JP2016523511A5 - - Google Patents

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JP2016523511A5
JP2016523511A5 JP2016506657A JP2016506657A JP2016523511A5 JP 2016523511 A5 JP2016523511 A5 JP 2016523511A5 JP 2016506657 A JP2016506657 A JP 2016506657A JP 2016506657 A JP2016506657 A JP 2016506657A JP 2016523511 A5 JP2016523511 A5 JP 2016523511A5
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pairs
indicator
region
cancer cells
loh
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JP2016506657A
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JP6625045B2 (ja
JP2016523511A (ja
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Priority claimed from PCT/US2014/033014 external-priority patent/WO2014165785A2/en
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Priority to JP2019085187A priority Critical patent/JP7522539B2/ja
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JP2016506657A 2013-04-05 2014-04-04 相同組換え欠損を評価するための方法および材料 Active JP6625045B2 (ja)

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Application Number Priority Date Filing Date Title
JP2019085187A JP7522539B2 (ja) 2013-04-05 2019-04-26 相同組換え欠損を評価するための方法および材料

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US201361809105P 2013-04-05 2013-04-05
US61/809,105 2013-04-05
US201361913762P 2013-12-09 2013-12-09
US61/913,762 2013-12-09
PCT/US2014/033014 WO2014165785A2 (en) 2013-04-05 2014-04-04 Methods and materials for assessing homologous recombination deficiency

Related Child Applications (1)

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JP2019085187A Division JP7522539B2 (ja) 2013-04-05 2019-04-26 相同組換え欠損を評価するための方法および材料

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JP2016523511A JP2016523511A (ja) 2016-08-12
JP2016523511A5 true JP2016523511A5 (https=) 2017-03-16
JP6625045B2 JP6625045B2 (ja) 2019-12-25

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JP2016506657A Active JP6625045B2 (ja) 2013-04-05 2014-04-04 相同組換え欠損を評価するための方法および材料
JP2019085187A Active JP7522539B2 (ja) 2013-04-05 2019-04-26 相同組換え欠損を評価するための方法および材料
JP2020194936A Active JP7522643B2 (ja) 2013-04-05 2020-11-25 相同組換え欠損を評価するための方法および材料
JP2022169085A Active JP7641938B2 (ja) 2013-04-05 2022-10-21 相同組換え欠損を評価するための方法および材料
JP2025027653A Pending JP2025090619A (ja) 2013-04-05 2025-02-25 相同組換え欠損を評価するための方法および材料

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JP2019085187A Active JP7522539B2 (ja) 2013-04-05 2019-04-26 相同組換え欠損を評価するための方法および材料
JP2020194936A Active JP7522643B2 (ja) 2013-04-05 2020-11-25 相同組換え欠損を評価するための方法および材料
JP2022169085A Active JP7641938B2 (ja) 2013-04-05 2022-10-21 相同組換え欠損を評価するための方法および材料
JP2025027653A Pending JP2025090619A (ja) 2013-04-05 2025-02-25 相同組換え欠損を評価するための方法および材料

Country Status (9)

Country Link
US (4) US20140363521A1 (https=)
EP (2) EP2981624B1 (https=)
JP (5) JP6625045B2 (https=)
AU (3) AU2014248007B2 (https=)
CA (1) CA2908745C (https=)
DK (1) DK2981624T3 (https=)
ES (1) ES2777228T3 (https=)
PT (1) PT2981624T (https=)
WO (1) WO2014165785A2 (https=)

