JP2019503182A5 - - Google Patents
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- Publication number
- JP2019503182A5 JP2019503182A5 JP2018536830A JP2018536830A JP2019503182A5 JP 2019503182 A5 JP2019503182 A5 JP 2019503182A5 JP 2018536830 A JP2018536830 A JP 2018536830A JP 2018536830 A JP2018536830 A JP 2018536830A JP 2019503182 A5 JP2019503182 A5 JP 2019503182A5
- Authority
- JP
- Japan
- Prior art keywords
- genomic material
- sample
- homogenized
- extracted
- capture
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Granted
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- 238000000034 method Methods 0.000 claims 15
- 239000000463 material Substances 0.000 claims 14
- 230000003321 amplification Effects 0.000 claims 8
- 238000003199 nucleic acid amplification method Methods 0.000 claims 8
- 210000001165 lymph node Anatomy 0.000 claims 6
- 206010028980 Neoplasm Diseases 0.000 claims 5
- 238000012163 sequencing technique Methods 0.000 claims 5
- 238000000265 homogenisation Methods 0.000 claims 2
- 239000011324 bead Substances 0.000 claims 1
- 210000004027 cell Anatomy 0.000 claims 1
- 238000002360 preparation method Methods 0.000 claims 1
- 238000010008 shearing Methods 0.000 claims 1
Priority Applications (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| JP2021110459A JP7379418B2 (ja) | 2016-01-15 | 2021-07-02 | 腫瘍のディープシークエンシングプロファイリング |
Applications Claiming Priority (5)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201662279126P | 2016-01-15 | 2016-01-15 | |
| US62/279,126 | 2016-01-15 | ||
| US201662415952P | 2016-11-01 | 2016-11-01 | |
| US62/415,952 | 2016-11-01 | ||
| PCT/US2016/060835 WO2017123316A1 (en) | 2016-01-15 | 2016-11-07 | Deep sequencing profiling of tumors |
Related Child Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2021110459A Division JP7379418B2 (ja) | 2016-01-15 | 2021-07-02 | 腫瘍のディープシークエンシングプロファイリング |
Publications (3)
| Publication Number | Publication Date |
|---|---|
| JP2019503182A JP2019503182A (ja) | 2019-02-07 |
| JP2019503182A5 true JP2019503182A5 (https=) | 2019-12-05 |
| JP7232643B2 JP7232643B2 (ja) | 2023-03-03 |
Family
ID=57396824
Family Applications (2)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2018536830A Active JP7232643B2 (ja) | 2016-01-15 | 2016-11-07 | 腫瘍のディープシークエンシングプロファイリング |
| JP2021110459A Active JP7379418B2 (ja) | 2016-01-15 | 2021-07-02 | 腫瘍のディープシークエンシングプロファイリング |
Family Applications After (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2021110459A Active JP7379418B2 (ja) | 2016-01-15 | 2021-07-02 | 腫瘍のディープシークエンシングプロファイリング |
Country Status (12)
| Country | Link |
|---|---|
| US (2) | US11649492B2 (https=) |
| EP (1) | EP3402896B1 (https=) |
| JP (2) | JP7232643B2 (https=) |
| KR (1) | KR102398465B1 (https=) |
| CN (1) | CN108463559A (https=) |
| AU (1) | AU2016386032B2 (https=) |
| CA (1) | CA3011342C (https=) |
| IL (1) | IL260304B2 (https=) |
| SA (1) | SA518392005B1 (https=) |
| SG (1) | SG11201805600VA (https=) |
| WO (1) | WO2017123316A1 (https=) |
| ZA (1) | ZA201804322B (https=) |
Families Citing this family (12)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| ES2986436T3 (es) | 2011-04-15 | 2024-11-11 | Univ Johns Hopkins | Sistema de secuenciación segura |
| ES2886507T5 (es) | 2012-10-29 | 2024-11-15 | Univ Johns Hopkins | Prueba de Papanicolaou para cánceres de ovario y de endometrio |
| US11286531B2 (en) | 2015-08-11 | 2022-03-29 | The Johns Hopkins University | Assaying ovarian cyst fluid |
| SG11201805600VA (en) * | 2016-01-15 | 2018-07-30 | Ventana Med Syst Inc | Deep sequencing profiling of tumors |
| CN111868260B (zh) | 2017-08-07 | 2025-02-21 | 约翰斯霍普金斯大学 | 用于评估和治疗癌症的方法和材料 |
| US20200004928A1 (en) | 2018-06-29 | 2020-01-02 | Roche Sequencing Solutions, Inc. | Computing device with improved user interface for interpreting and visualizing data |
| CN109234356B (zh) * | 2018-09-18 | 2021-10-08 | 南京迪康金诺生物技术有限公司 | 一种构建杂交捕获测序文库的方法及应用 |
| CN113383089A (zh) * | 2018-11-29 | 2021-09-10 | 文塔纳医疗系统公司 | 经由代表性DNA测序进行个性化ctDNA疾病监测 |
| WO2020136133A1 (en) | 2018-12-23 | 2020-07-02 | F. Hoffmann-La Roche Ag | Tumor classification based on predicted tumor mutational burden |
