TW202218660A - Sarm1酶活性抑制劑及其在神經退行性疾病中的應用 - Google Patents
Sarm1酶活性抑制劑及其在神經退行性疾病中的應用 Download PDFInfo
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- TW202218660A TW202218660A TW110142303A TW110142303A TW202218660A TW 202218660 A TW202218660 A TW 202218660A TW 110142303 A TW110142303 A TW 110142303A TW 110142303 A TW110142303 A TW 110142303A TW 202218660 A TW202218660 A TW 202218660A
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- Prior art keywords
- alkyl
- aryl
- heteroaryl
- sarm1
- compound
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- A61K31/167—Amides, e.g. hydroxamic acids having aromatic rings, e.g. colchicine, atenolol, progabide having the nitrogen of a carboxamide group directly attached to the aromatic ring, e.g. lidocaine, paracetamol
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- A61K31/403—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having five-membered rings with one nitrogen as the only ring hetero atom, e.g. sulpiride, succinimide, tolmetin, buflomedil condensed with carbocyclic rings, e.g. carbazole
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Abstract
本公開提供了SARM1酶活性抑制劑在治療神經退行性疾病或神經性疾病或病症中的應用,本發明特別提供了作為SARM1酶活性抑制劑的式(a)化合物及其藥物組合物。
Description
本申請涉及可用於抑制SARM1酶活性的化合物, 和/或這些化合物在治療和/或預防與SARM1酶活性相關的神經退行性或神經性疾病或病症中的應用。
神經退行性疾病是一類可以嚴重危害人類的疾病,其可以造成破壞性傷害,如神經細胞死亡的漸進性疾病。作為首要的神經變性疾病,已經知道的有阿爾茨海默病(Alzheimer’s disease)、帕金森病(Parkinson’s disease)、肌萎縮性脊髓側索硬化(ALS)、亨廷頓病(Hantington’s disease)等中樞神經疾病和如糖尿病等週邊性神經疾病。其中大多數與衰老有關,實際上這些疾病的發作隨著年齡的增加而增加,然而也存在發作于中年人甚至更年輕者身上的情況。
作為大腦結構和功能的研究結果,神經遞質和神經營養因數的作用已逐步地闡明,但是有關神經變性的很多局部原因還不清楚。僅對帕金森病,闡明瞭該疾病與特殊的神經遞質即多巴胺之間的關係,已用多巴胺的前體L-多巴作為減輕神經症狀和恢復神經功能的藥物。但是,L-多巴不能抑制神經變性的發展,而且隨著病情的發展逐漸地喪失其作用,即多巴胺基的神經細胞變性和缺損。同樣,阿爾茨海默病也是多種神經細胞如乙醯膽鹼基神經細胞、一元胺基神經細胞等的變性和缺損引起的,作為治療這種疾病的藥物,膽鹼酯酶抑制劑已投放市場或正在開發。不過,治療帕金森病的L-多巴仍限於症候治療,以暫時改善神經症狀。
因此,至今對於神經退行性疾病而言,尤其缺乏有效的治療藥物。
研究發現,神經軸突損傷出現於多種神經退行性疾病、意外損傷等神經系統疾病中。軸突退化可引起周圍神經系統結構壞死與功能紊亂,最終導致獲得性或遺傳性中樞神經系統退行性病變。
儘管目前還沒有一套非常有效的藥理學方法能夠精確評估軸突退化所導致的發病率的權重,但是已經在組織病理學研究中發現,在阿爾茲海默病(Alzheimer’s disease)、帕金森病(Parkinson’s disease)、多發性硬化症(multiple sclerosis)、肌萎縮性硬化症(amyotrophic lateral sclerosis)、外周神經病變(peripheral neuropathy)等多種神經病變早期觀察到顯著的軸突損傷降解,表明軸突退化在神經病變發生發展中有重要作用(Fischer等,Neuro-degenerative Diseases, 2007年,4:431-442)。因此,通過減弱甚至阻斷軸突退化,維持神經元結構和功能的完整可能是使多種神經系統疾病受益的治療方案。
在缺乏針對神經退行性疾病的有效治療藥物的情況下,現有技術迫切需要研究開發新的化合物,尤其是化學小分子,包括對神經軸突變性有作用的化合物。
本發明人經過長期研究,意外發現一類具有顯著的SARM1酶活性抑制作用的化合物,並且發現所述化合物可改善軸突變性,並用於治療或預防神經退行性疾病及其相關病症。
SARM1由三個結構域組成,分別是氮端的ARM(Armadillo/HEAT repeat) 結構域、兩個串聯的SAM(Sterile alpha motif) 結構域、和碳端TIR(Toll/Interleukin Receptor)結構域,此外在氮端還有一段線粒體定位信號肽。
已經知道,在野生型神經元中,軸突損傷誘導NAD
+耗竭和軸突變性;敲除SARM1抑制軸突變性,且NAD
+維持在正常水準,表明SARM1促進NAD
+的消耗,加劇了軸突變性。
美國華盛頓大學醫學院的Milbrandt課題組製備了SARM1的TIR結構域(SARM1-TIR)並發現它具有NAD
+水解酶活性。進一步通過嚴格的大腸桿菌表達純化實驗和無細胞表達系統獲得高純度的SARM1-TIR,最終證明SARM1-TIR能夠催化NAD
+產生腺苷二磷酸核糖(Adenosine 5’-diphosphate ribose,ADPR)和環腺苷二磷酸核糖(Cyclic adenosine 5’-diphosphate ribose,cADPR)。
SARM1是一個多功能信號酶,能夠催化多種底物NAD
+、NADP
+和NA等生成信號分子cADPR、ADPR和NAADP等。在多種神經退行性疾病中,SARM1被啟動,導致NAD
+耗竭,進而啟動一個全新的細胞死亡機制;敲除SARM1能夠抑制軸突變性和疾病進程,因此被認為是相關神經疾病的潛在藥物靶點,包括TBI、AD、CIPN、ASL等。
本公開中,發明人製備了全長SARM1,用於NAD酶活性實驗,並用來篩選和獲得了本發明的具有酶活性抑制能力的化合物分子。
因此,基於上述發現,在第一方面,本發明提供了SARM1酶活性抑制劑在製備用於治療或預防神經退行性疾病或神經性疾病或病症中的應用。
在另一方面,本發明提供了SARM1酶活性抑制劑在製備用於治療或預防軸突變性相關疾病或病症中的應用。
其中,
X選自 -NR
a-、-N- 和 -S-,
M選自 -NR
aR
b、-NR
a、氧基(=O)、-OR
b和-SR
b,
Y選自-NR
a-、-N=、=CH- 和 =CR
c-,
Z選自-NR
aR
