JP2022547707A - Sarm1の阻害剤 - Google Patents
Sarm1の阻害剤 Download PDFInfo
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- JP2022547707A JP2022547707A JP2022516240A JP2022516240A JP2022547707A JP 2022547707 A JP2022547707 A JP 2022547707A JP 2022516240 A JP2022516240 A JP 2022516240A JP 2022516240 A JP2022516240 A JP 2022516240A JP 2022547707 A JP2022547707 A JP 2022547707A
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- compound
- optionally substituted
- nitrogen
- aliphatic
- sulfur
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- C07D401/00—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom
- C07D401/02—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings
- C07D401/04—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings directly linked by a ring-member-to-ring-member bond
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- C07D413/00—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms
- C07D413/02—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing two hetero rings
- C07D413/04—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing two hetero rings directly linked by a ring-member-to-ring-member bond
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- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D215/00—Heterocyclic compounds containing quinoline or hydrogenated quinoline ring systems
- C07D215/02—Heterocyclic compounds containing quinoline or hydrogenated quinoline ring systems having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen atoms or carbon atoms directly attached to the ring nitrogen atom
- C07D215/16—Heterocyclic compounds containing quinoline or hydrogenated quinoline ring systems having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen atoms or carbon atoms directly attached to the ring nitrogen atom with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
- C07D215/48—Carbon atoms having three bonds to hetero atoms with at the most one bond to halogen
- C07D215/50—Carbon atoms having three bonds to hetero atoms with at the most one bond to halogen attached in position 4
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- C07D401/14—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing three or more hetero rings
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- C07D405/00—Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom
- C07D405/02—Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom containing two hetero rings
- C07D405/12—Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom containing two hetero rings linked by a chain containing hetero atoms as chain links
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- C07D413/00—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms
- C07D413/02—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing two hetero rings
