Xaa是Val、Ala、Ser、Thr、Gly、Cys、Leu或Ile
<220>
<221> 未確定
<222> (20)..(20)
<223> Xaa是Ala、Gly、Ser、Cys、Thr或Gln
<220>
<221> 未確定
<222> (20)..(20)
<223> 当Xaa(18)是Ala时,Xaa(20)不是Cys
<400> 56
<210> 57
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 57
<210> 58
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 58
<210> 59
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 59
<210> 60
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 60
<210> 61
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 61
<210> 62
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 62
<210> 63
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 63
<210> 64
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 64
<210> 65
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 65
<210> 66
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 66
<210> 67
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 67
<210> 68
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 68
<210> 69
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 69
<210> 70
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 70
<210> 71
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 71
<210> 72
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 72
<210> 73
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 73
<210> 74
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 74
<210> 75
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 75
<210> 76
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 76
<210> 77
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 77
<210> 78
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 78
<210> 79
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 79
<210> 80
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 80
<210> 81
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 81
<210> 82
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 82
<210> 83
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 83
<210> 84
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 84
<210> 85
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 85
<210> 86
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 86
<210> 87
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 87
<210> 88
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 88
<210> 89
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 89
<210> 90
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 90
<210> 91
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 91
<210> 92
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 92
<210> 93
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 93
<210> 94
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 94
<210> 95
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 95
<210> 96
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 96
<210> 97
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 97
<210> 98
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 98
<210> 99
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 99
<210> 100
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 100
<210> 101
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 101
<210> 102
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 102
<210> 103
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 103
<210> 104
<211> 18
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 104
<210> 105
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 105
<210> 106
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 106
<210> 107
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 107
<210> 108
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 108
<210> 109
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 109
<210> 110
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 110
<210> 111
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 111
<210> 112
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 112
<210> 113