b、-NR
a、氧基(=O)和-OR
b,
其中所述R
a、R
b各自獨立地選自氫、C
1-C
10烷基、C
3-C
8環烷基、C
6-C
10芳基、C
6-C
10芳基C
1-C
3烷基、C
6-C
10雜芳基、C
6-C
10雜芳基C
1-C
3烷基、C
1-C
3烷氧基、C
1-C
3烷基氨基、C
1-C
3烷基硫基、C
1-C
3烷基磺醯基、C
1-C
3烷基醯基、C
1-C
3烷基氨基醯基和C
1-C
3烷基氨基磺醯基;其中所述C
1-C
10烷基、C
3-C
8環烷基、C
6-C
10芳基、C
6-C
10芳基氨基、C
6-C
10芳基C
1-C
3烷基、C
6-C
10雜芳基、C
6-C
10雜芳基C
1-C
3烷基、C
1-C
3烷氧基、C
1-C
3烷基氨基、C
1-C
3烷基硫基、C
1-C
3烷基磺醯基、C
1-C
3烷基醯基、C
1-C
3烷基氨基醯基和C
1-C
3烷基氨基磺醯基任選地被1個、2個或3個選自以下的取代基所取代:選自氟、氯、溴和碘的鹵素,硝基、氰基、C
1-C
3烷基、C
1-C
3烷氧基、鹵代C
1-C
3烷基、鹵代C
1-C
3烷基硫基、C
3-C
8環烷基C
1-C
3烷基;
其中所述R
c獨立地選自氫、-CN、-CO
2NHR
a、-CO
2R
a、-NO
2、-CF
3和R
a。
其中,R
1和R
3獨立地選自:氫、C
1-C
10烷基、C
3-C
8環烷基、C
6-C
10芳基、C
6-C
10芳基C
1-C
3烷基、C
6-C
10雜芳基、C
6-C
10雜芳基C
1-C
3烷基、C
1-C
3烷氧基、C
1-C
3烷基氨基、C
1-C
3烷基硫基、C
1-C
3烷基磺醯基、C
1-C
3烷基醯基、C
1-C
3烷基氨基醯基和C
1-C
3烷基氨基磺醯基;其中所述C
1-C
10烷基、C
3-C
8環烷基、C
6-C
10芳基、C
6-C
10芳基氨基、C
6-C
10芳基C
1-C
3烷基、C
6-C
10雜芳基、C
6-C
10雜芳基C
1-C
3烷基、C
1-C
3烷氧基、C
1-C
3烷基氨基、C
1-C
3烷基硫基、C
1-C
3烷基磺醯基、C
1-C
3烷基醯基、C
1-C
3烷基氨基醯基和C
1-C
3烷基氨基磺醯基任選地被1個、2個或3個選自以下的取代基所取代:選自氟、氯、溴和碘的鹵素,硝基、氰基、C
1-C
3烷基、C
1-C
3烷氧基、鹵代C
1-C
3烷基、鹵代C
1-C
3烷基硫基、C
3-C
8環烷基C
1-C
3烷基。
其中,
式II-a中M選自 -NR
aR
b,式II-b中M選自氧、硫和-NR
a;
Z選自-NR
aR
b和-OR
b;
R
1’獨立地選自R
a;R
3’獨立地選自氫、-CN、-CO
2NHR
a、-CO
2R
a、 -NO
2、-CF
3和R
a;
其中所述R
a、R
b如前述所定義;
或者,R
3’和Z可以連接形成一個五至七元環。
其中R
5和R
6獨立地選自:氫、C
1-C
10烷基、C
3-C
8環烷基、C
6-C
10芳基、C
6-C
10芳基C
1-C
3烷基、C
6-C
10雜芳基、C
6-C
10雜芳基C
1-C
3烷基、C
1-C
3烷氧基、C
1-C
3烷基氨基、C
1-C
3烷基硫基、C
1-C
3烷基磺醯基、C
1-C
3烷基醯基、C
1-C
3烷基氨基醯基和C
1-C
3烷基氨基磺醯基;其中所述C
1-C
10烷基、C
3-C
8環烷基、C
6-C
10芳基、C
6-C
10芳基氨基、C
6-C
10芳基C
1-C
3烷基、C
6-C
10雜芳基、C
6-C
10雜芳基C
1-C
3烷基、C
1-C
3烷氧基、C
1-C
3烷基氨基、C
1-C
3烷基硫基、C
1-C
3烷基磺醯基、C
1-C
3烷基醯基、C
1-C
3烷基氨基醯基和C
1-C
3烷基氨基磺醯基任選地被1個、2個或3個選自以下的取代基所取代:選自氟、氯、溴和碘的鹵素,硝基、氰基、C
1-C
3烷基、C
1-C
3烷氧基、鹵代C
1-C
3烷基、鹵代C
1-C
3烷基硫基、C
3-C
8環烷基C
1-C
3烷基。
在本發明的式(a)化合物中,優選地,R
a、R
b獨立地選自:C
1-C
3烷基;苯基、苄基和萘基,其中所述苯基、苄基和萘基任選地被甲基、異丙基、三氟甲基、氟、氯或硝基所取代;環丙基甲基;氰基;羥基。
在本發明的式I、式II-a、式II-b和式III化合物中,優選地,R
1、R
3、R
1’、R
3’、R
5和R
6各自獨立地選自:C
1-C
3烷基;苯基、苄基和萘基,其中所述苯基、苄基和萘基任選地被甲基、異丙基、三氟甲基、氟、氯或硝基所取代;環丙基甲基;氰基;羥基。
在一些更優選的實施方案中,式I化合物中的R
1、R
3各自獨立地選自:甲基、苄基、苯基、萘基、對甲基苯基、對氟苯基、異丙基苯基、三氟甲硫基苯基、硝基、甲基或氯取代的苯基、環丙基甲基、三氟甲基取代的苯基。
其中,
W選自-CH
2-、-C(O) -、-O-、-S-和-NR
5-,
R
5選自氫、C
1-C
10烷基、C
3-C
8環烷基、C
6-C
10芳基、C
6-C
10芳基C
1-C
3烷基、C
6-C
10雜芳基、C
6-C
10雜芳基C
1-C
3烷基、C
1-C
3烷氧基、C
1-C
3烷基氨基、C
1-C
3烷基硫基、C
1-C
3烷基磺醯基、C
1-C
3烷基醯基、C
1-C
3烷基氨基醯基和C
1-C
3烷基氨基磺醯基;其中所述C
1-C
10烷基、C
3-C
8環烷基、C
6-C
10芳基、C
6-C
10芳基氨基、C
6-C
10芳基C
1-C
3烷基、C
6-C
10雜芳基、C
6-C
10雜芳基C
1-C
3烷基、C
1-C
3烷氧基、C
1-C
3烷基氨基、C
1-C
3烷基硫基、C
1-C
3烷基磺醯基、C
1-C
3烷基醯基、C
1-C
3烷基氨基醯基和C
1-C
3烷基氨基磺醯基任選地被1個、2個或3個選自以下的取代基所取代:選自氟、氯、溴和碘的鹵素,硝基、氰基、C
1-C
3烷基、C
1-C
3烷氧基、鹵代C
1-C
3烷基、鹵代C
1-C
3烷基硫基、C
3-C
8環烷基C
1-C
3烷基;
R
7和R
8獨立地選自羥基、氯、溴、C
1-C
10烷基和C
1-C
3烷氧基;
m和n獨立地選自0、1、2和3。
其中,
L選自C
1-C
6烷基、C
6-C
10芳基和C
6-C
10雜芳基,所述C
1-C
6烷基、C
6-C
10芳基和C
6-C
10雜芳基任選地被1個或2個選自以下的取代基所取代:選自氟、氯、溴的鹵素,C
1-C
3烷基、C
1-C
3烷氧基、C
3-C
8環烷基;
A選自氨基磺醯基、氨基醯基和C
1-C
5烷基氨基;
R
9選自C
6-C
10芳基、C
6-C
10雜芳基、C
6-C
10芳基C
1-C
3烷基和C
6-C
10雜芳基C
1-C
3烷基,其中所述C
6-C
10芳基、C
6-C
10雜芳基、C
6-C
10芳基C
1-C
3烷基和C
6-C
10雜芳基C
1-C
3烷基任選地被1個、2個選自以下的取代基所取代:選自氟、氯、溴的鹵素, C
1-C
3烷基、C
1-C
3烷氧基、C
3-C
8環烷基、C
6-C
10芳基氨基、二(C
6-C
10芳基)氨基。
本發明還涉及藥物組合物,其包含本發明上述的作為SARM1酶活性抑制劑的化合物,以及任選地可藥用載體或賦形劑。
本發明還涉及一種治療或預防神經退行性疾病或與之相關的神經性疾病或病症的方法,包括向有此需要的物件給予本發明的作為SARM1酶活性抑制劑的化合物。特別地,本發明一種涉及治療或預防軸突變性相關疾病或病症的方法,包括向有此需要的物件給予本發明的作為SARM1酶活性抑制劑的化合物。更特別地,本發明涉及一種SARM1酶活性抑制方法,包括向有此需要的物件給予本發明的化合物;更特別地,本發明涉及一種抑制軸突退化的方法,包括向有此需要的物件給予本發明的化合物。本發明的化合物或組合物可以有效量給予所需要的物件或患者。