- C07D413/12—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing two hetero rings linked by a chain containing hetero atoms as chain links
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- C07D417/02—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00 containing two hetero rings
- C07D417/12—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00 containing two hetero rings linked by a chain containing hetero atoms as chain links
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- C07D471/02—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed system contains two hetero rings
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- C07D491/02—Heterocyclic compounds containing in the condensed ring system both one or more rings having oxygen atoms as the only ring hetero atoms and one or more rings having nitrogen atoms as the only ring hetero atoms, not provided for by groups C07D451/00 - C07D459/00, C07D463/00, C07D477/00 or C07D489/00 in which the condensed system contains two hetero rings
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Abstract
Description
本出願は、2019年9月12日に出願された、米国仮特許出願第62/899,444号の利益を主張し、その全体が参照により本明細書に組み込まれる。
本出願は、ASCIIフォーマットで電子的に提出された配列表を含んでおり、その全体が参照により本明細書に組み込まれる。2020年9月9日に作成されたASCIIコピーは、2012800-0041_SL.txtという名前であり、サイズは8,858バイトである。
Xが、NまたはC-Rxであり、
Rxが、水素、ハロゲン、および任意選択的に置換されたC1-6脂肪族からなる群から選択され、
Raが、水素、ハロゲン、CN、CF3、C1-3脂肪族、および-C(O)N(Ra*)2からなる群から選択され、
Ra*が、水素およびC1-3脂肪族から選択され、
R1が、水素;ハロゲン;N(R)2;OR;C1-6脂肪族;窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する3~7員の単環式複素環;窒素、酸素、および硫黄から独立して選択される1~3個のヘテロ原子を有する5~6員のヘテロアリール環;ならびに窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する7~8員の架橋二環式複素環からなる群から選択され、C1-6脂肪族、単環式または架橋二環式複素環、およびヘテロアリール環の各々が、1~3個のR1*基で任意選択的に置換されており、
R1*が、オキソ、ハロゲン、N(R)2、OR、C(O)R、S(O)2R、C(O)OR、C(O)N(R)2、任意選択的に置換されたC1-6脂肪族、ならびに窒素、酸素、および硫黄から独立して選択される1~3個のヘテロ原子を有する任意選択的に置換された5~6員のヘテロアリール環から選択され、
Rが、水素、任意選択的に置換されたC1-6脂肪族、ならびに窒素、酸素、および硫黄から独立して選択される0~2個のヘテロ原子を有する任意選択的に置換された3~7員の飽和単環式環からなる群から選択されるか、または:
2つのR基が、それらが結合している窒素原子と一緒になって、窒素、酸素、または硫黄から選択される0~1個の追加のヘテロ原子を含む任意選択的に置換された3~6員の複素環を形成し、
R2が、水素、ハロゲン、S(O)2R、C(O)OR、C(O)N(R)2、ならびに任意選択的に置換されている基であって、C1~6脂肪族;窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する3~7員の複素環;ならびに窒素、酸素、および硫黄から独立して選択される1~3個のヘテロ原子を有する5~6員のヘテロアリール環から選択される、任意選択的に置換されている基、からなる群から選択され、
R3が、水素、ハロゲン、CN、CF3、C1-3脂肪族、および-C(O)N(Ra*)2からなる群から選択される、化合物、またはその医薬的に許容される塩を提供する。
脂肪族:「脂肪族」という用語は、完全に飽和しているか、もしくは1つ以上の不飽和の単位を含有する、直鎖(すなわち、非分岐)もしくは分岐、置換もしくは非置換の炭化水素鎖、または完全に飽和しているか、もしくは1つ以上の不飽和の単位を含有するが、芳香族ではなく(本明細書において「「炭化水素」または「脂環式」」とも呼ばれる)、分子の残りの部分への単一の結合点を有する、単環式炭化水素または二環式炭化水素を指す。特に明記しない限り、脂肪族基は、1~6個の脂肪族炭素原子を含有する。いくつかの実施形態において、脂肪族基は、1~5個の脂肪族炭素原子を含有する。他の実施形態において、脂肪族基は、1~4個の脂肪族炭素原子を含有する。さらに他の実施形態において、脂肪族基は、1~3個の脂肪族炭素原子を含有し、さらに他の実施形態において、脂肪族基は、1~2個の脂肪族炭素原子を含有する。いくつかの実施形態において、「脂環式」(または「炭素環」)は、完全に飽和しているか、または1つ以上の不飽和の単位を含有するが、芳香族ではなく、分子の残りの部分への単一の結合点を有する、単環式C3~C8炭化水素または二環式C7~C10炭化水素を指す。好適な脂肪族基は、直鎖または分岐鎖、置換または非置換のアルキル、アルケニル、アルキニル基、およびそれらのハイブリッドが含まれるが、これらに限定されない。
