JP2020533612A - プロテオミクス用のマルチプレックスビーズアレイ - Google Patents
プロテオミクス用のマルチプレックスビーズアレイ Download PDFInfo
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- JP2020533612A JP2020533612A JP2020536501A JP2020536501A JP2020533612A JP 2020533612 A JP2020533612 A JP 2020533612A JP 2020536501 A JP2020536501 A JP 2020536501A JP 2020536501 A JP2020536501 A JP 2020536501A JP 2020533612 A JP2020533612 A JP 2020533612A
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- different
- target
- reaction site
- scavenger
- bead array
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
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Classifications
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
- G01N33/6842—Proteomic analysis of subsets of protein mixtures with reduced complexity, e.g. membrane proteins, phosphoproteins, organelle proteins
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/543—Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals
- G01N33/54306—Solid-phase reaction mechanisms
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/543—Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals
- G01N33/54313—Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals the carrier being characterised by its particulate form
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
- G01N33/6845—Methods of identifying protein-protein interactions in protein mixtures
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
- G01N33/6848—Methods of protein analysis involving mass spectrometry
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/6854—Immunoglobulins
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/6878—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids in epitope analysis
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2440/00—Post-translational modifications [PTMs] in chemical analysis of biological material
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2570/00—Omics, e.g. proteomics, glycomics or lipidomics; Methods of analysis focusing on the entire complement of classes of biological molecules or subsets thereof, i.e. focusing on proteomes, glycomes or lipidomes
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N27/00—Investigating or analysing materials by the use of electric, electrochemical, or magnetic means
- G01N27/72—Investigating or analysing materials by the use of electric, electrochemical, or magnetic means by investigating magnetic variables
- G01N27/74—Investigating or analysing materials by the use of electric, electrochemical, or magnetic means by investigating magnetic variables of fluids
- G01N27/745—Investigating or analysing materials by the use of electric, electrochemical, or magnetic means by investigating magnetic variables of fluids for detecting magnetic beads used in biochemical assays
Landscapes
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Engineering & Computer Science (AREA)
- Immunology (AREA)
- Molecular Biology (AREA)
- Chemical & Material Sciences (AREA)
- Biomedical Technology (AREA)
- Urology & Nephrology (AREA)
- Hematology (AREA)
- Physics & Mathematics (AREA)
- Biochemistry (AREA)
- Analytical Chemistry (AREA)
- Pathology (AREA)
- General Physics & Mathematics (AREA)
- General Health & Medical Sciences (AREA)
- Cell Biology (AREA)
- Microbiology (AREA)
- Biotechnology (AREA)
- Food Science & Technology (AREA)
- Medicinal Chemistry (AREA)
- Bioinformatics & Computational Biology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Biophysics (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Other Investigation Or Analysis Of Materials By Electrical Means (AREA)
- Investigating Or Analysing Biological Materials (AREA)
- Electrochemistry (AREA)
- Investigating, Analyzing Materials By Fluorescence Or Luminescence (AREA)
- Peptides Or Proteins (AREA)
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201762555235P | 2017-09-07 | 2017-09-07 | |
| US62/555,235 | 2017-09-07 | ||
| PCT/US2018/049995 WO2019051254A1 (en) | 2017-09-07 | 2018-09-07 | MULTIPLEXED BALL NETWORKS FOR PROTÉOMICS |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| JP2020533612A true JP2020533612A (ja) | 2020-11-19 |
| JP2020533612A5 JP2020533612A5 (https=) | 2021-10-14 |
Family
ID=65517929
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2020536501A Pending JP2020533612A (ja) | 2017-09-07 | 2018-09-07 | プロテオミクス用のマルチプレックスビーズアレイ |
Country Status (8)
| Country | Link |
|---|---|
| US (2) | US11391729B2 (https=) |
| EP (1) | EP3679372A4 (https=) |
| JP (1) | JP2020533612A (https=) |
