HK1178210A1 - Single cell classification, screening method and device thereof - Google Patents

Single cell classification, screening method and device thereof

Info

Publication number
HK1178210A1
HK1178210A1 HK13104990.7A HK13104990A HK1178210A1 HK 1178210 A1 HK1178210 A1 HK 1178210A1 HK 13104990 A HK13104990 A HK 13104990A HK 1178210 A1 HK1178210 A1 HK 1178210A1
Authority
HK
Hong Kong
Prior art keywords
single cell
screening method
cell classification
classification
screening
Prior art date
Application number
HK13104990.7A
Other languages
English (en)
Chinese (zh)
Inventor
徐訊鮑莉何偉明侯勇陶曄
Original Assignee
深圳華大基因科技有限公司 廣東省深圳市鹽田區北山路 號 深圳華大基因研究院 廣東省深圳市鹽田區
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Family has litigation
First worldwide family litigation filed litigation Critical https://patents.darts-ip.com/?family=47745956&utm_source=google_patent&utm_medium=platform_link&utm_campaign=public_patent_search&patent=HK1178210(A1) "Global patent litigation dataset” by Darts-ip is licensed under a Creative Commons Attribution 4.0 International License.
Application filed by 深圳華大基因科技有限公司 廣東省深圳市鹽田區北山路 號 深圳華大基因研究院 廣東省深圳市鹽田區 filed Critical 深圳華大基因科技有限公司 廣東省深圳市鹽田區北山路 號 深圳華大基因研究院 廣東省深圳市鹽田區
Publication of HK1178210A1 publication Critical patent/HK1178210A1/xx

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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Biophysics (AREA)
  • Biotechnology (AREA)
  • Analytical Chemistry (AREA)
  • Wood Science & Technology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Genetics & Genomics (AREA)
  • Molecular Biology (AREA)
  • Medical Informatics (AREA)
  • Evolutionary Biology (AREA)
  • Zoology (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
HK13104990.7A 2011-08-25 2013-04-24 Single cell classification, screening method and device thereof HK1178210A1 (en)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
CN201110245356.8A CN102952854B (zh) 2011-08-25 2011-08-25 单细胞分类和筛选方法及其装置

Publications (1)

Publication Number Publication Date
HK1178210A1 true HK1178210A1 (en) 2013-09-06

Family

ID=47745956

Family Applications (1)

Application Number Title Priority Date Filing Date
HK13104990.7A HK1178210A1 (en) 2011-08-25 2013-04-24 Single cell classification, screening method and device thereof

Country Status (5)

Country Link
US (1) US20140206006A1 (xx)
EP (1) EP2749655B2 (xx)
CN (1) CN102952854B (xx)
HK (1) HK1178210A1 (xx)
WO (1) WO2013026411A1 (xx)