軸索変性は、限定されないが、アルツハイマー病、パーキンソン病、ALS、多発性硬化症、糖尿病性末梢神経障害、化学療法誘発性末梢神経障害、遺伝性神経障害、外傷性脳損傷、および/または緑内障などの神経疾患の主要な病理学的特性である。損傷した軸索または不健康な軸索は、ウォーラー変性として知られるアポトーシスのような従来の細胞死経路とは異なる固有の自己破壊プログラムによって排除される。(Gerdts,J.,et al.,Neuron,2016,89,449-460;Whitmore,A.V.et al.,Cell Death Differ.,2003,10,260-261)。ウォーラー変性の際、末梢神経は損傷の遠位にある軸索セグメントの選択的分解を受けるが、一方、近位軸索セグメントおよび細胞体は無傷のままである。理論に縛られることを望まないが、ウォーラー変性は、最初にニコチンアミドモノヌクレオチドアデニルトランスフェラーゼ(NMNAT)の枯渇、続いてニコチンアミドアデニンジヌクレオチド(NAD+)の喪失、アデノシン三リン酸(ATP)の喪失、ニューロフィラメントタンパク質分解、および最後に損傷の約8~24時間後で軸索分解を特徴とする。(Gerdts,J.,et al.,Neuron,2016,89,449-460)。
いくつかの実施形態において、本開示は、式Iの化合物であって、
Xが、NまたはC-Rxであり、
Rxが、水素、ハロゲン、および任意選択的に置換されたC1-6脂肪族からなる群から選択され、
Raが、水素、ハロゲン、CN、CF3、C1-3脂肪族、および-C(O)N(Ra*)2からなる群から選択され、
Ra*が、水素およびC1-3脂肪族から選択され、
R1が、水素;ハロゲン;N(R)2;OR;C1-6脂肪族;窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する3~7員の単環式複素環;窒素、酸素、および硫黄から独立して選択される1~3個のヘテロ原子を有する5~6員のヘテロアリール環;ならびに窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する7~8員の架橋二環式複素環からなる群から選択され、C1-6脂肪族、単環式または架橋二環式複素環、およびヘテロアリール環の各々が、1~3個のR1*基で任意選択的に置換されており、
R1*が、オキソ、ハロゲン、N(R)2、OR、C(O)R、S(O)2R、C(O)OR、C(O)N(R)2、任意選択的に置換されたC1-6脂肪族、ならびに窒素、酸素、および硫黄から独立して選択される1~3個のヘテロ原子を有する任意選択的に置換された5~6員のヘテロアリール環から選択され、
Rが、水素、任意選択的に置換されたC1-6脂肪族、ならびに窒素、酸素、および硫黄から独立して選択される0~2個のヘテロ原子を有する任意選択的に置換された3~7員の飽和単環式環からなる群から選択されるか、または:
2つのR基が、それらが結合している窒素原子と一緒になって、窒素、酸素、または硫黄から選択される0~1個の追加のヘテロ原子を含む任意選択的に置換された3~6員の複素環を形成し、
R2が、水素、ハロゲン、S(O)2R、C(O)OR、C(O)N(R)2、ならびに任意選択的に置換されている基であって、C1~6脂肪族;窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する3~7員の複素環;ならびに窒素、酸素、および硫黄から独立して選択される1~3個のヘテロ原子を有する5~6員のヘテロアリール環から選択される、任意選択的に置換されている基、からなる群から選択され、
R3が、水素、ハロゲン、CN、CF3、C1-3脂肪族、および-C(O)N(Ra*)2からなる群から選択される、化合物、またはその医薬的に許容される塩を提供する。
Xが、NまたはC-Rxであり、
Rxが、水素、ハロゲン、および任意選択的に置換されたC1-6脂肪族からなる群から選択され、
R1が、窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する3~7員の単環式複素環;窒素、酸素、および硫黄から独立して選択される1~3個のヘテロ原子を有する5~6員のヘテロアリール環;ならびに窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する7~8員の架橋二環式複素環からなる群から選択され、C1-6脂肪族、単環式または架橋二環式複素環、およびヘテロアリール環の各々が、1~3個のR1*基で任意選択的に置換されており、
R1*が、オキソ、ハロゲン、N(R)2、OR、C(O)R、S(O)2R、C(O)OR、C(O)N(R)2、およびC1-6脂肪族から選択され、
Rが、水素および任意選択的に置換されたC1-6脂肪族からなる群から選択されるか、または:
2つのR基が、それらが結合している窒素原子と一緒になって、窒素、酸素、または硫黄から選択される0~1個の追加のヘテロ原子を含む任意選択的に置換された3~6員の複素環を形成し、
R2が、水素、ハロゲン、S(O)2R、C(O)OR、C(O)N(R)2、ならびに任意選択的に置換されている基であって、C1~6脂肪族;窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する3~7員の複素環;ならびに窒素、酸素、および硫黄から独立して選択される1~3個のヘテロ原子を有する5~6員のヘテロアリール環から選択される、任意選択的に置換されている基、からなる群から選択され、
R3が、水素、ハロゲン、CN、CF3、C1-3脂肪族、および-C(O)N(Ra*)2からなる群から選択される、化合物、またはその医薬的に許容される塩を提供する。
実施形態1.式Iの化合物であって、
Xが、NまたはC-Rxであり、
Rxが、水素、ハロゲン、および任意選択的に置換されたC1-6脂肪族からなる群から選択され、
Raが、水素、ハロゲン、CN、CF3、C1-3脂肪族、および-C(O)N(Ra*)2からなる群から選択され、
Ra*が、水素およびC1-3脂肪族から選択され、
R1が、水素;ハロゲン;N(R)2;OR;C1-6脂肪族;窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する3~7員の単環式複素環;窒素、酸素、および硫黄から独立して選択される1~3個のヘテロ原子を有する5~6員のヘテロアリール環;ならびに窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する7~8員の架橋二環式複素環からなる群から選択され、C1-6脂肪族、単環式または架橋二環式複素環、およびヘテロアリール環の各々が、1~3個のR1*基で任意選択的に置換されており、