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 113
<210> 114
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 114
<210> 115
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 115
<210> 116
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 116
<210> 117
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 117
<210> 118
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 118
<210> 119
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 119
<210> 120
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 120
<210> 121
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 121
<210> 122
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 122
<210> 123
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 123
<210> 124
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 124
<210> 125
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 125
<210> 126
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 126
<210> 127
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 127
<210> 128
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 128
<210> 129
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 129
<210> 130
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 130
<210> 131
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 131
<210> 132
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 132
<210> 133
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 133
<210> 134
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 134
<210> 135
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 135
<210> 136
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 136
<210> 137
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 137
<210> 138
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 138
<210> 139
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 139
<210> 140
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 140
<210> 141
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 141
<210> 142
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 142
<210> 143
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 143
<210> 144
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 144
<210> 145
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 145
<210> 146
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 146
<210> 147
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 147
<210> 148
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 148
<210> 149
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 149
<210> 150
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 150
<210> 151
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 151
<210> 152
<211> 19
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 152
<210> 153
<211> 20
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 肽
<223> 信號肽
<400> 153
<210> 154
<211> 468
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> 帕妥珠單抗-1含信號肽的抗體重鏈
<400> 154
<210> 155
<211> 234
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> 帕妥珠單抗-1含信號肽的抗體輕鏈
<400> 155
<210> 156
<211> 233
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> 帕妥珠單抗-2含信號肽的抗體重鏈
<400> 156
<210> 157
<211> 467
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> 帕妥珠單抗-3含信號肽的抗體重鏈
<400> 157
<210> 158
<211> 234
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> 帕妥珠單抗-3含信號肽的抗體輕鏈
<400> 158
<210> 159
<211> 232
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> 帕妥珠單抗-4含信號肽的抗體輕鏈
<400> 159
<210> 160
<211> 469
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> 帕妥珠單抗-5含信號肽的抗體重鏈
<400> 160
<210> 161
<211> 467
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> h1902-5-1含信號肽的抗體重鏈
<400> 161
<210> 162
<211> 239
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> h1902-5-1含信號肽的抗體輕鏈
<400> 162
<210> 163
<211> 466
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> h1902-5-2含信號肽的抗體重鏈
<400> 163
<210> 164
<211> 240
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> h1902-5-2含信號肽的抗體輕鏈
