SG11201803646YA - Combinatorial sets of nucleic acid barcodes for analysis of nucleic acids associated with single cells - Google Patents

Combinatorial sets of nucleic acid barcodes for analysis of nucleic acids associated with single cells

Info

Publication number
SG11201803646YA
SG11201803646YA SG11201803646YA SG11201803646YA SG11201803646YA SG 11201803646Y A SG11201803646Y A SG 11201803646YA SG 11201803646Y A SG11201803646Y A SG 11201803646YA SG 11201803646Y A SG11201803646Y A SG 11201803646YA SG 11201803646Y A SG11201803646Y A SG 11201803646YA
Authority
SG
Singapore
Prior art keywords
analysis
single cells
nucleic acid
acids associated
nucleic acids
Prior art date
Application number
SG11201803646YA
Inventor
Gary Withey
Original Assignee
Atreca Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Atreca Inc filed Critical Atreca Inc
Publication of SG11201803646YA publication Critical patent/SG11201803646YA/en

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034Isolating an individual clone by screening libraries
    • C12N15/1065Preparation or screening of tagged libraries, e.g. tagged microorganisms by STM-mutagenesis, tagged polynucleotides, gene tags
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1096Processes for the isolation, preparation or purification of DNA or RNA cDNA Synthesis; Subtracted cDNA library construction, e.g. RT, RT-PCR
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6806Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2523/00Reactions characterised by treatment of reaction samples
    • C12Q2523/30Characterised by physical treatment
    • C12Q2523/319Photocleavage, photolysis, photoactivation
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2525/00Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
    • C12Q2525/10Modifications characterised by
    • C12Q2525/173Modifications characterised by incorporating a polynucleotide run, e.g. polyAs, polyTs
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2525/00Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
    • C12Q2525/10Modifications characterised by
    • C12Q2525/191Modifications characterised by incorporating an adaptor
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2535/00Reactions characterised by the assay type for determining the identity of a nucleotide base or a sequence of oligonucleotides
    • C12Q2535/122Massive parallel sequencing
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/149Particles, e.g. beads
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/159Microreactors, e.g. emulsion PCR or sequencing, droplet PCR, microcapsules, i.e. non-liquid containers with a range of different permeability's for different reaction components
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/179Nucleic acid detection characterized by the use of physical, structural and functional properties the label being a nucleic acid
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/185Nucleic acid dedicated to use as a hidden marker/bar code, e.g. inclusion of nucleic acids to mark art objects or animals
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2565/00Nucleic acid analysis characterised by mode or means of detection
    • C12Q2565/50Detection characterised by immobilisation to a surface
    • C12Q2565/514Detection characterised by immobilisation to a surface characterised by the use of the arrayed oligonucleotides as identifier tags, e.g. universal addressable array, anti-tag or tag complement array
SG11201803646YA 2015-11-04 2016-11-04 Combinatorial sets of nucleic acid barcodes for analysis of nucleic acids associated with single cells SG11201803646YA (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US201562250900P 2015-11-04 2015-11-04
PCT/US2016/060576 WO2017079593A1 (en) 2015-11-04 2016-11-04 Combinatorial sets of nucleic acid barcodes for analysis of nucleic acids associated with single cells

Publications (1)

Publication Number Publication Date
SG11201803646YA true SG11201803646YA (en) 2018-05-30

Family

ID=57396822

Family Applications (1)

Application Number Title Priority Date Filing Date
SG11201803646YA SG11201803646YA (en) 2015-11-04 2016-11-04 Combinatorial sets of nucleic acid barcodes for analysis of nucleic acids associated with single cells

Country Status (9)

Country Link
US (2) US11098304B2 (en)
EP (1) EP3371309B1 (en)
JP (1) JP7064439B2 (en)
KR (1) KR20180097536A (en)
CN (1) CN108473984A (en)
AU (1) AU2016348439B2 (en)
CA (1) CA3004310A1 (en)
SG (1) SG11201803646YA (en)
WO (1) WO2017079593A1 (en)

