JP6298404B2 - 膜貫通ポアを用いる二重鎖ポリヌクレオチド配列決定のためのヘアピンループ方法 - Google Patents
膜貫通ポアを用いる二重鎖ポリヌクレオチド配列決定のためのヘアピンループ方法 Download PDFInfo
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- JP6298404B2 JP6298404B2 JP2014522152A JP2014522152A JP6298404B2 JP 6298404 B2 JP6298404 B2 JP 6298404B2 JP 2014522152 A JP2014522152 A JP 2014522152A JP 2014522152 A JP2014522152 A JP 2014522152A JP 6298404 B2 JP6298404 B2 JP 6298404B2
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- polynucleotide
- target polynucleotide
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- stranded
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6811—Selection methods for production or design of target specific oligonucleotides or binding molecules
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N27/00—Investigating or analysing materials by the use of electric, electrochemical, or magnetic means
- G01N27/26—Investigating or analysing materials by the use of electric, electrochemical, or magnetic means by investigating electrochemical variables; by using electrolysis or electrophoresis
- G01N27/416—Systems
- G01N27/447—Systems using electrophoresis
- G01N27/44704—Details; Accessories
- G01N27/44717—Arrangements for investigating the separated zones, e.g. localising zones
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N27/00—Investigating or analysing materials by the use of electric, electrochemical, or magnetic means
- G01N27/26—Investigating or analysing materials by the use of electric, electrochemical, or magnetic means by investigating electrochemical variables; by using electrolysis or electrophoresis
- G01N27/416—Systems
- G01N27/447—Systems using electrophoresis
- G01N27/44756—Apparatus specially adapted therefor
- G01N27/44791—Microapparatus
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/483—Physical analysis of biological material
- G01N33/487—Physical analysis of biological material of liquid biological material
- G01N33/48707—Physical analysis of biological material of liquid biological material by electrical means
- G01N33/48721—Investigating individual macromolecules, e.g. by translocation through nanopores
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- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Organic Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Zoology (AREA)
- Engineering & Computer Science (AREA)
- Wood Science & Technology (AREA)
- Molecular Biology (AREA)
- General Health & Medical Sciences (AREA)
- Immunology (AREA)
- Biochemistry (AREA)
- Analytical Chemistry (AREA)
- Physics & Mathematics (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Microbiology (AREA)
- General Engineering & Computer Science (AREA)
- Biotechnology (AREA)
- Genetics & Genomics (AREA)
- Biophysics (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Electrochemistry (AREA)
- General Physics & Mathematics (AREA)
- Pathology (AREA)
- Dispersion Chemistry (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Apparatus Associated With Microorganisms And Enzymes (AREA)
- Investigating Or Analyzing Materials By The Use Of Electric Means (AREA)
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201161511436P | 2011-07-25 | 2011-07-25 | |
| US61/511,436 | 2011-07-25 | ||
| PCT/GB2012/051786 WO2013014451A1 (en) | 2011-07-25 | 2012-07-25 | Hairpin loop method for double strand polynucleotide sequencing using transmembrane pores |
Publications (3)
| Publication Number | Publication Date |
|---|---|
| JP2014531196A JP2014531196A (ja) | 2014-11-27 |
| JP2014531196A5 JP2014531196A5 (https=) | 2015-09-10 |
| JP6298404B2 true JP6298404B2 (ja) | 2018-03-20 |
Family
ID=46763140