術語
在本發明使用的術語中,“神經退行性疾病”與“神經變性疾病”具有相同的含義;“軸突退化”與“軸突變性”具有相同的含義。本領域技術人員能夠理解,所述術語具有通常理解的含義。
在本文中,當提及具有特定結構式的“化合物”時,一般地還涵蓋其立體異構體、非對映異構體、對映異構體、外消旋混合物和同位素衍生物。
本領域技術人員公知,除了化合物的鹽外,溶劑合物、水合物是化合物的替代性存在形式,它們都可以在一定條件下轉化為所述化合物,因此,當在本文中當提到一種化合物時,一般地還包括它的溶劑合物和水合物。
相似地,在本文中當提到一種化合物時,一般地還包括其前藥、代謝產物和氮氧化物。
本發明所述的可藥用鹽可使用例如以下的無機酸或有機酸而形成:“可藥用鹽”是指這樣的鹽,在合理的醫學判斷範圍內,其適用於接觸人和哺乳動物的組織,而沒有不適當的毒性、刺激性、過敏反應等,稱得上合理的受益/風險比。可以在本發明化合物的最終分離和純化期間原位製備所述鹽,或單獨通過將遊離堿或遊離酸與合適的試劑反應製備所述鹽。例如,遊離堿功能可以與合適的酸反應。此外,當本發明的化合物帶有酸性部分,其合適的可藥用鹽可包括金屬鹽,例如鹼金屬鹽(如鈉鹽或鉀鹽);和鹼土金屬鹽(如鈣鹽或鎂鹽)。可藥用的無毒酸加成鹽的示例是氨基與無機酸(例如,鹽酸、氫溴酸、磷酸、硫酸和高氯酸)或有機酸(例如,醋酸、草酸、馬來酸、酒石酸、檸檬酸、琥珀酸或丙二酸)形成的鹽,或通過使用現有技術中的其他方法如離子交換形成的鹽。其他可藥用鹽包括海藻酸鈉、抗壞血酸鹽、苯磺酸鹽、己二酸鹽、樟腦磺酸鹽、天門冬氨酸鹽、苯甲酸鹽、硫酸氫鹽、硼酸鹽、丁酸鹽、樟腦酸鹽、檸檬酸鹽、十二烷基硫酸鹽、乙磺酸鹽、甲酸鹽、富馬酸鹽、葡庚糖酸鹽、甘油磷酸鹽、葡萄糖酸鹽、庚酸鹽、己酸鹽、氫碘酸鹽、乳糖酸鹽、乳酸鹽、月桂酸鹽、月桂基硫酸鹽、蘋果酸鹽、馬來酸鹽、丙二酸鹽、甲磺酸鹽、2-萘磺酸鹽、煙酸鹽、硝酸鹽、油酸鹽、草酸鹽、棕櫚酸鹽、撲酸鹽、果膠酸鹽、過硫酸鹽、3-苯丙酸鹽、磷酸鹽、苦味鹽、新戊酸鹽、丙酸鹽、硬脂酸鹽、琥珀酸鹽、硫酸鹽、酒石酸鹽、硫氰酸鹽、對甲苯磺酸鹽、十一酸鹽、戊酸鹽等。代表性鹼金屬或鹼土金屬鹽包括鈉、鋰、鉀、鈣、鎂等的鹽。其他可藥用鹽包括(適當時)無毒銨鹽、季銨鹽和用反離子形成的胺陽離子,例如,鹵化物、氫氧化物、羧酸鹽、硫酸鹽、磷酸鹽、硝酸鹽、低級烷基磺酸鹽和芳基磺酸鹽。
本發明的可藥用鹽可通過常規方法製備,例如通過將本發明的化合物溶解于與水可混溶的有機溶劑(例如甲醇、乙醇、丙酮和乙腈),向其中添加過量的有機酸或無機酸水溶液,以使得鹽從所得混合物中沉澱,從中除去溶劑和剩餘的遊離酸,然後分離所沉澱的鹽。
本發明所述的“溶劑合物”意指本發明化合物與一個或多個溶劑分子(無論有機的還是無機的)的物理締合。該物理締合包括氫鍵。在某些情形中,例如當一個或多個溶劑分子納入結晶固體的晶格中時,溶劑化物將能夠被分離。溶劑化物中的溶劑分子可按規則排列和/或無序排列存在。溶劑合物可包含化學計量或非化學計量的溶劑分子。“溶劑合物”涵蓋溶液相和可分離的溶劑合物。示例性溶劑合物包括但不限於水合物、乙醇合物、甲醇合物和異丙醇合物。溶劑化方法是本領域公知的。
本發明所述的“立體異構”分為構象異構和構型異構,構型異構還可分為順反異構和旋光異構(即光學異構),構象異構是指具有一定構型的有機物分子由於碳、碳單鍵的旋轉或扭曲而使得分子各原子或原子團在空間產生不同的排列方式的一種立體異構現象,常見的有烷烴和環烷烴類化合物的結構,如環己烷結構中出現的椅式構象和船式構象。“立體異構體”是指當本發明化合物含有一個或多個不對稱中心,因而可作為外消旋體和外消旋混合物、單一對映異構體、非對映異構體混合物和單一非對映異構體。本發明化合物有不對稱中心,每個不對稱中心會產生兩個光學異構體,本發明的範圍包括所有可能的光學異構體和非對映異構體混合物和純的或部分純的化合物。
特別地,本發明所述的化合物可以以互變異構體形式存在,其通過一個或多個雙鍵位移而具有不同的氫的連接點。例如,酮和它的烯醇形式是酮-烯醇互變異構體。各互變異構體及其混合物都包括在本發明的化合物中。所有化合物的對映異構體、非對映異構體、外消旋體、內消旋體、順反異構體、互變異構體、幾何異構體、差向異構體及其混合物等,均包括在本發明範圍中。
本發明的 “同位素衍生物”是指在本專利中化合物被同位素標記的分子。通常用作同位素標記的同位素是:氫同位素,2H和3H;碳同位素:11C, 13C和14C;氯同位素:35Cl和37Cl;氟同位素:18F;碘同位素:123I和125I;氮同位素:13N和15N;氧同位素:15O, 17O 和18O 和硫同位素35S。這些同位素標記化合物可以用來研究藥用分子在組織中的分佈情況。某些重同位素,比如重氫 (2H),的取代能增強代謝的穩定性,延長半衰期從而達到減少劑量的目而提供療效優勢的。同位素標記的化合物一般從已被標記的起始物開始,用已知的合成技術象合成非同位素標記的化合物一樣來完成其合成。
當將本發明化合物可以與另外的SARM1酶活性抑制劑聯用用於治療或預防神經退行性疾病或相關的神經性疾病或病症,或者可以與另外的用於治療或預防神經退行性疾病或相關的神經性疾病或病症的活性藥物聯用,用於治療或預防神經退行性疾病或相關疾病或病症。
本發明的化合物或其可藥用鹽可作為活性成分通過口服或腸胃外施用,其有效量的範圍為在哺乳動物包括人(體重約70kg)的情況下0.1至2000 mg/kg體重/天、優選0.1至100 mg/kg體重/天,並且每天以單次或分次劑量,或者遵循/不遵循預定時間施用。活性成分的劑量可根據多個相關因素(例如待治療物件的情況、疾病類型和嚴重性、施用速率和醫生意見)進行調整。在某些情況下,小於以上劑量的量可能是合適的。
可根據常規方法中的任何一種將本發明藥物組合物配製成用於口服施用或腸胃外施用(包括肌內、靜脈內和皮下途徑、瘤內注射)的劑型,例如片劑、顆粒、粉末、膠囊、糖漿、乳劑、微乳劑、溶液或混懸液。
用於口服施用的本發明藥物組合物可通過將活性成分與例如以下的載體混合來製備:纖維素、矽酸鈣、硬脂酸鎂、硬脂酸鈣、玉米澱粉、乳糖、蔗糖、右旋糖、磷酸鈣、硬脂酸、表面活性劑、助懸劑、明膠、滑石、乳化劑和稀釋劑。在本發明的注射組合物中採用的載體的實例是水、甘油酯、鹽溶液、葡萄糖樣溶液(glucose-like solution)、醇、二醇、葡萄糖溶液、醚(例如,聚乙二醇400)、油、脂肪酸、脂肪酸酯、表面活性劑、助懸劑和乳化劑。
如果無另外說明,使用質譜、核磁、HPLC、蛋白化學、生物化學、重組DNA技術和藥理的常規方法。在本申請中,如果無另外說明,使用“或”或“和”指“和/或”。
在說明書和權利要求書中,給定化學式或名稱應涵蓋所有立體和光學異構體及其中存在上述異構體的外消旋物。除非另外指明,否則所有手性(對映異構體和非對映異構體)和外消旋形式均在本發明範圍內。所述化合物中還可存在C=C雙鍵、C=N雙鍵、環系統等的許多幾何異構體,且所有上述穩定異構體均涵蓋於本發明內。本發明描述了本發明化合物的順式-和反式-(或E-和Z-)幾何異構體,且其可分離成異構體的混合物或分開的異構體形式。
本發明化合物可以光學活性或外消旋形式加以分離。用於製備本發明化合物和其中製備的中間體的所有方法均視為本發明的部分。在製備對映異構體或非對映異構體產物時,其可通過常規方法(例如通過色譜或分段結晶)進行分離。應當理解的是,可存在的所有互變異構體形式均包括在本發明內。本發明的化合物當作為現有技術已知化合物時可以通過商購獲得。
除非另有定義,否則當取代基被標注為“任選取代”時,所述取代基選自例如以下取代基,諸如烷基、環烷基、芳基、雜環基、鹵素、羥基、烷氧基、硝基、氰基、氧代、烷醯基、芳基氧基、烷醯基氧基、氨基、烷基氨基、芳基氨基、烷基硫基等。
本文使用的術語“烷基”或“亞烷基”意欲包括具有指定碳原子數的支鏈和直鏈飽和脂族烴基團。本發明中的烷基優選C
1-C