<400> 164
<210> 165
<211> 468
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> h1902-5-3含信號肽的抗體重鏈
<400> 165
<210> 166
<211> 238
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> h1902-5-3含信號肽的抗體輕鏈
<400> 166
<210> 167
<211> 449
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> 抗FcRn抗體重鏈
<400> 167
<210> 168
<211> 218
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> 抗FcRn抗體輕鏈
<400> 168
<210> 169
<211> 468
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> FcRn-1含信號肽的抗體重鏈胺基酸序列
<400> 169
<210> 170
<211> 237
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> FcRn-1含信號肽的抗體輕鏈胺基酸序列
<400> 170
<210> 171
<211> 467
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> FcRn-2含信號肽的抗體重鏈胺基酸序列
<400> 171
<210> 172
<211> 236
<212> PRT
<213> 人工序列(Artificial Sequence)
<220>
<221> 鏈
<223> FcRn-2含信號肽的抗體輕鏈胺基酸序列
<400> 172
Claims (15)
- 一種降低抗體的重鏈和/或抗體的輕鏈的N末端異質性的方法,其包括培養宿主細胞,其中該宿主細胞包含(1)第一多核苷酸,其編碼抗體的重鏈及與該重鏈的N端有效連接的第一信號肽;其中,該第一信號肽包含SEQ ID NO:55或SEQ ID NO:56的胺基酸序列;和/或(2)第二多核苷酸,其編碼抗體的輕鏈及與該輕鏈的N端有效連接的第二信號肽;其中,該第二信號肽包含SEQ ID NO:55或SEQ ID NO:56的胺基酸序列;表達該抗體的重鏈和/或抗體的輕鏈。
- 如請求項1所述的方法,其中,表達得到的該抗體的重鏈和/或抗體的輕鏈具有低於3%的末端延伸比率;較佳地,表達得到的該抗體的重鏈和/或抗體的輕鏈具有低於1%的末端延伸比率。
- 如請求項1或2所述的方法,其中該第一信號肽或該第二信號肽各自獨立的包含SEQ ID NO:57、SEQ ID NO:58、SEQ ID NO:59、SEQ ID NO:93、SEQ ID NO:94、SEQ ID NO:95、SEQ ID NO:99、SEQ ID NO:100、SEQ ID NO:101、SEQ ID NO:105、SEQ ID NO:106、SEQ ID NO:107、SEQ ID NO:140、SEQ ID NO:141、SEQ ID NO:142、SEQ ID NO:146、SEQ ID NO:147或SEQ ID NO:148的胺基酸序列;較佳地,該第一信號肽包含SEQ ID NO:57或SEQ ID NO:105的胺基酸序列,和/或該第二信號肽包含SEQ ID NO:57或SEQ ID NO:105的胺基酸序列。
- 如請求項1至3中任一項所述的方法,其中該抗體是鼠源抗體、嵌合抗體、人源化抗體、人抗體、親和力成熟抗體或多特異性抗體。
- 如請求項1至4中任一項所述的方法,其中該抗體選自抗TLR7抗體、抗HER2(ErbB2)抗體、抗Claudin18.2抗體、抗EGFR抗體、抗B7H3抗體、抗c-Met抗體、抗HER3(ErbB3)抗體、抗HER4(ErbB4)抗體、抗CD3抗體、抗CD20抗體、抗CD22抗體、抗CD30抗體、抗CD33抗體、抗CD38抗體、抗CD44抗體、抗CD47抗體、抗CD56抗體、抗CD70抗體、抗CD73抗體、抗CD105抗體、抗CEA抗體、抗A33抗體、抗Cripto抗體、抗SOST抗體、抗EphA2抗體、抗G250抗體、抗MUCl抗體、抗Lewis Y抗體、抗VEGFR抗體、抗GPNMB抗體、抗凝血酶抗體、抗A β抗體、抗Integrin抗體、抗ANGPTL3抗體、抗PSMA抗體、抗PD-1抗體、抗PD-L1抗體、抗LAG3抗體、抗IL-5抗體、抗IL-15抗體、抗IL-4R抗體、抗IL-6R抗體、抗TIGHT抗體、抗Tenascin-C抗體、抗SLC44A4抗體、抗PCSK9抗體、抗EpCAM抗體、抗CTGF抗體、抗TSLP抗體、抗CEA抗體、抗Mesothelin抗體和抗FcRn抗體;較佳地,該抗體選自曲妥珠單抗(Trastuzumab)、帕妥珠單抗(Pertuzumab)、尼妥珠單抗(Nimotuzumab)、恩諾妥珠單抗(Enoblituzumab)、依米妥珠單抗(Emibetuzumab)、因妥珠單抗(Inotuzumab)、匹那妥珠單抗(Pinatuzumab)、本妥昔單抗(Brentuximab)、吉妥珠單抗(Gemtuzumab)、必法妥珠單抗(Bivatuzumab)、洛法妥珠單抗(Lorvotuzumab)、cBR96、格來木單抗(Glematumamab)、抗Claudin18.2抗體和抗FcRn抗體,其中該抗Claudin18.2抗體的重鏈包含SEQ ID NO:49的胺基酸序列、輕鏈包含SEQ ID NO:47的胺基酸序列;該抗FcRn抗體的重鏈包含SEQ ID NO:167的胺基酸序列,輕鏈包含SEQ ID NO:168的胺基酸序列。
- 一種多肽,其包含信號肽,該信號肽包含SEQ ID NO:55或SEQ ID NO:56的胺基酸序列。
- 如請求項6所述的多肽,其中,該多肽還包含與該信號肽有效連接的異源多肽;較佳地,該異源多肽是抗體的重鏈或抗體的輕鏈;更佳地,該信號肽與抗體的重鏈或抗體的輕鏈的N端有效連接。
- 如請求項6或7所述的多肽,其中該信號肽包含SEQ ID NO:57、SEQ ID NO:58、SEQ ID NO:59、SEQ ID NO:93、SEQ ID NO:94、SEQ ID NO:95、SEQ ID NO:99、SEQ ID NO:100、SEQ ID NO:101、SEQ ID NO:105、SEQ ID NO:106、SEQ ID NO:107、SEQ ID NO:140、SEQ ID NO:141、SEQ ID NO:142、SEQ ID NO:146、SEQ ID NO:147或SEQ ID NO:148的胺基酸序列;較佳地,該信號肽包含SEQ ID NO:57或SEQ ID NO:105的胺基酸序列。
- 如請求項6至8中任一項所述的多肽,其中該多肽包含選自由SEQ ID NO:157、SEQ ID NO:158、SEQ ID NO:159、SEQ ID NO:160、SEQ ID NO:163、SEQ ID NO:164、SEQ ID NO:165、SEQ ID NO:166、SEQ ID NO:171和SEQ ID NO:172組成的組的胺基酸序列。
- 一種核酸分子,其編碼如請求項6至9中任一項所述的多肽。
- 一種宿主細胞,其包含如請求項10所述的核酸分子。
- 如請求項11所述的宿主細胞,其中,該宿主細胞是真核宿主細胞;較佳地,該真核宿主細胞是CHO細胞或酵母。
- 一種組成物,其含有抗Claudin18.2抗體,該抗Claudin18.2抗體的重鏈包含SEQ ID NO:49的胺基酸序列,輕鏈包含SEQ ID NO:47的胺基酸序列;該組成物中的抗Claudin18.2抗體存在末端異質性,並且該抗Claudin18.2抗體的重鏈和/或輕鏈具有低於3%的末端延伸比率;較佳地,該抗Claudin18.2抗體的重鏈具有低於1%的末端延伸比率。
- 一種組成物,其含有抗FcRn抗體,該抗FcRn抗體的重鏈包含SEQ ID NO:167的胺基酸序列,輕鏈包含SEQ ID NO:168的胺基酸序列;該組成物中的抗FcRn抗體存在末端異質性,並且該抗FcRn抗體的重鏈和/或輕鏈具有低於3%的末端延伸比率;較佳地,該抗FcRn抗體的重鏈具有低於1%的末端延伸比率。
- 如請求項13或14所述的組成物,其是由如請求項1至3中任一項所述的方法製備得到的。
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IL140110A0 (en) * | 2000-12-05 | 2002-02-10 | Applied Research Systems | Improvement of homogeneity and secretion of recombinant proteins in mammalian systems |
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