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CN104462869B (zh) * 2014-11-28 2017-12-26 天津诺禾致源生物信息科技有限公司 检测体细胞单核苷酸突变的方法和装置
JP6367473B2 (ja) * 2015-04-01 2018-08-01 株式会社東芝 遺伝子型判定装置及び方法
US10395759B2 (en) 2015-05-18 2019-08-27 Regeneron Pharmaceuticals, Inc. Methods and systems for copy number variant detection
CN104978497B (zh) * 2015-06-24 2019-01-29 中国科学院昆明动物研究所 一种大样本高通量生物数据关联分析方法
CN106326689A (zh) * 2015-06-25 2017-01-11 深圳华大基因科技服务有限公司 确定群体中受到选择作用的位点的方法和装置
CN104946765A (zh) * 2015-06-25 2015-09-30 华中农业大学 基于基因组测序的体细胞突变位点挖掘方法
TWI582631B (zh) * 2015-11-20 2017-05-11 財團法人資訊工業策進會 用以分析細菌菌種之定序資料的系統及其方法
CN106909806B (zh) * 2015-12-22 2019-04-09 广州华大基因医学检验所有限公司 定点检测变异的方法和装置
CN105420374B (zh) * 2015-12-22 2019-08-16 武汉菲沙基因信息有限公司 一种诱导全能干细胞应用前期突变检测方法
CN106021994B (zh) * 2016-05-13 2019-03-26 万康源(天津)基因科技有限公司 一种肿瘤突变位点筛选及互斥基因挖掘的方法
CN106021987B (zh) * 2016-05-24 2019-04-09 人和未来生物科技（长沙）有限公司 超低频突变分子标签聚类分群算法
CN109997193B (zh) * 2016-11-10 2023-03-14 深圳华大生命科学研究院 一种对特定群中的亚群进行定量分析的方法
CN106701995B (zh) * 2017-02-20 2019-11-26 元码基因科技（北京）股份有限公司 通过单细胞转录组测序进行细胞质量控制的方法
CN106995845B (zh) * 2017-04-01 2020-05-05 中国科学院遗传与发育生物学研究所 利用三代测序平台（PacBio RS II）进行多倍体中基因等位变异挖掘的方法
WO2018214010A1 (zh) * 2017-05-23 2018-11-29 深圳华大基因研究院 一种基于测序数据的变异检测方法、装置和存储介质
CN110211631B (zh) * 2018-02-07 2024-02-09 深圳先进技术研究院 一种全基因组关联分析方法、系统及电子设备
JP2019195304A (ja) 2018-05-10 2019-11-14 学校法人順天堂 画像解析方法、装置、コンピュータプログラム、及び深層学習アルゴリズムの生成方法
CN108681661B (zh) * 2018-05-16 2022-02-18 杭州迈迪科生物科技有限公司 一种伴随实验生成样本id的方法
CN108920893B (zh) * 2018-09-06 2019-04-16 南京医科大学 一种基于人工智能的颅颌面骨骼和软组织形态预测方法
CN109658981B (zh) * 2018-12-10 2022-10-04 海南大学 一种单细胞测序的数据分类方法
WO2020154885A1 (zh) * 2019-01-29 2020-08-06 北京大学 单细胞类型检测方法、装置、设备和存储介质
CN109949868B (zh) * 2019-03-01 2020-10-16 深圳乐土生物科技有限公司 基于耐受性分析的基因等级排序方法和装置
JP7381003B2 (ja) * 2019-04-26 2023-11-15 学校法人順天堂 疾患解析を支援する方法、装置、及びコンピュータプログラム、並びにコンピュータアルゴリズムを訓練する方法、装置、及びプログラム
CN110504005A (zh) * 2019-08-27 2019-11-26 上海其明信息技术有限公司 数据处理方法
CN112930573A (zh) * 2019-09-02 2021-06-08 北京哲源科技有限责任公司 疾病类型自动确定方法及电子设备
CN110797087B (zh) * 2019-10-17 2020-11-03 南京医基云医疗数据研究院有限公司 测序序列处理方法及装置、存储介质、电子设备
CN110827921B (zh) * 2019-11-12 2022-06-14 玉林师范学院 一种单细胞聚类方法、装置、电子设备及存储介质
CN111105844B (zh) * 2019-11-22 2023-06-06 广州金域医学检验集团股份有限公司 体细胞变异分类方法、装置、设备及可读存储介质
US20230028790A1 (en) * 2019-11-29 2023-01-26 GC Genome Corporation Artificial intelligence-based chromosomal abnormality detection method
CN110993027B (zh) * 2019-12-18 2022-10-11 武汉大学 一种高效克隆植物性状相关突变基因的方法
CN111091867B (zh) * 2019-12-18 2021-11-09 中国科学院大学 基因变异位点筛选方法及系统
CN111681710B (zh) * 2020-06-03 2021-08-27 中国人民解放军军事科学院军事医学研究院 基于基因表达特征的细胞分类方法、装置和电子设备
CN111986731B (zh) * 2020-08-05 2023-08-11 广西大学 一种提高gwas致因突变定位效率的方法
CN111899790A (zh) * 2020-08-17 2020-11-06 天津诺禾医学检验所有限公司 测序数据的处理方法及装置
CN112289379B (zh) * 2020-10-15 2022-11-22 天津诺禾致源生物信息科技有限公司 细胞类型的确定方法、装置、存储介质及电子装置
CN112270957B (zh) * 2020-10-19 2023-11-07 西安邮电大学 高阶snp致病组合数据检测方法、系统、计算机设备
CN112837754B (zh) * 2020-12-25 2022-10-28 北京百奥智汇科技有限公司 一种基于特征基因的单细胞自动分类方法和装置
CN113160886B (zh) * 2021-04-02 2023-04-07 山东大学 基于单细胞Hi-C数据的细胞类型预测系统
CN113223611B (zh) * 2021-04-16 2024-02-20 杭州电子科技大学 一种基于全基因组序列snp数据的快速特征选择方法
CN113674800B (zh) * 2021-08-25 2022-02-08 中国农业科学院蔬菜花卉研究所 基于单细胞转录组测序数据的细胞聚类方法
WO2023157933A1 (ja) * 2022-02-18 2023-08-24 国立研究開発法人理化学研究所 細胞の系統解析を行う方法
CN115394358B (zh) * 2022-08-31 2023-05-12 西安理工大学 基于深度学习的单细胞测序基因表达数据插补方法和系统
GB2622371A (en) * 2022-09-13 2024-03-20 Agecurve Ltd Cell tree rings: Method and cell lineage tree based aging timer for calculating biological age of biological sample
CN116072217B (zh) * 2022-11-02 2023-07-25 杭州联川基因诊断技术有限公司 一种单细胞转录组数据可用性处理方法、介质及设备
CN116230082B (zh) * 2022-12-06 2024-05-14 序科码医学检验实验室(广州)有限公司 基于样品基因型的数据拆分的无标记多样品混合单细胞测序方法
CN115966259B (zh) * 2022-12-26 2023-10-13 南京普恩瑞生物科技有限公司 一种基于逻辑回归建模的样本同源性检测校验方法及系统
CN116486913B (zh) * 2023-05-23 2023-10-03 浙江大学 基于单细胞测序从头预测调控突变的系统、设备和介质
CN117423382B (zh) * 2023-10-21 2024-05-10 云准医药科技(广州)有限公司 一种基于SNP多态性的单细胞barcode身份识别方法
CN117637020B (zh) * 2024-01-25 2024-04-30 鲁东大学 一种基于深度学习的四倍体牡蛎全基因组snp分型方法

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CN101914628B (zh) * 2010-09-02 2013-01-09 深圳华大基因科技有限公司 检测基因组目标区域多态性位点的方法
CN102061526B (zh) * 2010-11-23 2014-04-30 深圳华大基因科技服务有限公司 一种DNA文库及其制备方法、以及一种检测SNPs的方法和装置

Also Published As

Publication number Publication date
EP2749655A4 (en) 2015-01-28
EP2749655A1 (en) 2014-07-02
CN102952854A (zh) 2013-03-06
EP2749655B2 (en) 2022-04-13
EP2749655B1 (en) 2019-07-03
CN102952854B (zh) 2015-01-14
WO2013026411A1 (zh) 2013-02-28
US20140206006A1 (en) 2014-07-24

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