Families Citing this family (41)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2012027224A1 (en) 2010-08-24 2012-03-01 Dana-Farber Cancer Institute, Inc. Methods for predicting anti-cancer response
KR102759126B1 (ko) 2010-12-30 2025-01-24 파운데이션 메디신 인코포레이티드 종양 샘플의 다유전자 분석의 최적화
JP6117194B2 (ja) 2011-06-17 2017-04-19 ミリアド・ジェネティックス・インコーポレイテッド アレル不均衡を評価するための方法および材料
BR112014015152A2 (pt) 2011-12-21 2017-07-04 Myriad Genetics Inc métodos e materiais para a avaliação da perda de heterozigosidade
CA2864481C (en) 2012-02-23 2020-07-14 Dana-Farber Cancer Institute, Inc. Methods for predicting anti-cancer response
WO2013182645A1 (en) 2012-06-07 2013-12-12 Institut Curie Methods for detecting inactivation of the homologous recombination pathway (brca1/2) in human tumors
AU2014248007B2 (en) * 2013-04-05 2020-03-26 Myriad Genetics, Inc. Methods and materials for assessing homologous recombination deficiency
WO2015086473A1 (en) 2013-12-09 2015-06-18 Institut Curie Methods for detecting inactivation of the homologous recombination pathway (brca1/2) in human tumors
EP3108246B1 (en) 2014-02-21 2019-10-09 Epic Sciences, Inc. Methods for analyzing rare circulating cells
CA2958801A1 (en) 2014-08-15 2016-02-18 Myriad Genetics, Inc. Methods and materials for assessing homologous recombination deficiency
EP3227464B1 (en) * 2014-12-05 2022-04-20 Foundation Medicine, Inc. Multigene analysis of tumor samples
US20160160294A1 (en) * 2014-12-08 2016-06-09 Tesaro Methods and materials for predicting response to niraparib
WO2016185406A1 (en) 2015-05-19 2016-11-24 Nadathur Estates Pvt. Ltd. Method for identification of a deficient brca1 function
EP3371327B1 (en) * 2015-11-03 2024-12-18 Epic Sciences, Inc. Single cell genomic profiling of circulating tumor cells (ctcs) in metastatic disease to characterize disease heterogeneity
WO2017106365A1 (en) * 2015-12-14 2017-06-22 Myriad Genetics, Inc. Methods for measuring mutation load
US20190025312A1 (en) * 2016-01-06 2019-01-24 Epic Sciences, Inc. Single cell genomic profiling of circulating tumor cells (ctcs) in metastatic disease to characterize disease heterogeneity
WO2017165270A1 (en) * 2016-03-21 2017-09-28 Myriad Genetics, Inc. Homologous recombination deficiency to predict neoadjuvant chemotherapy necessity in bladder cancer
WO2017178509A1 (en) 2016-04-12 2017-10-19 Xentech Methods for predicting sensibility to treatment with parp inhibitors in cancerous patients
JP7224185B2 (ja) * 2016-05-01 2023-02-17 ゲノム・リサーチ・リミテッド Dnaサンプルを特徴付ける方法
GB2555765A (en) 2016-05-01 2018-05-16 Genome Res Ltd Method of detecting a mutational signature in a sample
EP3452937B1 (en) 2016-05-01 2025-10-22 Genome Research Limited Method of characterising a dna sample
SG11201811564QA (en) 2016-06-29 2019-01-30 Tesaro Inc Methods of treating ovarian cancer
BR112020024727A2 (pt) 2018-06-11 2021-03-23 Foundation Medicine, Inc. composições e métodos para avaliação de alterações genômicas
JPWO2020137076A1 (ja) * 2018-12-28 2021-11-11 国立大学法人 東京大学 Parp阻害剤に対する癌の感受性の予測方法および相同組換修復不全を有する癌の検出方法
US10975445B2 (en) 2019-02-12 2021-04-13 Tempus Labs, Inc. Integrated machine-learning framework to estimate homologous recombination deficiency
ES2989374T3 (es) 2019-12-10 2024-11-26 Tempus Ai Inc Sistemas y procedimientos para predecir el estado de deficiencia de recombinación homóloga de una muestra
WO2021122620A1 (en) * 2019-12-16 2021-06-24 Agilent Technologies, Inc. Genomic scarring assays and related methods
EP3945525A1 (en) 2020-07-27 2022-02-02 Sophia Genetics S.A. Methods for identifying chromosomal spatial instability such as homologous repair deficiency in low coverage next-generation sequencing data
CN111883211B (zh) * 2020-08-07 2021-04-23 张哲� 一种表征hrd同源重组修复缺陷的基因瘢痕及鉴定方法
US11718869B2 (en) * 2020-08-12 2023-08-08 Zhenyue Biotechnology Jiangsu Co., Ltd. Method and kit for determining genome instability based on next generation sequencing (NGS)
CN112410423B (zh) * 2020-11-03 2021-08-13 南京世和基因生物技术股份有限公司 同源重组缺失的标志物、检测方法以及检测系统
JP7585015B2 (ja) 2020-12-04 2024-11-18 株式会社東芝 核酸構築物のセット、キット、検出方法及び薬剤効果予測方法
US20240026462A1 (en) * 2021-01-10 2024-01-25 Ying Ja CHEN Homologous recombination deficiency determining method and kit thereof
BE1029144B1 (fr) 2021-02-25 2022-09-20 Oncodna Méthode de caracterisation d'une tumeur à l'aide d'un séquençage ciblé
CN112820351A (zh) * 2021-03-01 2021-05-18 江苏医联生物科技有限公司 检测肿瘤患者的突变和hrd评分指导用药的方法
TW202317774A (zh) * 2021-06-25 2023-05-01 美商方得生醫療公司 分類同源修復缺陷之系統及方法
CN118369439A (zh) * 2021-12-08 2024-07-19 麦利亚德基因公司 用于评估乳腺癌亚型中同源重组缺陷的方法和材料
KR102523938B1 (ko) * 2022-02-04 2023-04-19 가톨릭대학교 산학협력단 상동 재조합 결핍증 예측 모델의 모델링 방법
EP4605937A1 (en) 2022-10-19 2025-08-27 Vib Vzw Method of determining loss of heterozygosity status of a tumor
WO2025078387A1 (en) 2023-10-10 2025-04-17 Vib Vzw Method of detecting loss of heterozygosity status of a tumor
WO2025078404A1 (en) 2023-10-10 2025-04-17 Vib Vzw Methods of determining response of a tumor to dna-damaging agents or to agents inhibiting or impairing dna repair