Families Citing this family (76)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US8835358B2 (en) 2009-12-15 2014-09-16 Cellular Research, Inc. Digital counting of individual molecules by stochastic attachment of diverse labels
US9677118B2 (en) 2014-04-21 2017-06-13 Natera, Inc. Methods for simultaneous amplification of target loci
US20190010543A1 (en) 2010-05-18 2019-01-10 Natera, Inc. Methods for simultaneous amplification of target loci
US11939634B2 (en) 2010-05-18 2024-03-26 Natera, Inc. Methods for simultaneous amplification of target loci
GB2504240B (en) 2012-02-27 2015-05-27 Cellular Res Inc Compositions and kits for molecular counting of nucleic acids
US10752949B2 (en) 2012-08-14 2020-08-25 10X Genomics, Inc. Methods and systems for processing polynucleotides
US9951386B2 (en) 2014-06-26 2018-04-24 10X Genomics, Inc. Methods and systems for processing polynucleotides
US10323279B2 (en) 2012-08-14 2019-06-18 10X Genomics, Inc. Methods and systems for processing polynucleotides
US9388465B2 (en) 2013-02-08 2016-07-12 10X Genomics, Inc. Polynucleotide barcode generation
US9567631B2 (en) 2012-12-14 2017-02-14 10X Genomics, Inc. Methods and systems for processing polynucleotides
US11591637B2 (en) 2012-08-14 2023-02-28 10X Genomics, Inc. Compositions and methods for sample processing
US9701998B2 (en) 2012-12-14 2017-07-11 10X Genomics, Inc. Methods and systems for processing polynucleotides
CA2881685C (en) 2012-08-14 2023-12-05 10X Genomics, Inc. Microcapsule compositions and methods
US10584381B2 (en) 2012-08-14 2020-03-10 10X Genomics, Inc. Methods and systems for processing polynucleotides
US10829816B2 (en) 2012-11-19 2020-11-10 Apton Biosystems, Inc. Methods of analyte detection
EP2920725B1 (en) 2012-11-19 2021-11-10 Apton Biosystems, Inc. Digital analysis of molecular analytes using single molecule detection
US10533221B2 (en) 2012-12-14 2020-01-14 10X Genomics, Inc. Methods and systems for processing polynucleotides
KR102536833B1 (en) 2013-08-28 2023-05-26 벡톤 디킨슨 앤드 컴퍼니 Massively parallel single cell analysis
RU2717641C2 (en) 2014-04-21 2020-03-24 Натера, Инк. Detection of mutations and ploidy in chromosomal segments
EP4053292A1 (en) 2014-06-26 2022-09-07 10X Genomics, Inc. Methods of analyzing nucleic acids from individual cells or cell populations
CA2972969A1 (en) 2015-01-12 2016-07-21 10X Genomics, Inc. Processes and systems for preparing nucleic acid sequencing libraries and libraries prepared using same
EP3262407B1 (en) 2015-02-24 2023-08-30 10X Genomics, Inc. Partition processing methods and systems
EP3262192B1 (en) 2015-02-27 2020-09-16 Becton, Dickinson and Company Spatially addressable molecular barcoding
EP4180535A1 (en) 2015-03-30 2023-05-17 Becton, Dickinson and Company Methods and compositions for combinatorial barcoding
EP3286326A1 (en) 2015-04-23 2018-02-28 Cellular Research, Inc. Methods and compositions for whole transcriptome amplification
US11479812B2 (en) 2015-05-11 2022-10-25 Natera, Inc. Methods and compositions for determining ploidy
