JP5817378B2 - マイクロアレイの解析方法および読取り装置 - Google Patents

マイクロアレイの解析方法および読取り装置 Download PDF

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Publication number
JP5817378B2
JP5817378B2 JP2011205865A JP2011205865A JP5817378B2 JP 5817378 B2 JP5817378 B2 JP 5817378B2 JP 2011205865 A JP2011205865 A JP 2011205865A JP 2011205865 A JP2011205865 A JP 2011205865A JP 5817378 B2 JP5817378 B2 JP 5817378B2
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Prior art keywords
microarray
image data
light
fluorescence
probe
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Japanese (ja)
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JP2012168159A (ja
JP2012168159A5 (enExample
Inventor
久美江 尾崎
久美江 尾崎
佐々本　裕方
裕方 佐々本
薙野　邦久
邦久 薙野
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Toray Industries Inc
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Toray Industries Inc
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Priority to JP2011205865A priority Critical patent/JP5817378B2/ja
Application filed by Toray Industries Inc filed Critical Toray Industries Inc
Priority to CA2825727A priority patent/CA2825727C/en
Priority to RU2013139860/28A priority patent/RU2013139860A/ru
Priority to US13/981,787 priority patent/US9719929B2/en
Priority to BR112013019162A priority patent/BR112013019162A2/pt
Priority to CN201180066561.6A priority patent/CN103339493B/zh
Priority to EP11857286.6A priority patent/EP2669662B1/en
Priority to PCT/JP2011/080007 priority patent/WO2012101943A1/ja
Priority to KR1020137019910A priority patent/KR101885939B1/ko
Publication of JP2012168159A publication Critical patent/JP2012168159A/ja
Publication of JP2012168159A5 publication Critical patent/JP2012168159A5/ja
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    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/30—Microarray design
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64—Fluorescence; Phosphorescence
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64—Fluorescence; Phosphorescence
    • G01N21/6486—Measuring fluorescence of biological material, e.g. DNA, RNA, cells
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12M—APPARATUS FOR ENZYMOLOGY OR MICROBIOLOGY; APPARATUS FOR CULTURING MICROORGANISMS FOR PRODUCING BIOMASS, FOR GROWING CELLS OR FOR OBTAINING FERMENTATION OR METABOLIC PRODUCTS, i.e. BIOREACTORS OR FERMENTERS
    • C12M1/00—Apparatus for enzymology or microbiology
    • C12M1/34—Measuring or testing with condition measuring or sensing means, e.g. colony counters
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64—Fluorescence; Phosphorescence
    • G01N21/645—Specially adapted constructive features of fluorimeters
    • G01N21/6452—Individual samples arranged in a regular 2D-array, e.g. multiwell plates
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/543—Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals
    • G01N33/54366—Apparatus specially adapted for solid-phase testing
    • G01N33/54373—Apparatus specially adapted for solid-phase testing involving physiochemical end-point determination, e.g. wave-guides, FETS, gratings
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/58—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving labelled substances
    • G01N33/582—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving labelled substances with fluorescent label
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N37/00—Details not covered by any other group of this subclass
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
    • B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
    • B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
    • B01J2219/00277—Apparatus
    • B01J2219/00497—Features relating to the solid phase supports
    • B01J2219/00527—Sheets
    • B01J2219/00529—DNA chips
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
    • B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
    • B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
    • B01J2219/00277—Apparatus
    • B01J2219/0054—Means for coding or tagging the apparatus or the reagents
    • B01J2219/00572—Chemical means
    • B01J2219/00576—Chemical means fluorophore
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
    • B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
    • B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
    • B01J2219/0068—Means for controlling the apparatus of the process
    • B01J2219/00693—Means for quality control
    • C—CHEMISTRY; METALLURGY
    • C40—COMBINATORIAL TECHNOLOGY
    • C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B60/00—Apparatus specially adapted for use in combinatorial chemistry or with libraries
    • C40B60/12—Apparatus specially adapted for use in combinatorial chemistry or with libraries for screening libraries
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64—Fluorescence; Phosphorescence
    • G01N21/645—Specially adapted constructive features of fluorimeters
    • G01N21/6456—Spatial resolved fluorescence measurements; Imaging

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  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Immunology (AREA)
  • Chemical & Material Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Biomedical Technology (AREA)
  • Biochemistry (AREA)
  • Analytical Chemistry (AREA)
  • Biotechnology (AREA)
  • General Physics & Mathematics (AREA)
  • Pathology (AREA)
  • Urology & Nephrology (AREA)
  • Hematology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Microbiology (AREA)
  • Medicinal Chemistry (AREA)
  • Food Science & Technology (AREA)
  • Cell Biology (AREA)
  • Genetics & Genomics (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Evolutionary Biology (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Organic Chemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Sustainable Development (AREA)
  • Investigating, Analyzing Materials By Fluorescence Or Luminescence (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
JP2011205865A 2011-01-28 2011-09-21 マイクロアレイの解析方法および読取り装置 Active JP5817378B2 (ja)