| KR (1) | KR20200051699A (https=) |
| CN (1) | CN111263886A (https=) |
| AU (1) | AU2018327347A1 (https=) |
| CA (1) | CA3073832A1 (https=) |
| WO (1) | WO2019051254A1 (https=) |
Families Citing this family (10)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US9618520B2 (en) | 2013-04-25 | 2017-04-11 | Vladislav B. Bergo | Microarray compositions and methods of their use |
| AU2018327347A1 (en) | 2017-09-07 | 2020-03-19 | Adeptrix Corp. | Multiplexed bead arrays for proteomics |
| GB2607197B (en) * | 2018-06-06 | 2023-04-26 | Bruker Daltonics Gmbh & Co Kg | Targeted protein characterization by mass spectrometry |
| US11639938B2 (en) | 2019-07-19 | 2023-05-02 | Adeptrix Corp. | Multiplexed bead-based analytical assays |
| WO2021127532A1 (en) * | 2019-12-19 | 2021-06-24 | Adeptrix Corp. | Bead-based assays for protein analysis |
| WO2021174075A1 (en) | 2020-02-27 | 2021-09-02 | Adeptrix Corp. | Multiplexed bead-based analytical assays |
| WO2022047198A1 (en) * | 2020-08-31 | 2022-03-03 | Applied Materials, Inc. | Methods of mfish using alignment beads |
| WO2023239622A1 (en) * | 2022-06-08 | 2023-12-14 | Purdue Research Foundation | High-throughput mass spectrometry imaging with dynamic sparse sampling |
| CN116337567B (zh) * | 2023-03-15 | 2025-12-23 | 北京大学 | 一种快速高效的化学蛋白质组学样品制备方法 |
| CN119673289B (zh) * | 2024-11-01 | 2025-11-21 | 华南理工大学 | 基于机器学习的re分析和fticrms联合数据解码与优化方法 |
Citations (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US7846748B2 (en) * | 2002-12-02 | 2010-12-07 | The University Of North Carolina At Chapel Hill | Methods of quantitation and identification of peptides and proteins |
| US20120202709A1 (en) * | 2011-02-09 | 2012-08-09 | Adeptrix Corp. | Devices and Methods for Producing and Analyzing Microarrays |
| US20140323330A1 (en) * | 2013-04-25 | 2014-10-30 | Vladislav B. Bergo | Microarray compositions and methods of their use |
Family Cites Families (38)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| IL65131A0 (en) * | 1982-02-28 | 1982-04-30 | Yeda Res & Dev | Process for the production of agarose-polyaldehyde beads and their biological applications |
| US7622294B2 (en) | 1997-03-14 | 2009-11-24 | Trustees Of Tufts College | Methods for detecting target analytes and enzymatic reactions |
| US6284197B1 (en) | 1998-06-05 | 2001-09-04 | The Regents Of The University Of California | Optical amplification of molecular interactions using liquid crystals |
| EP1090293B2 (en) | 1998-06-24 | 2019-01-23 | Illumina, Inc. | Decoding of array sensors with microspheres |
| EP1190100B1 (en) | 1999-05-20 | 2012-07-25 | Illumina, Inc. | Combinatorial decoding of random nucleic acid arrays |
| GB0022978D0 (en) * | 2000-09-19 | 2000-11-01 | Oxford Glycosciences Uk Ltd | Detection of peptides |
| US7439056B2 (en) | 2000-11-08 | 2008-10-21 | Surface Logix Inc. | Peelable and resealable devices for arraying materials |
| WO2003092581A2 (en) | 2001-07-16 | 2003-11-13 | Hk Pharmaceuticals, Inc. | Capture compounds, collections thereof and methods for analyzing the proteome and complex compositions |
| US7332328B2 (en) | 2001-09-07 | 2008-02-19 | Corning Incorporated | Microcolumn-platform based array for high-throughput analysis |
| US20060014212A1 (en) | 2002-05-10 | 2006-01-19 | Epitome Biosystems, Inc. | Proteome epitope tags and methods of use thereof in protein modification analysis |
| AU2002950953A0 (en) | 2002-08-23 | 2002-09-12 | Genera Biosystems Pty Ltd | Coded nucleic acid carriers |
| AU2004262301A1 (en) | 2003-07-25 | 2005-02-10 | Platypus Technologies, Llc | Liquid crystal based analyte detection |
| EP1774033A4 (en) | 2004-06-10 | 2008-04-23 | Perkinelmer Las Inc | MULTIPLEX ASSAYS FOR DETECTION OF ANALYTES |
| US20090071827A1 (en) * | 2004-08-31 | 2009-03-19 | Research Triangle Institute | Method and apparatus to reduce false positive and false negative identifications of compounds |
| US20060234251A1 (en) | 2005-04-19 | 2006-10-19 | Lumigen, Inc. | Methods of enhancing isolation of RNA from biological samples |
| WO2007000669A2 (en) | 2005-06-07 | 2007-01-04 | Centre National De La Recherche Scientifique (Cnrs) | Use of conjugates with linkers cleavable by photodissociation or fragmentation for mass spectrometry analysis of tissue sections |
| WO2007014267A2 (en) | 2005-07-26 | 2007-02-01 | Oregon Health & Science University | Nanoparticle probes for capture, sorting and placement of targets |
| US7855057B2 (en) * | 2006-03-23 | 2010-12-21 | Millipore Corporation | Protein splice variant/isoform discrimination and quantitative measurements thereof |