10烷基、C
1-C
8烷基,更優選C
1-C
6烷基,特別優選C
1-C
4烷基,尤其是C
1-C
3烷基。例如,“C
1-C
6烷基”表示具有1個至6個碳原子的烷基。烷基的實例包括但不限於甲基(Me)、乙基(Et)、丙基(例如正丙基和異丙基)、丁基(例如正丁基、異丁基、叔丁基)和戊基(例如正戊基、異戊基、新戊基)。
術語“烷氧基”或“烷基氧基”是指-O-烷基。例如,“C
1-C
6烷氧基”(或烷基氧基)意欲包括C
1、C
2、C
3、C
4、C
5、C
6烷氧基。優選的烷氧基為C
1-C
10烷氧基、C
1-C
8烷氧基,更優選C
1-C
6烷氧基,特別優選C
1-C
4烷氧基,尤其是C
1-C
3烷氧基。烷氧基的實例包括但不限於甲氧基、乙氧基、丙氧基(例如正丙氧基和異丙氧基)和叔丁氧基。類似地,“烷基硫基”或“硫代烷氧基”表示具有指定數量碳原子的經硫橋連接的如上文所定義的烷基;例如甲基-S-和乙基-S-。同樣,優選的烷基硫基為C
1-C
10烷基硫基、C
1-C
8烷基硫基,更優選C
1-C
6烷基硫基,特別優選C
1-C
4烷基硫基,尤其是C
1-C
3烷基硫基。
術語“羰基”是指由碳和氧兩種原子通過雙鍵連接而成的有機官能團(C=O)。
術語“芳基”,單獨或作為較大部分諸如“芳烷基”、“芳烷氧基”或“芳基氧基烷基”的部分,是指具有總計6至14個環成員的單環、二環或三環的環系統,其中所述系統中的至少一個環為芳族的且其中所述系統中的每個環含有3至7個環成員。在本發明的某些實施方案中,“芳基”是指芳族環系統,其包括但不限於苯基、萘基、聯苯基、茚滿基、1-萘基、2-萘基和四氫萘基。本發明的芳基優選C
6-C
10芳基。術語“芳烷基”或“芳基烷基”是指連接至芳基環的烷基殘基。非限制性實例包括苄基、苯乙基等。
術語“環烷基”是指環狀烷基,其可為單環或二環。本發明的環烷基優選C
3-C
8環烷基,包括但不限於環丙基、環丁基、環戊基、環己基和降莰烷基。
“鹵代”或“鹵素”包括氟、氯、溴和碘。“鹵代烷基”意欲包括具有指定碳原子數且取代有1個或多個鹵素的支鏈和直鏈飽和脂族烴基團。鹵代烷基的實例包括但不限於氟甲基、二氟甲基、三氟甲基、三氯甲基、五氟乙基、五氯乙基、2,2,2-三氟乙基、七氟丙基和七氯丙基。鹵代烷基的實例還包括意欲包括具有指定碳原子數且取代有1個或多個氟原子的支鏈和直鏈飽和脂族烴基團的氟代烷基,特別優選的是三氟甲基。
鹵代烷氧基表示具有指定數量碳原子的經氧橋連接的如上文所定義的鹵代烷基。例如,“C
1-C
6鹵代烷氧基”意欲包括C
1、C
2、C
3、C
4、C
5、C
6鹵代烷氧基。鹵代烷氧基的實例包括但不限於三氟甲氧基、2,2,2-三氟乙氧基和五氟乙氧基。類似地,“鹵代烷基硫基”或“硫代鹵代烷氧基”表示具有指定數量碳原子的經硫橋連接的如上文所定義的鹵代烷基;例如三氟甲基-S-和五氟乙基-S-。
本公開內容中,一個或更多個鹵素可以各自獨立地選自氟、氯、溴和碘。
術語“雜芳基”意指穩定的3元、4元、5元、6元、或7元芳香單環或7元、8元、9元、10元的芳香二環或芳香多環雜環,其為完全不飽和的、部分不飽和的,且其含有碳原子和1個、2個、3個或4個獨立地選自N、O和S的雜原子。氮和硫雜原子可任選地被氧化。氮原子為取代的或未取代的(即N或NR,其中R為H或如果被定義,則為另一取代基)。雜環可在得到穩定結構的任何雜原子或碳原子處連接至其側基。如果所得化合物是穩定的,則本文所述的雜環基可在碳或氮原子上被取代。雜環中的氮可任選地被季銨化。優選地,當雜環中S和O原子的總數超過1時,則這些雜原子彼此不相鄰。優選地,雜環中S和O原子的總數不大於1。當使用術語“雜環”時,其意欲包括雜芳基。芳雜基的實施例包括但不限於吖啶基、氮雜環丁基、吖辛因基、苯並咪唑基、苯並呋喃基、苯並硫代呋喃基、苯並噻吩基、苯並噁唑基、苯並噁唑啉基、苯並噻唑基、苯並三唑基、苯並四唑基、苯並異噁唑基、苯並異噻唑基、苯並咪唑啉基、哢唑基、4aH-哢唑基、哢啉基、色滿基、色烯基、噌啉基、十氫喹啉基、2H,6H-1,5,2-二噻嗪基、二氫呋喃並[2,3-b]四氫呋喃基、呋喃基、呋咱基、咪唑烷基、咪唑啉基、咪唑基、1H-吲唑基、咪唑並吡啶基、假吲哚基(indolenyl)、二氫吲哚基、吲嗪基、吲哚基、3H-吲哚基、靛紅醯基(isatinoyl)、異苯並呋喃基、異色滿基、異吲唑基、異二氫吲哚基、異吲哚基、異喹啉基、異噻唑基、異噻唑並吡啶基、異噁唑基、異噁唑並吡啶基、亞甲基二氧基苯基、嗎啉基、二氮雜萘基、八氫異喹啉基、噁二唑基、1,2,3-噁二唑基、1,2,4-噁二唑基、1,2,5-噁二唑基、1,3,4-噁二唑基、噁唑烷基、噁唑基、噁唑並吡啶基、噁唑烷基、萘嵌間二氮雜苯基、羥吲哚基、嘧啶基、菲啶基、菲咯啉基、吩嗪基、吩噻嗪基、吩噁噻基、吩噁嗪基、酞嗪基、呱嗪基、呱啶基、呱啶酮基、4-呱啶酮基、胡椒基、喋啶基、嘌呤基、吡喃基、吡嗪基、吡唑烷基、吡唑啉基、吡唑並吡啶基、吡唑基、噠嗪基、吡啶並噁唑基、吡啶並咪唑基、吡啶並噻唑基、吡啶基、嘧啶基、吡咯烷基、吡咯啉基、2-吡咯烷酮基、2H-吡咯基、吡咯基、喹唑啉基、喹啉基、4H-喹嗪基、喹喔啉基、奎寧環基、四唑基、四氫呋喃基、四氫異喹啉基、四氫喹啉基、6H-1,2,5-噻二嗪基、1,2,3-噻二唑基、1,2,4-噻二唑基、1,2,5-噻二唑基、1,3,4-噻二唑基、噻蒽基、噻唑基、噻吩基、噻唑並吡啶基、噻吩並噻唑基、噻吩並噁唑基、噻吩並咪唑基、噻吩基、三嗪基、1,2,3-三唑基、1,2,4-三唑基、1,2,5-三唑基、1,3,4-三唑基和呫噸基、喹啉基、異喹啉基、酞嗪基、喹唑啉基、吲哚基、異吲哚基、二氫吲哚基、1H-吲唑基、苯並咪唑基、1,2,3,4-四氫喹啉基、1,2,3,4-四氫異喹啉基、5,6,7,8-四氫-喹啉基、2,3-二氫-苯並呋喃基、色滿基、1,2,3,4-四氫-喹喔啉基和1,2,3,4-四氫-喹唑啉基。術語“雜芳基”還可以包括由上述所定義的 “芳基”與單環“雜芳基”所形成的聯芳基結構,例如但不限於“-苯基聯吡啶基-”、“-苯基聯嘧啶基”、“-吡啶基聯苯基”、“-吡啶基聯嘧啶基-”、“-嘧啶基聯苯基-”;其中本發明還包括含有例如上述雜環的稠環和螺環化合物。
本文中所用的術語“取代”意指至少一個氫原子被非氫基團替代,條件是維持正常化合價且所述取代得到穩定的化合物。本文所用的環雙鍵為在兩個相鄰環原子之間形成的雙鍵(例如C=C、C=N或N=N)。
當任何變數在化合物的任何組成或式中出現一次以上時,其每次出現時的定義均獨立於其在其它每種情況下出現時的定義。因此,例如如果顯示基團取代有0-3個R,則所述基團可任選地取代有至多三個R基團,且在每次出現時R獨立地選自R的定義。此外,取代基和/或變數的組合僅在上述組合可產生穩定的化合物時才容許存在。
本文使用的術語“有效量”意指將會引起例如研究人員或臨床醫師所尋求的組織、系統、動物或人的生物學或醫學回應的藥物或藥劑(即本發明化合物)的量。此外,術語“治療有效量”意指這樣的量:與未接受上述量的相應受試者相比,所述量導致改善的治療、治癒、預防或減輕疾病、病症或副作用,或降低在疾病或病症的進展速度。有效量可以一個或多個給藥、施用或劑量給予且不意欲被特定的製劑或給藥途徑限制。該術語還包括在其範圍內的增強正常生理機能的有效量。
本文使用的術語“治療”包括導致改善病症、疾病、障礙等的任何效果,例如減輕、減少、調節、改善或消除,或改善其症狀。
術語“藥用”在本文中用於指如下那些化合物、物質、組合物和/或劑型:在合理醫學判斷的範圍內,其適於與人類和動物的組織接觸使用而無過高毒性、刺激性、過敏反應和/或其它問題或併發症,並與合理的益處/風險比相稱。
本文使用的短語“可藥用載體”意指藥用物質、組合物或媒介物,諸如液體或固體填充劑、稀釋劑、賦形劑、製造助劑(例如潤滑劑、滑石、硬脂酸鎂、硬脂酸鈣或硬脂酸鋅或硬脂酸)或溶劑包囊物質,其涉及將主題化合物從一個器官或身體的部分攜帶或運送至另一個器官或身體的部分。每種載體在與製劑的其它成分相容和對患者無害的意義上必須是“可接受的”。
