JP7092776B2 - crmp2のSUMO関連修飾の小分子拮抗物質及びその使用 - Google Patents
crmp2のSUMO関連修飾の小分子拮抗物質及びその使用 Download PDFInfo
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- JP7092776B2 JP7092776B2 JP2019542201A JP2019542201A JP7092776B2 JP 7092776 B2 JP7092776 B2 JP 7092776B2 JP 2019542201 A JP2019542201 A JP 2019542201A JP 2019542201 A JP2019542201 A JP 2019542201A JP 7092776 B2 JP7092776 B2 JP 7092776B2
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- FQCQGOZEWWPOKI-UHFFFAOYSA-K trisalicylate-choline Chemical compound [Mg+2].C[N+](C)(C)CCO.OC1=CC=CC=C1C([O-])=O.OC1=CC=CC=C1C([O-])=O.OC1=CC=CC=C1C([O-])=O FQCQGOZEWWPOKI-UHFFFAOYSA-K 0.000 description 1
- JFJZZMVDLULRGK-URLMMPGGSA-O tubocurarine Chemical compound C([C@H]1[N+](C)(C)CCC=2C=C(C(=C(OC3=CC=C(C=C3)C[C@H]3C=4C=C(C(=CC=4CCN3C)OC)O3)C=21)O)OC)C1=CC=C(O)C3=C1 JFJZZMVDLULRGK-URLMMPGGSA-O 0.000 description 1
- 229960001844 tubocurarine Drugs 0.000 description 1
- ZDPHROOEEOARMN-UHFFFAOYSA-N undecanoic acid Chemical class CCCCCCCCCCC(O)=O ZDPHROOEEOARMN-UHFFFAOYSA-N 0.000 description 1
- 210000000689 upper leg Anatomy 0.000 description 1
- 229960002004 valdecoxib Drugs 0.000 description 1
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- 229960001364 valnoctamide Drugs 0.000 description 1
- 229940102566 valproate Drugs 0.000 description 1
- MSRILKIQRXUYCT-UHFFFAOYSA-M valproate semisodium Chemical compound [Na+].CCCC(C(O)=O)CCC.CCCC(C([O-])=O)CCC MSRILKIQRXUYCT-UHFFFAOYSA-M 0.000 description 1
- WKOLLVMJNQIZCI-UHFFFAOYSA-N vanillic acid Chemical compound COC1=CC(C(O)=O)=CC=C1O WKOLLVMJNQIZCI-UHFFFAOYSA-N 0.000 description 1
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- 108091058553 ω-conotoxin GVIA Proteins 0.000 description 1
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Description
本出願は、2017年2月3日出願の米国仮出願第62/454,475号及び2017年5月15日出願の米国仮出願第62/506,298号に対する優先権及びこれらの利益を主張するものであり、これらは参照によりその全体が本明細書に組み入れられる。