| WO2020249704A1 (en) | 2019-06-13 | 2020-12-17 | F. Hoffmann-La Roche Ag | Systems and methods with improved user interface for interpreting and visualizing longitudinal data |
| EP4103748A4 (en) | 2020-02-14 | 2024-03-13 | The Johns Hopkins University | METHOD AND MATERIALS FOR ASSESSING NUCLEIC ACIDS |
| JPWO2022244856A1 (https=) | 2021-05-20 | 2022-11-24 |
Family Cites Families (21)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US4000159A (en) | 1974-06-28 | 1976-12-28 | Phillips Petroleum Company | Preparation of n,n-disubstituted thioamides |
| US5176995A (en) | 1985-03-28 | 1993-01-05 | Hoffmann-La Roche Inc. | Detection of viruses by amplification and hybridization |
| US4683202A (en) | 1985-03-28 | 1987-07-28 | Cetus Corporation | Process for amplifying nucleic acid sequences |
| US4965188A (en) | 1986-08-22 | 1990-10-23 | Cetus Corporation | Process for amplifying, detecting, and/or cloning nucleic acid sequences using a thermostable enzyme |
| US4683195A (en) | 1986-01-30 | 1987-07-28 | Cetus Corporation | Process for amplifying, detecting, and/or-cloning nucleic acid sequences |
| US20080119367A1 (en) * | 2004-12-17 | 2008-05-22 | Mayo Foundation For Medical Education And Research | Prognosis of Renal Cell Carcinoma |
| WO2009061840A1 (en) * | 2007-11-05 | 2009-05-14 | Complete Genomics, Inc. | Methods and oligonucleotide designs for insertion of multiple adaptors employing selective methylation |
| US8592150B2 (en) * | 2007-12-05 | 2013-11-26 | Complete Genomics, Inc. | Methods and compositions for long fragment read sequencing |
| EP2227563B1 (en) | 2007-12-05 | 2012-06-06 | Complete Genomics, Inc. | Efficient base determination in sequencing reactions |
| EP2245198A1 (en) * | 2008-02-04 | 2010-11-03 | Massachusetts Institute of Technology | Selection of nucleic acids by solution hybridization to oligonucleotide baits |
| JP5757572B2 (ja) | 2009-07-03 | 2015-07-29 | 国立大学法人 東京大学 | 癌細胞の存否を判定する方法および癌患者の予後を判定する方法 |
| DK2539450T3 (da) * | 2010-02-25 | 2016-05-30 | Advanced Liquid Logic Inc | Fremgangsmåde til fremstilling af nukleinsyrebiblioteker |
| EP2606154B1 (en) * | 2010-08-20 | 2019-09-25 | Integenx Inc. | Integrated analysis system |
| KR102759126B1 (ko) * | 2010-12-30 | 2025-01-24 | 파운데이션 메디신 인코포레이티드 | 종양 샘플의 다유전자 분석의 최적화 |
| GB2497510A (en) | 2011-11-10 | 2013-06-19 | Harry Cuppens | Methods for determining mononucleotide sequence repeats |
| US10138519B2 (en) | 2012-12-28 | 2018-11-27 | Quest Diagnostics Investments Incorporated | Universal sanger sequencing from next-gen sequencing amplicons |
| EP2971122B1 (en) * | 2013-03-15 | 2020-08-26 | Memorial Sloan Kettering Cancer Center | Biomarkers for response to rapamycin analogs |
| US20140278461A1 (en) | 2013-03-15 | 2014-09-18 | Memorial Sloan-Kettering Cancer Center | System and method for integrating a medical sequencing apparatus and laboratory system into a medical facility |
| KR20160062763A (ko) | 2013-10-18 | 2016-06-02 | 세븐 브릿지스 지노믹스 인크. | 유전자 샘플을 유전자형 결정하기 위한 방법 및 시스템 |
| US10415083B2 (en) * | 2013-10-28 | 2019-09-17 | The Translational Genomics Research Institute | Long insert-based whole genome sequencing |
| SG11201805600VA (en) * | 2016-01-15 | 2018-07-30 | Ventana Med Syst Inc | Deep sequencing profiling of tumors |
-
2016
- 2016-11-07 SG SG11201805600VA patent/SG11201805600VA/en unknown
- 2016-11-07 AU AU2016386032A patent/AU2016386032B2/en active Active
- 2016-11-07 CA CA3011342A patent/CA3011342C/en active Active
- 2016-11-07 CN CN201680078974.9A patent/CN108463559A/zh active Pending
- 2016-11-07 WO PCT/US2016/060835 patent/WO2017123316A1/en not_active Ceased
- 2016-11-07 EP EP16801647.5A patent/EP3402896B1/en active Active
- 2016-11-07 IL IL260304A patent/IL260304B2/en unknown
- 2016-11-07 JP JP2018536830A patent/JP7232643B2/ja active Active
- 2016-11-07 KR KR1020187023352A patent/KR102398465B1/ko active Active
-
2018
- 2018-06-27 ZA ZA2018/04322A patent/ZA201804322B/en unknown
- 2018-07-11 SA SA518392005A patent/SA518392005B1/ar unknown
- 2018-07-13 US US16/034,392 patent/US11649492B2/en active Active
-
2021
- 2021-07-02 JP JP2021110459A patent/JP7379418B2/ja active Active
-
2023
- 2023-04-06 US US18/131,577 patent/US20230250476A1/en active Pending
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