Priority Applications (9)

Application Number Priority Date Filing Date Title
JP2011205865A JP5817378B2 (ja) 2011-01-28 2011-09-21 マイクロアレイの解析方法および読取り装置
KR1020137019910A KR101885939B1 (ko) 2011-01-28 2011-12-26 마이크로어레이의 해석 방법 및 판독 장치
US13/981,787 US9719929B2 (en) 2011-01-28 2011-12-26 Microarray analysis method and microarray reading device
BR112013019162A BR112013019162A2 (pt) 2011-01-28 2011-12-26 método de análise e dispositivo de leitura de microarranjo
CN201180066561.6A CN103339493B (zh) 2011-01-28 2011-12-26 微阵列的分析方法及读取装置
EP11857286.6A EP2669662B1 (en) 2011-01-28 2011-12-26 Analysis method and reading device for microarray
CA2825727A CA2825727C (en) 2011-01-28 2011-12-26 Microarray analysis method and microarray reading device
RU2013139860/28A RU2013139860A (ru) 2011-01-28 2011-12-26 Способ анализа микрочипа и устройство считывания микрочипа
PCT/JP2011/080007 WO2012101943A1 (ja) 2011-01-28 2011-12-26 マイクロアレイの解析方法および読取り装置

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
JP2011016690 2011-01-28
JP2011016690 2011-01-28
JP2011205865A JP5817378B2 (ja) 2011-01-28 2011-09-21 マイクロアレイの解析方法および読取り装置

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JP2012168159A JP2012168159A (ja) 2012-09-06
JP2012168159A5 JP2012168159A5 (enExample) 2014-11-06
JP5817378B2 true JP5817378B2 (ja) 2015-11-18

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US (1) US9719929B2 (enExample)
EP (1) EP2669662B1 (enExample)
JP (1) JP5817378B2 (enExample)
KR (1) KR101885939B1 (enExample)
CN (1) CN103339493B (enExample)
BR (1) BR112013019162A2 (enExample)
CA (1) CA2825727C (enExample)
RU (1) RU2013139860A (enExample)
WO (1) WO2012101943A1 (enExample)

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WO2014057893A1 (ja) * 2012-10-12 2014-04-17 東レ株式会社 検出方法、マイクロアレイの解析方法および蛍光読取装置
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KR101594523B1 (ko) * 2013-09-02 2016-02-16 한국광기술원 가시광 광학영상 및 비가시광 형광영상의 동시구현이 가능한 광대역 영상 획득투사장치
JP2015194379A (ja) * 2014-03-31 2015-11-05 株式会社ニコン バイオチップ及びバイオチップにおけるアライメントマークの検出方法
JP6448933B2 (ja) * 2014-07-09 2019-01-09 日本板硝子株式会社 蛍光検出用光学装置
JP6534318B2 (ja) * 2015-09-02 2019-06-26 アズビル株式会社 蛍光粒子の計測方法
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CN109003910B (zh) * 2018-06-06 2020-07-14 广东利扬芯片测试股份有限公司 基于全自动探针台的不规则晶圆测试方法及其计算机可读存储介质
JP7141102B2 (ja) * 2018-11-26 2022-09-22 株式会社マルコム Ｌｅｄ装置の発光特性測定装置
JP6664462B2 (ja) * 2018-12-05 2020-03-13 日本板硝子株式会社 蛍光検出用光学装置
CN113227342A (zh) * 2019-01-09 2021-08-06 株式会社日立高新技术 核酸分析用基板、核酸分析用流动池以及图像分析方法
JP2020106535A (ja) * 2020-02-18 2020-07-09 日本板硝子株式会社 蛍光検出用光学装置
CN117529649A (zh) * 2021-06-18 2024-02-06 浜松光子学株式会社 测量装置
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CN117351077B (zh) * 2023-09-14 2024-07-02 广东凯普科技智造有限公司 一种点样仪动态预测的视觉修正方法

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Also Published As

Publication number Publication date
WO2012101943A1 (ja) 2012-08-02
JP2012168159A (ja) 2012-09-06
CA2825727A1 (en) 2012-08-02
BR112013019162A2 (pt) 2018-06-05
CN103339493A (zh) 2013-10-02
RU2013139860A (ru) 2015-03-10
EP2669662A4 (en) 2017-12-27
US20130303403A1 (en) 2013-11-14
US9719929B2 (en) 2017-08-01
EP2669662A1 (en) 2013-12-04
CA2825727C (en) 2019-03-19
EP2669662B1 (en) 2019-02-20
KR20130142179A (ko) 2013-12-27
CN103339493B (zh) 2015-06-10
KR101885939B1 (ko) 2018-08-06

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