AU2016319110B2 (en) 2015-09-11 2022-01-27 The General Hospital Corporation Full interrogation of nuclease DSBs and sequencing (FIND-seq)
US10619186B2 (en) 2015-09-11 2020-04-14 Cellular Research, Inc. Methods and compositions for library normalization
US10301677B2 (en) 2016-05-25 2019-05-28 Cellular Research, Inc. Normalization of nucleic acid libraries
US10202641B2 (en) 2016-05-31 2019-02-12 Cellular Research, Inc. Error correction in amplification of samples
US10640763B2 (en) 2016-05-31 2020-05-05 Cellular Research, Inc. Molecular indexing of internal sequences
SG11201901733PA (en) 2016-09-26 2019-04-29 Cellular Res Inc Measurement of protein expression using reagents with barcoded oligonucleotide sequences
US10011870B2 (en) 2016-12-07 2018-07-03 Natera, Inc. Compositions and methods for identifying nucleic acid molecules
EP4029939B1 (en) 2017-01-30 2023-06-28 10X Genomics, Inc. Methods and systems for droplet-based single cell barcoding
US11319583B2 (en) 2017-02-01 2022-05-03 Becton, Dickinson And Company Selective amplification using blocking oligonucleotides
CA3056765C (en) 2017-03-17 2024-04-02 Apton Biosystems, Inc. Sequencing and high resolution imaging
MX2019013993A (en) * 2017-05-23 2020-07-28 Harvard College Multiplex end-tagging amplification of nucleic acids.
SG11201901822QA (en) 2017-05-26 2019-03-28 10X Genomics Inc Single cell analysis of transposase accessible chromatin
US20180340169A1 (en) 2017-05-26 2018-11-29 10X Genomics, Inc. Single cell analysis of transposase accessible chromatin
AU2018281745B2 (en) 2017-06-05 2022-05-19 Becton, Dickinson And Company Sample indexing for single cells
EP3672612A4 (en) 2017-08-23 2021-09-29 The General Hospital Corporation Engineered crispr-cas9 nucleases with altered pam specificity
WO2019055852A1 (en) * 2017-09-15 2019-03-21 Apton Biosystems, Inc. Heterogeneous single cell profiling using molecular barcoding
WO2019075197A1 (en) 2017-10-11 2019-04-18 The General Hospital Corporation Methods for detecting site-specific and spurious genomic deamination induced by base editing technologies
SG11201913654QA (en) 2017-11-15 2020-01-30 10X Genomics Inc Functionalized gel beads
EP4212629A1 (en) * 2017-11-17 2023-07-19 10X Genomics, Inc. Methods and systems for associating physical and genetic properties of biological particles
US10829815B2 (en) 2017-11-17 2020-11-10 10X Genomics, Inc. Methods and systems for associating physical and genetic properties of biological particles
WO2019126209A1 (en) * 2017-12-19 2019-06-27 Cellular Research, Inc. Particles associated with oligonucleotides
WO2019191321A1 (en) * 2018-03-28 2019-10-03 10X Genomics, Inc. Nucleic acid enrichment within partitions
EP3775271A1 (en) 2018-04-06 2021-02-17 10X Genomics, Inc. Systems and methods for quality control in single cell processing
US11466313B2 (en) 2018-04-13 2022-10-11 The Board Of Trustees Of The Leland Stanford Junior University Nucleic acid quantification using concentration-specific barcodes
CN112313241A (en) 2018-04-17 2021-02-02 总医院公司 Sensitive in vitro assay of substrate preference and site for nucleic acid binding, modification, and cleavage reagents