R1*が、オキソ、ハロゲン、N(R)2、OR、C(O)R、S(O)2R、C(O)OR、C(O)N(R)2、任意選択的に置換されたC1-6脂肪族、ならびに窒素、酸素、および硫黄から独立して選択される1~3個のヘテロ原子を有する任意選択的に置換された5~6員のヘテロアリール環から選択され、
Rが、水素、任意選択的に置換されたC1-6脂肪族、ならびに窒素、酸素、および硫黄から独立して選択される0~2個のヘテロ原子を有する任意選択的に置換された3~7員の飽和単環式環からなる群から選択されるか、または:
2つのR基が、それらが結合している窒素原子と一緒になって、窒素、酸素、または硫黄から選択される0~1個の追加のヘテロ原子を含む任意選択的に置換された3~6員の複素環を形成し、
R2が、水素、ハロゲン、S(O)2R、C(O)OR、C(O)N(R)2、ならびに任意選択的に置換されている基であって、C1~6脂肪族;窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する3~7員の複素環;ならびに窒素、酸素、および硫黄から独立して選択される1~3個のヘテロ原子を有する5~6員のヘテロアリール環から選択される、任意選択的に置換されている基、からなる群から選択され、
R3が、水素、ハロゲン、CN、CF3、C1-3脂肪族、および-C(O)N(Ra*)2からなる群から選択される、化合物、またはその医薬的に許容される塩。
Xが、NまたはC-Rxであり、
Rxが、水素、ハロゲン、および任意選択的に置換されたC1-6脂肪族からなる群から選択され、
R1が、窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する3~7員の単環式複素環;窒素、酸素、および硫黄から独立して選択される1~3個のヘテロ原子を有する5~6員のヘテロアリール環;ならびに窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する7~8員の架橋二環式複素環からなる群から選択され、C1-6脂肪族、単環式または架橋二環式複素環、およびヘテロアリール環の各々が、1~3個のR1*基で任意選択的に置換されており、
R1*が、オキソ、ハロゲン、N(R)2、OR、C(O)R、S(O)2R、C(O)OR、C(O)N(R)2、およびC1-6脂肪族から選択され、
Rが、水素および任意選択的に置換されたC1-6脂肪族からなる群から選択されるか、または:
2つのR基が、それらが結合している窒素原子と一緒になって、窒素、酸素、または硫黄から選択される0~1個の追加のヘテロ原子を含む任意選択的に置換された3~6員の複素環を形成し、
R2が、水素、ハロゲン、S(O)2R、C(O)OR、C(O)N(R)2、ならびに任意選択的に置換されている基であって、C1~6脂肪族;窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する3~7員の複素環;ならびに窒素、酸素、および硫黄から独立して選択される1~3個のヘテロ原子を有する5~6員のヘテロアリール環から選択される、任意選択的に置換されている基、からなる群から選択され、
R3が、水素、ハロゲン、CN、CF3、C1-3脂肪族、および-C(O)N(Ra*)2からなる群から選択される、化合物、またはその医薬的に許容される塩である、実施形態1に記載の化合物。
いくつかの実施形態において、式Iまたは式IIの化合物は、組成物において、例えば、1つ以上の他の成分との組み合わせ(例えば、混合物)で提供され得る。
とりわけ、本開示は、本明細書に記載される化合物および/または組成物の同定および/または特性評価のための様々な技術を提供する。例えば、本開示は、SARM1阻害活性を評価するための、特に、SARM1阻害活性を評価するための様々なアッセイを提供する。
いくつかの実施形態において、SARM1阻害剤を同定する方法は、a)i)SARM1の変異体またはフラグメント、ii)NAD+、およびiii)候補阻害剤を含む混合物を提供することであって、変異体またはフラグメントは、構成的活性を有する、提供することと、b)混合物をインキュベートすることと、c)インキュベーション後の混合物中のNAD+を定量化することと、d)NAD+の量が、候補阻害剤を含有しない対照混合物の量よりも多い場合、候補阻害剤化合物を阻害剤として同定することと、を含む。
いくつかの実施形態において、提供されるSARM1阻害剤の有効性は、例えば、2018年3月29日に公開されたWO2018/057989に記載されたアッセイに従って決定することができ、参照によりその全体が本明細書に組み込まれる。いくつかの実施形態において、提供されるSARM1阻害剤は、SARM1またはそのフラグメントを含有する溶液に適用することができる。いくつかの実施形態において、提供されるSARM1阻害剤は、インビトロシステムに適用することができる。いくつかの実施形態において、提供されるSARM1阻害剤は、インビボで適用することができる。いくつかの実施形態において、提供されるSARM1阻害剤は、患者に適用することができる。いくつかの実施形態において、SARM1阻害剤は、エピトープタグで標識されたSARM1またはそのフラグメントと混合することができる。いくつかの実施形態において、結合されたSARM1阻害剤の量は、結合されていないSARM1阻害剤の量と比較され得、SARM1阻害剤に対する親和性をもたらす。