本発明は、医薬品化学分野に属する。詳細には、本発明は、コラプシン反応媒介タンパク質2(CRMP2)の小ユビキチン様修飾物質(SUMO)関連修飾(SUMO化)の拮抗物質として機能する、ピペリジニル-ベンゾイミダゾール構造を有する新たなクラスの小分子、ならびに電位開口型ナトリウムチャネル1.7(Nav1.7)関連の掻痒、嗅覚消失、片頭痛事象、及び/または疼痛(例えば、神経障害性疼痛)の処置用治療薬としてのその使用に関する。
電位開口型Nav1.7ナトリウムチャネルは、侵害受容性疼痛に関連する神経節内の末梢神経系(背根神経節(DRG)、三叉神経及び交感神経節(例えば、Dib-Hajj SD,Yang Y,Black JA,& Waxman SG(2013) Nature reviews Neuroscience 14:49-62)を参照)、ならびに嗅上皮(例えば、Ahn HS,et al.,(2011) Molecular pain 7:32を参照)を含む)において優先的に発現される。そこでNav1.7は、刺激に応答して活動電位を発火するのに必要な電位活性閾値を調節する(例えば、Estacion M,et al.(2011) Molecular pain 7:92;Momin A,& Wood JN(2008) Curr Opin Neurobiol 18:383-388を参照)。
a)化合物がGlu377の骨格NH-基からの水素結合を許容する、水素結合相互作用を形成する;
b)化合物がLys23の側鎖-NH2基からの水素結合を許容する、水素結合相互作用を形成する;
c)化合物がGly373の骨格CO-基に対する水素結合を供与する、水素結合相互作用を形成する;
d)化合物がGlu377の側鎖-COOH基に対する水素結合を供与する、水素結合相互作用を形成する;
e)化合物がArg440の側鎖グアニジン基からの水素結合を許容する、水素結合相互作用を形成する;
f)化合物がAsp376の側鎖COOH-基に対する水素結合を供与する、水素結合相互作用を形成する;
g)Lys23の側鎖-NH2基との静電気的相互作用を形成する;及び
h)Asp376の側鎖-COOH基との静電気的相互作用を形成する;
のうちの1つ以上を有することが示されている化合物であって、
化合物の1つ以上の重原子が、結合ポケットを規定する以下のCRMP2残基:Lys23、Val25、Ser30、Tyr32、Met64、Ser319、Ser322、Trp366、Val370、Val371、Gly373、Lys374、Met375、Asp376、Glu377、Gln379、Pro414、Asp415、Ser416、Val417、及びArg440の重原子のいずれかの6Å範囲内に位置するように、結合ポケットの親油性結合領域とのファンデルワールス相互作用を形成することもできる、化合物を選択することを含む、方法を提供する。
本明細書で使用する「SUMO化」という用語は、小ユビキチン様修飾物質(SUMO)ファミリーのタンパク質による細胞タンパク質の翻訳後修飾を指す。SUMO化は、3つのタイプのSUMO化酵素:活性化酵素E1(2つのサブユニット、SAE1及びSAE2/Uba2から構成される)、結合酵素E2(Ubc9)、及びおよそ10種のE3リガーゼのうちの1つ、により触媒される複数のステップを必要とする。
(例えば、
以下の実施例は、本発明の化合物、組成物、及び方法の例示であり、ただし限定的なものではない。臨床的治療で通常遭遇し、当業者に明らかである様々な条件及びパラメーターにおける他の好適な変更及び適合は、本発明の趣旨内及び範囲内である。
本実施例は、本明細書に記載のピペリジニル-ベンゾイミダゾール化合物の合成経路を説明するものである。
4-ヒドロキシ-3メトキシ安息香酸エチルの合成
3-メトキシ-4-((4-(トリフルオロメトキシ)ベンジル)オキシ)ベンゾイルクロリドの合成
3-メトキシ-4-((4-(トリフルオロメチル)ベンジル)オキシ)安息香酸の合成
13C NMR (101 MHz, クロロホルム-d) δ 170.36, 156.25, 149.63, 149.11, 140.59, 130.66, 130.34, 130.02, 129.69, 128.78, 127.62 - 126.52 (m), 125.69-125.48 (m), 122.36, 119.70, 113.08, 111.13, 72.24 - 65.68 (m), 56.02 (d, J = 15.2 Hz), 36.78 (d, J = 5.0 Hz)。
4-((4-シアノベンジル)オキシ)-3-メトキシベンゾイルクロリドの合成
4-(1H-ベンゾ[d]イミダゾール-2-イル)ピペリジン-1-イル)(4-ヒドロキシ-3-メトキシフェニル)メタノンの合成
HRMS: MH+ = 460.20307 (理論値 460.20310)