JP7407128B2 (en) 2018-05-03 2023-12-28 ベクトン・ディキンソン・アンド・カンパニー High-throughput multi-omics sample analysis
WO2019213237A1 (en) 2018-05-03 2019-11-07 Becton, Dickinson And Company Molecular barcoding on opposite transcript ends
US11525159B2 (en) 2018-07-03 2022-12-13 Natera, Inc. Methods for detection of donor-derived cell-free DNA
CA3110800A1 (en) * 2018-07-12 2020-01-16 Board Of Regents, The University Of Texas System Molecular neighborhood detection by oligonucleotides
EP3844299A1 (en) * 2018-08-28 2021-07-07 Becton Dickinson and Company Sample multiplexing using carbohydrate-binding and membrane-permeable reagents
US20220034881A1 (en) * 2018-09-24 2022-02-03 Bristol-Myers Squibb Company Barcoded peptide-mhc complexes and uses thereof
CN112805389A (en) * 2018-10-01 2021-05-14 贝克顿迪金森公司 Determination of 5' transcript sequences
JP2022506546A (en) 2018-11-08 2022-01-17 ベクトン・ディキンソン・アンド・カンパニー Single-cell whole transcriptome analysis using random priming
EP3894552A1 (en) 2018-12-13 2021-10-20 Becton, Dickinson and Company Selective extension in single cell whole transcriptome analysis
EP3908660A4 (en) * 2019-01-07 2022-11-02 Pivot Bio, Inc. Plant colonization assays using natural microbial barcodes
ES2945227T3 (en) 2019-01-23 2023-06-29 Becton Dickinson Co Antibody Associated Oligonucleotides
CN113767178A (en) 2019-03-11 2021-12-07 10X基因组学有限公司 Systems and methods for processing optically labeled beads
WO2020247950A1 (en) * 2019-06-07 2020-12-10 Bio-Rad Laboratories, Inc. Multiple beads per droplet resolution
US11939622B2 (en) 2019-07-22 2024-03-26 Becton, Dickinson And Company Single cell chromatin immunoprecipitation sequencing assay
US11773436B2 (en) 2019-11-08 2023-10-03 Becton, Dickinson And Company Using random priming to obtain full-length V(D)J information for immune repertoire sequencing
WO2021128036A1 (en) * 2019-12-25 2021-07-01 苏州绘真生物科技有限公司 Kit for constructing human single-cell tcr sequencing library and application thereof
WO2021146183A1 (en) * 2020-01-13 2021-07-22 Fluent Biosciences Inc. Reverse transcription during template emulsification
CN115244184A (en) 2020-01-13 2022-10-25 贝克顿迪金森公司 Methods and compositions for quantifying protein and RNA
EP4106769A4 (en) * 2020-02-17 2024-03-27 Universal Sequencing Tech Corporation Methods of barcoding nucleic acid for detection and sequencing
WO2021231779A1 (en) 2020-05-14 2021-11-18 Becton, Dickinson And Company Primers for immune repertoire profiling
WO2021241721A1 (en) 2020-05-29 2021-12-02 国立研究開発法人理化学研究所 Method for treating cell population and method for analyzing genes included in cell population
US11932901B2 (en) 2020-07-13 2024-03-19 Becton, Dickinson And Company Target enrichment using nucleic acid probes for scRNAseq
EP4247967A1 (en) 2020-11-20 2023-09-27 Becton, Dickinson and Company Profiling of highly expressed and lowly expressed proteins
WO2023048300A1 (en) * 2021-09-27 2023-03-30 国立大学法人東京大学 Cell labeling molecule and method for analyzing cell
GB202211182D0 (en) * 2022-08-01 2022-09-14 Univ Oxford Innovation Ltd Bead-hashing