いくつかの実施形態において、SARM1-TIRドメインは、例えば、精製において有用であり得る様々なタンパク質またはエピトープ、タグで操作することができる。いくつかの実施形態において、本開示はまた、ニコチンアミドリボシドキナーゼ1(NRK1)で形質転換されたHEK293T細胞を含むNRK1-HEK293T細胞株を提供する。いくつかの実施形態において、HEK293T細胞は、ニコチンアミドリボシドキナーゼ1(NRK1)をコードするDNA配列で形質転換またはトランスフェクトされた。いくつかの実施形態において、NRK1をコードするDNAは、ゲノムまたはcDNAであり得る。いくつかの実施形態において、HEK293T細胞は、宿主細胞に対して外因性の供給源からNRK1をコードするDNAで安定的または一時的にトランスフェクトされる。いくつかの実施形態において、HEK293T細胞は、細胞が対照細胞と比較して高いレベルでNRK1を発現するように、NRK1をコードするDNAで安定的または一時的にトランスフェクトされる。いくつかの実施形態において、NRK1をコードするDNAは、プロモーター、エンハンサー、またはそれらの組み合わせなどの1つ以上の外因性調節DNA配列の制御下にある。いくつかの実施形態において、NRK1をコードするDNA配列と調節配列との組み合わせは、天然に存在しない組み合わせである。いくつかの実施形態において、NRK1をコードするDNAは、ゲノムまたはcDNAのいずれかであり、FCIV発現ベクターなどの発現ベクターを含む。いくつかの実施形態において、NRK1をコードするDNAは、脊椎動物または無脊椎動物種、例えば、これらに限定されないが、ヒト、マウス、ゼブラフィッシュ、またはショウジョウバエからのゲノムDNAまたはcDNAに由来する。いくつかの構成において、NRK1 DNAは、ヒトNRK1 DNAである。
本開示は、例えば、本明細書に記載されるそれらの活性および/または特徴の見地から、本明細書に記載される化合物および/または組成物の様々な使用および用途を提供する。いくつかの実施形態において、かかる使用は、治療的および/または診断的使用を含み得る。代替的に、いくつかの実施形態において、かかる使用は、研究、生産、および/または他の技術的使用を含み得る。
いくつかの実施形態において、本明細書に記載される化合物および/または組成物は、1つ以上の疾患、障害、または状態に罹患している対象に投与することができる。
いくつかの実施形態において、本明細書に記載される化合物および/または組成物は、本明細書に記載の疾患、障害もしくは状態に罹患している、または罹患しやすい対象に投与される。いくつかの実施形態において、かかる疾患、障害、または状態は、本明細書で言及される状態の1つなどの軸索変性を特徴とする。
当業者は、いくつかの実施形態において、本明細書に記載されるような医薬組成物もしくはレジメンの投与に含まれるおよび/または投与によって送達される特定の化合物の正確な量が、医師によって選択され得、例えば、対象の1つ以上の種、年齢、および一般的な状態、および/または特定の化合物もしくは組成物の同一性、その投与方法などを考慮して、異なる対象に対して異なっていてもよいことを理解するであろう。代替的に、いくつかの実施形態において、本明細書に記載されるような医薬組成物またはレジメンの投与に含まれるおよび/または投与される特定の化合物の量は、関連する患者集団(例えば、すべての患者、特定の年齢もしくは疾患のすべての患者、または特定のバイオマーカーを発現しているすべての患者など)にわたって標準化され得る。
一般的な合成方法
本発明による化合物およびそれらの中間体は、当業者に知られており、有機合成の文献に記載されている合成方法を使用して得られ得る。好ましくは、化合物は、特に実験のセクションに記載されるように、以下により完全に説明される調製方法に類似した方法で得られる。場合によっては、反応ステップを実行する順序は、変更され得る。当業者には知られているが、ここでは詳細に説明されていない反応方法の変種も使用され得る。
a)Waters Xbridge C18 10μm 30×100mmカラム
b)Waters Sunfire C18 10μm 30×100mmカラム
c)Waters Xbridge C18 3.5μm 50×4.6mmカラム
d)HALO C18 2.7μm 30×4.6mmカラム
e)Waters Sunfire C18 3.5μm 50×4.6mmカラム
分析LC/MS分析方法A:
ESI+/-イオンモード100-1000Da
カラム:XBridge SB-C18、3.5μm 4.6 x50mmカラム
温度:40℃
勾配:
ESI+/-イオンモード100-1000Da
カラム:Sunfire C18、3.5μm 4.6 x50mmカラム
温度:50℃
勾配:
ESI+/-イオンモード100-1000Da
カラム:XBridge SB-C18、3.5μm 4.6 x50mmカラム
温度:40℃
勾配:
ESI+/-イオンモード100-1000Da
カラム:XBridge SB-C18、3.5μm 4.6 x50mmカラム
温度:40℃
勾配:
ESI+/-イオンモード100-1000Da
カラム:XBridge C18、3.5μm 4.6 x50mmカラム
温度:40℃
勾配:
ESI+/-イオンモード100-1000Da
カラム:XBridge C18、3.5μm 4.6 x50mmカラム
温度:50℃
勾配:
ESI+/-イオンモード100-1000Da
カラム:XBridge C18、3.5μm 4.6 x50mmカラム
温度:45℃
勾配:
ESI+/-イオンモード100-1000Da
カラム:XBridge C18、3.5μm 4.6 x50mmカラム
温度:50℃
勾配:
ESI+/-イオンモード100-1000Da
カラム:XBridge C18、3.5μm 4.6 x50mmカラム
温度:45℃
勾配:
ESI+/-イオンモード100-1000Da
カラム:Phenomenex Kinetix-XB C18、1.7μm 2.1 x100mmカラム
温度:40℃
勾配:
合成例A:実施例76の合成
ステップ1
DMF(4mL)中のR-1(220mg、1.0mmol)の溶液に、R-8(210mg、1.2mmol)およびK2CO3(691mg、5.0mmol)を加え、80℃で2時間撹拌する。混合物をH2O(50mL)で処理し、EtOAc(50mL×3)で抽出する。合わせた有機層をブライン(30mL)で洗浄し、Na2SO4で乾燥させ、濾過し、濃縮する。残留物をフラッシュクロマトグラフィー(EtOAc:石油エーテル=1:1)によって精製して、I-3(310mg、95%)を得る[分析方法I、保持時間(ret time)=2.16分、m/z=330.1]。
この実施例は、ARM-SAM-TIR NADアーゼ活性のアッセイ、およびSARM1媒介NAD+切断をブロックするための式Iまたは式IIの化合物の有効性を測定するためのこのアッセイの使用を説明する。このアッセイは、SARM1活性を阻害する式Iまたは式IIの化合物の有効性を特徴付け、各化合物のIC50値を計算するように最適化されている。このアッセイは、ARM、SAM、およびTIRドメインを含む全長のSARM1を使用する。本明細書に示されるように、自己阻害性N-末端ドメインなしでのこのフラグメントの発現は、NAD+を切断する構成的に活性な酵素を生成する。