術語“藥物組合物”意指包含本發明化合物與至少一種其它藥用載體的組合物。“藥用載體”是指本領域中通常接受用於將生物活性劑遞送至動物(具體為哺乳動物)的介質,包括(即)佐劑、賦形劑或媒介物,諸如稀釋劑、防腐劑、填充劑、流動調控劑、崩解劑、潤濕劑、乳化劑、懸浮劑、增甜劑、矯味劑、芳香劑、抗細菌劑、抗真菌劑、潤滑劑和分散劑,這取決於給藥模式和劑型的性質。
如本文所用,某一化合物或藥物組合物,給藥後,可以使某一疾病、症狀或情況得到改善,尤指其嚴重度得到改善,延遲發病,減緩病情進展,或減少病情持續時間。無論固定給藥或臨時給藥、持續給藥或斷續給藥,可以歸因於或與給藥有關的情況。
給藥途徑
適合的給藥途徑包括但不限於,口服、靜脈注射、直腸、氣霧劑、非腸道給藥、眼部給藥、肺部給藥、經皮給藥、陰道給藥、耳道給藥、鼻腔給藥及局部給藥。此外,僅作舉例說明,腸道外給藥,包括肌肉注射、皮下注射、靜脈注射、髓內注射、心室注射、腹膜內注射、淋巴管內注射、及鼻內注射。
在一方面,此處描述的化合物給藥方式是局部的而不是全身性的給藥方式。在特定的具體實施例中,長效製劑通過植入給藥(例如皮下或肌肉)或通過肌肉注射。此外,在另一具體化實施例中,藥物通過靶向藥物給藥系統來給藥。例如,由器官特異性抗體包裹的脂質體。在這種具體實施例中,所述脂質體被選擇性的導向特定器官並吸收。
在本發明的藥物組合物中,可以根據本領域技術人員認識範圍內的諸多因素來調配藥用載體。這些因素包括,但不限於:所調配活性劑的類型和性質;含有活性劑的組合物所要給藥的受試者;組合物的預期給藥途徑;及所靶向的治療適應症。藥用載體包括水性和非水性液體介質及各種固體和半固體劑型。
上述載體可包括除活性劑外的諸多不同成分和添加劑,上述其它成分出於本領域技術人員公知的各種原因包括於製劑中,例如穩定活性劑、粘合劑等。關於合適的藥用載體和載體選擇中所涉及的因素的描述可參見多個容易獲得的來源,例如Allen L.V.Jr. et al. Remington: The Science and Practice of Pharmacy (2 Volumes), 22
ndEdition (2012), Pharmaceutical Press。
所述化合物通常以與根據預期給藥形式(例如口服片劑、膠囊劑、酏劑和糖漿劑)適當地選擇且與常規藥學實踐相符合的合適藥物稀釋劑、賦形劑或載體(在本文中統稱為藥物載體)的混合物形式進行給藥。
雖然本發明化合物可單獨給藥,但優選以藥物製劑(組合物)形式給予化合物。
試劑盒/產品包裝
為了用於上述適應症的治療,試劑盒/產品包裝也在此進行描述。這些試劑盒可以由輸送器、藥包或容器盒組成,容器盒可被劃分成多格,以容納一種或多種容器,如管形瓶、試管及類似物等,每個容器中包含所述方法中的單獨一種成分。合適的容器包括瓶子,管形瓶,注射器和試管等。容器由可接受的玻璃或塑膠等材料製作而成。
舉例來講,容器可裝有一種或多種在此所述的化合物,化合物可能以藥物組分形式存在,也可能與在本文中所述的其它成分組成混合物體存在。容器可有一個無菌輸出口(例如容器可為靜脈輸液包或瓶,瓶塞可被皮下注射器針頭刺破)。這樣的試劑盒可帶有一種化合物,及本文中所述的使用方法的說明、標籤或操作說明。
一個典型的試劑盒可包括一種或多種容器,為適應商業推廣和使用者對化合物使用的需求,每個容器裝有一種或多種材料(如試劑,也可以是濃縮的母液,和/或器械)。這些材料包括但不局限於緩衝液,稀釋液,濾器,針頭,注射器,輸送器,包,容器,瓶和/或試管,附有內容清單和/或使用說明書,內置包裝也附有說明書。整套的說明都要包括在內。
本發明提到的上述特徵,或實施例提到的特徵可以任意組合。本案說明書所揭示的所有特徵可與任何組合物形式並用,說明書中所揭示的各個特徵,可以任何可提供相同、均等或相似目的的替代性特徵取代。因此除有特別說明,所揭示的特徵僅為均等或相似特徵的一般性例子。
下面結合具體實施例,進一步闡述本發明。應理解,這些實施例僅用於說明本發明而不用於限制本發明的範圍。下列實施例中未注明具體條件的實驗方法,通常按照常規條件或按照製造廠商所建議的條件。除非另外說明,否則所有的百分數、比率、比例、或份數按重量計。
本發明中的重量體積百分比中的單位是本領域技術人員所熟知的,例如是指在100毫升的溶液中溶質的重量。除非另行定義,文中所使用的所有專業與科學用語與本領域熟練人員所熟悉的意義相同。此外,任何與所記載內容相似或均等的方法及材料皆可應用於本發明方法中。文中所述的較佳實施方法與材料僅作示範之用。
具體實施例
本教導包括實施例中提供的描述,其不旨在限制任何權利要求的範圍。提供以下非限制性實施例以進一步說明本發明。根據本公開,本領域技術人員將理解,在不脫離本教導的精神和範圍的情況下,可以對所公開的具體實施方案進行許多改變並仍然能獲得相同或相似的結果。
用來SARM 1酶活性測試的化合物來自1)篩選用“上市藥物”化合物庫(從TargetMol購買,約2000個化合物),2)單獨採購的化合物,或者3)用下列一般方法合成的化合物(I),(II), 和(III)。
實施例1:式I化合物的合成:
實施例2:式II-a化合物的合成
實施例3:式III化合物的合成
生物活性實施例
實施例4: SARM1的製備及NAD酶活性測試
測試化合物的準備:
測試化合物的儲備液濃度為200μM或10mM(在DMSO中),在體外SARM1酶測定和抑制劑篩選時,進一步稀釋到所需的化合物濃度。
SARM1蛋白的表達純化
(1)質粒構建
本例採用PCR 擴增dN-SARM1 的基因序列,去除SARM1的N端線粒體定位信號肽,將PCR擴增產物構建到pLenti-CMV-puro-dest質粒(addgene catalog #17452)中,具體如下:
在上海生工公司合成BC2T-TEV多肽基因片段、dN-SARM1-F和dN-SARM1-R。其中,BC2T-TEV多肽基因片段為Seq ID No.1所示序列,dN-SARM1-F為Seq ID No.2所示序列,dN-SARM1-R為Seq ID No.3所示序列。
Seq ID No.1:
5’-CTCATGccagacagaaaagcggctgttagtcactggcagcaaGATATCGGCGGAGGCGGATCTGGCGGAGGCGGATCTGGCGGAGGCGGATCTgagaatttgtattttcagggtGGCGGAGGCGGAGGTACCCTG-3’
Seq ID No.2:5’-GGTACCCTGGCGGTGCCTGGGCCAG-3’
Seq ID No.3:5’-GCGGCCGCCTAGGTTGGACCCATGGGTGCAGCACCC-3’
採用HindIII/KpnI酶切位點將合成的BC2T-TEV多肽基因片段連接到pENTR載體上pENTR1A-GFP-N2(addgene: catalog #19364)。用引物dN-SARM1-F和dN-SARM1-R將dN-SARM1基因片段擴增出來,通過KpnI和NotI酶切位點將擴增獲得的dN-SARM1基因片段構建到帶有BC2T-TEV的pENTR載體上。本例的所有核酸內切酶購買於thermo。
PCR擴增獲得的dN-SARM1基因片段為Seq ID No.4所示序列。
Seq ID No.4:
GGTACCCTGGCGGTGCCTGGGCCAGATGGGGGCGGTGGCACGGGCCCATGGTGGGCTGCGGGTGGCCGCGGGCCCCGCGAAGTGTCGCCGGGGGCAGGCACCGAGGTGCAGGACGCCCTGGAGCGCGCGCTGCCGGAGCTGCAGCAGGCCTTGTCCGCGCTGAAGCAGGCGGGCGGCGCGCGGGCCGTGGGCGCCGGCCTGGCCGAGGTCTTCCAACTGGTGGAGGAGGCCTGGCTGCTGCCGGCCGTGGGCCGCGAGGTAGCCCAGGGTCTGTGCGACGCCATCCGCCTCGATGGCGGCCTCGACCTGCTGTTGCGGCTGCTGCAGGCGCCGGAGTTGGAGACGCGTGTGCAGGCCGCGCGCCTGCTGGAGCAGATCCTGGTGGCTGAGAACCGAGACCGCGTGGCGCGCATTGGGCTGGGCGTGATCCTGAACCTGGCGAAGGAACGCGAACCCGTAGAGCTGGCGCGGAGCGTGGCAGGCATCTTGGAGCACATGTTCAAGCATTCGGAGGAGACATGCCAGAGGCTGGTGGCGGCCGGCGGCCTGGACGCGGTGCTGTATTGGTGCCGCCGCACGGACCCCGCGCTGCTGCGCCACTGCGCGCTGGCGCTGGGCAACTGCGCGCTGCACGGGGGCCAGGCGGTGCAGCGACGCATGGTAGAGAAGCGCGCAGCCGAGTGGCTCTTCCCGCTCGCCTTCTCCAAGGAGGACGAGCTGCTTCGGCTGCACGCCTGCCTCGCAGTAGCGGTGTTGGCGACTAACAAGGAGGTGGAGCGCGAGGTGGAGCGCTCGGGCACGCTGGCGCTCGTGGAGCCGCTTGTGGCCTCGCTGGACCCTGGCCGCTTCGCCCGCTGTCTGGTGGACGCCAGCGACACAAGCCAGGGCCGCGGGCCCGACGACCTGCAGCGCCTCGTGCCGTTGCTCGACTCTAACCGCTTGGAGGCGCAGTGCATCGGGGCTTTCTACCTCTGCGCCGAGGCTGCCATCAAGAGCCTGCAAGGCAAGACCAAGGTGTTCAGCGACATCGGCGCCATCCAGAGCCTGAAACGCCTGGTTTCCTACTCTACCAATGGCACTAAGTCGGCGCTGGCCAAGCGCGCGCTGCGCCTGCTGGGCGAGGAGGTGCCACGGCCCATCCTGCCCTCCGTGCCCAGCTGGAAGGAGGCCGAGGTTCAGACGTGGCTGCAGCAGATCGGTTTCTCCAAGTACTGCGAGAGCTTCCGGGAGCAGCAGGTGGATGGCGACCTGCTTCTGCGGCTCACGGAGGAGGAACTCCAGACCGACCTGGGCATGAAATCGGGCATCACCCGCAAGAGGTTCTTTAGGGAGCTCACGGAGCTCAAGACCTTCGCCAACTATTCTACGTGCGACCGCAGCAACCTGGCGGACTGGCTGGGCAGCCTGGACCCGCGCTTCCGCCAGTACACCTACGGCCTGGTCAGCTGCGGCCTGGACCGCTCCCTGCTGCACCGCGTGTCTGAGCAGCAGCTGCTGGAAGACTGCGGCATCCACCTGGGCGTGCACCGCGCCCGCATCCTCACGGCGGCCAGAGAAATGCTACACTCCCCGCTGCCCTGTACTGGTGGCAAACCCAGTGGGGACACTCCAGATGTCTTCATCAGCTACCGCCGGAACTCAGGTTCCCAGCTGGCCAGTCTCCTGAAGGTGCACCTGCAGCTGCATGGCTTCAGTGTCTTCATTGATGTGGAGAAGCTGGAAGCAGGCAAGTTCGAGGACAAACTCATCCAGAGTGTCATGGGTGCCCGCAACTTTGTGTTGGTGCTATCACCTGGAGCACTGGACAAGTGCATGCAAGACCATGACTGCAAGGATTGGGTGCATAAGGAGATTGTGACTGCTTTAAGCTGCGGCAAGAACATTGTGCCCATCATTGATGGCTTCGAGTGGCCTGAGCCCCAGGTCCTGCCTGAGGACATGCAGGCTGTGCTTACTTTCAACGGTATCAAGTGGTCCCACGAATACCAGGAGGCCACCATTGAGAAGATCATCCGCTTCCTGCAGGGCCGCTCCTCCCGGGACTCATCTGCAGGCTCTGACACCAGTTTGGAGGGTGCTGCACCCATGGGTCCAACCTAG
PCR擴增反應體系為:5×PrimeSTAR Buffer(Mg
2+plus)10μL、dNTP Mixture(2.5mM each)4μL、加入終濃度0.2μmol/L的dN-SARM1-F、加入終濃度0.2μmol/L的dN-SARM1-R、DNA範本100ng、PrimeSTAR HS DNA Polymerase(2.5 U/μL)0.5μL,最後補充滅菌ddH
2O至50μL。全長的SARM1由維真生物公司全合成到pUC57質粒中,以pUC57-SARM1作為DNA模版進行PCR。
PCR擴增產物採用瓊脂糖凝膠電泳,然後用Omega膠回收試劑盒D2500-02回收純化,切膠回收具體步驟參考試劑盒說明書。回收純化的PCR擴增產物用於構建到帶有BC2T-TEV的pENTR載體上。
重組質粒的構建體系步驟如下:
酶切反應體系:PCR擴增回收產物或質粒800ng、核酸內切酶(Fastdigest)各1µL、緩衝液1µL,補充滅菌水至體積10µL。酶切反應條件為37℃恒溫30分鐘。
質粒連接:酶切反應結束後,將酶切的PCR擴增回收產物300ng、酶切的質粒50ng,與T4 DNA連接酶1µL、T4 DNA連接酶緩衝液1µL混合均勻,並補充滅菌水至體積20µL。連接條件為16℃恒溫過夜。
連接產物採用瓊脂糖凝膠電泳,然後用Omega膠回收試劑盒D2500-02回收純化,回收純化產物即本例的重組質粒,標記為pENTR1A-BC2T-dN-SARM1。
pENTR1A-BC2T-dN-SARM1質粒構建完成後,通過LR反應將dN-SARM1重組至pLenti-CMV-puro-dest。
重組反應體系:150ng的pENTR1A-BC2T-dN-SARM1、50ng的pLenti-CMV-puro-dest、1µL的5× LR Clonase™ reaction buffer,補充滅菌水至總體積5µL。
(2)轉染
本例通過脂質體lipofectamine 2000(Life Technologies公司)將構建的pLenti-CMV-puro-dest和病毒包裝質粒psPAX2, pMD2.G(addgene psPAX2: #12260, pMD2.G:#12259)共同轉染到HEK293T細胞(ATCC)中,製備帶有dN-SARM1閱讀框的病毒。具體如下:
在3.5cm皿中鋪1×10
6個細胞,第二天轉染。
質粒混合物:1.7µg的pLenti-dN-SARM1、1.7µg的psPAX2、0.6µg的pMD2.G、8µL lipofectamine 2000轉染試劑,根據說明書進行轉染,8小時後換液,收集48小時的病毒。
(3)細胞篩選
採用dN-SARM1病毒感染“(2)轉染”步驟獲得的HEK293T細胞,通過加入嘌呤黴素篩選獲得穩定表達dN-SARM1蛋白的細胞。具體如下:
病毒:80 µL/3.5cm感染2×10
5,感染48小時後,加2µg/mL的嘌呤黴素進行篩選,篩選48小時後,不感染病毒的細胞已完全死亡。感染病毒的細胞大部分存活,再次加入2µg/mL的嘌呤黴素二次篩選48小時。
(4)蛋白質提取
培養並收集“(3)細胞篩選”步驟獲得的穩定表達dN-SARM1蛋白的細胞,通過洋地黃皂甙裂解的方式獲得細胞質中表達的dN-SARM1蛋白,用於體外活性測定實驗。具體如下:
細胞培養用DMEM培養於10 cm皿中,用trypsin-EDTA將細胞消化下來,然後1000 rpm離心5分鐘,加入PBS洗一次,然後用含有100µM 毛地黃皂苷的PBS將細胞重懸,0.6mL PBS/10cm細胞,裂解5分鐘。取細胞加入台盼藍顯微鏡下觀察,90%以上的細胞已經被裂解。將5000 rpm離心10分鐘,收集dN-SARM1蛋白的上清。
實施例5:抑制SARM1酶活性的體外生物化學測試(%抑制率)
採用通過上述實施例4中“SARM1蛋白的表達純化”“(4)蛋白質提取”獲得的dN-SARM1蛋白,對化合物進行PC6螢光法檢測[中國專利202010528147.3]。
反應條件:
首先將0.05 μg/ml dN-SARM1和50 μM的化合物在50 mM Tris-HCl (pH 7.5)溶液中孵育10分鐘,然後50 μM NAD、50 μM PC6 作為底物和50 μM NMN作為啟動劑加入與藥物孵育後的dN-SARM1蛋白中,常溫下反應30分鐘。其中,各組分的濃度為反應體系中的終濃度。
在反應過程中,通過酶標儀檢測PC6螢光波譜動力學,其中檢測激發波長和發射波長分別為390 nm和520 nm。最終採用反應速率表示蛋白的活性,反應速率越高表明蛋白活性越強,化合物的抑制效率越低。
下表1中提供了一些化合物在50 μM對SARM1酶活性的抑制率:
表1
化合物編號 | 酶活性的抑制率 |
7 | 98.6% |
32 | 93.7% |
35 | 102% |
36 | 98.5% |
37 | 101% |
40 | 75.6 |
41 | 67.3% |
42 | 67.4% |
43 | 85.3% |
實施例6:抑制SARM1酶活性的體外生物化學測試(IC
50)
首先將200 μM的化合物加入到含有0.05 μg/ml dN-SARM1的50 mM Tris-HCl (pH 7.5)溶液中,然後取一半加入等體積含有0.05 μg/ml dN-SARM1的50 mM Tris-HCl (pH 7.5)溶液混合,以此類推將藥物稀釋6次,終濃度分別為200、100、50、25、12.5、6.25、3.125 μM,或200、50、12.5、 3.125、0.78、0.195、0.049 μM,不加入抑制劑的為對照組,在室溫孵育10分鐘。
然後50 μM NAD、50 μM PC6 作為底物和50 μM NMN作為啟動劑加入與抑制劑的孵育後的dN-SARM1蛋白中,常溫下反應30分鐘。其中,各組分的濃度為反應體系中的終濃度。
在反應過程中,通過酶標儀檢測PC6螢光波譜動力學,其中檢測激發波長和發射波長分別為390 nm和520 nm。最終採用反應速率表示蛋白的活性並計算半數抑制濃度,反應速率越高表明蛋白活性越強,化合物的抑制效率越低。
化合物抑制SARM1酶活性的劑量曲線採用上述方法。
在下表2中提供了這些化合物在測定中的IC
50區間:
抑制SARM1酶活性的IC
50區間:A<1.0 μM; B: 1-10μM;C:>10μM
表2
化合物編號 | IC 50(PC6) |
1 | A |
2 | A |
3 | A |
4 | A |
5 | A |
6 | A |
7 | A |
8 | B |
11 | B |
12 | C |
13 | B |
14 | C |
15 | A |
17 | C |
18 | C |
24 | A |
32 | C |
35 | C |
36 | C |
37 | A |
39 | B |
43 | C |
實施例7:在誘導型過表達SARM1的細胞系中檢測藥物的抑制活性
(1)iSARM1細胞系製備
本例採用PCR 擴增SARM1的基因序列,構建到pInducer20-neo質粒中。利用脂質體包裝pInducer20-SARM1病毒,感染HEK293,獲得誘導型的SARM1過表達的細胞系,標記為iSARM1(HEK293)。具體製備如下:
本例採用Seq ID No.5和Seq ID No.6所示序列的引物,進行PCR擴增SARM1基因序列,PCR擴增產物回收、酶切、重組質粒構建、轉染和細胞篩選都與“一、SARM1蛋白的表達純化”中的dN-SARM1一致,唯一區別的是,在進行“(3)細胞篩選”時,採用2mg/mL 新黴素替換“2µg/mL嘌呤黴素”,其餘都相同,在此不累述。
Seq ID No.5:5’-TCTAGAGCCACCATGGTCCTGACGCTGCTTC-3’
Seq ID No.6:5’-GAATTCTTAGGTTGGACCCATGGGTG-3’
(2)檢測抑制劑對細胞系中SARM1蛋白的活性抑制
首先用0.05 mg/ml 多聚賴氨酸處理96孔培養皿5分鐘,用PBS清洗一次。將3×104的iSARM1(HEK293)鋪板到96孔板中,在37℃和5%的培養箱中培養過夜。第二天,加入終濃度50µM的抑制劑到細胞中,在培養箱中孵育1.5小時;然後,加入終濃度100µM的啟動劑CZ-48,在共同孵育16小時,同時設置不加CZ-48或不加藥物的對照組。最後檢測細胞內cADPR水準來表示SARM1的活性,計算出50µM抑制劑在細胞中對SARM1的抑制率。
cADPR測定方法具體如下:首先用PBS 將細胞清洗一次,加入150 μl 預冷的0.6M高氯酸(PCA)將細胞快速裂解並沉澱蛋白。將PCA上清轉移至1.5 ml 的離心管中,培養基中的蛋白用100 μl 1M NaOH 重新溶解。上清加入0.5 ml有機試劑混合液(三辛胺:氯仿= 1:3),將PCA 從水中萃取出來。充分震盪後,12000 rpm離心10 分鐘,溶液分為3 層:上層水相,包含目的小分子;下層有機相,PCA 溶於其中;而上下兩層之間為薄薄的一層蛋白層,取上層轉移至新的離心管中。按1:100 的比例向溶液中加1M Tris-Mg(1M Tris(pH 8.0):1M MgCl2=9:1),按1:250 的比例加入NADase,在37 ℃處理過夜,去除混合液中的NAD+。處理完成後,用Millipore 的10 K 96 孔濾膜板過濾除去NADase。
通過Cycling 分析法測定溶液中cADPR 的含量,具體操作如下,取20 μl 待測樣品或cADPR 標準品加入96 孔不透明白板中。製備反應液:9.6 ml PBS(pH 7.4),200 μl ethanol,150 μl 1 mg/ml AD,10 μl 10 mM FMN,5 μl 18 mg/ml Diaphorase,10 μl 10 mM Resazurin,100 μl 1M Nam。分出一半反應液加入0.2 μg/ml cyclase,不加入cyclase 的反應液為對照實驗。每個樣品分為兩組,每組3 個重複,分別加入含有或不含有cyclase 的反應液開始反應,記錄30 分鐘內的反應動力學曲線(Ex:Em =544/599)。計算反應平均斜率,並且通過cADPR 標準品換算得到準確的cADPR 含量。
抑制率的計算方法:(1 - 抑制劑組cADPR含量/對照組cADPR含量)*100%
使用上述方法,在誘導型過表達SARM1的細胞系中的藥物抑制率見下表3:細胞活性抑制率區間:A>50%; B: 25-50%;C:<25%
表3
化合物編號 | 抑制率 |
2 | B |
11 | A |
24 | A |
Claims (17)
- 一種SARM1酶活性抑制劑在製備用於治療或預防神經退行性疾病或神經性疾病或病症中的應用。
- 一種SARM1酶活性抑制劑在製備用於治療或預防軸突變性相關疾病或病症中的應用。
- 3. 根據請求項1或2的應用,其中所述神經退行性疾病或神經性疾病或病症或軸突變性相關疾病或病症選自阿爾茲海默病(Alzheimer’s disease)、帕金森病(Parkinson’s disease)、多發性硬化症(multiple sclerosis)、肌萎縮性硬化症(amyotrophic lateral sclerosis)、外周神經病變 (peripheral neuropathy)。