| CN100402551C (zh) * | 2006-04-14 | 2008-07-16 | 中国科学院长春应用化学研究所 | β2-微球蛋白的抗原表位及应用 |
| JP4866462B2 (ja) | 2006-08-03 | 2012-02-01 | ナショナル ユニバーシティ オブ シンガポール | マイクロアレイシステム、およびマイクロアレイの製造方法 |
| CN101529251B (zh) | 2006-11-01 | 2014-04-02 | 贝克曼考尔特公司 | 用于亲合分析的结合性表面 |
| US20080254481A1 (en) * | 2006-11-13 | 2008-10-16 | Invitrogen Corporation | Methods and kits for detecting prostate cancer biomarkers |
| CN101293191B (zh) * | 2007-04-25 | 2011-11-09 | 中国科学院过程工程研究所 | 一种琼脂糖凝胶微球的制备方法 |
| US20090286286A1 (en) | 2007-11-06 | 2009-11-19 | Ambergen , Inc. | Methods for controlling amplification |
| US20090270278A1 (en) | 2007-11-06 | 2009-10-29 | Ambergen, Inc. | Methods and compounds for making arrays |
| US20110312897A1 (en) | 2008-09-17 | 2011-12-22 | The Rockefeller University | Cathepsin l proteolytically processes histone h3 during mouse embryonic stem cell differentiation |
| EP2389455A4 (en) | 2009-01-26 | 2012-12-05 | Verinata Health Inc | METHODS AND COMPOSITIONS FOR IDENTIFYING A FETAL CELL |
| EP2401388A4 (en) | 2009-02-23 | 2012-12-05 | Univ Georgetown | SPECIFIC SEQUENCE SEQUENCE DETECTION OF NUCLEOTIDE SEQUENCES |
| WO2011050009A1 (en) | 2009-10-19 | 2011-04-28 | Rational Biotechnology Inc. | Method, device and apparatus for inducing self-adjusting cell electroporation |
| CN103026232B (zh) | 2010-03-01 | 2015-02-04 | 匡特里克斯公司 | 扩大用于检测分子或颗粒的测定法中的动态范围的方法和系统 |
| US8236574B2 (en) | 2010-03-01 | 2012-08-07 | Quanterix Corporation | Ultra-sensitive detection of molecules or particles using beads or other capture objects |
| US9523680B2 (en) | 2010-06-30 | 2016-12-20 | Ambergen, Inc. | Global Proteomic screening of random bead arrays using mass spectrometry imaging |
| CA2808485C (en) * | 2010-08-19 | 2019-02-26 | Erasmus University Medical Center Rotterdam | Methods and means for characterizing antibiotic resistance in microorganisms |
| GB201212902D0 (en) * | 2012-07-20 | 2012-09-05 | Univ Singapore | Combinatoric encoding methods for microarrays |
| US11371994B2 (en) * | 2013-09-13 | 2022-06-28 | California Institute Of Technology | Phosphorylated Akt-specific capture agents, compositions, and methods of using and making |
| US20150253341A1 (en) | 2014-02-10 | 2015-09-10 | Merck Sharp & Dohme Corp. | Quantification of tau in biological samples by immunoaffinity enrichment and mass spectrometry |
| AU2018327347A1 (en) | 2017-09-07 | 2020-03-19 | Adeptrix Corp. | Multiplexed bead arrays for proteomics |
| US11639938B2 (en) | 2019-07-19 | 2023-05-02 | Adeptrix Corp. | Multiplexed bead-based analytical assays |
-
2018
- 2018-09-07 AU AU2018327347A patent/AU2018327347A1/en not_active Abandoned
- 2018-09-07 US US16/125,164 patent/US11391729B2/en active Active
- 2018-09-07 CA CA3073832A patent/CA3073832A1/en not_active Abandoned
- 2018-09-07 WO PCT/US2018/049995 patent/WO2019051254A1/en not_active Ceased
- 2018-09-07 CN CN201880067345.5A patent/CN111263886A/zh active Pending
- 2018-09-07 JP JP2020536501A patent/JP2020533612A/ja active Pending
- 2018-09-07 KR KR1020207009618A patent/KR20200051699A/ko not_active Withdrawn
- 2018-09-07 EP EP18853911.8A patent/EP3679372A4/en not_active Withdrawn
-
2022
- 2022-06-13 US US17/838,666 patent/US20220381774A1/en not_active Abandoned
Patent Citations (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US7846748B2 (en) * | 2002-12-02 | 2010-12-07 | The University Of North Carolina At Chapel Hill | Methods of quantitation and identification of peptides and proteins |
| US20120202709A1 (en) * | 2011-02-09 | 2012-08-09 | Adeptrix Corp. | Devices and Methods for Producing and Analyzing Microarrays |
| US20140323330A1 (en) * | 2013-04-25 | 2014-10-30 | Vladislav B. Bergo | Microarray compositions and methods of their use |
Non-Patent Citations (1)
| Title |
|---|
| CAMMARATA, J. E. ET AL.: "An Affinity Capture MALDI TOF MS Method for High Density Multiplexed Profiling of Total and PTM Prot", PROCEEDINGS OF AMERICAN SOCIETY FOR MASS SPECTROMETRY 64TH ANNUAL MEETING, JPN6022037541, 2016, pages 1, ISSN: 0004995610 * |
Also Published As
| Publication number | Publication date |
|---|---|
| CN111263886A (zh) | 2020-06-09 |
| CA3073832A1 (en) | 2019-03-14 |
| AU2018327347A1 (en) | 2020-03-19 |
| EP3679372A4 (en) | 2021-06-02 |
| WO2019051254A1 (en) | 2019-03-14 |
| US11391729B2 (en) | 2022-07-19 |
| EP3679372A1 (en) | 2020-07-15 |
| KR20200051699A (ko) | 2020-05-13 |
| US20220381774A1 (en) | 2022-12-01 |
| US20190072546A1 (en) | 2019-03-07 |
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