NRK1-HEK293T細胞を、150cm2のプレート上に20×106細胞/プレートで播種した。翌日、細胞を15μgのARM-SAM-TIR発現プラスミド、配列番号1でトランスフェクトした。
GCGATCGCGGCTCCCGACATCTTGGACCATTAGCTCCACAGGTATCTTCTTCCCTCTAGTGGTCATAACAGCAGCTTCAG
CTACCTCTCAATTCAAAAAACCCCTCAAGACCCGTTTAGAGGCCCCAAGGGGTTATGCTATCAATCGTTGCGTTACACAC
ACAAAAAACCAACACACATCCATCTTCGATGGATAGCGATTTTATTATCTAACTGCTGATCGAGTGTAGCCAGATCTAGT
AATCAATTACGGGGTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCCGCCTGGC
TGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCATAGTAACGCCAATAGGGACTTTCCATTG
ACGTCAATGGGTGGAGTATTTACGGTAAACTGCCCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTACGCCCCCTA
TTGACGTCAATGACGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTATGGGACTTTCCTACTTGGCAGTAC
ATCTACGTATTAGTCATCGCTATTACCATGCTGATGCGGTTTTGGCAGTACATCAATGGGCGTGGATAGCGGTTTGACTC
ACGGGGATTTCCAAGTCTCCACCCCATTGACGTCAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAAT
GTCGTAACAACTCCGCCCCATTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGCTGGTTTA
GTGAACCGTCAGATCAGATCTTTGTCGATCCTACCATCCACTCGACACACCCGCCAGCGGCCGCTGCCAAGCTTCCGAGC
TCTCGAATTCAAAGGAGGTACCCACcatgGCCATGCATCACCACCACCATCATAGCTCCGGCGTCGACCTCGGCACCGAG
AATTTATATTTCCAAAGCGGCCTCAATGATATCTTCGAGGCCCAGAAGATCGAGTGGCACGAGGGCAGCTCCGACCTCGC
CGTGCCCGGTCCCGATGGAGGCGGAGGCACTGGTCCTTGGTGGGCTGCTGGCGGCAGAGGCCCTAGAGAAGTGAGCCCCG
GTGCTGGCACCGAGGTGCAAGACGCTCTGGAGAGGGCTCTGCCCGAACTGCAGCAAGCTCTGTCCGCTTTAAAGCAAGCT
GGAGGAGCTAGAGCCGTCGGCGCCGGACTGGCCGAAGTGTTCCAGCTCGTGGAGGAAGCTTGGTTATTACCCGCTGTGGG
AAGAGAGGTCGCCCAAGGTCTGTGTGACGCCATTCGTCTGGACGGAGGTTTAGACTTATTACTGAGGCTGCTGCAAGCTC
CCGAACTGGAGACAAGGGTCCAAGCTGCTCGTCTGCTGGAGCAGATCCTCGTGGCCGAGAATCGTGACAGAGTGGCTAGA
ATCGGTTTAGGCGTCATCCTCAATTTAGCCAAAGAGAGGGAGCCCGTTGAGCTGGCCAGAAGCGTCGCTGGCATCCTCGA
GCACATGTTCAAGCATTCCGAGGAGACTTGTCAGAGACTGGTCGCCGCCGGAGGACTCGATGCTGTTTTATACTGGTGCA
GAAGGACAGACCCCGCTTTACTGAGGCATTGTGCTCTGGCCCTCGGCAATTGCGCTTTACATGGAGGCCAAGCCGTCCAG
AGAAGGATGGTGGAGAAAAGAGCCGCCGAGTGGCTGTTCCCTTTAGCCTTCTCCAAAGAAGACGAACTGTTACGTCTGCA
TGCTTGTCTCGCTGTCGCTGTTTTAGCCACCAACAAGGAGGTGGAAAGGGAAGTGGAAAGAAGCGGAACACTGGCTTTAG
TCGAACCTCTGGTGGCTTCTTTAGATCCCGGAAGGTTTGCCAGATGTCTGGTCGACGCCAGCGATACCTCCCAAGGAAGA
GGCCCCGACGATCTCCAGAGACTGGTGCCTCTGCTGGACAGCAATCGTCTGGAGGCCCAATGTATTGGCGCCTTCTATCT
CTGCGCCGAAGCCGCCATCAAGTCTTTACAAGGTAAGACCAAGGTGTTCTCCGACATTGGAGCCATCCAATCTTTAAAGA
GGCTGGTGAGCTATTCCACCAACGGCACAAAAAGCGCTTTAGCCAAAAGAGCTTTAAGACTGCTGGGCGAAGAGGTGCCT
AGGCCCATTTTACCTTCCGTGCCTAGCTGGAAGGAGGCCGAGGTGCAGACTTGGCTGCAGCAGATCGGCTTTAGCAAATA
TTGCGAATCCTTTAGGGAGCAGCAAGTTGACGGCGATTTATTATTAAGGCTGACCGAGGAAGAGCTCCAGACAGATTTAG
GCATGAAAAGCGGCATCACTCGTAAGAGGTTCTTTCGTGAGCTCACCGAACTGAAGACCTTCGCCAACTACTCCACTTGT
GATCGTAGCAATTTAGCTGATTGGCTCGGATCCCTCGATCCCAGATTTCGTCAGTACACCTATGGACTCGTCTCTTGTGG
ACTGGACAGATCTTTACTGCATCGTGTGAGCGAGCAACAGCTGCTGGAAGATTGCGGCATCCATTTAGGAGTGCACAGAG
CCAGAATTCTGACCGCCGCTAGAGAGATGCTGCATTCCCCTCTCCCTTGTACCGGAGGCAAGCCTAGCGGAGACACCCCC
GACGTGTTCATCAGCTATCGTAGAAACAGCGGAAGCCAGCTGGCCTCTTTACTGAAGGTCCATTTACAGCTGCACGGATT