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2014522152A Active JP6298404B2 (ja) | 2011-07-25 | 2012-07-25 | 膜貫通ポアを用いる二重鎖ポリヌクレオチド配列決定のためのヘアピンループ方法 |
Country Status (10)
| Country | Link |
|---|---|
| US (7) | US9957560B2 (https=) |
| EP (1) | EP2737084B1 (https=) |
| JP (1) | JP6298404B2 (https=) |
| KR (1) | KR20140050067A (https=) |
| CN (1) | CN103827320B (https=) |
| AU (1) | AU2012288629B2 (https=) |
| BR (1) | BR112014001699A2 (https=) |
| CA (1) | CA2843136C (https=) |
| IN (1) | IN2014DN00221A (https=) |
| WO (1) | WO2013014451A1 (https=) |
Families Citing this family (100)
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| CA3092369C (en) | 2008-09-22 | 2025-09-23 | University Of Washington | MSP NANOPORES AND ASSOCIATED PROCESSES |
| JP5843614B2 (ja) | 2009-01-30 | 2016-01-13 | オックスフォード ナノポア テクノロジーズ リミテッド | 膜貫通配列決定における核酸構築物のためのアダプター |
| SG10201604316WA (en) | 2011-05-27 | 2016-07-28 | Oxford Nanopore Tech Ltd | Coupling method |
| AU2012288629B2 (en) | 2011-07-25 | 2017-02-02 | Oxford Nanopore Technologies Limited | Hairpin loop method for double strand polynucleotide sequencing using transmembrane pores |
| EP3663412B1 (en) | 2011-09-23 | 2022-03-09 | Oxford Nanopore Technologies PLC | Analysis of a polymer comprising polymer units by means of translocation through a nanopore |
| JP6226869B2 (ja) | 2011-10-21 | 2017-11-08 | オックスフォード ナノポール テクノロジーズ リミテッド | 酵素法 |
| US9617591B2 (en) | 2011-12-29 | 2017-04-11 | Oxford Nanopore Technologies Ltd. | Method for characterising a polynucleotide by using a XPD helicase |
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| US9238836B2 (en) | 2012-03-30 | 2016-01-19 | Pacific Biosciences Of California, Inc. | Methods and compositions for sequencing modified nucleic acids |
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| KR102168813B1 (ko) * | 2013-03-08 | 2020-10-22 | 옥스포드 나노포어 테크놀로지즈 리미티드 | 효소 정지 방법 |
| GB201318465D0 (en) | 2013-10-18 | 2013-12-04 | Oxford Nanopore Tech Ltd | Method |
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| JP6749243B2 (ja) * | 2014-01-22 | 2020-09-02 | オックスフォード ナノポール テクノロジーズ リミテッド | 1つまたは複数のポリヌクレオチド結合タンパク質を標的ポリヌクレオチドに付着させる方法 |
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| GB201418159D0 (en) | 2014-10-14 | 2014-11-26 | Oxford Nanopore Tech Ltd | Method |
| WO2016138080A1 (en) | 2015-02-24 | 2016-09-01 | Trustees Of Boston University | Protection of barcodes during dna amplification using molecular hairpins |
| CN107208162B (zh) | 2015-02-26 | 2020-12-29 | 株式会社日立高新技术 | 核酸分子的构建方法 |
| GB201609220D0 (en) | 2016-05-25 | 2016-07-06 | Oxford Nanopore Tech Ltd | Method |
| CN107488656B (zh) | 2016-06-13 | 2020-07-17 | 陆欣华 | 一种核酸等温自扩增方法 |
| GB201807793D0 (en) | 2018-05-14 | 2018-06-27 | Oxford Nanopore Tech Ltd | Method |
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| US11168363B2 (en) | 2021-11-09 |
| US20150152492A1 (en) | 2015-06-04 |
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| US11261487B2 (en) | 2022-03-01 |
| US20160281159A1 (en) | 2016-09-29 |
| CA2843136C (en) | 2020-12-29 |
| AU2012288629A1 (en) | 2014-03-06 |
| US20200239950A1 (en) | 2020-07-30 |
| US9957560B2 (en) | 2018-05-01 |
| KR20140050067A (ko) | 2014-04-28 |
| US12168799B2 (en) | 2024-12-17 |
| CN103827320B (zh) | 2017-04-26 |
| BR112014001699A2 (pt) | 2017-06-13 |
| US20220127669A1 (en) | 2022-04-28 |
| US20160362739A1 (en) | 2016-12-15 |
| WO2013014451A1 (en) | 2013-01-31 |
| IN2014DN00221A (https=) | 2015-06-05 |
| CN103827320A (zh) | 2014-05-28 |
| EP2737084A1 (en) | 2014-06-04 |
| AU2012288629B2 (en) | 2017-02-02 |
| US20180291441A1 (en) | 2018-10-11 |
| US10597713B2 (en) | 2020-03-24 |
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