Family Cites Families (39)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5643722A (en) 1994-05-11 1997-07-01 Trustees Of Boston University Methods for the detection and isolation of proteins
US5962271A (en) 1996-01-03 1999-10-05 Cloutech Laboratories, Inc. Methods and compositions for generating full-length cDNA having arbitrary nucleotide sequence at the 3'-end
EP1447127B1 (en) 2001-02-23 2007-07-04 Japan Science and Technology Agency Apparatus for producing emulsion
US20030175749A1 (en) 2001-12-08 2003-09-18 Jong-Yoon Chun Annealing control primer and its uses
JP4777238B2 (en) 2004-03-23 2011-09-21 独立行政法人科学技術振興機構 Method and apparatus for generating microdroplets
ATE510930T1 (en) 2005-08-02 2011-06-15 Rubicon Genomics Inc COMPOSITIONS AND METHODS FOR EDITING AND AMPLIFICATION OF DNA USING MULTIPLE ENZYMES IN A SINGLE REACTION
WO2008157696A2 (en) * 2007-06-19 2008-12-24 Stratos Genomics Inc. High throughput nucleic acid sequencing by expansion
WO2009154303A2 (en) 2008-06-18 2009-12-23 Riken A method of manufacturing a mixture of amplified double-stranded nucleic acids comprising unknown sequence
DK3495498T3 (en) 2009-03-30 2022-01-17 Illumina Inc GENE EXPRESSION ANALYSIS IN SINGLE CELLS
CN102439177B (en) * 2009-04-02 2014-10-01 弗卢伊蒂格姆公司 Multi-primer amplification method for barcoding of target nucleic acids
CN101864477A (en) * 2009-04-15 2010-10-20 上海聚类生物科技有限公司 Method for carrying out determination on microRNA expression profiles by utilizing high-throughput sequencing single-channel multiplexing technology
CN102933721B (en) 2010-06-09 2015-12-02 凯津公司 For the composite sequence barcode of high flux screening
US9902950B2 (en) * 2010-10-08 2018-02-27 President And Fellows Of Harvard College High-throughput single cell barcoding
US20140057799A1 (en) 2010-12-16 2014-02-27 Gigagen System and Methods for Massively Parallel Analysis of Nucleic Acids in Single Cells
CA3078215A1 (en) 2011-04-28 2012-11-01 Department Of Veterans Affairs Identification of polynucleotides associated with a sample
SG194745A1 (en) * 2011-05-20 2013-12-30 Fluidigm Corp Nucleic acid encoding reactions
RU2663354C2 (en) * 2011-12-16 2018-08-03 Таргитджин Байотекнолоджиз Лтд Compositions and methods for modification of specified target nucleic acid sequence
EP3597764A3 (en) * 2012-02-01 2020-05-06 SGI-DNA, Inc. Material and methods for the synthesis of error-minimized nucleic acid molecules
SG11201406538VA (en) * 2012-04-13 2014-11-27 Sequenta Inc Detection and quantitation of sample contamination in immune repertoire analysis
AU2013293240A1 (en) * 2012-07-24 2015-03-05 Adaptive Biotechnologies Corp. Single cell analysis using sequence tags
JP6338221B2 (en) 2012-10-24 2018-06-06 タカラ バイオ ユーエスエー, インコーポレイテッド Template switch based method for producing nucleic acid products
WO2014071361A1 (en) * 2012-11-05 2014-05-08 Rubicon Genomics Barcoding nucleic acids
SG10201707394PA (en) * 2013-03-15 2017-10-30 Adaptive Biotechnologies Corp Uniquely tagged rearranged adaptive immune receptor genes in a complex gene set
US10119134B2 (en) * 2013-03-15 2018-11-06 Abvitro Llc Single cell bar-coding for antibody discovery
US20160122753A1 (en) 2013-06-12 2016-05-05 Tarjei Mikkelsen High-throughput rna-seq
CN117568449A (en) 2013-06-27 2024-02-20 10X基因组学有限公司 Compositions and methods for sample processing
US9708657B2 (en) * 2013-07-01 2017-07-18 Adaptive Biotechnologies Corp. Method for generating clonotype profiles using sequence tags
CN105579587A (en) 2013-08-23 2016-05-11 惠氏公司 Methods and compositions for cDNA synthesis and single-cell transcriptome profiling using template switching reaction
KR102536833B1 (en) * 2013-08-28 2023-05-26 벡톤 디킨슨 앤드 컴퍼니 Massively parallel single cell analysis
WO2015057319A1 (en) 2013-10-17 2015-04-23 Clontech Laboratories, Inc. Methods for adding adapters to nucleic acids and compositions for practicing the same
WO2015094861A1 (en) 2013-12-17 2015-06-25 Clontech Laboratories, Inc. Methods for adding adapters to nucleic acids and compositions for practicing the same
JP6608368B2 (en) * 2013-12-30 2019-11-20 アトレカ インコーポレイテッド Method for analyzing nucleic acids associated with single cells using nucleic acid barcodes
EP3456846B1 (en) * 2014-04-21 2022-06-22 President and Fellows of Harvard College Systems and methods for barcoding nucleic acid
EP3143139B1 (en) 2014-05-14 2021-12-15 Ruprecht-Karls-Universität Heidelberg Synthesis of double-stranded nucleic acids
EP4053292A1 (en) * 2014-06-26 2022-09-07 10X Genomics, Inc. Methods of analyzing nucleic acids from individual cells or cell populations
KR102541849B1 (en) * 2014-09-15 2023-06-09 에이비비트로, 엘엘씨 High-throughput nucleotide library sequencing
SG11201706636PA (en) 2015-02-27 2017-09-28 Fluidigm Corp Single-cell nucleic acids for high-throughput studies
EP4180535A1 (en) 2015-03-30 2023-05-17 Becton, Dickinson and Company Methods and compositions for combinatorial barcoding
EP3286326A1 (en) * 2015-04-23 2018-02-28 Cellular Research, Inc. Methods and compositions for whole transcriptome amplification