(4-(1-(3-フルオロベンジル)-1H-ベンゾ[d]イミダゾール-2-イル)ピペリジン-1-イル)(4-((3-フルオロベンジル)オキシ)-3-メトキシフェニル)メタノン
1H NMR (400 MHz, クロロホルム-d) δ 7.77 (d, J = 7.9 Hz, 1H), 7.36 - 7.09 (m, 7H), 7.00 (d, J = 1.8 Hz, 1H), 6.99 - 6.94 (m, 2H), 6.91 (dd, J = 8.2, 1.9 Hz, 1H), 6.81 (d, J = 8.3 Hz, 1H), 6.77 (d, J = 8.4 Hz, 1H), 6.71 (d, J = 9.6 Hz, 1H), 5.37 (s, 2H), 5.14 (s, 2H), 3.89 (s, 3H), 3.89 (bs, 1H, 一重項下の幅広い基底として見られる), 3.11 - 2.84 (m, 4H), 2.18 - 2.03 (m, 2H), 1.94 - 1.76 (m, 2H)。
3-メトキシ-4-((3-(トリフルオロメチル)ベンジル)オキシ)ベンゾイルクロリドの合成
(4-(1-(4-フルオロベンジル)-1H-ベンゾ[d]イミダゾール-2-イル)ピペリジン-1-イル)(4-((4-フルオロベンジル)オキシ)-3-メトキシフェニル)メタノン(AZ195)の合成
13C NMR (101 MHz, クロロホルム-d) δ 170.26, 156.66, 149.57, 149.09, 134.96, 132.35 (d, J = 3.1 Hz), 131.64, 129.21, 129.13, 128.82, 127.65, 127.57, 122.84, 122.45, 119.69, 119.55, 116.23, 116.01, 115.61, 115.39, 113.06, 111.06, 109.56, 70.28, 56.06 (d, J = 5.7 Hz), 46.12, 34.73, 31.05。
(4-(1H-ベンゾ[d]イミダゾール-2-イル)ピペリジン-1-イル)(モルホリノ)メタノン(AZ198)の合成
2-(1-(フェニルスルホニル)ピペリジン-4-イル)-1H-ベンゾ[d]イミダゾール(AZ158)の合成
2-(1-((4-メトキシフェニル)スルホニル)ピペリジン-4-イル)-1H-ベンゾ[d]イミダゾール(AZ159)の合成
13C NMR (101 MHz, DMSO-d6) δ 163.09, 157.21, 143.27, 134.64, 130.17, 127.38, 122.04, 121.30, 118.78, 114.98, 111.26, 56.19, 46.02, 34.91, 29.88。
2-(1-((4-(トリフルオロメトキシ)フェニル)スルホニル)ピペリジン-4-イル)-1H-ベンゾ[d]イミダゾール(AZ160)の合成
2-(1-((4-フルオロフェニル)スルホニル)ピペリジン-4-イル)-1H-ベンゾ[d]イミダゾール(AZ161)の合成
13C NMR (101 MHz, DMSO-d6) δ 166.27, 163.78, 157.16, 143.27 , 132.37 (d, J = 2.5 Hz), 130.97 (t, J = 10.7 Hz), 122.05 , 121.31 , 118.90 - 118.57 (m), 117.06 (dd, J = 22.5, 12.1 Hz), 111.26 (d, J = 10.4 Hz), 45.97 , 34.81 , 29.92。
2-(1-((4-(トリフルオロメチル)フェニル)スルホニル)ピペリジン-4-イル)-1H-ベンゾ[d]イミダゾール(AZ162)の合成
2-(1-((3,4-ジフルオロフェニル)スルホニル)ピペリジン-4-イル)-1H-ベンゾ[d]イミダゾール(AZ190)の合成
2-(1-((4-フェノキシフェニル)スルホニル)ピペリジン-4-イル)-1H-ベンゾ[d]イミダゾール(AZ192)の合成
4-((4-(1H-ベンゾ[d]イミダゾール-2-イル)ピペリジン-1-イル)スルホニル)ベンゾニトリル(AZ193)の合成
2-(1-(4-(ベンジルオキシ)ベンジル)ピペリジン-4-イル)-1H-ベンゾ[d]イミダゾール(AZ203)の合成
2-(1-(4-(4-メトキシフェノキシ)ベンジル)ピペリジン-4-イル)-1H-ベンゾ[d]イミダゾール(AZ205)の合成
2-(1-(4-(4-フルオロフェノキシ)ベンジル)ピペリジン-4-イル)-1H-ベンゾ[d]イミダゾール(AZ206)の合成