Family Cites Families (22)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
YU33730B (en) 1967-04-18 1978-02-28 Farmaceutici Italia Process for preparing a novel antibiotic substance and salts thereof
GB1432562A (en) 1972-04-10 1976-04-22 Rustenburg Platinum Mines Ltd Platinum co-ordination compounds
GB1432563A (en) 1972-04-10 1976-04-22 Rustenburg Platinum Mines Ltd Platinum- co-ordination compounds
ES444380A1 (es) 1976-01-16 1977-06-16 Gosalvez Mario Un procedimiento para preparar derivados metalicos antraci- clinicos.
US4950738A (en) 1984-09-13 1990-08-21 Cytogen Corporation Amine derivatives of anthracycline antibiotics
US5977082A (en) 1985-08-02 1999-11-02 Pharmacia & Upjohn Company Injectable ready-to-use solutions containing an antitumor anthracycline glycoside
US5177075A (en) 1988-08-19 1993-01-05 Warner-Lambert Company Substituted dihydroisoquinolinones and related compounds as potentiators of the lethal effects of radiation and certain chemotherapeutic agents; selected compounds, analogs and process
US5295944A (en) 1991-05-14 1994-03-22 Dana-Farber Cancer Institute Method for treating a tumor with ionizing radiation
ATE247471T1 (de) 1991-11-15 2003-09-15 Smithkline Beecham Corp Cisplatin und topotecan enthaltende zusammensetzung als antitumor.
GB9806324D0 (en) 1998-03-24 1998-05-20 Pharmacia & Upjohn Spa Antitumour synergetic composition
JP4323802B2 (ja) 2000-12-01 2009-09-02 エムジーアイ・ジーピー・インコーポレーテッド 化合物およびその使用
GB0121285D0 (en) 2001-09-03 2001-10-24 Cancer Res Ventures Ltd Anti-cancer combinations
WO2005002508A2 (en) 2003-06-11 2005-01-13 Access Pharmaceuticals, Inc. Macromolecular platinum chelates
CN100412084C (zh) 2003-07-02 2008-08-20 獀洛克斯股份有限公司 热稳定的结晶盐酸表柔比星及其制造方法
US7531530B2 (en) 2003-07-25 2009-05-12 Cancer Research Technology Limited Therapeutic compounds
AU2004270655B2 (en) 2003-08-13 2011-03-24 University Of South Florida Methods for inhibiting tumor cell proliferation
ATE488507T1 (de) 2005-06-30 2010-12-15 Bionumerik Pharmaceuticals Inc Platinanaloga mit monoazolligand
KR100925337B1 (ko) * 2009-05-25 2009-11-09 주식회사 마크로젠 염색체 수 이상 검출을 통한 유방암 약물 반응성 예측
EP3012329B1 (en) * 2010-06-18 2017-10-25 Myriad Genetics, Inc. Methods and materials for assessing loss of heterozygosity
WO2012027224A1 (en) * 2010-08-24 2012-03-01 Dana-Farber Cancer Institute, Inc. Methods for predicting anti-cancer response
CA2864481C (en) * 2012-02-23 2020-07-14 Dana-Farber Cancer Institute, Inc. Methods for predicting anti-cancer response
AU2014248007B2 (en) * 2013-04-05 2020-03-26 Myriad Genetics, Inc. Methods and materials for assessing homologous recombination deficiency

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