Also Published As

Publication number Publication date
CA3004310A1 (en) 2017-05-11
EP3371309B1 (en) 2023-07-05
WO2017079593A1 (en) 2017-05-11
AU2016348439B2 (en) 2023-03-09
US20180320171A1 (en) 2018-11-08
US20210380974A1 (en) 2021-12-09
JP7064439B2 (en) 2022-05-10
EP3371309A1 (en) 2018-09-12
KR20180097536A (en) 2018-08-31
US11098304B2 (en) 2021-08-24
AU2016348439A1 (en) 2018-05-10
CN108473984A (en) 2018-08-31
JP2018538006A (en) 2018-12-27

Similar Documents

Publication Publication Date Title
SG11201803646YA (en) Combinatorial sets of nucleic acid barcodes for analysis of nucleic acids associated with single cells
HK1250757A1 (en) Nucleic acid sequence analysis from single cells
IL249617A0 (en) Methods of analyzing nucleic acids from individual cells or cell populations
SG11201605344YA (en) Analysis of nucleic acids associated with single cells using nucleic acid barcodes
HK1250245A1 (en) Spatially distinguished, multiplex nucleic acid analysis of biological specimens
SG11201706636PA (en) Single-cell nucleic acids for high-throughput studies
HK1250330A1 (en) Enhancing the effect of car-engineered t cells by means of nucleic acid vaccination
IL249619A0 (en) Analysis of nucleic acid sequences
SG11201610315YA (en) Sample preparation for nucleic acid amplification
EP3134550A4 (en) High-throughput structure determination using nucleic acid calipers
GB2581599B (en) Tagging nucleic acid molecules from single cells for phased sequencing
GB201403216D0 (en) Nucleic acid sample preparation
GB201413318D0 (en) Nucleic acid sample preparation
DK3320111T3 (en) Sample preparation for nucleic acid amplification
GB201506669D0 (en) Nucleic acid sample enrichment
GB201415674D0 (en) Nucleic acid analysis
IL255081A0 (en) Detection of nucleic acid molecules
GB2553907B (en) Nucleic acid analyzer
GB201516685D0 (en) Nucleic acid molecules with enhanced activity
GB201519323D0 (en) Nucleic acid analysis
GB201503845D0 (en) Nucleic acid analysis
GB201522270D0 (en) Nucleic acid sample enrichment
GB201514532D0 (en) Nucleic acid sample enrichment
GB201508859D0 (en) Nucleic acid sample enrichment
GB201406580D0 (en) Nucleic Acid Sample preparation