(4-(1H-ベンゾ[d]イミダゾール-2-イル)ピペリジン-1-イル)(3,5-ジメトキシフェニル)メタノン(AZ217)の合成:
Nav1.7の喪失が、内因性オピオイドの上方制御を通じて痛覚消失をもたらす可能性があることを認識し(例えば、Minett MS,et al.(2012) Nature communications 3:791を参照)、ピペリジニル-ベンゾイミダゾール化合物がオピオイド系に係合可能であるかを決定するための実験を行った。注目すべきは、AZ194がプロエンケファリンに対するmRNAレベルを上方制御し、AZ208
この実施例は、E2ユビキチン結合酵素Ubc9がCRMP2と係合(例えば、結合、ドッキング)するCRMP2内の結合ポケットの同定及び特徴づけについて説明する。加えて、この実施例は、特定の小分子化合物における、同定されたCRMP2結合ポケットを通じてCRMP2と結合し、Ubc9とは結合しない能力について実証する。
1)以下の能力のうちの1つ以上:
a)化合物がGlu377の骨格NH-基からの水素結合を許容する、水素結合相互作用を形成する能力;
b)化合物がLys23の側鎖-NH2基からの水素結合を許容する、水素結合相互作用を形成する能力;
c)化合物がGly373の骨格CO-基に対する水素結合を供与する、水素結合相互作用を形成する能力;
d)化合物がGlu377の側鎖-COOH基に対する水素結合を供与する、水素結合相互作用を形成する能力;
e)化合物がArg440の側鎖グアニジン基からの水素結合を許容する、水素結合相互作用を形成する能力;
f)化合物がAsp376の側鎖COOH-基に対する水素結合を供与する、水素結合相互作用を形成する能力;
g)Lys23の側鎖-NH2基との静電気的相互作用を形成する能力;及び
h)Asp376の側鎖-COOH基との静電気的相互作用を形成する能力;ならびに
2)化合物の1つ以上の重原子が、同定された結合ポケットを規定する以下のCRMP2残基:Lys23、Val25、Ser30、Tyr32、Met64、Ser319、Ser322、Trp366、Val370、Val371、Gly373、Lys374、Met375、Asp376、Glu377、Gln379、Pro414、Asp415、Ser416、Val417、及びArg440の重原子のいずれかの6Å範囲内に位置するように、結合ポケットの親油性結合領域とのファンデルワールス相互作用を形成する能力。
この実施例は、CRMP2 SUMO化の標的化が、シナプス前Nav1.7局在化を低下させることを実証する。
この実施例では、AZ化合物によるナトリウム流入の阻害の評価(図27)について説明する。初代ラット感覚ニューロンをFura2-AMで充填し、指示化合物の不在下(対照、0.01% DMSO)または5μM(AZ233の場合は1μM)存在下で、30μMのベラトリジンでNa+チャネルを開放するよう作動させた。棒グラフは、4匹の別々のラットからの条件当たり少なくとも391細胞からの正規化された蛍光平均±s.e.m.を表す。プロトタイプCRMP2 SUMO化阻害物質(AZ194)について、各実験で試験した。
この実施例は、AZ194がNaV1.7チャネルを直接的にブロックしないことを実証する。初代ラット感覚ニューロンを、指示時間の間、DMSO 0.1%または5mM AZ194と共にインキュベートした。図27左は、棒グラフが、3匹の別々のラットからの条件当たり少なくとも14細胞からの正規化されたピークナトリウム電流密度±s.e.m.を表すことを示している。*p<0.05、クラスカル・ウォリス検定。図27中央は、指示時間の間、DMSO 0.1%または5mM AZ194と共にインキュベートしたラット感覚ニューロンからのナトリウム電流の電流電圧の関係を示している。図27右側は、不活性化の生物物理学的特性が、対照に対し、いかなる時点においてもAZ194により改変されなかったことを示している。
本明細書で参照された特許文書及び科学論文の各々の開示内容全体が、あらゆる目的において、参照により組み入れられている。
本発明は、その趣旨または本質的特徴から逸脱することなく、他の具体的な形態で実施することができる。したがって、以上の実施形態は、あらゆる点において、本明細書に記載の本発明を限定するものではなく、例示的なものとしてみなすべきである。したがって、本発明の範囲は、以上の記載によってではなく、付属の特許請求の範囲によって示され、特許請求の範囲と均等の意味及び範囲内に収まる全ての変更は、本発明の範囲内に包含されることが意図されている。