- 根據請求項1至3中任一項的應用,其中所述SARM1酶活性抑制劑為式(a)化合物、其藥學上可接受的鹽或其前藥: (a) 其中, X選自 -NR a-、-N- 和 -S-, M選自 -NR aR b、-NR a、氧基(=O)、-OR b和-SR b, Y選自-NR a-、-N=、=CH-和=CR c-, Z選自-NR aR b、-NR a、氧基(=O)和-OR b, 其中所述R a、R b各自獨立地選自氫、C 1-C 10烷基、C 3-C 8環烷基、C 6-C 10芳基、C 6-C 10芳基C 1-C 3烷基、C 6-C 10雜芳基、C 6-C 10雜芳基C 1-C 3烷基、C 1-C 3烷氧基、C 1-C 3烷基氨基、C 1-C 3烷基硫基、C 1-C 3烷基磺醯基、C 1-C 3烷基醯基、C 1-C 3烷基氨基醯基和C 1-C 3烷基氨基磺醯基;其中所述C 1-C 10烷基、C 3-C 8環烷基、C 6-C 10芳基、C 6-C 10芳基氨基、C 6-C 10芳基C 1-C 3烷基、C 6-C 10雜芳基、C 6-C 10雜芳基C 1-C 3烷基、C 1-C 3烷氧基、C 1-C 3烷基氨基、C 1-C 3烷基硫基、C 1-C 3烷基磺醯基、C 1-C 3烷基醯基、C 1-C 3烷基氨基醯基和C 1-C 3烷基氨基磺醯基任選地被1個、2個或3個選自以下的取代基所取代:選自氟、氯、溴和碘的鹵素,硝基、氰基、C 1-C 3烷基、C 1-C 3烷氧基、鹵代C 1-C 3烷基、鹵代C 1-C 3烷基硫基、C 3-C 8環烷基C 1-C 3烷基。 其中所述R c獨立地選自氫、-CN、-CO 2NHR a、-CO 2R a、-NO 2、-CF 3和R a。
- 根據請求項4的應用,其中所述式(a)化合物為式I化合物: I 其中,R 1和R 3獨立地選自:氫、C 1-C 10烷基、C 3-C 8環烷基、C 6-C 10芳基、C 6-C 10芳基C 1-C 3烷基、C 6-C 10雜芳基、C 6-C 10雜芳基C 1-C 3烷基、、C 1-C 3烷氧基、C 1-C 3烷基氨基、C 1-C 3烷基硫基、C 1-C 3烷基磺醯基、C 1-C 3烷基醯基、C 1-C 3烷基氨基醯基和C 1-C 3烷基氨基磺醯基;其中所述C 1-C 10烷基、C 3-C 8環烷基、C 6-C 10芳基、C 6-C 10芳基氨基、C 6-C 10芳基C 1-C 3烷基、C 6-C 10雜芳基、C 6-C 10雜芳基C 1-C 3烷基、C 1-C 3烷氧基、C 1-C 3烷基氨基、C 1-C 3烷基硫基、C 1-C 3烷基磺醯基、C 1-C 3烷基醯基、C 1-C 3烷基氨基醯基和C 1-C 3烷基氨基磺醯基任選地被1個、2個或3個選自以下的取代基所取代:選自氟、氯、溴和碘的鹵素,硝基、氰基、C 1-C 3烷基、C 1-C 3烷氧基、鹵代C 1-C 3烷基、鹵代C 1-C 3烷基硫基、C 3-C 8環烷基C 1-C 3烷基。
- 根據請求項4的應用,其中所述式(a)化合物為式III化合物: III 其中R 5和R 6獨立地選自:氫、C 1-C 10烷基、C 3-C 8環烷基、C 6-C 10芳基、C 6-C 10芳基C 1-C 3烷基、C 6-C 10雜芳基、C 6-C 10雜芳基C 1-C 3烷基、 C 1-C 3烷氧基、C 1-C 3烷基氨基、C 1-C 3烷基硫基、C 1-C 3烷基磺醯基、C 1-C 3烷基醯基、C 1-C 3烷基氨基醯基和C 1-C 3烷基氨基磺醯基;其中所述C 1-C 10烷基、C 3-C 8環烷基、C 6-C 10芳基、C 6-C 10芳基氨基、C 6-C 10芳基C 1-C 3烷基、C 6-C 10雜芳基、C 6-C 10雜芳基C 1-C 3烷基、C 1-C 3烷氧基、C 1-C 3烷基氨基、C 1-C 3烷基硫基、C 1-C 3烷基磺醯基、C 1-C 3烷基醯基、C 1-C 3烷基氨基醯基和C 1-C 3烷基氨基磺醯基任選地被1個、2個或3個選自以下的取代基所取代:選自氟、氯、溴和碘的鹵素,硝基、氰基、C 1-C 3烷基、C 1-C 3烷氧基、鹵代C 1-C 3烷基、鹵代C 1-C 3烷基硫基、C 3-C 8環烷基C 1-C 3烷基。
- 根據請求項1-7中任一項所述的應用,其中R a、R b獨立地選自:C 1-C 3烷基;苯基、苄基和萘基,其中所述苯基、苄基和萘基任選地被甲基、異丙基、三氟甲基、氟、氯或硝基所取代;環丙基甲基;氰基;羥基。
- 9. 根據請求項5至7中任一項所述的應用,其中R 1、R 3、R 1’、R 3’、R 5和R 6各自獨立地選自:C 1-C 3烷基;苯基、苄基和萘基,其中所述苯基、苄基和萘基任選地被甲基、異丙基、三氟甲基、氟、氯或硝基所取代;環丙基甲基;氰基;羥基。
- 10. 根據請求項5所述的應用,其中R 1、R 3各自獨立地選自:甲基、苄基、苯基、萘基、對甲基苯基、對氟苯基、異丙基苯基、三氟甲硫基苯基、硝基、甲基或氯取代的苯基、環丙基甲基、三氟甲基取代的苯基。
- 根據請求項1至3中任一項的應用,其中所述SARM1酶活性抑制劑為式IV化合物、其藥學上可接受的鹽或其前藥: IV 其中, W選自-CH 2-、-CH=CH-, -C(Me)=C(Me)-, -C(Et)=C(Et)-, -C(O) -、-O-、-S-和-NR 5-, R 5選自氫、C 1-C 10烷基、C 3-C 8環烷基、C 6-C 10芳基、C 6-C 10芳基C 1-C 3烷基、C 6-C 10雜芳基、C 6-C 10雜芳基C 1-C 3烷基、C 1-C 3烷氧基、C 1-C 3烷基氨基、C 1-C 3烷基硫基、C 1-C 3烷基磺醯基、C 1-C 3烷基醯基、C 1-C 3烷基氨基醯基和C 1-C 3烷基氨基磺醯基;其中所述C 1-C 10烷基、C 3-C 8環烷基、C 6-C 10芳基、C 6-C 10芳基氨基、C 6-C 10芳基C 1-C 3烷基、C 6-C 10雜芳基、C 6-C 10雜芳基C 1-C 3烷基、C 1-C 3烷氧基、C 1-C 3烷基氨基、C 1-C 3烷基硫基、C 1-C 3烷基磺醯基、C 1-C 3烷基醯基、C 1-C 3烷基氨基醯基和C 1-C 3烷基氨基磺醯基任選地被1個、2個或3個選自以下的取代基所取代:選自氟、氯、溴和碘的鹵素,硝基、氰基、C 1-C 3烷基、C 1-C 3烷氧基、鹵代C 1-C 3烷基、鹵代C 1-C 3烷基硫基、C 3-C 8環烷基C 1-C 3烷基; R 7和R 8獨立地選自羥基、氯、溴、C 1-C 10烷基和C 1-C 3烷氧基; m和n獨立地選自0、1、2和3。
- 根據請求項1至3中任一項的應用,其中所述SARM1酶活性抑制劑為選自以下式VI化合物或其藥學上可接受的鹽或其前藥: VI 其中, L選自C 1-C 6烷基、C 6-C 10芳基和C 6-C 10雜芳基,所述C 1-C 6烷基、C 6-C 10芳基和C 6-C 10雜芳基任選地被1個或2個選自以下的取代基所取代:選自氟、氯、溴的鹵素,C 1-C 3烷基、C 1-C 3烷氧基、C 3-C 8環烷基; A選自氨基磺醯基、氨基醯基和C 1-C 5烷基氨基; R 9選自C 6-C 10芳基、C 6-C 10雜芳基、C 6-C 10芳基C 1-C 3烷基和C 6-C 10雜芳基C 1-C 3烷基,其中所述C 6-C 10芳基、C 6-C 10雜芳基、C 6-C 10芳基C 1-C 3烷基和C 6-C 10雜芳基C 1-C 3烷基任選地被1個、2個選自以下的取代基所取代:選自氟、氯、溴的鹵素, C 1-C 3烷基、C 1-C 3烷氧基、C 3-C 8環烷基、C 6-C 10芳基氨基、二(C 6-C 10芳基)氨基。
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