TAGCGTCTTCATCGACGTGGAGAAACTGGAGGCTGGCAAGTTCGAGGACAAGCTGATCCAGTCCGTGATGGGCGCTAGGA
ATTTCGTTTTAGTGCTCAGCCCCGGCGCTCTGGATAAATGCATGCAAGATCATGACTGTAAGGACTGGGTCCACAAGGAA
ATCGTGACCGCTCTGTCTTGTGGCAAGAACATCGTCCCCATCATCGACGGCTTCGAATGGCCCGAGCCTCAAGTTCTCCC
CGAAGATATGCAAGCTGTTTTAACCTTCAATGGAATCAAGTGGAGCCACGAGTACCAAGAAGCCACAATCGAGAAGATCA
TTCGTTTTCTGCAAGGTAGATCCTCCAGAGATTCCTCCGCTGGCAGCGACACATCTTTAGAGGGCGCCGCCCCTATGGGT
CCTACCTAATAATctagAAGTTGTCTCCTCCTGCACTGACTGACTGATACAATCGATTTCTGGATCCGCAGGCCTCTGCT
AGCTTGACTGACTGAGATACAGCGTACCTTCAGCTCACAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAAC
TAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATA
AACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGGTGTGGGAGGTTTTTTAAAGCAAGTAA
AACCTCTACAAATGTGGTATTGGCCCATCTCTATCGGTATCGTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGG
GGTTTTTTGTGCCCCTCGGGCCGGATTGCTATCTACCGGCATTGGCGCAGAAAAAAATGCCTGATGCGACGCTGCGCGTC
TTATACTCCCACATATGCCAGATTCAGCAACGGATACGGCTTCCCCAACTTGCCCACTTCCATACGTGTCCTCCTTACCA
GAAATTTATCCTTAAGGTCGTCAGCTATCCTGCAGGCGATCTCTCGATTTCGATCAAGACATTCCTTTAATGGTCTTTTC
TGGACACCACTAGGGGTCAGAAGTAGTTCATCAAACTTTCTTCCCTCCCTAATCTCATTGGTTACCTTGGGCTATCGAAA
CTTAATTAACCAGTCAAGTCAGCTACTTGGCGAGATCGACTTGTCTGGGTTTCGACTACGCTCAGAATTGCGTCAGTCAA
GTTCGATCTGGTCCTTGCTATTGCACCCGTTCTCCGATTACGAGTTTCATTTAAATCATGTGAGCAAAAGGCCAGCAAAA
GGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGAC
GCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCT
CCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACG
CTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCT
GCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAAC
AGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGAAC
AGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCA
CCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATCTCAAGAAGATCCTTTGATC
TTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTT
CACCTAGATCCTTTTAAATTAAAAATGAAGTTTTAAATCAATCTAAAGTATATATGAGTAAACTTGGTCTGACAGTTACC
AATGCTTAATCAGTGAGGCACCTATCTCAGCGATCTGTCTATTTCGTTCATCCATAGTTGCATTTAAATTTCCGAACTCT
CCAAGGCCCTCGTCGGAAAATCTTCAAACCTTTCGTCCGATCCATCTTGCAGGCTACCTCTCGAACGAACTATCGCAAGT
CTCTTGGCCGGCCTTGCGCCTTGGCTATTGCTTGGCAGCGCCTATCGCCAGGTATTACTCCAATCCCGAATATCCGAGAT
CGGGATCACCCGAGAGAAGTTCAACCTACATCCTCAATCCCGATCTATCCGAGATCCGAGGAATATCGAAATCGGGGCGC
GCCTGGTGTACCGAGAACGATCCTCTCAGTGCGAGTCTCGACGATCCATATCGTTGCTTGGCAGTCAGCCAGTCGGAATC
CAGCTTGGGACCCAGGAAGTCCAATCGTCAGATATTGTACTCAAGCCTGGTCACGGCAGCGTACCGATCTGTTTAAACCT
AGATATTGATAGTCTGATCGGTCAACGTATAATCGAGTCCTAGCTTTTGCAAACATCTATCAAGAGACAGGATCAGCAGG
AGGCTTTCGCATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTC
ACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCGCGAGTGGGTTACATCGAACTGGATCTCAAC
AGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGCTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATGTGGCGC
GGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTATT
CACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC
ACTGCGGCCAACTTACTTCTGACAACGATTGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGT
AACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAA
TGGCAACAACCTTGCGTAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAGTTGATAGACTGGATGGAG
GCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGA
GCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGA
GTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAACCGATTCTA
GGTGCATTGGCGCAGAAAAAAATGCCTGATGCGACGCTGCGCGTCTTATACTCCCACATATGCCAGATTCAGCAACGGAT
ACGGCTTCCCCAACTTGCCCACTTCCATACGTGTCCTCCTTACCAGAAATTTATCCTTAAGATCCCGAATCGTTTAAACT
CGACTCTGGCTCTATCGAATCTCCGTCGTTTCGAGCTTACGCGAACAGCCGTGGCGCTCATTTGCTCGTCGGGCATCGAA
TCTCGTCAGCTATCGTCAGCTTACCTTTTTGGCA(配列番号1)。
酵素アッセイは、DulbeccoのPBS緩衝液中の384ウェルポリプロピレンプレートで、20μLの最終アッセイ容量で実施した。最終濃度5μg/mLのARM-SAM-TIR溶解物を、室温で2時間にわたって1%DMSO最終アッセイ濃度でそれぞれの化合物とプレインキュベートした。基質として5μMの最終アッセイ濃度のNAD+を添加することにより反応を開始した。2時間の室温インキュベーション後、アセトニトリル中の7.5%トリクロロ酢酸の停止溶液40μLで反応を停止させた。NAD+およびADPR濃度は、API4000トリプル四重極質量分析計(AB Sciex Framingham、MA)を使用して、RapidFire高スループット質量分析システム(Agilent Technologies、Santa Clara,CA)によって分析された。
Claims (25)
- 式I
式中、
Xが、NまたはC-Rxであり、
Rxが、水素、ハロゲン、および任意選択的に置換されたC1-6脂肪族からなる群から選択され、
Raが、水素、ハロゲン、CN、CF3、C1-3脂肪族、および-C(O)N(Ra*)2からなる群から選択され、
Ra*が、水素およびC1-3脂肪族から選択され、
R1が、水素;ハロゲン;N(R)2;OR;C1-6脂肪族;窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する3~7員の単環式複素環;窒素、酸素、および硫黄から独立して選択される1~3個のヘテロ原子を有する5~6員のヘテロアリール環;ならびに窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する7~8員の架橋二環式複素環からなる群から選択され、C1-6脂肪族、単環式または架橋二環式複素環、およびヘテロアリール環の各々が、1~3個のR1*基で任意選択的に置換されており、
R1*が、オキソ、ハロゲン、N(R)2、OR、C(O)R、S(O)2R、C(O)OR、C(O)N(R)2、任意選択的に置換されたC1~6脂肪族、ならびに窒素、酸素、および硫黄から独立して選択される1~3個のヘテロ原子を有する任意選択的に置換された5~6員のヘテロアリール環から選択され、
Rが、水素、任意選択的に置換されたC1-6脂肪族、ならびに窒素、酸素、および硫黄から独立して選択される0~2個のヘテロ原子を有する任意選択的に置換された3~7員の飽和単環式環からなる群から選択されるか、または:
2つのR基が、それらが結合している窒素原子と一緒になって、窒素、酸素、または硫黄から選択される0~1個の追加のヘテロ原子を含む任意選択的に置換された3~6員の複素環を形成し、
R2が、水素、ハロゲン、S(O)2R、C(O)OR、C(O)N(R)2、ならびに任意選択的に置換されている基であって、C1~6脂肪族;窒素、酸素、および硫黄から独立して選択される1~2個のヘテロ原子を有する3~7員の複素環;ならびに窒素、酸素、および硫黄から独立して選択される1~3個のヘテロ原子を有する5~6員のヘテロアリール環から選択される、任意選択的に置換されている基、からなる群から選択され、
R3が、水素、ハロゲン、CN、CF3、C1-3脂肪族、および-C(O)N(Ra*)2からなる群から選択される、化合物、またはその医薬的に許容される塩。 - Raが、CNである、請求項1に記載の化合物。
- Rxが、ハロゲンである、請求項3に記載の化合物。
- Rxが、水素である、請求項3に記載の化合物。
- R1が、N(R)2である、請求項1~6のいずれか一項に記載の化合物。
- 各Rが、水素である、請求項8に記載の化合物。
- 各Rが、-CH3である、請求項8に記載の化合物。
- R1が、-NHCH3である、請求項8に記載の化合物。
- R1が、-ORである、請求項1~6のいずれか一項に記載の化合物。
- Rが、水素である、請求項14に記載の化合物。
- Rが、-CH3である、請求項14に記載の化合物。
- R2が、ハロゲンである、請求項1~16のいずれか一項に記載の化合物。
- R2が、クロロである、請求項17に記載の化合物。
- R2が、ブロモである、請求項17に記載の化合物。
- R2が、フルオロである、請求項17に記載の化合物。
- R2が、-CH3である、請求項1~20のいずれか一項に記載の化合物。
- R2が、水素である、請求項1~20のいずれか一項に記載の化合物。
- R3が、水素である、請求項1~22のいずれか一項に記載の化合物。
- R3が、ハロゲンである、請求項1~22のいずれか一項に記載の化合物。
- R3が、クロロである、請求項24に記載の化合物。
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EP4028013A1 (en) | 2022-07-20 |
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