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US62/506,298 | 2017-05-15 | ||
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JP2003512372A (ja) | 1999-10-18 | 2003-04-02 | スミスクライン ビーチャム パブリック リミテッド カンパニー | テトラヒドロベンゾインドロン誘導体、それらの製造および5−ht7受容体アンタゴニストとしてのそれらの使用 |
CN102627631A (zh) | 2012-03-31 | 2012-08-08 | 中国药科大学 | 苯并杂环类化合物、其制备方法及其医药用途 |
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US7205404B1 (en) | 1999-03-05 | 2007-04-17 | Metabasis Therapeutics, Inc. | Phosphorus-containing prodrugs |
EP2240464A4 (en) * | 2008-02-12 | 2011-09-14 | Yuhan Corp | PROCESS FOR THE PREPARATION OF 2-METHYL-2'-PHENYLPROPIONIC ACID DERIVATIVES AND NOVEL INTERMEDIATE COMPOUNDS |
EP3009427B1 (en) | 2011-03-03 | 2019-12-18 | Zalicus Pharmaceuticals Ltd. | Benzimidazole inhibitors of the sodium channel |
US9828348B2 (en) | 2013-11-08 | 2017-11-28 | Purdue Pharma L.P. | Benzimidazole derivatives and use thereof |
AU2015226911B2 (en) | 2014-03-07 | 2018-03-01 | The Arizona Board Of Regents On Behalf Of The University Of Arizona | Non-narcotic CRMP2 peptides targeting sodium channels for chronic pain |
JP2018052817A (ja) | 2015-01-21 | 2018-04-05 | 大日本住友製薬株式会社 | 新規ベンズイミダゾール誘導体およびその医薬用途 |
NZ742038A (en) * | 2015-10-07 | 2019-08-30 | Univ Arizona | Crmp2 sumoylation inhibitors and uses thereof |
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JP2003512372A (ja) | 1999-10-18 | 2003-04-02 | スミスクライン ビーチャム パブリック リミテッド カンパニー | テトラヒドロベンゾインドロン誘導体、それらの製造および5−ht7受容体アンタゴニストとしてのそれらの使用 |
CN102627631A (zh) | 2012-03-31 | 2012-08-08 | 中国药科大学 | 苯并杂环类化合物、其制备方法及其医药用途 |
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JP2020505434A (ja) | 2020-02-20 |
WO2018144900A1 (en) | 2018-08-09 |
US11208397B2 (en) | 2021-12-28 |
AU2018215466A1 (en) | 2019-08-22 |
CN110381941A (zh) | 2019-10-25 |
EP3576734A4 (en) | 2020-12-09 |
AU2018215466B2 (en) | 2022-03-10 |
US20200277271A1 (en) | 2020-09-03 |
EP3576734A1 (en) | 2019-12-11 |
CA3052195A1 (en) | 2018-08-09 |
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